Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:17:13 (358244): wrapper (7.7.26015): starting
18:17:13 (358244): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 18:17:13] Arguments: --nthreads 8
[2025-07-27 18:17:13] Threads: 8
[2025-07-27 18:17:13] Checking for CVMFS
[2025-07-27 18:17:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:17:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:17:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:17:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:17:13] 2.13.1.0 645510 14773 263996 148827 3 18 37094333 40960001 9765 16776704 0 51805148 99.794 41430723 36980 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 18:17:13] CVMFS is ok
[2025-07-27 18:17:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:17:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:17:13] Further information can be found at the LHC@home message board.
[2025-07-27 18:17:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:17:13] Checking for apptainer binary...
[2025-07-27 18:17:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:17:13] Running /usr/bin/apptainer --version
[2025-07-27 18:17:13] apptainer version 1.4.1-1.el9
[2025-07-27 18:17:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:17:13] c-212-5.aglt2.org
[2025-07-27 18:17:14] apptainer works
[2025-07-27 18:17:14] Set ATHENA_PROC_NUMBER=8
[2025-07-27 18:17:14] Set ATHENA_CORE_NUMBER=8
[2025-07-27 18:17:14] Starting ATLAS job with PandaID=6747548520
[2025-07-27 18:17:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:32:40]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:32:40] 2025-07-27 23:31:56,426 | INFO     |  -- lfn=log.45743349._052589.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:32:40] 2025-07-27 23:31:56,426 | INFO     | stage-out finished correctly
[2025-07-27 19:32:40] 2025-07-27 23:31:56,528 | WARNING  | process 369789 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 19:32:40] 2025-07-27 23:31:56,529 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6747548520/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:32:40] 2025-07-27 23:31:56,530 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6747548520/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:32:40] 2025-07-27 23:31:56,532 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3056429 B
[2025-07-27 19:32:40] 2025-07-27 23:31:56,532 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15301 B
[2025-07-27 19:32:40] 2025-07-27 23:31:56,532 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-07-27 19:32:40] 2025-07-27 23:31:56,555 | INFO     | sufficient remaining disk space (124754329600 B)
[2025-07-27 19:32:40] 2025-07-27 23:31:56,556 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-27 19:32:40] 2025-07-27 23:31:56,556 | INFO     | size of work directory /tmp/boinchome/slots/10/PanDA_Pilot-6747548520: 3352912 B (within 2537553920 B limit)
[2025-07-27 19:32:40] 2025-07-27 23:31:56,557 | INFO     | pfn file=/tmp/boinchome/slots/10/PanDA_Pilot-6747548520/HITS.45743349._052589.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-27 19:32:40] 2025-07-27 23:31:56,557 | INFO     | total size of present files: 0 B (workdir size: 3352912 B)
[2025-07-27 19:32:40] 2025-07-27 23:31:56,557 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/10/PanDA_Pilot-6747548520/HITS.45743349._052589.pool.root.1 since it does not exist
[2025-07-27 19:32:40] 2025-07-27 23:31:56,921 | INFO     | number of running child processes to parent process 369789: 1
[2025-07-27 19:32:40] 2025-07-27 23:31:56,922 | INFO     | maximum number of monitored processes: 6
[2025-07-27 19:32:40] 2025-07-27 23:31:58,035 | INFO     | PID=362082 has CPU usage=14.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:32:40] 2025-07-27 23:31:58,035 | INFO     | .. there are 14 such processes running
[2025-07-27 19:32:40] 2025-07-27 23:31:59,426 | INFO     | monitor loop #328: job 0:6747548520 is in state 'finished'
[2025-07-27 19:32:40] 2025-07-27 23:31:59,426 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:32:40] 2025-07-27 23:31:59,811 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:32:40] 2025-07-27 23:32:01,929 | INFO     | monitor loop #329: job 0:6747548520 is in state 'finished'
[2025-07-27 19:32:40] 2025-07-27 23:32:01,929 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:32:40] 2025-07-27 23:32:02,043 | INFO     | job 6747548520 has state=finished
[2025-07-27 19:32:40] 2025-07-27 23:32:02,043 | INFO     | preparing for final server update for job 6747548520 in state='finished'
[2025-07-27 19:32:40] 2025-07-27 23:32:02,044 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:32:40] 2025-07-27 23:32:02,044 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:32:40] 2025-07-27 23:32:02,044 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:32:40] 2025-07-27 23:32:02,044 | INFO     | job 6747548520 has finished - writing final server update
[2025-07-27 19:32:40] 2025-07-27 23:32:02,045 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:32:40] 2025-07-27 23:32:02,045 | INFO     | executing command: lscpu
[2025-07-27 19:32:40] 2025-07-27 23:32:02,123 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:32:40] 2025-07-27 23:32:04,433 | INFO     | monitor loop #330: job 0:6747548520 is in state 'finished'
[2025-07-27 19:32:40] 2025-07-27 23:32:04,435 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:32:40] 2025-07-27 23:32:06,762 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 19:32:40] 2025-07-27 23:32:06,767 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3290.3641666666676
[2025-07-27 19:32:40] 2025-07-27 23:32:06,782 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6747548520/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:32:40] 2025-07-27 23:32:06,783 | INFO     | extracted standard info from prmon json
[2025-07-27 19:32:40] 2025-07-27 23:32:06,783 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:32:40] 2025-07-27 23:32:06,783 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:32:40] 2025-07-27 23:32:06,784 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:32:40] 2025-07-27 23:32:06,784 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:32:40] 2025-07-27 23:32:06,786 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:32:40] 2025-07-27 23:32:06,786 | INFO     | sum of square deviations: 89127252.5
[2025-07-27 19:32:40] 2025-07-27 23:32:06,786 | INFO     | sum of deviations: -5902823722.000001
[2025-07-27 19:32:40] 2025-07-27 23:32:06,786 | INFO     | mean x: 1753656967.5
[2025-07-27 19:32:40] 2025-07-27 23:32:06,786 | INFO     | mean y: 2624479.515151515
[2025-07-27 19:32:40] 2025-07-27 23:32:06,787 | INFO     | -- intersect: 116145865268.96487
[2025-07-27 19:32:40] 2025-07-27 23:32:06,787 | INFO     | intersect: 116145865268.96487
[2025-07-27 19:32:40] 2025-07-27 23:32:06,787 | INFO     | chi2: 0.020725744018964803
[2025-07-27 19:32:40] 2025-07-27 23:32:06,787 | INFO     | -- intersect: 116145865268.96487
[2025-07-27 19:32:40] 2025-07-27 23:32:06,787 | INFO     | current memory leak: -66.23 B/s (using 66 data points, chi2=0.02)
[2025-07-27 19:32:40] 2025-07-27 23:32:06,787 | INFO     | could have reported an average CPU frequency of 3265 MHz (6 samples)
[2025-07-27 19:32:40] 2025-07-27 23:32:06,787 | INFO     | ..............................
[2025-07-27 19:32:40] 2025-07-27 23:32:06,788 | INFO     | . Timing measurements:
[2025-07-27 19:32:40] 2025-07-27 23:32:06,788 | INFO     | . get job = 0 s
[2025-07-27 19:32:40] 2025-07-27 23:32:06,788 | INFO     | . initial setup = 2 s
[2025-07-27 19:32:40] 2025-07-27 23:32:06,788 | INFO     | . payload setup = 8 s
[2025-07-27 19:32:40] 2025-07-27 23:32:06,788 | INFO     | . stage-in = 0 s
[2025-07-27 19:32:40] 2025-07-27 23:32:06,788 | INFO     | . payload execution = 4437 s
[2025-07-27 19:32:40] 2025-07-27 23:32:06,788 | INFO     | . stage-out = 1 s
[2025-07-27 19:32:40] 2025-07-27 23:32:06,788 | INFO     | . log creation = 0 s
[2025-07-27 19:32:40] 2025-07-27 23:32:06,788 | INFO     | ..............................
[2025-07-27 19:32:40] 2025-07-27 23:32:07,289 | INFO     | 
[2025-07-27 19:32:40] 2025-07-27 23:32:07,289 | INFO     | job summary report
[2025-07-27 19:32:40] 2025-07-27 23:32:07,289 | INFO     | --------------------------------------------------
[2025-07-27 19:32:40] 2025-07-27 23:32:07,289 | INFO     | PanDA job id: 6747548520
[2025-07-27 19:32:40] 2025-07-27 23:32:07,289 | INFO     | task id: 45743349
[2025-07-27 19:32:40] 2025-07-27 23:32:07,289 | INFO     | errors: (none)
[2025-07-27 19:32:40] 2025-07-27 23:32:07,290 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:32:40] 2025-07-27 23:32:07,290 | INFO     | pilot state: finished 
[2025-07-27 19:32:40] 2025-07-27 23:32:07,290 | INFO     | transexitcode: 0
[2025-07-27 19:32:40] 2025-07-27 23:32:07,290 | INFO     | exeerrorcode: 0
[2025-07-27 19:32:40] 2025-07-27 23:32:07,290 | INFO     | exeerrordiag: 
[2025-07-27 19:32:40] 2025-07-27 23:32:07,290 | INFO     | exitcode: 0
[2025-07-27 19:32:40] 2025-07-27 23:32:07,290 | INFO     | exitmsg: OK
[2025-07-27 19:32:40] 2025-07-27 23:32:07,290 | INFO     | cpuconsumptiontime: 32626 s
[2025-07-27 19:32:40] 2025-07-27 23:32:07,290 | INFO     | nevents: 400
[2025-07-27 19:32:40] 2025-07-27 23:32:07,290 | INFO     | neventsw: 0
[2025-07-27 19:32:40] 2025-07-27 23:32:07,290 | INFO     | pid: 369789
[2025-07-27 19:32:40] 2025-07-27 23:32:07,290 | INFO     | pgrp: 369789
[2025-07-27 19:32:40] 2025-07-27 23:32:07,290 | INFO     | corecount: 8
[2025-07-27 19:32:40] 2025-07-27 23:32:07,290 | INFO     | event service: False
[2025-07-27 19:32:40] 2025-07-27 23:32:07,292 | INFO     | sizes: {0: 2397305, 1: 2397504, 6: 2397766, 11: 2397794, 4449: 2423762, 4451: 2432762, 4455: 2432974, 4462: 2433168}
[2025-07-27 19:32:40] 2025-07-27 23:32:07,292 | INFO     | --------------------------------------------------
[2025-07-27 19:32:40] 2025-07-27 23:32:07,292 | INFO     | 
[2025-07-27 19:32:40] 2025-07-27 23:32:07,293 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-07-27 19:32:40] 2025-07-27 23:32:07,323 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,323 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,323 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,323 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,323 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,323 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,323 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,324 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,324 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,324 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,324 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,324 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,324 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,324 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,324 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,324 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,324 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,324 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:32:40] 2025-07-27 23:32:07,324 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,324 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:32:40] 2025-07-27 23:32:07,324 | INFO     | job 6747548520 has completed (purged errors)
[2025-07-27 19:32:40] 2025-07-27 23:32:07,325 | INFO     | overall cleanup function is called
[2025-07-27 19:32:40] 2025-07-27 23:32:08,333 | INFO     | --- collectZombieJob: --- 10, [369789]
[2025-07-27 19:32:40] 2025-07-27 23:32:08,333 | INFO     | zombie collector waiting for pid 369789
[2025-07-27 19:32:40] 2025-07-27 23:32:08,333 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:32:40] 2025-07-27 23:32:08,333 | INFO     | collected zombie processes
[2025-07-27 19:32:40] 2025-07-27 23:32:08,333 | INFO     | will attempt to kill all subprocesses of pid=369789
[2025-07-27 19:32:40] 2025-07-27 23:32:08,719 | INFO     | process IDs to be killed: [369789] (in reverse order)
[2025-07-27 19:32:40] 2025-07-27 23:32:08,840 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:32:40] 2025-07-27 23:32:08,840 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:32:40] 2025-07-27 23:32:08,855 | INFO     | did not find any defunct processes belonging to 369789
[2025-07-27 19:32:40] 2025-07-27 23:32:08,865 | INFO     | did not find any defunct processes belonging to 369789
[2025-07-27 19:32:40] 2025-07-27 23:32:08,866 | INFO     | ready for new job
[2025-07-27 19:32:40] 2025-07-27 23:32:08,866 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:32:40] 2025-07-27 23:32:08,868 | INFO     | ***************************************
[2025-07-27 19:32:40] 2025-07-27 23:32:08,868 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:32:40] 2025-07-27 23:32:08,869 | INFO     | ***************************************
[2025-07-27 19:32:40] 2025-07-27 23:32:08,869 | INFO     | 
[2025-07-27 19:32:40] 2025-07-27 23:32:08,874 | INFO     | architecture information:
[2025-07-27 19:32:40] 2025-07-27 23:32:08,874 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:32:40] 2025-07-27 23:32:08,898 | INFO     | cat /etc/os-release:
[2025-07-27 19:32:40] NAME="CentOS Linux"
[2025-07-27 19:32:40] VERSION="7 (Core)"
[2025-07-27 19:32:40] ID="centos"
[2025-07-27 19:32:40] ID_LIKE="rhel fedora"
[2025-07-27 19:32:40] VERSION_ID="7"
[2025-07-27 19:32:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:32:40] ANSI_COLOR="0;31"
[2025-07-27 19:32:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:32:40] HOME_URL="https://www.centos.org/"
[2025-07-27 19:32:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:32:40] 
[2025-07-27 19:32:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:32:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:32:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:32:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:32:40] 
[2025-07-27 19:32:40] 2025-07-27 23:32:08,898 | INFO     | ***************************************
[2025-07-27 19:32:40] 2025-07-27 23:32:09,401 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-07-27 19:32:40] 2025-07-27 23:32:09,425 | INFO     | sufficient remaining disk space (124756426752 B)
[2025-07-27 19:32:40] 2025-07-27 23:32:09,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:32:40] 2025-07-27 23:32:09,426 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:32:40] 2025-07-27 23:32:09,426 | INFO     | update_server=False
[2025-07-27 19:32:40] 2025-07-27 23:32:09,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:32:40] 2025-07-27 23:32:09,442 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 19:32:40] 2025-07-27 23:32:09,443 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 19:32:40] 2025-07-27 23:32:09,443 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:32:40] 2025-07-27 23:32:09,443 | INFO     | will abort loop
[2025-07-27 19:32:40] 2025-07-27 23:32:09,536 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:32:40] 2025-07-27 23:32:10,089 | INFO     | all payload control threads have been joined
[2025-07-27 19:32:40] 2025-07-27 23:32:10,120 | INFO     | all job control threads have been joined
[2025-07-27 19:32:40] 2025-07-27 23:32:10,236 | INFO     | all data control threads have been joined
[2025-07-27 19:32:40] 2025-07-27 23:32:10,396 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:32:40] 2025-07-27 23:32:10,432 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:32:40] 2025-07-27 23:32:10,448 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:32:40] 2025-07-27 23:32:11,006 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:32:40] 2025-07-27 23:32:11,090 | INFO     | [payload] control thread has finished
[2025-07-27 19:32:40] 2025-07-27 23:32:11,126 | INFO     | [job] control thread has finished
[2025-07-27 19:32:40] 2025-07-27 23:32:11,139 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:32:40] 2025-07-27 23:32:11,241 | INFO     | [data] control thread has finished
[2025-07-27 19:32:40] 2025-07-27 23:32:11,403 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:32:40] 2025-07-27 23:32:11,415 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:32:40] 2025-07-27 23:32:11,542 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:32:40] 2025-07-27 23:32:11,559 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:32:40] 2025-07-27 23:32:11,682 | INFO     | [job] validate thread has finished
[2025-07-27 19:32:40] 2025-07-27 23:32:11,691 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:32:40] 2025-07-27 23:32:11,879 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:32:40] 2025-07-27 23:32:11,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:32:40] 2025-07-27 23:32:12,894 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:32:40] 2025-07-27 23:32:14,403 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:32:40] 2025-07-27 23:32:15,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140285087364928)>', '<ExcThread(monitor, started 140284293801728)>']
[2025-07-27 19:32:40] 2025-07-27 23:32:20,432 | INFO     | all workflow threads have been joined
[2025-07-27 19:32:40] 2025-07-27 23:32:20,433 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:32:40] 2025-07-27 23:32:20,434 | INFO     | traces error code: 0
[2025-07-27 19:32:40] 2025-07-27 23:32:20,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:32:40] 2025-07-27 23:32:24,862 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-07-27 19:32:40] 2025-07-27 23:32:40,608 | INFO     | PID=362082 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 19:32:40] 2025-07-27 23:32:40,609 | INFO     | .. there are 14 such processes running
[2025-07-27 19:32:40] 2025-07-27 23:32:40,609 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:32:40] 2025-07-27 23:32:40,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:32:40] 2025-07-27 23:32:40,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:32:40] 2025-07-27 23:32:40,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:32:40] 2025-07-27 23:32:40,610 | INFO     | [monitor] control thread has ended
[2025-07-27 19:32:40] 2025-07-27 23:32:40,735 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:32:40] 2025-07-27 23:32:40,738 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:32:40] 2025-07-27 23:32:40,741 [wrapper] pilotpid: 362082
[2025-07-27 19:32:40] 2025-07-27 23:32:40,745 [wrapper] Pilot exit status: 0
[2025-07-27 19:32:40] 2025-07-27 23:32:40,757 [wrapper] pandaids: 6747548520
[2025-07-27 19:32:40] 2025-07-27 23:32:40,842 [wrapper] cleanup supervisor_pilot  634543 362083
[2025-07-27 19:32:40] 2025-07-27 23:32:40,847 [wrapper] Test setup, not cleaning
[2025-07-27 19:32:40] 2025-07-27 23:32:40,851 [wrapper] apfmon messages muted
[2025-07-27 19:32:40] 2025-07-27 23:32:40,855 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:32:40] 2025-07-27 23:32:40,858 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:32:40]  *** Error codes and diagnostics ***
[2025-07-27 19:32:40]     "exeErrorCode": 0,
[2025-07-27 19:32:40]     "exeErrorDiag": "",
[2025-07-27 19:32:40]     "pilotErrorCode": 0,
[2025-07-27 19:32:40]     "pilotErrorDiag": "",
[2025-07-27 19:32:40]  *** Listing of results directory ***
[2025-07-27 19:32:40] total 343012
[2025-07-27 19:32:40] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:55 pilot3.tar.gz
[2025-07-27 19:32:40] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 12:59 queuedata.json
[2025-07-27 19:32:40] -rwx------. 1 boincer umatlas     36292 Jul 27 12:59 runpilot2-wrapper.sh
[2025-07-27 19:32:40] -rw-r--r--. 1 boincer umatlas       100 Jul 27 18:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:32:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 18:17 run_atlas
[2025-07-27 19:32:40] -rw-r--r--. 1 boincer umatlas       105 Jul 27 18:17 job.xml
[2025-07-27 19:32:40] -rw-r--r--. 2 boincer umatlas 142075719 Jul 27 18:17 EVNT.45743347._002813.pool.root.1
[2025-07-27 19:32:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:17 start_atlas.sh
[2025-07-27 19:32:40] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 18:17 shared
[2025-07-27 19:32:40] -rw-r--r--. 2 boincer umatlas    542892 Jul 27 18:17 input.tar.gz
[2025-07-27 19:32:40] -rw-r--r--. 1 boincer umatlas         0 Jul 27 18:17 boinc_lockfile
[2025-07-27 19:32:40] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 18:17 pandaJob.out
[2025-07-27 19:32:40] -rw-------. 1 boincer umatlas    980109 Jul 27 18:17 agis_schedconf.cvmfs.json
[2025-07-27 19:32:40] -rw-------. 1 boincer umatlas   1593052 Jul 27 18:17 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:32:40] drwx------. 4 boincer umatlas      4096 Jul 27 18:17 pilot3
[2025-07-27 19:32:40] -rw-r--r--. 1 boincer umatlas      6947 Jul 27 19:27 init_data.xml
[2025-07-27 19:32:40] -rw-------. 1 boincer umatlas 203811895 Jul 27 19:31 HITS.45743349._052589.pool.root.1
[2025-07-27 19:32:40] -rw-r--r--. 1 boincer umatlas       530 Jul 27 19:31 boinc_task_state.xml
[2025-07-27 19:32:40] -rw-------. 1 boincer umatlas      1038 Jul 27 19:31 memory_monitor_summary.json
[2025-07-27 19:32:40] -rw-------. 1 boincer umatlas    295419 Jul 27 19:31 log.45743349._052589.job.log.tgz.1
[2025-07-27 19:32:40] -rw-------. 1 boincer umatlas        95 Jul 27 19:32 pilot_heartbeat.json
[2025-07-27 19:32:40] -rw-------. 1 boincer umatlas      7765 Jul 27 19:32 heartbeat.json
[2025-07-27 19:32:40] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:32 boinc_mmap_file
[2025-07-27 19:32:40] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:32 wrapper_checkpoint.txt
[2025-07-27 19:32:40] -rw-------. 1 boincer umatlas       822 Jul 27 19:32 pilotlog.txt
[2025-07-27 19:32:40] -rw-------. 1 boincer umatlas    442942 Jul 27 19:32 log.45743349._052589.job.log.1
[2025-07-27 19:32:40] -rw-------. 1 boincer umatlas       357 Jul 27 19:32 output.list
[2025-07-27 19:32:40] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:32 runtime_log
[2025-07-27 19:32:40] -rw-------. 1 boincer umatlas    757760 Jul 27 19:32 result.tar.gz
[2025-07-27 19:32:40] -rw-------. 1 boincer umatlas       650 Jul 27 19:32 kvWLDmRtJ07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1uVLDmp5kyCn.diag
[2025-07-27 19:32:40] -rw-r--r--. 1 boincer umatlas      8669 Jul 27 19:32 runtime_log.err
[2025-07-27 19:32:40] -rw-r--r--. 1 boincer umatlas     22521 Jul 27 19:32 stderr.txt
[2025-07-27 19:32:40] HITS file was successfully produced:
[2025-07-27 19:32:40] -rw-------. 1 boincer umatlas 203811895 Jul 27 19:31 shared/HITS.pool.root.1
[2025-07-27 19:32:40]  *** Contents of shared directory: ***
[2025-07-27 19:32:40] total 339080
[2025-07-27 19:32:40] -rw-r--r--. 2 boincer umatlas 142075719 Jul 27 18:17 ATLAS.root_0
[2025-07-27 19:32:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:17 start_atlas.sh
[2025-07-27 19:32:40] -rw-r--r--. 2 boincer umatlas    542892 Jul 27 18:17 input.tar.gz
[2025-07-27 19:32:40] -rw-------. 1 boincer umatlas 203811895 Jul 27 19:31 HITS.pool.root.1
[2025-07-27 19:32:40] -rw-------. 1 boincer umatlas    757760 Jul 27 19:32 result.tar.gz
19:32:42 (358244): run_atlas exited; CPU time 32752.723996
19:32:42 (358244): called boinc_finish(0)

</stderr_txt>
]]>

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