Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:36:09 (4152813): wrapper (7.7.26015): starting
18:36:09 (4152813): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 18:36:09] Arguments: --nthreads 8
[2025-07-27 18:36:09] Threads: 8
[2025-07-27 18:36:09] Checking for CVMFS
[2025-07-27 18:36:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:36:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:36:09] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:36:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:36:09] 2.13.0.0 1483043 18988 284068 148827 1 635 33451233 40960000 17982 16776704 0 85641243 99.681 98897924 18859 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 18:36:09] CVMFS is ok
[2025-07-27 18:36:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:36:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:36:09] Further information can be found at the LHC@home message board.
[2025-07-27 18:36:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:36:09] Checking for apptainer binary...
[2025-07-27 18:36:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:36:09] Running /usr/bin/apptainer --version
[2025-07-27 18:36:09] apptainer version 1.4.1-1.el9
[2025-07-27 18:36:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:36:09] c7-4-30.aglt2.org
[2025-07-27 18:36:09] apptainer works
[2025-07-27 18:36:09] Set ATHENA_PROC_NUMBER=8
[2025-07-27 18:36:09] Set ATHENA_CORE_NUMBER=8
[2025-07-27 18:36:09] Starting ATLAS job with PandaID=6747548506
[2025-07-27 18:36:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:53:36]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:53:36]  scope=mc23_13p6TeV
[2025-07-27 19:53:36]  status=None
[2025-07-27 19:53:36]  status_code=0
[2025-07-27 19:53:36]  storage_token=
[2025-07-27 19:53:36]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6747548506/log.45743349._052575.job.log.tgz.1
[2025-07-27 19:53:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/44/log.45743349._052575.job.log.tgz.1
[2025-07-27 19:53:36]  workdir=None
[2025-07-27 19:53:36] ]
[2025-07-27 19:53:36] 2025-07-27 23:52:51,275 | INFO     | transferring file log.45743349._052575.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6747548506/log.45743349._052575.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 19:53:36] 2025-07-27 23:52:51,275 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6747548506/log.45743349._052575.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._052575.job
[2025-07-27 19:53:36] 2025-07-27 23:52:51,301 | INFO     | adding to output.list: log.45743349._052575.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/44/log.45743349._052575.job.log.tg
[2025-07-27 19:53:36] 2025-07-27 23:52:51,302 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 19:53:36] 2025-07-27 23:52:51,302 | INFO     | summary of transferred files:
[2025-07-27 19:53:36] 2025-07-27 23:52:51,302 | INFO     |  -- lfn=log.45743349._052575.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:53:36] 2025-07-27 23:52:51,302 | INFO     | stage-out finished correctly
[2025-07-27 19:53:36] 2025-07-27 23:52:54,497 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:53:36] 2025-07-27 23:52:55,349 | WARNING  | process 4173625 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 19:53:36] 2025-07-27 23:52:55,349 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747548506/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:53:36] 2025-07-27 23:52:55,825 | INFO     | number of running child processes to parent process 4173625: 1
[2025-07-27 19:53:36] 2025-07-27 23:52:55,826 | INFO     | maximum number of monitored processes: 6
[2025-07-27 19:53:36] 2025-07-27 23:52:56,480 | INFO     | job 6747548506 has state=finished
[2025-07-27 19:53:36] 2025-07-27 23:52:56,481 | INFO     | preparing for final server update for job 6747548506 in state='finished'
[2025-07-27 19:53:36] 2025-07-27 23:52:56,482 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:53:36] 2025-07-27 23:52:56,482 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:53:36] 2025-07-27 23:52:56,482 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:53:36] 2025-07-27 23:52:56,482 | INFO     | job 6747548506 has finished - writing final server update
[2025-07-27 19:53:36] 2025-07-27 23:52:56,483 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:53:36] 2025-07-27 23:52:56,484 | INFO     | executing command: lscpu
[2025-07-27 19:53:36] 2025-07-27 23:52:56,562 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:53:36] 2025-07-27 23:52:58,329 | INFO     | monitor loop #335: job 0:6747548506 is in state 'finished'
[2025-07-27 19:53:36] 2025-07-27 23:52:58,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:53:36] 2025-07-27 23:53:00,832 | INFO     | monitor loop #336: job 0:6747548506 is in state 'finished'
[2025-07-27 19:53:36] 2025-07-27 23:53:00,832 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:53:36] 2025-07-27 23:53:02,703 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 19:53:36] 2025-07-27 23:53:02,731 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2987.8667916666654
[2025-07-27 19:53:36] 2025-07-27 23:53:02,750 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747548506/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:53:36] 2025-07-27 23:53:02,751 | INFO     | extracted standard info from prmon json
[2025-07-27 19:53:36] 2025-07-27 23:53:02,751 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:53:36] 2025-07-27 23:53:02,751 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:53:36] 2025-07-27 23:53:02,752 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:53:36] 2025-07-27 23:53:02,752 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:53:36] 2025-07-27 23:53:02,753 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:53:36] 2025-07-27 23:53:02,754 | INFO     | sum of square deviations: 97479037.0
[2025-07-27 19:53:36] 2025-07-27 23:53:02,754 | INFO     | sum of deviations: -10543730470.5
[2025-07-27 19:53:36] 2025-07-27 23:53:02,754 | INFO     | mean x: 1753658160.5
[2025-07-27 19:53:36] 2025-07-27 23:53:02,754 | INFO     | mean y: 2335120.0147058824
[2025-07-27 19:53:36] 2025-07-27 23:53:02,754 | INFO     | -- intersect: 189685158737.8232
[2025-07-27 19:53:36] 2025-07-27 23:53:02,754 | INFO     | intersect: 189685158737.8232
[2025-07-27 19:53:36] 2025-07-27 23:53:02,754 | INFO     | chi2: 0.09123356912649616
[2025-07-27 19:53:36] 2025-07-27 23:53:02,755 | INFO     | -- intersect: 189685158737.8232
[2025-07-27 19:53:36] 2025-07-27 23:53:02,755 | INFO     | current memory leak: -108.16 B/s (using 68 data points, chi2=0.09)
[2025-07-27 19:53:36] 2025-07-27 23:53:02,755 | INFO     | could have reported an average CPU frequency of 3029 MHz (6 samples)
[2025-07-27 19:53:36] 2025-07-27 23:53:02,755 | INFO     | ..............................
[2025-07-27 19:53:36] 2025-07-27 23:53:02,755 | INFO     | . Timing measurements:
[2025-07-27 19:53:36] 2025-07-27 23:53:02,755 | INFO     | . get job = 0 s
[2025-07-27 19:53:36] 2025-07-27 23:53:02,755 | INFO     | . initial setup = 4 s
[2025-07-27 19:53:36] 2025-07-27 23:53:02,755 | INFO     | . payload setup = 7 s
[2025-07-27 19:53:36] 2025-07-27 23:53:02,756 | INFO     | . stage-in = 0 s
[2025-07-27 19:53:36] 2025-07-27 23:53:02,756 | INFO     | . payload execution = 4560 s
[2025-07-27 19:53:36] 2025-07-27 23:53:02,756 | INFO     | . stage-out = 0 s
[2025-07-27 19:53:36] 2025-07-27 23:53:02,756 | INFO     | . log creation = 0 s
[2025-07-27 19:53:36] 2025-07-27 23:53:02,756 | INFO     | ..............................
[2025-07-27 19:53:36] 2025-07-27 23:53:03,098 | INFO     | 
[2025-07-27 19:53:36] 2025-07-27 23:53:03,106 | INFO     | job summary report
[2025-07-27 19:53:36] 2025-07-27 23:53:03,106 | INFO     | --------------------------------------------------
[2025-07-27 19:53:36] 2025-07-27 23:53:03,106 | INFO     | PanDA job id: 6747548506
[2025-07-27 19:53:36] 2025-07-27 23:53:03,106 | INFO     | task id: 45743349
[2025-07-27 19:53:36] 2025-07-27 23:53:03,106 | INFO     | errors: (none)
[2025-07-27 19:53:36] 2025-07-27 23:53:03,106 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:53:36] 2025-07-27 23:53:03,107 | INFO     | pilot state: finished 
[2025-07-27 19:53:36] 2025-07-27 23:53:03,107 | INFO     | transexitcode: 0
[2025-07-27 19:53:36] 2025-07-27 23:53:03,107 | INFO     | exeerrorcode: 0
[2025-07-27 19:53:36] 2025-07-27 23:53:03,107 | INFO     | exeerrordiag: 
[2025-07-27 19:53:36] 2025-07-27 23:53:03,107 | INFO     | exitcode: 0
[2025-07-27 19:53:36] 2025-07-27 23:53:03,107 | INFO     | exitmsg: OK
[2025-07-27 19:53:36] 2025-07-27 23:53:03,107 | INFO     | cpuconsumptiontime: 33384 s
[2025-07-27 19:53:36] 2025-07-27 23:53:03,107 | INFO     | nevents: 400
[2025-07-27 19:53:36] 2025-07-27 23:53:03,107 | INFO     | neventsw: 0
[2025-07-27 19:53:36] 2025-07-27 23:53:03,107 | INFO     | pid: 4173625
[2025-07-27 19:53:36] 2025-07-27 23:53:03,107 | INFO     | pgrp: 4173625
[2025-07-27 19:53:36] 2025-07-27 23:53:03,107 | INFO     | corecount: 8
[2025-07-27 19:53:36] 2025-07-27 23:53:03,107 | INFO     | event service: False
[2025-07-27 19:53:36] 2025-07-27 23:53:03,107 | INFO     | sizes: {0: 2397475, 1: 2397475, 5: 2397765, 11: 2397821, 4571: 2423990, 4572: 2433171, 4576: 2433171, 4584: 2433365}
[2025-07-27 19:53:36] 2025-07-27 23:53:03,107 | INFO     | --------------------------------------------------
[2025-07-27 19:53:36] 2025-07-27 23:53:03,107 | INFO     | 
[2025-07-27 19:53:36] 2025-07-27 23:53:03,108 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 19:53:36] 2025-07-27 23:53:03,136 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,136 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,137 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,137 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,139 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,140 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,140 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,140 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:53:36] 2025-07-27 23:53:03,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,140 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:53:36] 2025-07-27 23:53:03,140 | INFO     | job 6747548506 has completed (purged errors)
[2025-07-27 19:53:36] 2025-07-27 23:53:03,140 | INFO     | overall cleanup function is called
[2025-07-27 19:53:36] 2025-07-27 23:53:03,359 | INFO     | PID=4162137 has CPU usage=15.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 19:53:36] 2025-07-27 23:53:03,359 | INFO     | .. there are 21 such processes running
[2025-07-27 19:53:36] 2025-07-27 23:53:04,152 | INFO     | --- collectZombieJob: --- 10, [4173625]
[2025-07-27 19:53:36] 2025-07-27 23:53:04,152 | INFO     | zombie collector waiting for pid 4173625
[2025-07-27 19:53:36] 2025-07-27 23:53:04,152 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:53:36] 2025-07-27 23:53:04,152 | INFO     | collected zombie processes
[2025-07-27 19:53:36] 2025-07-27 23:53:04,152 | INFO     | will attempt to kill all subprocesses of pid=4173625
[2025-07-27 19:53:36] 2025-07-27 23:53:04,589 | INFO     | process IDs to be killed: [4173625] (in reverse order)
[2025-07-27 19:53:36] 2025-07-27 23:53:04,756 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:53:36] 2025-07-27 23:53:04,757 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:53:36] 2025-07-27 23:53:04,778 | INFO     | did not find any defunct processes belonging to 4173625
[2025-07-27 19:53:36] 2025-07-27 23:53:04,797 | INFO     | did not find any defunct processes belonging to 4173625
[2025-07-27 19:53:36] 2025-07-27 23:53:04,798 | INFO     | ready for new job
[2025-07-27 19:53:36] 2025-07-27 23:53:04,798 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:53:36] 2025-07-27 23:53:04,800 | INFO     | ***************************************
[2025-07-27 19:53:36] 2025-07-27 23:53:04,800 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:53:36] 2025-07-27 23:53:04,800 | INFO     | ***************************************
[2025-07-27 19:53:36] 2025-07-27 23:53:04,800 | INFO     | 
[2025-07-27 19:53:36] 2025-07-27 23:53:04,817 | INFO     | architecture information:
[2025-07-27 19:53:36] 2025-07-27 23:53:04,818 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:53:36] 2025-07-27 23:53:04,837 | INFO     | cat /etc/os-release:
[2025-07-27 19:53:36] NAME="CentOS Linux"
[2025-07-27 19:53:36] VERSION="7 (Core)"
[2025-07-27 19:53:36] ID="centos"
[2025-07-27 19:53:36] ID_LIKE="rhel fedora"
[2025-07-27 19:53:36] VERSION_ID="7"
[2025-07-27 19:53:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:53:36] ANSI_COLOR="0;31"
[2025-07-27 19:53:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:53:36] HOME_URL="https://www.centos.org/"
[2025-07-27 19:53:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:53:36] 
[2025-07-27 19:53:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:53:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:53:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:53:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:53:36] 
[2025-07-27 19:53:36] 2025-07-27 23:53:04,838 | INFO     | ***************************************
[2025-07-27 19:53:36] 2025-07-27 23:53:05,342 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 19:53:36] 2025-07-27 23:53:05,364 | INFO     | sufficient remaining disk space (128983236608 B)
[2025-07-27 19:53:36] 2025-07-27 23:53:05,364 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:53:36] 2025-07-27 23:53:05,364 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:53:36] 2025-07-27 23:53:05,364 | INFO     | update_server=False
[2025-07-27 19:53:36] 2025-07-27 23:53:05,364 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:53:36] 2025-07-27 23:53:05,365 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:53:36] 2025-07-27 23:53:05,365 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:53:36] 2025-07-27 23:53:05,504 | INFO     | all job control threads have been joined
[2025-07-27 19:53:36] 2025-07-27 23:53:05,807 | INFO     | all payload control threads have been joined
[2025-07-27 19:53:36] 2025-07-27 23:53:05,850 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 19:53:36] 2025-07-27 23:53:05,850 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 19:53:36] 2025-07-27 23:53:05,850 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:53:36] 2025-07-27 23:53:05,850 | INFO     | will abort loop
[2025-07-27 19:53:36] 2025-07-27 23:53:06,239 | INFO     | all data control threads have been joined
[2025-07-27 19:53:36] 2025-07-27 23:53:06,369 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:53:36] 2025-07-27 23:53:06,509 | INFO     | [job] control thread has finished
[2025-07-27 19:53:36] 2025-07-27 23:53:06,604 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:53:36] 2025-07-27 23:53:06,813 | INFO     | [payload] control thread has finished
[2025-07-27 19:53:36] 2025-07-27 23:53:06,855 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:53:36] 2025-07-27 23:53:07,042 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:53:36] 2025-07-27 23:53:07,173 | INFO     | [job] validate thread has finished
[2025-07-27 19:53:36] 2025-07-27 23:53:07,244 | INFO     | [data] control thread has finished
[2025-07-27 19:53:36] 2025-07-27 23:53:07,266 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:53:36] 2025-07-27 23:53:07,338 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:53:36] 2025-07-27 23:53:07,371 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:53:36] 2025-07-27 23:53:07,679 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:53:36] 2025-07-27 23:53:07,782 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:53:36] 2025-07-27 23:53:07,856 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:53:36] 2025-07-27 23:53:07,857 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:53:36] 2025-07-27 23:53:08,858 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:53:36] 2025-07-27 23:53:09,371 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:53:36] 2025-07-27 23:53:11,392 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139746945419072)>', '<ExcThread(monitor, started 139746449794816)>']
[2025-07-27 19:53:36] 2025-07-27 23:53:16,417 | INFO     | all workflow threads have been joined
[2025-07-27 19:53:36] 2025-07-27 23:53:16,418 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:53:36] 2025-07-27 23:53:16,421 | INFO     | traces error code: 0
[2025-07-27 19:53:36] 2025-07-27 23:53:16,422 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:53:36] 2025-07-27 23:53:36,011 | INFO     | PID=4162137 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:53:36] 2025-07-27 23:53:36,012 | INFO     | .. there are 21 such processes running
[2025-07-27 19:53:36] 2025-07-27 23:53:36,012 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:53:36] 2025-07-27 23:53:36,012 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:53:36] 2025-07-27 23:53:36,012 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:53:36] 2025-07-27 23:53:36,012 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:53:36] 2025-07-27 23:53:36,012 | INFO     | [monitor] control thread has ended
[2025-07-27 19:53:36] 2025-07-27 23:53:36,244 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:53:36] 2025-07-27 23:53:36,250 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:53:36] 2025-07-27 23:53:36,255 [wrapper] pilotpid: 4162137
[2025-07-27 19:53:36] 2025-07-27 23:53:36,259 [wrapper] Pilot exit status: 0
[2025-07-27 19:53:36] 2025-07-27 23:53:36,279 [wrapper] pandaids: 6747548506
[2025-07-27 19:53:36] 2025-07-27 23:53:36,399 [wrapper] cleanup supervisor_pilot  316523 4162138
[2025-07-27 19:53:36] 2025-07-27 23:53:36,404 [wrapper] Test setup, not cleaning
[2025-07-27 19:53:36] 2025-07-27 23:53:36,410 [wrapper] apfmon messages muted
[2025-07-27 19:53:36] 2025-07-27 23:53:36,415 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:53:36] 2025-07-27 23:53:36,420 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:53:36]  *** Error codes and diagnostics ***
[2025-07-27 19:53:36]     "exeErrorCode": 0,
[2025-07-27 19:53:36]     "exeErrorDiag": "",
[2025-07-27 19:53:36]     "pilotErrorCode": 0,
[2025-07-27 19:53:36]     "pilotErrorDiag": "",
[2025-07-27 19:53:36]  *** Listing of results directory ***
[2025-07-27 19:53:36] total 348180
[2025-07-27 19:53:36] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:55 pilot3.tar.gz
[2025-07-27 19:53:36] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 12:59 queuedata.json
[2025-07-27 19:53:36] -rwx------. 1 boincer umatlas     36292 Jul 27 12:59 runpilot2-wrapper.sh
[2025-07-27 19:53:36] -rw-r--r--. 1 boincer umatlas       100 Jul 27 18:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:53:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 18:36 run_atlas
[2025-07-27 19:53:36] -rw-r--r--. 1 boincer umatlas       105 Jul 27 18:36 job.xml
[2025-07-27 19:53:36] -rw-r--r--. 2 boincer umatlas 148994644 Jul 27 18:36 EVNT.45743347._002812.pool.root.1
[2025-07-27 19:53:36] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 18:36 shared
[2025-07-27 19:53:36] -rw-r--r--. 2 boincer umatlas    542889 Jul 27 18:36 input.tar.gz
[2025-07-27 19:53:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:36 start_atlas.sh
[2025-07-27 19:53:36] -rw-r--r--. 1 boincer umatlas         0 Jul 27 18:36 boinc_lockfile
[2025-07-27 19:53:36] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 18:36 pandaJob.out
[2025-07-27 19:53:36] -rw-------. 1 boincer umatlas    980109 Jul 27 18:36 agis_schedconf.cvmfs.json
[2025-07-27 19:53:36] -rw-------. 1 boincer umatlas   1593052 Jul 27 18:36 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:53:36] drwx------. 4 boincer umatlas      4096 Jul 27 18:36 pilot3
[2025-07-27 19:53:36] -rw-r--r--. 1 boincer umatlas      6935 Jul 27 19:46 init_data.xml
[2025-07-27 19:53:36] -rw-r--r--. 1 boincer umatlas       529 Jul 27 19:52 boinc_task_state.xml
[2025-07-27 19:53:36] -rw-------. 1 boincer umatlas 202166674 Jul 27 19:52 HITS.45743349._052575.pool.root.1
[2025-07-27 19:53:36] -rw-------. 1 boincer umatlas      1028 Jul 27 19:52 memory_monitor_summary.json
[2025-07-27 19:53:36] -rw-------. 1 boincer umatlas    296276 Jul 27 19:52 log.45743349._052575.job.log.tgz.1
[2025-07-27 19:53:36] -rw-------. 1 boincer umatlas        95 Jul 27 19:52 pilot_heartbeat.json
[2025-07-27 19:53:36] -rw-------. 1 boincer umatlas      7772 Jul 27 19:53 heartbeat.json
[2025-07-27 19:53:36] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:53 boinc_mmap_file
[2025-07-27 19:53:36] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:53 wrapper_checkpoint.txt
[2025-07-27 19:53:36] -rw-------. 1 boincer umatlas       823 Jul 27 19:53 pilotlog.txt
[2025-07-27 19:53:36] -rw-------. 1 boincer umatlas    452880 Jul 27 19:53 log.45743349._052575.job.log.1
[2025-07-27 19:53:36] -rw-------. 1 boincer umatlas       357 Jul 27 19:53 output.list
[2025-07-27 19:53:36] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:53 runtime_log
[2025-07-27 19:53:36] -rw-------. 1 boincer umatlas    768000 Jul 27 19:53 result.tar.gz
[2025-07-27 19:53:36] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 19:53 runtime_log.err
[2025-07-27 19:53:36] -rw-------. 1 boincer umatlas       651 Jul 27 19:53 qdGLDmRtJ07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmouVLDmiYAeIo.diag
[2025-07-27 19:53:36] -rw-r--r--. 1 boincer umatlas     22067 Jul 27 19:53 stderr.txt
[2025-07-27 19:53:36] HITS file was successfully produced:
[2025-07-27 19:53:36] -rw-------. 1 boincer umatlas 202166674 Jul 27 19:52 shared/HITS.pool.root.1
[2025-07-27 19:53:36]  *** Contents of shared directory: ***
[2025-07-27 19:53:36] total 344240
[2025-07-27 19:53:36] -rw-r--r--. 2 boincer umatlas 148994644 Jul 27 18:36 ATLAS.root_0
[2025-07-27 19:53:36] -rw-r--r--. 2 boincer umatlas    542889 Jul 27 18:36 input.tar.gz
[2025-07-27 19:53:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:36 start_atlas.sh
[2025-07-27 19:53:36] -rw-------. 1 boincer umatlas 202166674 Jul 27 19:52 HITS.pool.root.1
[2025-07-27 19:53:36] -rw-------. 1 boincer umatlas    768000 Jul 27 19:53 result.tar.gz
19:53:37 (4152813): run_atlas exited; CPU time 33553.253017
19:53:37 (4152813): called boinc_finish(0)

</stderr_txt>
]]>

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