Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-28 16:50:49 (7660): Detected: vboxwrapper 26206
2025-07-28 16:50:49 (7660): Detected: BOINC client v7.24.1
2025-07-28 16:50:49 (7660): Detected: VirtualBox VboxManage Interface (Version: 7.0.10)
2025-07-28 16:50:50 (7660): Successfully copied 'init_data.xml' to the shared directory.
2025-07-28 16:50:50 (7660): Create VM. (boinc_3015dbb224334f9b, slot#5)
2025-07-28 16:50:51 (7660): Setting Memory Size for VM. (4800MB)
2025-07-28 16:50:51 (7660): Setting CPU Count for VM. (8)
2025-07-28 16:50:51 (7660): Setting Chipset Options for VM.
2025-07-28 16:50:51 (7660): Setting Graphics Controller Options for VM.
2025-07-28 16:50:52 (7660): Setting Boot Options for VM.
2025-07-28 16:50:52 (7660): Setting Network Configuration for NAT.
2025-07-28 16:50:52 (7660): Enabling VM Network Access.
2025-07-28 16:50:52 (7660): Disabling USB Support for VM.
2025-07-28 16:50:53 (7660): Disabling COM Port Support for VM.
2025-07-28 16:50:53 (7660): Disabling LPT Port Support for VM.
2025-07-28 16:50:53 (7660): Disabling Audio Support for VM.
2025-07-28 16:50:54 (7660): Disabling Clipboard Support for VM.
2025-07-28 16:50:54 (7660): Disabling Drag and Drop Support for VM.
2025-07-28 16:50:54 (7660): Adding storage controller(s) to VM.
2025-07-28 16:50:54 (7660): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-28 16:50:57 (7660): Adding VirtualBox Guest Additions to VM.
2025-07-28 16:50:57 (7660): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-28 16:50:58 (7660): forwarding host port 54226 to guest port 80
2025-07-28 16:50:58 (7660): Enabling remote desktop for VM.
2025-07-28 16:50:58 (7660): Required extension pack not installed, remote desktop not enabled.
2025-07-28 16:50:58 (7660): Enabling shared directory for VM.
2025-07-28 16:50:59 (7660): Starting VM using VBoxManage interface. (boinc_3015dbb224334f9b, slot#5)
2025-07-28 16:51:04 (7660): Successfully started VM. (PID = '2632')
2025-07-28 16:51:04 (7660): Reporting VM Process ID to BOINC.
2025-07-28 16:51:04 (7660): Guest Log: BIOS: VirtualBox 7.0.10
2025-07-28 16:51:04 (7660): Guest Log: CPUID EDX: 0x178bfbff
2025-07-28 16:51:04 (7660): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-28 16:51:04 (7660): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-28 16:51:04 (7660): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-28 16:51:04 (7660): Detected: Web Application Enabled (http://localhost:54226)
2025-07-28 16:51:04 (7660): Preference change detected
2025-07-28 16:51:04 (7660): Setting CPU throttle for VM. (100%)
2025-07-28 16:51:04 (7660): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-28 16:51:06 (7660): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-28 16:51:06 (7660): Guest Log: BIOS: Booting from Hard Disk...
2025-07-28 16:51:08 (7660): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-28 16:51:08 (7660): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-28 16:51:08 (7660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-28 16:51:14 (7660): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-28 16:51:14 (7660): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-28 16:51:18 (7660): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-28 16:51:18 (7660): Guest Log: 00:00:00.000109 main     Log opened 2025-07-28T16:51:16.684777000Z
2025-07-28 16:51:18 (7660): Guest Log: 00:00:00.000174 main     OS Product: Linux
2025-07-28 16:51:18 (7660): Guest Log: 00:00:00.000214 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-28 16:51:18 (7660): Guest Log: 00:00:00.000235 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-28 16:51:18 (7660): Guest Log: 00:00:00.000254 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-28 16:51:18 (7660): Guest Log: 00:00:00.000254 main     Process ID: 1362
2025-07-28 16:51:18 (7660): Guest Log: 00:00:00.000255 main     Package type: LINUX_64BITS_GENERIC
2025-07-28 16:51:18 (7660): Guest Log: 00:00:00.000987 main     5.2.32 r132073 started. Verbose level = 0
2025-07-28 16:51:19 (7660): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-28 16:51:19 (7660): Guest Log: [INFO] Mounting shared directory
2025-07-28 16:51:19 (7660): Guest Log: [INFO] Checking for init_data.xml
2025-07-28 16:51:24 (7660): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-28 16:51:24 (7660): Guest Log: [INFO] Detected branch: prod
2025-07-28 16:51:25 (7660): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-28 16:51:25 (7660): Guest Log: Copying input files
2025-07-28 16:51:26 (7660): Guest Log: Copied input files into RunAtlas.
2025-07-28 16:51:26 (7660): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-28 16:51:26 (7660): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-28 16:51:26 (7660): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-28 16:51:26 (7660): Guest Log: Further information can be found at the LHC@home message board.
2025-07-28 16:51:28 (7660): Guest Log: 00:00:10.004036 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 387 965 637 000ns (GuestNow=1 753 689 088 722 503 000 ns GuestLast=1 753 721 476 688 140 000 ns fSetTimeLastLoop=true )
2025-07-28 16:51:36 (7660): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-28 16:51:36 (7660): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-28 16:51:36 (7660): Guest Log: 2.6.3.0 1640 0 32200 148840 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-28 16:51:37 (7660): Guest Log: copied the webapp to /var/www
2025-07-28 16:51:37 (7660): Guest Log: ATHENA_PROC_NUMBER=8
2025-07-28 16:51:37 (7660): Guest Log: ATHENA_CORE_NUMBER=8
2025-07-28 16:51:37 (7660): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-28 16:51:37 (7660): Guest Log:  *** Starting ATLAS job. (PandaID=6747548810 taskID=45743349) ***
2025-07-28 18:32:14 (7660): Status Report: Elapsed Time: '6000.643810'
2025-07-28 18:32:14 (7660): Status Report: CPU Time: '42926.859375'
2025-07-28 19:33:05 (7660): Guest Log:  *** Job finished ***
2025-07-28 19:33:05 (7660): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:32:51,006 | INFO     | [job] queue monitor thread has finished
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:32:57,824 | INFO     | job.realtimelogging is not enabled
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:32:58,825 | INFO     | [payload] run_realtimelog thread has finished
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:32:58,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140666588780352)>', '<ExcThread(monitor, started 140665992234752)>']
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:32:59,320 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:32:59,320 | INFO     | [monitor] control thread has ended
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:33:03,962 | INFO     | all workflow threads have been joined
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:33:03,962 | INFO     | end of generic workflow (traces error code: 0)
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:33:03,962 | INFO     | traces error code: 0
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:33:03,962 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:33:04,040 [wrapper] ==== pilot stdout END ====
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:33:04,043 [wrapper] ==== wrapper stdout RESUME ====
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:33:04,047 [wrapper] pilotpid: 6009
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:33:04,051 [wrapper] Pilot exit status: 0
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:33:04,224 [wrapper] pandaids: 6747548810
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:33:04,250 [wrapper] cleanup supervisor_pilot  6317 6010
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:33:04,254 [wrapper] Test setup, not cleaning
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:33:04,259 [wrapper] apfmon messages muted
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:33:04,263 [wrapper] ==== wrapper stdout END ====
2025-07-28 19:33:05 (7660): Guest Log: 2025-07-28 10:33:04,266 [wrapper] ==== wrapper stderr END ====
2025-07-28 19:33:05 (7660): Guest Log:  *** Error codes and diagnostics ***
2025-07-28 19:33:05 (7660): Guest Log:     "exeErrorCode": 0,
2025-07-28 19:33:05 (7660): Guest Log:     "exeErrorDiag": "",
2025-07-28 19:33:05 (7660): Guest Log:     "pilotErrorCode": 0,
2025-07-28 19:33:05 (7660): Guest Log:     "pilotErrorDiag": "",
2025-07-28 19:33:05 (7660): Guest Log:  *** Listing of results directory ***
2025-07-28 19:33:05 (7660): Guest Log: total 207844
2025-07-28 19:33:05 (7660): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 27 16:55 pilot3.tar.gz
2025-07-28 19:33:05 (7660): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 27 17:03 queuedata.json
2025-07-28 19:33:05 (7660): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 27 17:04 runpilot2-wrapper.sh
2025-07-28 19:33:05 (7660): Guest Log: -rwxr-xr-x. 1 atlas atlas      6093 Jul 28 07:51 init_data.xml
2025-07-28 19:33:05 (7660): Guest Log: -rwxr-xr-x. 1 atlas atlas    542900 Jul 28 07:51 input.tar.gz
2025-07-28 19:33:05 (7660): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 28 07:51 start_atlas.sh
2025-07-28 19:33:05 (7660): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 28 07:51 EVNT.45743347._002817.pool.root.1 -> /data/./ATLAS.root_0
2025-07-28 19:33:05 (7660): Guest Log: -rw-r--r--. 1 atlas atlas      2562 Jul 28 07:51 pandaJob.out
2025-07-28 19:33:05 (7660): Guest Log: -rw-------. 1 atlas atlas    978452 Jul 28 07:53 agis_schedconf.cvmfs.json
2025-07-28 19:33:05 (7660): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 28 07:53 agis_ddmendpoints.agis.ALL.json
2025-07-28 19:33:05 (7660): Guest Log: drwx------. 4 atlas atlas      4096 Jul 28 07:53 pilot3
2025-07-28 19:33:05 (7660): Guest Log: -rw-------. 1 atlas atlas 206757832 Jul 28 10:32 HITS.45743349._052677.pool.root.1
2025-07-28 19:33:05 (7660): Guest Log: -rw-------. 1 atlas atlas        95 Jul 28 10:32 pilot_heartbeat.json
2025-07-28 19:33:05 (7660): Guest Log: -rw-------. 1 atlas atlas      1031 Jul 28 10:32 memory_monitor_summary.json
2025-07-28 19:33:05 (7660): Guest Log: -rw-------. 1 atlas atlas    331484 Jul 28 10:32 log.45743349._052677.job.log.tgz.1
2025-07-28 19:33:05 (7660): Guest Log: -rw-------. 1 atlas atlas      7826 Jul 28 10:32 heartbeat.json
2025-07-28 19:33:05 (7660): Guest Log: -rw-------. 1 atlas atlas      4612 Jul 28 10:33 pilotlog.txt
2025-07-28 19:33:05 (7660): Guest Log: -rw-------. 1 atlas atlas    802841 Jul 28 10:33 log.45743349._052677.job.log.1
2025-07-28 19:33:05 (7660): Guest Log: -rw-------. 1 atlas atlas       357 Jul 28 10:33 output.list
2025-07-28 19:33:05 (7660): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 28 10:33 runtime_log
2025-07-28 19:33:05 (7660): Guest Log: -rw-------. 1 atlas atlas   1157120 Jul 28 10:33 result.tar.gz
2025-07-28 19:33:05 (7660): Guest Log: -rw-r--r--. 1 atlas atlas      8608 Jul 28 10:33 runtime_log.err
2025-07-28 19:33:05 (7660): Guest Log: -rw-------. 1 atlas atlas       659 Jul 28 10:33 8xsLDmUyJ07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyvVLDmnm2Fzn.diag
2025-07-28 19:33:05 (7660): Guest Log: Looking for outputfile HITS.45743349._052677.pool.root.1
2025-07-28 19:33:05 (7660): Guest Log: HITS file was successfully produced
2025-07-28 19:33:05 (7660): Guest Log: -rw-------. 1 atlas atlas 206757832 Jul 28 10:32 /home/atlas/RunAtlas/HITS.45743349._052677.pool.root.1
2025-07-28 19:33:06 (7660): Guest Log: Successfully finished the ATLAS job!
2025-07-28 19:33:06 (7660): Guest Log: Copying the results back to the shared directory!
2025-07-28 19:33:06 (7660): Guest Log:  *** Contents of shared directory: ***
2025-07-28 19:33:06 (7660): Guest Log: total 427708
2025-07-28 19:33:06 (7660): Guest Log: -rwxrwxrwx. 1 root root 229483644 Jul 28 07:50 ATLAS.root_0
2025-07-28 19:33:06 (7660): Guest Log: -rwxrwxrwx. 1 root root 206757832 Jul 28 10:33 HITS.pool.root.1
2025-07-28 19:33:06 (7660): Guest Log: -rwxrwxrwx. 1 root root      6093 Jul 28 07:50 init_data.xml
2025-07-28 19:33:06 (7660): Guest Log: -rwxrwxrwx. 1 root root    542900 Jul 27 22:10 input.tar.gz
2025-07-28 19:33:06 (7660): Guest Log: -rwxrwxrwx. 1 root root   1157120 Jul 28 10:33 result.tar.gz
2025-07-28 19:33:06 (7660): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 27 22:10 start_atlas.sh
2025-07-28 19:33:06 (7660): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-28 19:33:06 (7660): VM Completion File Detected.
2025-07-28 19:33:06 (7660): Powering off VM.
2025-07-28 19:33:07 (7660): Successfully stopped VM.
2025-07-28 19:33:07 (7660): Deregistering VM. (boinc_3015dbb224334f9b, slot#5)
2025-07-28 19:33:07 (7660): Removing network bandwidth throttle group from VM.
2025-07-28 19:33:07 (7660): Removing VM from VirtualBox.
19:33:12 (7660): called boinc_finish(0)

</stderr_txt>
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