Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:07:43 (638076): wrapper (7.7.26015): starting
18:07:43 (638076): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 18:07:43] Arguments: --nthreads 8
[2025-07-27 18:07:43] Threads: 8
[2025-07-27 18:07:43] Checking for CVMFS
[2025-07-27 18:07:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:07:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:07:44] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:07:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:07:44] 2.13.1.0 5035 2518 164272 148826 1 64 30237401 40960000 11611 16776704 0 8283387 99.684 7820883 26106 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 18:07:44] CVMFS is ok
[2025-07-27 18:07:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:07:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:07:44] Further information can be found at the LHC@home message board.
[2025-07-27 18:07:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:07:44] Checking for apptainer binary...
[2025-07-27 18:07:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:07:44] Running /usr/bin/apptainer --version
[2025-07-27 18:07:44] apptainer version 1.4.1-1.el9
[2025-07-27 18:07:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:07:44] c-206-41.aglt2.org
[2025-07-27 18:07:44] apptainer works
[2025-07-27 18:07:44] Set ATHENA_PROC_NUMBER=8
[2025-07-27 18:07:44] Set ATHENA_CORE_NUMBER=8
[2025-07-27 18:07:44] Starting ATLAS job with PandaID=6747548890
[2025-07-27 18:07:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:45:30]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:45:30] 2025-07-28 00:44:57,231 | INFO     | sum of square deviations: 1025700726.9932907
[2025-07-27 20:45:30] 2025-07-28 00:44:57,232 | INFO     | sum of deviations: 3761483982.2483215
[2025-07-27 20:45:30] 2025-07-28 00:44:57,232 | INFO     | mean x: 1753658936.0067115
[2025-07-27 20:45:30] 2025-07-28 00:44:57,232 | INFO     | mean y: 2534778.751677852
[2025-07-27 20:45:30] 2025-07-28 00:44:57,232 | INFO     | -- intersect: -6428541874.037931
[2025-07-27 20:45:30] 2025-07-28 00:44:57,232 | INFO     | intersect: -6428541874.037931
[2025-07-27 20:45:30] 2025-07-28 00:44:57,232 | INFO     | chi2: 0.0056923218709656435
[2025-07-27 20:45:30] 2025-07-28 00:44:57,233 | INFO     | current chi2=0.0056923218709656435 (change=99.49310396517585 %)
[2025-07-27 20:45:30] 2025-07-28 00:44:57,233 | INFO     | sum of square deviations: 925865991.9930569
[2025-07-27 20:45:30] 2025-07-28 00:44:57,233 | INFO     | sum of deviations: 2106017501.3263884
[2025-07-27 20:45:30] 2025-07-28 00:44:57,234 | INFO     | mean x: 1753659088.5069444
[2025-07-27 20:45:30] 2025-07-28 00:44:57,234 | INFO     | mean y: 2537296.173611111
[2025-07-27 20:45:30] 2025-07-28 00:44:57,234 | INFO     | -- intersect: -3986416573.7114835
[2025-07-27 20:45:30] 2025-07-28 00:44:57,234 | INFO     | intersect: -3986416573.7114835
[2025-07-27 20:45:30] 2025-07-28 00:44:57,234 | INFO     | chi2: 0.0025162334337323726
[2025-07-27 20:45:30] 2025-07-28 00:44:57,234 | INFO     | current chi2=0.0025162334337323726 (change=55.796009242437314 %)
[2025-07-27 20:45:30] 2025-07-28 00:44:57,234 | INFO     | sum of square deviations: 832729056.9928035
[2025-07-27 20:45:30] 2025-07-28 00:44:57,235 | INFO     | sum of deviations: 1178500583.1007197
[2025-07-27 20:45:30] 2025-07-28 00:44:57,235 | INFO     | mean x: 1753659241.0071943
[2025-07-27 20:45:30] 2025-07-28 00:44:57,235 | INFO     | mean y: 2538813.8992805756
[2025-07-27 20:45:30] 2025-07-28 00:44:57,235 | INFO     | -- intersect: -2479286962.122373
[2025-07-27 20:45:30] 2025-07-28 00:44:57,235 | INFO     | intersect: -2479286962.122373
[2025-07-27 20:45:30] 2025-07-28 00:44:57,236 | INFO     | chi2: 0.0015574789961004729
[2025-07-27 20:45:30] 2025-07-28 00:44:57,236 | INFO     | current chi2=0.0015574789961004729 (change=38.102762040235774 %)
[2025-07-27 20:45:30] 2025-07-28 00:44:57,236 | INFO     | sum of square deviations: 746057359.4925351
[2025-07-27 20:45:30] 2025-07-28 00:44:57,236 | INFO     | sum of deviations: 549078051.3582093
[2025-07-27 20:45:30] 2025-07-28 00:44:57,236 | INFO     | mean x: 1753659393.5074627
[2025-07-27 20:45:30] 2025-07-28 00:44:57,237 | INFO     | mean y: 2539921.6417910447
[2025-07-27 20:45:30] 2025-07-28 00:44:57,237 | INFO     | -- intersect: -1288105992.2167013
[2025-07-27 20:45:30] 2025-07-28 00:44:57,237 | INFO     | intersect: -1288105992.2167013
[2025-07-27 20:45:30] 2025-07-28 00:44:57,237 | INFO     | chi2: 0.0010421474441212153
[2025-07-27 20:45:30] 2025-07-28 00:44:57,237 | INFO     | current chi2=0.0010421474441212153 (change=33.08754424743546 %)
[2025-07-27 20:45:30] 2025-07-28 00:44:57,237 | INFO     | sum of square deviations: 665618336.9922469
[2025-07-27 20:45:30] 2025-07-28 00:44:57,238 | INFO     | sum of deviations: 221415200.81395382
[2025-07-27 20:45:30] 2025-07-28 00:44:57,238 | INFO     | mean x: 1753659546.007752
[2025-07-27 20:45:30] 2025-07-28 00:44:57,238 | INFO     | mean y: 2540540.1860465114
[2025-07-27 20:45:30] 2025-07-28 00:44:57,238 | INFO     | -- intersect: -580807091.5711842
[2025-07-27 20:45:30] 2025-07-28 00:44:57,238 | INFO     | intersect: -580807091.5711842
[2025-07-27 20:45:30] 2025-07-28 00:44:57,238 | INFO     | chi2: 0.000876115482447696
[2025-07-27 20:45:30] 2025-07-28 00:44:57,238 | INFO     | current chi2=0.000876115482447696 (change=15.931715095604806 %)
[2025-07-27 20:45:30] 2025-07-28 00:44:57,238 | INFO     | left removable region: 50
[2025-07-27 20:45:30] 2025-07-28 00:44:57,238 | INFO     | sum of square deviations: 291822262.48979646
[2025-07-27 20:45:30] 2025-07-28 00:44:57,239 | INFO     | sum of deviations: 150395300.16326526
[2025-07-27 20:45:30] 2025-07-28 00:44:57,239 | INFO     | mean x: 1753660125.510204
[2025-07-27 20:45:30] 2025-07-28 00:44:57,239 | INFO     | mean y: 2541373.836734694
[2025-07-27 20:45:30] 2025-07-28 00:44:57,239 | INFO     | -- intersect: -901235598.8665673
[2025-07-27 20:45:30] 2025-07-28 00:44:57,239 | INFO     | intersect: -901235598.8665673
[2025-07-27 20:45:30] 2025-07-28 00:44:57,239 | INFO     | chi2: 0.0007603731175046494
[2025-07-27 20:45:30] 2025-07-28 00:44:57,239 | INFO     | -- intersect: -901235598.8665673
[2025-07-27 20:45:30] 2025-07-28 00:44:57,239 | INFO     | current memory leak: 0.52 B/s (using 98 data points, chi2=0.00)
[2025-07-27 20:45:30] 2025-07-28 00:44:57,240 | INFO     | could have reported an average CPU frequency of 3205 MHz (9 samples)
[2025-07-27 20:45:30] 2025-07-28 00:44:57,240 | INFO     | ..............................
[2025-07-27 20:45:30] 2025-07-28 00:44:57,240 | INFO     | . Timing measurements:
[2025-07-27 20:45:30] 2025-07-28 00:44:57,240 | INFO     | . get job = 0 s
[2025-07-27 20:45:30] 2025-07-28 00:44:57,240 | INFO     | . initial setup = 3 s
[2025-07-27 20:45:30] 2025-07-28 00:44:57,240 | INFO     | . payload setup = 9 s
[2025-07-27 20:45:30] 2025-07-28 00:44:57,240 | INFO     | . stage-in = 0 s
[2025-07-27 20:45:30] 2025-07-28 00:44:57,240 | INFO     | . payload execution = 9379 s
[2025-07-27 20:45:30] 2025-07-28 00:44:57,240 | INFO     | . stage-out = 0 s
[2025-07-27 20:45:30] 2025-07-28 00:44:57,240 | INFO     | . log creation = 0 s
[2025-07-27 20:45:30] 2025-07-28 00:44:57,240 | INFO     | ..............................
[2025-07-27 20:45:30] 2025-07-28 00:44:57,322 | INFO     | 
[2025-07-27 20:45:30] 2025-07-28 00:44:57,322 | INFO     | job summary report
[2025-07-27 20:45:30] 2025-07-28 00:44:57,322 | INFO     | --------------------------------------------------
[2025-07-27 20:45:30] 2025-07-28 00:44:57,322 | INFO     | PanDA job id: 6747548890
[2025-07-27 20:45:30] 2025-07-28 00:44:57,322 | INFO     | task id: 45743349
[2025-07-27 20:45:30] 2025-07-28 00:44:57,322 | INFO     | errors: (none)
[2025-07-27 20:45:30] 2025-07-28 00:44:57,322 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:45:30] 2025-07-28 00:44:57,323 | INFO     | pilot state: finished 
[2025-07-27 20:45:30] 2025-07-28 00:44:57,323 | INFO     | transexitcode: 0
[2025-07-27 20:45:30] 2025-07-28 00:44:57,323 | INFO     | exeerrorcode: 0
[2025-07-27 20:45:30] 2025-07-28 00:44:57,323 | INFO     | exeerrordiag: 
[2025-07-27 20:45:30] 2025-07-28 00:44:57,323 | INFO     | exitcode: 0
[2025-07-27 20:45:30] 2025-07-28 00:44:57,323 | INFO     | exitmsg: OK
[2025-07-27 20:45:30] 2025-07-28 00:44:57,323 | INFO     | cpuconsumptiontime: 38818 s
[2025-07-27 20:45:30] 2025-07-28 00:44:57,323 | INFO     | nevents: 400
[2025-07-27 20:45:30] 2025-07-28 00:44:57,323 | INFO     | neventsw: 0
[2025-07-27 20:45:30] 2025-07-28 00:44:57,324 | INFO     | pid: 651708
[2025-07-27 20:45:30] 2025-07-28 00:44:57,324 | INFO     | pgrp: 651708
[2025-07-27 20:45:30] 2025-07-28 00:44:57,324 | INFO     | corecount: 8
[2025-07-27 20:45:30] 2025-07-28 00:44:57,324 | INFO     | event service: False
[2025-07-27 20:45:30] 2025-07-28 00:44:57,324 | INFO     | sizes: {0: 2396647, 1: 2397503, 9: 2397765, 12: 2397793, 9392: 2426504, 9393: 2435686, 9399: 2435888}
[2025-07-27 20:45:30] 2025-07-28 00:44:57,324 | INFO     | --------------------------------------------------
[2025-07-27 20:45:30] 2025-07-28 00:44:57,324 | INFO     | 
[2025-07-27 20:45:30] 2025-07-28 00:44:57,324 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 20:45:30] 2025-07-28 00:44:57,344 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,345 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,345 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,345 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,345 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,345 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,345 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,345 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,345 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,345 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,345 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,345 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,346 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,346 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,346 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,346 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,346 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,346 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:45:30] 2025-07-28 00:44:57,346 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,346 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:45:30] 2025-07-28 00:44:57,346 | INFO     | job 6747548890 has completed (purged errors)
[2025-07-27 20:45:30] 2025-07-28 00:44:57,346 | INFO     | overall cleanup function is called
[2025-07-27 20:45:30] 2025-07-28 00:44:57,394 | WARNING  | process 651708 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 20:45:30] 2025-07-28 00:44:57,614 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:45:30] 2025-07-28 00:44:57,857 | INFO     | number of running child processes to parent process 651708: 1
[2025-07-27 20:45:30] 2025-07-28 00:44:57,857 | INFO     | maximum number of monitored processes: 6
[2025-07-27 20:45:30] 2025-07-28 00:44:57,857 | INFO     | aborting job monitoring since job object (job id=6747548890) has expired
[2025-07-27 20:45:30] 2025-07-28 00:44:58,355 | INFO     | --- collectZombieJob: --- 10, [651708]
[2025-07-27 20:45:30] 2025-07-28 00:44:58,355 | INFO     | zombie collector waiting for pid 651708
[2025-07-27 20:45:30] 2025-07-28 00:44:58,355 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:45:30] 2025-07-28 00:44:58,355 | INFO     | collected zombie processes
[2025-07-27 20:45:30] 2025-07-28 00:44:58,356 | INFO     | will attempt to kill all subprocesses of pid=651708
[2025-07-27 20:45:30] 2025-07-28 00:44:58,603 | INFO     | process IDs to be killed: [651708] (in reverse order)
[2025-07-27 20:45:30] 2025-07-28 00:44:58,708 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:45:30] 2025-07-28 00:44:58,708 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:45:30] 2025-07-28 00:44:58,720 | INFO     | did not find any defunct processes belonging to 651708
[2025-07-27 20:45:30] 2025-07-28 00:44:58,730 | INFO     | did not find any defunct processes belonging to 651708
[2025-07-27 20:45:30] 2025-07-28 00:44:58,730 | INFO     | ready for new job
[2025-07-27 20:45:30] 2025-07-28 00:44:58,730 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:45:30] 2025-07-28 00:44:58,731 | INFO     | ***************************************
[2025-07-27 20:45:30] 2025-07-28 00:44:58,731 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:45:30] 2025-07-28 00:44:58,732 | INFO     | ***************************************
[2025-07-27 20:45:30] 2025-07-28 00:44:58,732 | INFO     | 
[2025-07-27 20:45:30] 2025-07-28 00:44:58,734 | INFO     | architecture information:
[2025-07-27 20:45:30] 2025-07-28 00:44:58,735 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:45:30] 2025-07-28 00:44:58,750 | INFO     | cat /etc/os-release:
[2025-07-27 20:45:30] NAME="CentOS Linux"
[2025-07-27 20:45:30] VERSION="7 (Core)"
[2025-07-27 20:45:30] ID="centos"
[2025-07-27 20:45:30] ID_LIKE="rhel fedora"
[2025-07-27 20:45:30] VERSION_ID="7"
[2025-07-27 20:45:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:45:30] ANSI_COLOR="0;31"
[2025-07-27 20:45:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:45:30] HOME_URL="https://www.centos.org/"
[2025-07-27 20:45:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:45:30] 
[2025-07-27 20:45:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:45:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:45:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:45:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:45:30] 
[2025-07-27 20:45:30] 2025-07-28 00:44:58,751 | INFO     | ***************************************
[2025-07-27 20:45:30] 2025-07-28 00:44:59,253 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 20:45:30] 2025-07-28 00:44:59,280 | INFO     | sufficient remaining disk space (86047195136 B)
[2025-07-27 20:45:30] 2025-07-28 00:44:59,280 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:45:30] 2025-07-28 00:44:59,280 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:45:30] 2025-07-28 00:44:59,280 | INFO     | update_server=False
[2025-07-27 20:45:30] 2025-07-28 00:44:59,280 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:45:30] 2025-07-28 00:44:59,281 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:45:30] 2025-07-28 00:44:59,281 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:45:30] 2025-07-28 00:44:59,281 | INFO     | aborting loop
[2025-07-27 20:45:30] 2025-07-28 00:44:59,355 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:45:30] 2025-07-28 00:44:59,485 | INFO     | all payload control threads have been joined
[2025-07-27 20:45:30] 2025-07-28 00:44:59,504 | INFO     | all job control threads have been joined
[2025-07-27 20:45:30] 2025-07-28 00:44:59,988 | INFO     | all data control threads have been joined
[2025-07-27 20:45:30] 2025-07-28 00:45:00,281 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:45:30] 2025-07-28 00:45:00,286 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:45:30] 2025-07-28 00:45:00,287 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:45:30] 2025-07-28 00:45:00,390 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:45:30] 2025-07-28 00:45:00,458 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:45:30] 2025-07-28 00:45:00,490 | INFO     | [payload] control thread has finished
[2025-07-27 20:45:30] 2025-07-28 00:45:00,509 | INFO     | [job] control thread has finished
[2025-07-27 20:45:30] 2025-07-28 00:45:00,993 | INFO     | [data] control thread has finished
[2025-07-27 20:45:30] 2025-07-28 00:45:01,007 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:45:30] 2025-07-28 00:45:01,017 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:45:30] 2025-07-28 00:45:01,037 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:45:30] 2025-07-28 00:45:01,060 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:45:30] 2025-07-28 00:45:01,226 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:45:30] 2025-07-28 00:45:01,241 | INFO     | [job] validate thread has finished
[2025-07-27 20:45:30] 2025-07-28 00:45:01,361 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:45:30] 2025-07-28 00:45:01,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:45:30] 2025-07-28 00:45:05,932 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:45:30] 2025-07-28 00:45:07,568 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139753641826112)>', '<ExcThread(monitor, started 139752917423872)>']
[2025-07-27 20:45:30] 2025-07-28 00:45:12,594 | INFO     | all workflow threads have been joined
[2025-07-27 20:45:30] 2025-07-28 00:45:12,594 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:45:30] 2025-07-28 00:45:12,595 | INFO     | traces error code: 0
[2025-07-27 20:45:30] 2025-07-28 00:45:12,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:45:30] 2025-07-28 00:45:30,262 | INFO     | PID=642426 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 20:45:30] 2025-07-28 00:45:30,263 | INFO     | .. there are 10 such processes running
[2025-07-27 20:45:30] 2025-07-28 00:45:30,263 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:45:30] 2025-07-28 00:45:30,263 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:45:30] 2025-07-28 00:45:30,263 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:45:30] 2025-07-28 00:45:30,263 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:45:30] 2025-07-28 00:45:30,263 | INFO     | [monitor] control thread has ended
[2025-07-27 20:45:30] 2025-07-28 00:45:30,384 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:45:30] 2025-07-28 00:45:30,387 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:45:30] 2025-07-28 00:45:30,390 [wrapper] pilotpid: 642426
[2025-07-27 20:45:30] 2025-07-28 00:45:30,393 [wrapper] Pilot exit status: 0
[2025-07-27 20:45:30] 2025-07-28 00:45:30,408 [wrapper] pandaids: 6747548890
[2025-07-27 20:45:30] 2025-07-28 00:45:30,489 [wrapper] cleanup supervisor_pilot 1155039 642427
[2025-07-27 20:45:30] 2025-07-28 00:45:30,497 [wrapper] Test setup, not cleaning
[2025-07-27 20:45:30] 2025-07-28 00:45:30,500 [wrapper] apfmon messages muted
[2025-07-27 20:45:30] 2025-07-28 00:45:30,502 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:45:30] 2025-07-28 00:45:30,506 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:45:30]  *** Error codes and diagnostics ***
[2025-07-27 20:45:30]     "exeErrorCode": 0,
[2025-07-27 20:45:30]     "exeErrorDiag": "",
[2025-07-27 20:45:30]     "pilotErrorCode": 0,
[2025-07-27 20:45:30]     "pilotErrorDiag": "",
[2025-07-27 20:45:30]  *** Listing of results directory ***
[2025-07-27 20:45:30] total 353440
[2025-07-27 20:45:30] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:55 pilot3.tar.gz
[2025-07-27 20:45:30] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 13:06 queuedata.json
[2025-07-27 20:45:30] -rwx------. 1 boincer umatlas     36292 Jul 27 13:07 runpilot2-wrapper.sh
[2025-07-27 20:45:30] -rw-r--r--. 1 boincer umatlas       100 Jul 27 18:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:45:30] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 18:07 run_atlas
[2025-07-27 20:45:30] -rw-r--r--. 1 boincer umatlas       105 Jul 27 18:07 job.xml
[2025-07-27 20:45:30] -rw-r--r--. 2 boincer umatlas 144087665 Jul 27 18:07 EVNT.45743347._002820.pool.root.1
[2025-07-27 20:45:30] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:07 start_atlas.sh
[2025-07-27 20:45:30] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 18:07 shared
[2025-07-27 20:45:30] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 18:07 input.tar.gz
[2025-07-27 20:45:30] -rw-r--r--. 1 boincer umatlas         0 Jul 27 18:07 boinc_lockfile
[2025-07-27 20:45:30] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 18:07 pandaJob.out
[2025-07-27 20:45:30] -rw-------. 1 boincer umatlas    980117 Jul 27 18:07 agis_schedconf.cvmfs.json
[2025-07-27 20:45:30] -rw-------. 1 boincer umatlas   1593052 Jul 27 18:07 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:45:30] drwx------. 4 boincer umatlas      4096 Jul 27 18:07 pilot3
[2025-07-27 20:45:30] -rw-r--r--. 1 boincer umatlas      6895 Jul 27 20:37 init_data.xml
[2025-07-27 20:45:30] -rw-------. 1 boincer umatlas 211560957 Jul 27 20:44 HITS.45743349._052757.pool.root.1
[2025-07-27 20:45:30] -rw-r--r--. 1 boincer umatlas       529 Jul 27 20:44 boinc_task_state.xml
[2025-07-27 20:45:30] -rw-------. 1 boincer umatlas        95 Jul 27 20:44 pilot_heartbeat.json
[2025-07-27 20:45:30] -rw-------. 1 boincer umatlas      1029 Jul 27 20:44 memory_monitor_summary.json
[2025-07-27 20:45:30] -rw-------. 1 boincer umatlas    346972 Jul 27 20:44 log.45743349._052757.job.log.tgz.1
[2025-07-27 20:45:30] -rw-------. 1 boincer umatlas      7767 Jul 27 20:44 heartbeat.json
[2025-07-27 20:45:30] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 20:45 boinc_mmap_file
[2025-07-27 20:45:30] -rw-r--r--. 1 boincer umatlas        27 Jul 27 20:45 wrapper_checkpoint.txt
[2025-07-27 20:45:30] -rw-------. 1 boincer umatlas       822 Jul 27 20:45 pilotlog.txt
[2025-07-27 20:45:30] -rw-------. 1 boincer umatlas    852446 Jul 27 20:45 log.45743349._052757.job.log.1
[2025-07-27 20:45:30] -rw-------. 1 boincer umatlas       357 Jul 27 20:45 output.list
[2025-07-27 20:45:30] -rw-r--r--. 1 boincer umatlas       620 Jul 27 20:45 runtime_log
[2025-07-27 20:45:30] -rw-------. 1 boincer umatlas   1218560 Jul 27 20:45 result.tar.gz
[2025-07-27 20:45:30] -rw-------. 1 boincer umatlas       655 Jul 27 20:45 TmkLDmQ1J07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4wVLDmidU31m.diag
[2025-07-27 20:45:30] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 20:45 runtime_log.err
[2025-07-27 20:45:30] -rw-r--r--. 1 boincer umatlas     21162 Jul 27 20:45 stderr.txt
[2025-07-27 20:45:30] HITS file was successfully produced:
[2025-07-27 20:45:30] -rw-------. 1 boincer umatlas 211560957 Jul 27 20:44 shared/HITS.pool.root.1
[2025-07-27 20:45:30]  *** Contents of shared directory: ***
[2025-07-27 20:45:30] total 349060
[2025-07-27 20:45:30] -rw-r--r--. 2 boincer umatlas 144087665 Jul 27 18:07 ATLAS.root_0
[2025-07-27 20:45:30] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:07 start_atlas.sh
[2025-07-27 20:45:30] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 18:07 input.tar.gz
[2025-07-27 20:45:30] -rw-------. 1 boincer umatlas 211560957 Jul 27 20:44 HITS.pool.root.1
[2025-07-27 20:45:30] -rw-------. 1 boincer umatlas   1218560 Jul 27 20:45 result.tar.gz
20:45:31 (638076): run_atlas exited; CPU time 38892.403265
20:45:31 (638076): called boinc_finish(0)

</stderr_txt>
]]>

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