Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:28:22 (393775): wrapper (7.7.26015): starting
18:28:22 (393775): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 18:28:22] Arguments: --nthreads 8
[2025-07-27 18:28:22] Threads: 8
[2025-07-27 18:28:22] Checking for CVMFS
[2025-07-27 18:28:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:28:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:28:22] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:28:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:28:23] 2.13.1.0 645510 14784 263100 148827 0 196 37102147 40960000 8967 16776704 0 51879266 99.795 41430724 36980 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 18:28:23] CVMFS is ok
[2025-07-27 18:28:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:28:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:28:23] Further information can be found at the LHC@home message board.
[2025-07-27 18:28:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:28:23] Checking for apptainer binary...
[2025-07-27 18:28:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:28:23] Running /usr/bin/apptainer --version
[2025-07-27 18:28:23] apptainer version 1.4.1-1.el9
[2025-07-27 18:28:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:28:23] c-212-5.aglt2.org
[2025-07-27 18:28:23] apptainer works
[2025-07-27 18:28:23] Set ATHENA_PROC_NUMBER=8
[2025-07-27 18:28:23] Set ATHENA_CORE_NUMBER=8
[2025-07-27 18:28:23] Starting ATLAS job with PandaID=6747548495
[2025-07-27 18:28:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:47:47]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:47:47]  replicas=None
[2025-07-27 19:47:47]  scope=mc23_13p6TeV
[2025-07-27 19:47:47]  status=None
[2025-07-27 19:47:47]  status_code=0
[2025-07-27 19:47:47]  storage_token=
[2025-07-27 19:47:47]  surl=/tmp/boinchome/slots/9/PanDA_Pilot-6747548495/log.45743349._052564.job.log.tgz.1
[2025-07-27 19:47:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/d2/log.45743349._052564.job.log.tgz.1
[2025-07-27 19:47:47]  workdir=None
[2025-07-27 19:47:47] ]
[2025-07-27 19:47:47] 2025-07-27 23:47:07,888 | INFO     | transferring file log.45743349._052564.job.log.tgz.1 from /tmp/boinchome/slots/9/PanDA_Pilot-6747548495/log.45743349._052564.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 19:47:47] 2025-07-27 23:47:07,888 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/9/PanDA_Pilot-6747548495/log.45743349._052564.job.log.tgz.1 /tmp/boinchome/slots/9/log.45743349._052564.job
[2025-07-27 19:47:47] 2025-07-27 23:47:07,908 | INFO     | adding to output.list: log.45743349._052564.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/d2/log.45743349._052564.job.log.tg
[2025-07-27 19:47:47] 2025-07-27 23:47:07,909 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 19:47:47] 2025-07-27 23:47:07,909 | INFO     | summary of transferred files:
[2025-07-27 19:47:47] 2025-07-27 23:47:07,909 | INFO     |  -- lfn=log.45743349._052564.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:47:47] 2025-07-27 23:47:07,909 | INFO     | stage-out finished correctly
[2025-07-27 19:47:47] 2025-07-27 23:47:08,688 | INFO     | PID=399142 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:47:47] 2025-07-27 23:47:08,688 | INFO     | .. there are 14 such processes running
[2025-07-27 19:47:47] 2025-07-27 23:47:08,736 | WARNING  | process 405661 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 19:47:47] 2025-07-27 23:47:08,737 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6747548495/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:47:47] 2025-07-27 23:47:09,105 | INFO     | number of running child processes to parent process 405661: 1
[2025-07-27 19:47:47] 2025-07-27 23:47:09,105 | INFO     | maximum number of monitored processes: 6
[2025-07-27 19:47:47] 2025-07-27 23:47:09,789 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:47:47] 2025-07-27 23:47:10,254 | INFO     | job 6747548495 has state=finished
[2025-07-27 19:47:47] 2025-07-27 23:47:10,254 | INFO     | preparing for final server update for job 6747548495 in state='finished'
[2025-07-27 19:47:47] 2025-07-27 23:47:10,254 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:47:47] 2025-07-27 23:47:10,254 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:47:47] 2025-07-27 23:47:10,255 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:47:47] 2025-07-27 23:47:10,255 | INFO     | job 6747548495 has finished - writing final server update
[2025-07-27 19:47:47] 2025-07-27 23:47:10,255 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:47:47] 2025-07-27 23:47:10,255 | INFO     | executing command: lscpu
[2025-07-27 19:47:47] 2025-07-27 23:47:10,316 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:47:47] 2025-07-27 23:47:11,608 | INFO     | monitor loop #346: job 0:6747548495 is in state 'finished'
[2025-07-27 19:47:47] 2025-07-27 23:47:11,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:47:47] 2025-07-27 23:47:14,112 | INFO     | monitor loop #347: job 0:6747548495 is in state 'finished'
[2025-07-27 19:47:47] 2025-07-27 23:47:14,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:47:47] 2025-07-27 23:47:14,706 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 19:47:47] 2025-07-27 23:47:14,712 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3273.614500000001
[2025-07-27 19:47:47] 2025-07-27 23:47:14,726 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6747548495/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:47:47] 2025-07-27 23:47:14,727 | INFO     | extracted standard info from prmon json
[2025-07-27 19:47:47] 2025-07-27 23:47:14,727 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:47:47] 2025-07-27 23:47:14,727 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:47:47] 2025-07-27 23:47:14,728 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:47:47] 2025-07-27 23:47:14,728 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:47:47] 2025-07-27 23:47:14,729 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:47:47] 2025-07-27 23:47:14,729 | INFO     | sum of square deviations: 106336877.5
[2025-07-27 19:47:47] 2025-07-27 23:47:14,730 | INFO     | sum of deviations: -3857034880.0
[2025-07-27 19:47:47] 2025-07-27 23:47:14,730 | INFO     | mean x: 1753657754.5
[2025-07-27 19:47:47] 2025-07-27 23:47:14,730 | INFO     | mean y: 2578703.1142857145
[2025-07-27 19:47:47] 2025-07-27 23:47:14,730 | INFO     | -- intersect: 63610983291.53168
[2025-07-27 19:47:47] 2025-07-27 23:47:14,730 | INFO     | intersect: 63610983291.53168
[2025-07-27 19:47:47] 2025-07-27 23:47:14,730 | INFO     | chi2: 0.003863238122313175
[2025-07-27 19:47:47] 2025-07-27 23:47:14,730 | INFO     | -- intersect: 63610983291.53168
[2025-07-27 19:47:47] 2025-07-27 23:47:14,730 | INFO     | current memory leak: -36.27 B/s (using 70 data points, chi2=0.00)
[2025-07-27 19:47:47] 2025-07-27 23:47:14,731 | INFO     | could have reported an average CPU frequency of 3291 MHz (6 samples)
[2025-07-27 19:47:47] 2025-07-27 23:47:14,731 | INFO     | ..............................
[2025-07-27 19:47:47] 2025-07-27 23:47:14,731 | INFO     | . Timing measurements:
[2025-07-27 19:47:47] 2025-07-27 23:47:14,731 | INFO     | . get job = 0 s
[2025-07-27 19:47:47] 2025-07-27 23:47:14,731 | INFO     | . initial setup = 2 s
[2025-07-27 19:47:47] 2025-07-27 23:47:14,731 | INFO     | . payload setup = 8 s
[2025-07-27 19:47:47] 2025-07-27 23:47:14,731 | INFO     | . stage-in = 0 s
[2025-07-27 19:47:47] 2025-07-27 23:47:14,731 | INFO     | . payload execution = 4683 s
[2025-07-27 19:47:47] 2025-07-27 23:47:14,731 | INFO     | . stage-out = 0 s
[2025-07-27 19:47:47] 2025-07-27 23:47:14,731 | INFO     | . log creation = 0 s
[2025-07-27 19:47:47] 2025-07-27 23:47:14,731 | INFO     | ..............................
[2025-07-27 19:47:47] 2025-07-27 23:47:14,815 | INFO     | 
[2025-07-27 19:47:47] 2025-07-27 23:47:14,815 | INFO     | job summary report
[2025-07-27 19:47:47] 2025-07-27 23:47:14,815 | INFO     | --------------------------------------------------
[2025-07-27 19:47:47] 2025-07-27 23:47:14,815 | INFO     | PanDA job id: 6747548495
[2025-07-27 19:47:47] 2025-07-27 23:47:14,815 | INFO     | task id: 45743349
[2025-07-27 19:47:47] 2025-07-27 23:47:14,815 | INFO     | errors: (none)
[2025-07-27 19:47:47] 2025-07-27 23:47:14,815 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:47:47] 2025-07-27 23:47:14,815 | INFO     | pilot state: finished 
[2025-07-27 19:47:47] 2025-07-27 23:47:14,816 | INFO     | transexitcode: 0
[2025-07-27 19:47:47] 2025-07-27 23:47:14,816 | INFO     | exeerrorcode: 0
[2025-07-27 19:47:47] 2025-07-27 23:47:14,816 | INFO     | exeerrordiag: 
[2025-07-27 19:47:47] 2025-07-27 23:47:14,816 | INFO     | exitcode: 0
[2025-07-27 19:47:47] 2025-07-27 23:47:14,816 | INFO     | exitmsg: OK
[2025-07-27 19:47:47] 2025-07-27 23:47:14,816 | INFO     | cpuconsumptiontime: 34278 s
[2025-07-27 19:47:47] 2025-07-27 23:47:14,816 | INFO     | nevents: 400
[2025-07-27 19:47:47] 2025-07-27 23:47:14,816 | INFO     | neventsw: 0
[2025-07-27 19:47:47] 2025-07-27 23:47:14,816 | INFO     | pid: 405661
[2025-07-27 19:47:47] 2025-07-27 23:47:14,816 | INFO     | pgrp: 405661
[2025-07-27 19:47:47] 2025-07-27 23:47:14,816 | INFO     | corecount: 8
[2025-07-27 19:47:47] 2025-07-27 23:47:14,816 | INFO     | event service: False
[2025-07-27 19:47:47] 2025-07-27 23:47:14,816 | INFO     | sizes: {0: 2396647, 1: 2397503, 6: 2397765, 12: 2397793, 4696: 2423872, 4697: 2432870, 4699: 2433054, 4704: 2433248}
[2025-07-27 19:47:47] 2025-07-27 23:47:14,816 | INFO     | --------------------------------------------------
[2025-07-27 19:47:47] 2025-07-27 23:47:14,817 | INFO     | 
[2025-07-27 19:47:47] 2025-07-27 23:47:14,817 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-07-27 19:47:47] 2025-07-27 23:47:14,849 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,849 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,849 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,849 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,849 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,849 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,849 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,849 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,849 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,849 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,850 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,850 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,850 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,850 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,850 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,850 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,850 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,850 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:47:47] 2025-07-27 23:47:14,850 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,850 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:47:47] 2025-07-27 23:47:14,850 | INFO     | job 6747548495 has completed (purged errors)
[2025-07-27 19:47:47] 2025-07-27 23:47:14,851 | INFO     | overall cleanup function is called
[2025-07-27 19:47:47] 2025-07-27 23:47:15,858 | INFO     | --- collectZombieJob: --- 10, [405661]
[2025-07-27 19:47:47] 2025-07-27 23:47:15,859 | INFO     | zombie collector waiting for pid 405661
[2025-07-27 19:47:47] 2025-07-27 23:47:15,859 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:47:47] 2025-07-27 23:47:15,859 | INFO     | collected zombie processes
[2025-07-27 19:47:47] 2025-07-27 23:47:15,859 | INFO     | will attempt to kill all subprocesses of pid=405661
[2025-07-27 19:47:47] 2025-07-27 23:47:16,225 | INFO     | process IDs to be killed: [405661] (in reverse order)
[2025-07-27 19:47:47] 2025-07-27 23:47:16,342 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:47:47] 2025-07-27 23:47:16,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:47:47] 2025-07-27 23:47:16,354 | INFO     | did not find any defunct processes belonging to 405661
[2025-07-27 19:47:47] 2025-07-27 23:47:16,363 | INFO     | did not find any defunct processes belonging to 405661
[2025-07-27 19:47:47] 2025-07-27 23:47:16,364 | INFO     | ready for new job
[2025-07-27 19:47:47] 2025-07-27 23:47:16,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:47:47] 2025-07-27 23:47:16,365 | INFO     | ***************************************
[2025-07-27 19:47:47] 2025-07-27 23:47:16,365 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:47:47] 2025-07-27 23:47:16,365 | INFO     | ***************************************
[2025-07-27 19:47:47] 2025-07-27 23:47:16,365 | INFO     | 
[2025-07-27 19:47:47] 2025-07-27 23:47:16,370 | INFO     | architecture information:
[2025-07-27 19:47:47] 2025-07-27 23:47:16,370 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:47:47] 2025-07-27 23:47:16,387 | INFO     | cat /etc/os-release:
[2025-07-27 19:47:47] NAME="CentOS Linux"
[2025-07-27 19:47:47] VERSION="7 (Core)"
[2025-07-27 19:47:47] ID="centos"
[2025-07-27 19:47:47] ID_LIKE="rhel fedora"
[2025-07-27 19:47:47] VERSION_ID="7"
[2025-07-27 19:47:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:47:47] ANSI_COLOR="0;31"
[2025-07-27 19:47:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:47:47] HOME_URL="https://www.centos.org/"
[2025-07-27 19:47:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:47:47] 
[2025-07-27 19:47:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:47:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:47:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:47:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:47:47] 
[2025-07-27 19:47:47] 2025-07-27 23:47:16,387 | INFO     | ***************************************
[2025-07-27 19:47:47] 2025-07-27 23:47:16,890 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-07-27 19:47:47] 2025-07-27 23:47:16,911 | INFO     | sufficient remaining disk space (124904275968 B)
[2025-07-27 19:47:47] 2025-07-27 23:47:16,912 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:47:47] 2025-07-27 23:47:16,912 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:47:47] 2025-07-27 23:47:16,912 | INFO     | update_server=False
[2025-07-27 19:47:47] 2025-07-27 23:47:16,912 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:47:47] 2025-07-27 23:47:16,912 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:47:47] 2025-07-27 23:47:17,557 | INFO     | all payload control threads have been joined
[2025-07-27 19:47:47] 2025-07-27 23:47:17,620 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:47:47] 2025-07-27 23:47:17,621 | INFO     | aborting loop
[2025-07-27 19:47:47] 2025-07-27 23:47:17,790 | INFO     | all data control threads have been joined
[2025-07-27 19:47:47] 2025-07-27 23:47:17,917 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:47:47] 2025-07-27 23:47:18,212 | INFO     | [job] validate thread has finished
[2025-07-27 19:47:47] 2025-07-27 23:47:18,268 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:47:47] 2025-07-27 23:47:18,287 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:47:47] 2025-07-27 23:47:18,357 | INFO     | all job control threads have been joined
[2025-07-27 19:47:47] 2025-07-27 23:47:18,504 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:47:47] 2025-07-27 23:47:18,560 | INFO     | [payload] control thread has finished
[2025-07-27 19:47:47] 2025-07-27 23:47:18,619 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:47:47] 2025-07-27 23:47:18,626 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:47:47] 2025-07-27 23:47:18,796 | INFO     | [data] control thread has finished
[2025-07-27 19:47:47] 2025-07-27 23:47:18,918 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:47:47] 2025-07-27 23:47:19,122 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:47:47] 2025-07-27 23:47:19,304 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:47:47] 2025-07-27 23:47:19,363 | INFO     | [job] control thread has finished
[2025-07-27 19:47:47] 2025-07-27 23:47:19,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:47:47] 2025-07-27 23:47:20,381 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:47:47] 2025-07-27 23:47:20,831 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:47:47] 2025-07-27 23:47:24,387 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:47:47] 2025-07-27 23:47:27,044 | INFO     | job.realtimelogging is not enabled
[2025-07-27 19:47:47] 2025-07-27 23:47:28,048 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:47:47] 2025-07-27 23:47:28,219 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140517771478848)>', '<ExcThread(monitor, started 140517270599424)>']
[2025-07-27 19:47:47] 2025-07-27 23:47:33,245 | INFO     | all workflow threads have been joined
[2025-07-27 19:47:47] 2025-07-27 23:47:33,245 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:47:47] 2025-07-27 23:47:33,245 | INFO     | traces error code: 0
[2025-07-27 19:47:47] 2025-07-27 23:47:33,245 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:47:47] 2025-07-27 23:47:47,184 | INFO     | PID=399142 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 19:47:47] 2025-07-27 23:47:47,184 | INFO     | .. there are 14 such processes running
[2025-07-27 19:47:47] 2025-07-27 23:47:47,185 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:47:47] 2025-07-27 23:47:47,185 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:47:47] 2025-07-27 23:47:47,185 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:47:47] 2025-07-27 23:47:47,185 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:47:47] 2025-07-27 23:47:47,185 | INFO     | [monitor] control thread has ended
[2025-07-27 19:47:47] 2025-07-27 23:47:47,283 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:47:47] 2025-07-27 23:47:47,286 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:47:47] 2025-07-27 23:47:47,289 [wrapper] pilotpid: 399142
[2025-07-27 19:47:47] 2025-07-27 23:47:47,291 [wrapper] Pilot exit status: 0
[2025-07-27 19:47:47] 2025-07-27 23:47:47,305 [wrapper] pandaids: 6747548495
[2025-07-27 19:47:47] 2025-07-27 23:47:47,384 [wrapper] cleanup supervisor_pilot  669493 399143
[2025-07-27 19:47:47] 2025-07-27 23:47:47,390 [wrapper] Test setup, not cleaning
[2025-07-27 19:47:47] 2025-07-27 23:47:47,395 [wrapper] apfmon messages muted
[2025-07-27 19:47:47] 2025-07-27 23:47:47,401 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:47:47] 2025-07-27 23:47:47,404 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:47:47]  *** Error codes and diagnostics ***
[2025-07-27 19:47:47]     "exeErrorCode": 0,
[2025-07-27 19:47:47]     "exeErrorDiag": "",
[2025-07-27 19:47:47]     "pilotErrorCode": 0,
[2025-07-27 19:47:47]     "pilotErrorDiag": "",
[2025-07-27 19:47:47]  *** Listing of results directory ***
[2025-07-27 19:47:47] total 351624
[2025-07-27 19:47:47] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:55 pilot3.tar.gz
[2025-07-27 19:47:47] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 12:59 queuedata.json
[2025-07-27 19:47:47] -rwx------. 1 boincer umatlas     36292 Jul 27 12:59 runpilot2-wrapper.sh
[2025-07-27 19:47:47] -rw-r--r--. 1 boincer umatlas       100 Jul 27 18:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:47:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 18:28 run_atlas
[2025-07-27 19:47:47] -rw-r--r--. 1 boincer umatlas       105 Jul 27 18:28 job.xml
[2025-07-27 19:47:47] -rw-r--r--. 2 boincer umatlas 145118056 Jul 27 18:28 EVNT.45743347._002811.pool.root.1
[2025-07-27 19:47:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:28 start_atlas.sh
[2025-07-27 19:47:47] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 18:28 shared
[2025-07-27 19:47:47] -rw-r--r--. 2 boincer umatlas    542892 Jul 27 18:28 input.tar.gz
[2025-07-27 19:47:47] -rw-r--r--. 1 boincer umatlas         0 Jul 27 18:28 boinc_lockfile
[2025-07-27 19:47:47] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 18:28 pandaJob.out
[2025-07-27 19:47:47] -rw-------. 1 boincer umatlas    980109 Jul 27 18:28 agis_schedconf.cvmfs.json
[2025-07-27 19:47:47] -rw-------. 1 boincer umatlas   1593052 Jul 27 18:28 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:47:47] drwx------. 4 boincer umatlas      4096 Jul 27 18:28 pilot3
[2025-07-27 19:47:47] -rw-r--r--. 1 boincer umatlas      6946 Jul 27 19:45 init_data.xml
[2025-07-27 19:47:47] -rw-------. 1 boincer umatlas 209530338 Jul 27 19:46 HITS.45743349._052564.pool.root.1
[2025-07-27 19:47:47] -rw-r--r--. 1 boincer umatlas       529 Jul 27 19:46 boinc_task_state.xml
[2025-07-27 19:47:47] -rw-------. 1 boincer umatlas      1025 Jul 27 19:47 memory_monitor_summary.json
[2025-07-27 19:47:47] -rw-------. 1 boincer umatlas    306062 Jul 27 19:47 log.45743349._052564.job.log.tgz.1
[2025-07-27 19:47:47] -rw-------. 1 boincer umatlas      7765 Jul 27 19:47 heartbeat.json
[2025-07-27 19:47:47] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:47 boinc_mmap_file
[2025-07-27 19:47:47] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:47 wrapper_checkpoint.txt
[2025-07-27 19:47:47] -rw-------. 1 boincer umatlas       822 Jul 27 19:47 pilotlog.txt
[2025-07-27 19:47:47] -rw-------. 1 boincer umatlas        95 Jul 27 19:47 pilot_heartbeat.json
[2025-07-27 19:47:47] -rw-------. 1 boincer umatlas    461556 Jul 27 19:47 log.45743349._052564.job.log.1
[2025-07-27 19:47:47] -rw-------. 1 boincer umatlas       357 Jul 27 19:47 output.list
[2025-07-27 19:47:47] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:47 runtime_log
[2025-07-27 19:47:47] -rw-------. 1 boincer umatlas    788480 Jul 27 19:47 result.tar.gz
[2025-07-27 19:47:47] -rw-------. 1 boincer umatlas       650 Jul 27 19:47 Yf5KDmRtJ07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeuVLDmQtUPkn.diag
[2025-07-27 19:47:47] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 19:47 runtime_log.err
[2025-07-27 19:47:47] -rw-r--r--. 1 boincer umatlas     21951 Jul 27 19:47 stderr.txt
[2025-07-27 19:47:47] HITS file was successfully produced:
[2025-07-27 19:47:47] -rw-------. 1 boincer umatlas 209530338 Jul 27 19:46 shared/HITS.pool.root.1
[2025-07-27 19:47:47]  *** Contents of shared directory: ***
[2025-07-27 19:47:47] total 347668
[2025-07-27 19:47:47] -rw-r--r--. 2 boincer umatlas 145118056 Jul 27 18:28 ATLAS.root_0
[2025-07-27 19:47:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:28 start_atlas.sh
[2025-07-27 19:47:47] -rw-r--r--. 2 boincer umatlas    542892 Jul 27 18:28 input.tar.gz
[2025-07-27 19:47:47] -rw-------. 1 boincer umatlas 209530338 Jul 27 19:46 HITS.pool.root.1
[2025-07-27 19:47:47] -rw-------. 1 boincer umatlas    788480 Jul 27 19:47 result.tar.gz
19:47:49 (393775): run_atlas exited; CPU time 34405.691169
19:47:49 (393775): called boinc_finish(0)

</stderr_txt>
]]>

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