Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:59:55 (296901): wrapper (7.7.26015): starting
11:59:55 (296901): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 11:59:55] Arguments: --nthreads 4
[2025-07-28 11:59:55] Threads: 4
[2025-07-28 11:59:55] Checking for CVMFS
[2025-07-28 11:59:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 11:59:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 11:59:55] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 11:59:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 11:59:56] 2.9.2.0 2645308 5384 94620 148843 0 57 35304743 36864001 0 130560 0 4876704 99.992 188656 2127 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 11:59:56] CVMFS is ok
[2025-07-28 11:59:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 11:59:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 11:59:56] Further information can be found at the LHC@home message board.
[2025-07-28 11:59:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 11:59:56] Checking for apptainer binary...
[2025-07-28 11:59:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 11:59:56] Running /usr/bin/apptainer --version
[2025-07-28 11:59:56] apptainer version 1.4.1-1.1
[2025-07-28 11:59:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 11:59:56] thA350
[2025-07-28 11:59:56] apptainer works
[2025-07-28 11:59:56] Set ATHENA_PROC_NUMBER=4
[2025-07-28 11:59:56] Set ATHENA_CORE_NUMBER=4
[2025-07-28 11:59:56] Starting ATLAS job with PandaID=6747548523
[2025-07-28 11:59:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 13:12:15]  *** The last 200 lines of the pilot log: ***
[2025-07-28 13:12:15]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-28 13:12:15]  is_altstaged=None
[2025-07-28 13:12:15]  is_tar=False
[2025-07-28 13:12:15]  lfn=log.45743349._052592.job.log.tgz.1
[2025-07-28 13:12:15]  mtime=0
[2025-07-28 13:12:15]  protocol_id=None
[2025-07-28 13:12:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 13:12:15]  replicas=None
[2025-07-28 13:12:15]  scope=mc23_13p6TeV
[2025-07-28 13:12:15]  status=None
[2025-07-28 13:12:15]  status_code=0
[2025-07-28 13:12:15]  storage_token=
[2025-07-28 13:12:15]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6747548523/log.45743349._052592.job.log.tgz.1
[2025-07-28 13:12:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c7/cb/log.45743349._052592.job.log.tgz.1
[2025-07-28 13:12:15]  workdir=None
[2025-07-28 13:12:15] ]
[2025-07-28 13:12:15] 2025-07-28 11:11:38,522 | INFO     | transferring file log.45743349._052592.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6747548523/log.45743349._052592.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 13:12:15] 2025-07-28 11:11:38,522 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6747548523/log.45743349._052592.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0525
[2025-07-28 13:12:15] 2025-07-28 11:11:38,535 | INFO     | adding to output.list: log.45743349._052592.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c7/cb/log.45743349._052592.job.log.tg
[2025-07-28 13:12:15] 2025-07-28 11:11:38,535 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 13:12:15] 2025-07-28 11:11:38,535 | INFO     | summary of transferred files:
[2025-07-28 13:12:15] 2025-07-28 11:11:38,535 | INFO     |  -- lfn=log.45743349._052592.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 13:12:15] 2025-07-28 11:11:38,535 | INFO     | stage-out finished correctly
[2025-07-28 13:12:15] 2025-07-28 11:11:39,610 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 13:12:15] 2025-07-28 11:11:41,514 | INFO     | job 6747548523 has state=finished
[2025-07-28 13:12:15] 2025-07-28 11:11:41,514 | INFO     | preparing for final server update for job 6747548523 in state='finished'
[2025-07-28 13:12:15] 2025-07-28 11:11:41,515 | INFO     | this job has now completed (state=finished)
[2025-07-28 13:12:15] 2025-07-28 11:11:41,515 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 13:12:15] 2025-07-28 11:11:41,515 | INFO     | log transfer has been attempted: DONE
[2025-07-28 13:12:15] 2025-07-28 11:11:41,515 | INFO     | job 6747548523 has finished - writing final server update
[2025-07-28 13:12:15] 2025-07-28 11:11:41,515 | INFO     | total number of processed events: 400 (read)
[2025-07-28 13:12:15] 2025-07-28 11:11:41,516 | INFO     | executing command: lscpu
[2025-07-28 13:12:15] 2025-07-28 11:11:41,532 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 13:12:15] 2025-07-28 11:11:43,944 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 13:12:15] 2025-07-28 11:11:43,945 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3661.8473124999996
[2025-07-28 13:12:15] 2025-07-28 11:11:43,947 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747548523/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 13:12:15] 2025-07-28 11:11:43,947 | INFO     | extracted standard info from prmon json
[2025-07-28 13:12:15] 2025-07-28 11:11:43,947 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 13:12:15] 2025-07-28 11:11:43,947 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 13:12:15] 2025-07-28 11:11:43,947 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 13:12:15] 2025-07-28 11:11:43,947 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 13:12:15] 2025-07-28 11:11:43,948 | INFO     | fitting pss+swap vs Time
[2025-07-28 13:12:15] 2025-07-28 11:11:43,948 | INFO     | sum of square deviations: 81266640.0
[2025-07-28 13:12:15] 2025-07-28 11:11:43,948 | INFO     | sum of deviations: -153582506.0
[2025-07-28 13:12:15] 2025-07-28 11:11:43,948 | INFO     | mean x: 1753699048.5
[2025-07-28 13:12:15] 2025-07-28 11:11:43,948 | INFO     | mean y: 2424346.625
[2025-07-28 13:12:15] 2025-07-28 11:11:43,948 | INFO     | -- intersect: 3316668600.3365545
[2025-07-28 13:12:15] 2025-07-28 11:11:43,948 | INFO     | intersect: 3316668600.3365545
[2025-07-28 13:12:15] 2025-07-28 11:11:43,948 | INFO     | chi2: 0.032663939242055184
[2025-07-28 13:12:15] 2025-07-28 11:11:43,948 | INFO     | -- intersect: 3316668600.3365545
[2025-07-28 13:12:15] 2025-07-28 11:11:43,948 | INFO     | current memory leak: -1.89 B/s (using 64 data points, chi2=0.03)
[2025-07-28 13:12:15] 2025-07-28 11:11:43,948 | INFO     | could have reported an average CPU frequency of 3847 MHz (6 samples)
[2025-07-28 13:12:15] 2025-07-28 11:11:43,948 | INFO     | ..............................
[2025-07-28 13:12:15] 2025-07-28 11:11:43,949 | INFO     | . Timing measurements:
[2025-07-28 13:12:15] 2025-07-28 11:11:43,949 | INFO     | . get job = 0 s
[2025-07-28 13:12:15] 2025-07-28 11:11:43,949 | INFO     | . initial setup = 1 s
[2025-07-28 13:12:15] 2025-07-28 11:11:43,949 | INFO     | . payload setup = 3 s
[2025-07-28 13:12:15] 2025-07-28 11:11:43,949 | INFO     | . stage-in = 0 s
[2025-07-28 13:12:15] 2025-07-28 11:11:43,949 | INFO     | . payload execution = 4275 s
[2025-07-28 13:12:15] 2025-07-28 11:11:43,949 | INFO     | . stage-out = 0 s
[2025-07-28 13:12:15] 2025-07-28 11:11:43,949 | INFO     | . log creation = 0 s
[2025-07-28 13:12:15] 2025-07-28 11:11:43,949 | INFO     | ..............................
[2025-07-28 13:12:15] 2025-07-28 11:11:43,979 | INFO     | 
[2025-07-28 13:12:15] 2025-07-28 11:11:43,979 | INFO     | job summary report
[2025-07-28 13:12:15] 2025-07-28 11:11:43,979 | INFO     | --------------------------------------------------
[2025-07-28 13:12:15] 2025-07-28 11:11:43,979 | INFO     | PanDA job id: 6747548523
[2025-07-28 13:12:15] 2025-07-28 11:11:43,979 | INFO     | task id: 45743349
[2025-07-28 13:12:15] 2025-07-28 11:11:43,979 | INFO     | errors: (none)
[2025-07-28 13:12:15] 2025-07-28 11:11:43,979 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 13:12:15] 2025-07-28 11:11:43,979 | INFO     | pilot state: finished 
[2025-07-28 13:12:15] 2025-07-28 11:11:43,979 | INFO     | transexitcode: 0
[2025-07-28 13:12:15] 2025-07-28 11:11:43,979 | INFO     | exeerrorcode: 0
[2025-07-28 13:12:15] 2025-07-28 11:11:43,979 | INFO     | exeerrordiag: 
[2025-07-28 13:12:15] 2025-07-28 11:11:43,979 | INFO     | exitcode: 0
[2025-07-28 13:12:15] 2025-07-28 11:11:43,980 | INFO     | exitmsg: OK
[2025-07-28 13:12:15] 2025-07-28 11:11:43,980 | INFO     | cpuconsumptiontime: 16158 s
[2025-07-28 13:12:15] 2025-07-28 11:11:43,980 | INFO     | nevents: 400
[2025-07-28 13:12:15] 2025-07-28 11:11:43,980 | INFO     | neventsw: 0
[2025-07-28 13:12:15] 2025-07-28 11:11:43,980 | INFO     | pid: 307242
[2025-07-28 13:12:15] 2025-07-28 11:11:43,980 | INFO     | pgrp: 307242
[2025-07-28 13:12:15] 2025-07-28 11:11:43,980 | INFO     | corecount: 4
[2025-07-28 13:12:15] 2025-07-28 11:11:43,980 | INFO     | event service: False
[2025-07-28 13:12:15] 2025-07-28 11:11:43,980 | INFO     | sizes: {0: 2397478, 3: 2397740, 11: 2397768, 4283: 2423972, 4284: 2432976, 4285: 2433032, 4289: 2433354}
[2025-07-28 13:12:15] 2025-07-28 11:11:43,980 | INFO     | --------------------------------------------------
[2025-07-28 13:12:15] 2025-07-28 11:11:43,980 | INFO     | 
[2025-07-28 13:12:15] 2025-07-28 11:11:43,980 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 13:12:15] 2025-07-28 11:11:43,993 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,993 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,993 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,993 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,993 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,993 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,993 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,994 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,994 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,994 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,994 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,994 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,994 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,994 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,994 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,994 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,994 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,994 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 13:12:15] 2025-07-28 11:11:43,994 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,994 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 13:12:15] 2025-07-28 11:11:43,994 | INFO     | job 6747548523 has completed (purged errors)
[2025-07-28 13:12:15] 2025-07-28 11:11:43,994 | INFO     | overall cleanup function is called
[2025-07-28 13:12:15] 2025-07-28 11:11:44,583 | WARNING  | process 307242 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 13:12:15] 2025-07-28 11:11:44,612 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 13:12:15] 2025-07-28 11:11:44,649 | INFO     | number of running child processes to parent process 307242: 1
[2025-07-28 13:12:15] 2025-07-28 11:11:44,649 | INFO     | maximum number of monitored processes: 6
[2025-07-28 13:12:15] 2025-07-28 11:11:44,649 | INFO     | aborting job monitoring since job object (job id=6747548523) has expired
[2025-07-28 13:12:15] 2025-07-28 11:11:45,001 | INFO     | --- collectZombieJob: --- 10, [307242]
[2025-07-28 13:12:15] 2025-07-28 11:11:45,001 | INFO     | zombie collector waiting for pid 307242
[2025-07-28 13:12:15] 2025-07-28 11:11:45,001 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 13:12:15] 2025-07-28 11:11:45,001 | INFO     | collected zombie processes
[2025-07-28 13:12:15] 2025-07-28 11:11:45,001 | INFO     | will attempt to kill all subprocesses of pid=307242
[2025-07-28 13:12:15] 2025-07-28 11:11:45,042 | INFO     | process IDs to be killed: [307242] (in reverse order)
[2025-07-28 13:12:15] 2025-07-28 11:11:45,067 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 13:12:15] 2025-07-28 11:11:45,067 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 13:12:15] 2025-07-28 11:11:45,069 | INFO     | did not find any defunct processes belonging to 307242
[2025-07-28 13:12:15] 2025-07-28 11:11:45,070 | INFO     | did not find any defunct processes belonging to 307242
[2025-07-28 13:12:15] 2025-07-28 11:11:45,070 | INFO     | ready for new job
[2025-07-28 13:12:15] 2025-07-28 11:11:45,070 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 13:12:15] 2025-07-28 11:11:45,070 | INFO     | ***************************************
[2025-07-28 13:12:15] 2025-07-28 11:11:45,070 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 13:12:15] 2025-07-28 11:11:45,070 | INFO     | ***************************************
[2025-07-28 13:12:15] 2025-07-28 11:11:45,070 | INFO     | 
[2025-07-28 13:12:15] 2025-07-28 11:11:45,071 | INFO     | architecture information:
[2025-07-28 13:12:15] 2025-07-28 11:11:45,071 | INFO     | executing command: cat /etc/os-release
[2025-07-28 13:12:15] 2025-07-28 11:11:45,080 | INFO     | cat /etc/os-release:
[2025-07-28 13:12:15] NAME="CentOS Linux"
[2025-07-28 13:12:15] VERSION="7 (Core)"
[2025-07-28 13:12:15] ID="centos"
[2025-07-28 13:12:15] ID_LIKE="rhel fedora"
[2025-07-28 13:12:15] VERSION_ID="7"
[2025-07-28 13:12:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 13:12:15] ANSI_COLOR="0;31"
[2025-07-28 13:12:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 13:12:15] HOME_URL="https://www.centos.org/"
[2025-07-28 13:12:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 13:12:15] 
[2025-07-28 13:12:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 13:12:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 13:12:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 13:12:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 13:12:15] 
[2025-07-28 13:12:15] 2025-07-28 11:11:45,080 | INFO     | ***************************************
[2025-07-28 13:12:15] 2025-07-28 11:11:45,583 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 13:12:15] 2025-07-28 11:11:45,597 | INFO     | sufficient remaining disk space (366064173056 B)
[2025-07-28 13:12:15] 2025-07-28 11:11:45,597 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 13:12:15] 2025-07-28 11:11:45,597 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 13:12:15] 2025-07-28 11:11:45,597 | INFO     | update_server=False
[2025-07-28 13:12:15] 2025-07-28 11:11:45,597 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 13:12:15] 2025-07-28 11:11:45,597 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 13:12:15] 2025-07-28 11:11:45,597 | INFO     | will abort loop
[2025-07-28 13:12:15] 2025-07-28 11:11:45,597 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 13:12:15] 2025-07-28 11:11:45,648 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 13:12:15] 2025-07-28 11:11:46,364 | INFO     | all job control threads have been joined
[2025-07-28 13:12:15] 2025-07-28 11:11:46,579 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 13:12:15] 2025-07-28 11:11:46,603 | INFO     | [job] retrieve thread has finished
[2025-07-28 13:12:15] 2025-07-28 11:11:46,603 | INFO     | [job] job monitor thread has finished
[2025-07-28 13:12:15] 2025-07-28 11:11:46,603 | INFO     | [job] queue monitor thread has finished
[2025-07-28 13:12:15] 2025-07-28 11:11:46,615 | INFO     | all payload control threads have been joined
[2025-07-28 13:12:15] 2025-07-28 11:11:46,655 | INFO     | all data control threads have been joined
[2025-07-28 13:12:15] 2025-07-28 11:11:46,754 | INFO     | [payload] failed_post thread has finished
[2025-07-28 13:12:15] 2025-07-28 11:11:46,789 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 13:12:15] 2025-07-28 11:11:47,272 | INFO     | [payload] validate_post thread has finished
[2025-07-28 13:12:15] 2025-07-28 11:11:47,370 | INFO     | [job] control thread has finished
[2025-07-28 13:12:15] 2025-07-28 11:11:47,525 | INFO     | [data] copytool_in thread has finished
[2025-07-28 13:12:15] 2025-07-28 11:11:47,620 | INFO     | [payload] control thread has finished
[2025-07-28 13:12:15] 2025-07-28 11:11:47,660 | INFO     | [data] control thread has finished
[2025-07-28 13:12:15] 2025-07-28 11:11:47,770 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 13:12:15] 2025-07-28 11:11:47,917 | INFO     | [job] validate thread has finished
[2025-07-28 13:12:15] 2025-07-28 11:11:47,988 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 13:12:15] 2025-07-28 11:11:48,047 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 13:12:15] 2025-07-28 11:11:48,585 | INFO     | [data] copytool_out thread has finished
[2025-07-28 13:12:15] 2025-07-28 11:11:49,655 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 13:12:15] 2025-07-28 11:11:49,747 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139972874876736)>', '<ExcThread(monitor, started 139972594075392)>']
[2025-07-28 13:12:15] 2025-07-28 11:11:54,773 | INFO     | all workflow threads have been joined
[2025-07-28 13:12:15] 2025-07-28 11:11:54,773 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 13:12:15] 2025-07-28 11:11:54,774 | INFO     | traces error code: 0
[2025-07-28 13:12:15] 2025-07-28 11:11:54,774 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 13:12:15] 2025-07-28 11:12:15,610 | INFO     | PID=300605 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 13:12:15] 2025-07-28 11:12:15,610 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 13:12:15] 2025-07-28 11:12:15,610 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 13:12:15] 2025-07-28 11:12:15,610 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 13:12:15] 2025-07-28 11:12:15,611 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 13:12:15] 2025-07-28 11:12:15,611 | INFO     | [monitor] control thread has ended
[2025-07-28 13:12:15] 2025-07-28 11:12:15,656 [wrapper] ==== pilot stdout END ====
[2025-07-28 13:12:15] 2025-07-28 11:12:15,659 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 13:12:15] 2025-07-28 11:12:15,661 [wrapper] pilotpid: 300605
[2025-07-28 13:12:15] 2025-07-28 11:12:15,663 [wrapper] Pilot exit status: 0
[2025-07-28 13:12:15] 2025-07-28 11:12:15,671 [wrapper] pandaids: 6747548523
[2025-07-28 13:12:15] 2025-07-28 11:12:15,687 [wrapper] cleanup supervisor_pilot  317430 300606
[2025-07-28 13:12:15] 2025-07-28 11:12:15,690 [wrapper] Test setup, not cleaning
[2025-07-28 13:12:15] 2025-07-28 11:12:15,692 [wrapper] apfmon messages muted
[2025-07-28 13:12:15] 2025-07-28 11:12:15,694 [wrapper] ==== wrapper stdout END ====
[2025-07-28 13:12:15] 2025-07-28 11:12:15,697 [wrapper] ==== wrapper stderr END ====
[2025-07-28 13:12:15]  *** Error codes and diagnostics ***
[2025-07-28 13:12:15]     "exeErrorCode": 0,
[2025-07-28 13:12:15]     "exeErrorDiag": "",
[2025-07-28 13:12:15]     "pilotErrorCode": 0,
[2025-07-28 13:12:15]     "pilotErrorDiag": "",
[2025-07-28 13:12:15]  *** Listing of results directory ***
[2025-07-28 13:12:15] total 346080
[2025-07-28 13:12:15] -rw-r--r-- 1 boinc boinc    530466 Jul 27 18:55 pilot3.tar.gz
[2025-07-28 13:12:15] -rw-r--r-- 1 boinc boinc      5112 Jul 27 18:59 queuedata.json
[2025-07-28 13:12:15] -rwx------ 1 boinc boinc     36292 Jul 27 18:59 runpilot2-wrapper.sh
[2025-07-28 13:12:15] -rw-r--r-- 1 boinc boinc       100 Jul 28 11:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 13:12:15] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 11:59 run_atlas
[2025-07-28 13:12:15] -rw-r--r-- 1 boinc boinc       105 Jul 28 11:59 job.xml
[2025-07-28 13:12:15] -rw-r--r-- 2 boinc boinc 142075719 Jul 28 11:59 EVNT.45743347._002813.pool.root.1
[2025-07-28 13:12:15] -rw-r--r-- 2 boinc boinc    542892 Jul 28 11:59 input.tar.gz
[2025-07-28 13:12:15] -rw-r--r-- 2 boinc boinc     15095 Jul 28 11:59 start_atlas.sh
[2025-07-28 13:12:15] drwxrwx--x 2 boinc boinc      4096 Jul 28 11:59 shared
[2025-07-28 13:12:15] -rw-r--r-- 1 boinc boinc         0 Jul 28 11:59 boinc_setup_complete
[2025-07-28 13:12:15] -rw-r--r-- 1 boinc boinc      6524 Jul 28 11:59 init_data.xml
[2025-07-28 13:12:15] -rw-r--r-- 1 boinc boinc         0 Jul 28 11:59 boinc_lockfile
[2025-07-28 13:12:15] -rw-r--r-- 1 boinc boinc      2563 Jul 28 11:59 pandaJob.out
[2025-07-28 13:12:15] -rw------- 1 boinc boinc    978460 Jul 28 12:00 agis_schedconf.cvmfs.json
[2025-07-28 13:12:15] -rw------- 1 boinc boinc   1593052 Jul 28 12:00 agis_ddmendpoints.agis.ALL.json
[2025-07-28 13:12:15] drwx------ 4 boinc boinc      4096 Jul 28 12:00 pilot3
[2025-07-28 13:12:15] -rw------- 1 boinc boinc 207117618 Jul 28 13:11 HITS.45743349._052592.pool.root.1
[2025-07-28 13:12:15] -rw-r--r-- 1 boinc boinc       529 Jul 28 13:11 boinc_task_state.xml
[2025-07-28 13:12:15] -rw------- 1 boinc boinc        95 Jul 28 13:11 pilot_heartbeat.json
[2025-07-28 13:12:15] -rw------- 1 boinc boinc      1016 Jul 28 13:11 memory_monitor_summary.json
[2025-07-28 13:12:15] -rw------- 1 boinc boinc    235176 Jul 28 13:11 log.45743349._052592.job.log.tgz.1
[2025-07-28 13:12:15] -rw------- 1 boinc boinc      7742 Jul 28 13:11 heartbeat.json
[2025-07-28 13:12:15] -rw-r--r-- 1 boinc boinc        27 Jul 28 13:11 wrapper_checkpoint.txt
[2025-07-28 13:12:15] -rw-r--r-- 1 boinc boinc      8192 Jul 28 13:11 boinc_mmap_file
[2025-07-28 13:12:15] -rw------- 1 boinc boinc       746 Jul 28 13:12 pilotlog.txt
[2025-07-28 13:12:15] -rw------- 1 boinc boinc    426009 Jul 28 13:12 log.45743349._052592.job.log.1
[2025-07-28 13:12:15] -rw------- 1 boinc boinc       357 Jul 28 13:12 output.list
[2025-07-28 13:12:15] -rw-r--r-- 1 boinc boinc       620 Jul 28 13:12 runtime_log
[2025-07-28 13:12:15] -rw------- 1 boinc boinc    675840 Jul 28 13:12 result.tar.gz
[2025-07-28 13:12:15] -rw-r--r-- 1 boinc boinc      8734 Jul 28 13:12 runtime_log.err
[2025-07-28 13:12:15] -rw------- 1 boinc boinc       658 Jul 28 13:12 HHaLDmRtJ07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4uVLDmfvsItn.diag
[2025-07-28 13:12:15] -rw-r--r-- 1 boinc boinc     21436 Jul 28 13:12 stderr.txt
[2025-07-28 13:12:15] HITS file was successfully produced:
[2025-07-28 13:12:15] -rw------- 1 boinc boinc 207117618 Jul 28 13:11 shared/HITS.pool.root.1
[2025-07-28 13:12:15]  *** Contents of shared directory: ***
[2025-07-28 13:12:15] total 342228
[2025-07-28 13:12:15] -rw-r--r-- 2 boinc boinc 142075719 Jul 28 11:59 ATLAS.root_0
[2025-07-28 13:12:15] -rw-r--r-- 2 boinc boinc    542892 Jul 28 11:59 input.tar.gz
[2025-07-28 13:12:15] -rw-r--r-- 2 boinc boinc     15095 Jul 28 11:59 start_atlas.sh
[2025-07-28 13:12:15] -rw------- 1 boinc boinc 207117618 Jul 28 13:11 HITS.pool.root.1
[2025-07-28 13:12:15] -rw------- 1 boinc boinc    675840 Jul 28 13:12 result.tar.gz
13:12:16 (296901): run_atlas exited; CPU time 16170.795656
13:12:16 (296901): called boinc_finish(0)

</stderr_txt>
]]>

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