Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:05:52 (3009999): wrapper (7.7.26015): starting
18:05:52 (3009999): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 18:05:52] Arguments: --nthreads 8
[2025-07-27 18:05:52] Threads: 8
[2025-07-27 18:05:52] Checking for CVMFS
[2025-07-27 18:05:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:05:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:05:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:05:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:05:53] 2.13.1.0 672044 14735 153884 148826 1 65 24563203 40960001 10408 16776704 0 46823479 99.886 26271869 43593 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 18:05:53] CVMFS is ok
[2025-07-27 18:05:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:05:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:05:53] Further information can be found at the LHC@home message board.
[2025-07-27 18:05:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:05:53] Checking for apptainer binary...
[2025-07-27 18:05:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:05:53] Running /usr/bin/apptainer --version
[2025-07-27 18:05:53] apptainer version 1.4.1-1.el9
[2025-07-27 18:05:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:05:53] c-212-3.aglt2.org
[2025-07-27 18:05:53] apptainer works
[2025-07-27 18:05:53] Set ATHENA_PROC_NUMBER=8
[2025-07-27 18:05:53] Set ATHENA_CORE_NUMBER=8
[2025-07-27 18:05:53] Starting ATLAS job with PandaID=6747548861
[2025-07-27 18:05:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:33:00]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:33:00]  mtime=0
[2025-07-27 19:33:00]  protocol_id=None
[2025-07-27 19:33:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 19:33:00]  replicas=None
[2025-07-27 19:33:00]  scope=mc23_13p6TeV
[2025-07-27 19:33:00]  status=None
[2025-07-27 19:33:00]  status_code=0
[2025-07-27 19:33:00]  storage_token=
[2025-07-27 19:33:00]  surl=/tmp/boinchome/slots/6/PanDA_Pilot-6747548861/log.45743349._052728.job.log.tgz.1
[2025-07-27 19:33:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/15/log.45743349._052728.job.log.tgz.1
[2025-07-27 19:33:00]  workdir=None
[2025-07-27 19:33:00] ]
[2025-07-27 19:33:00] 2025-07-27 23:32:19,663 | INFO     | transferring file log.45743349._052728.job.log.tgz.1 from /tmp/boinchome/slots/6/PanDA_Pilot-6747548861/log.45743349._052728.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 19:33:00] 2025-07-27 23:32:19,663 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/6/PanDA_Pilot-6747548861/log.45743349._052728.job.log.tgz.1 /tmp/boinchome/slots/6/log.45743349._052728.job
[2025-07-27 19:33:00] 2025-07-27 23:32:19,684 | INFO     | adding to output.list: log.45743349._052728.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/15/log.45743349._052728.job.log.tg
[2025-07-27 19:33:00] 2025-07-27 23:32:19,685 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 19:33:00] 2025-07-27 23:32:19,685 | INFO     | summary of transferred files:
[2025-07-27 19:33:00] 2025-07-27 23:32:19,685 | INFO     |  -- lfn=log.45743349._052728.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:33:00] 2025-07-27 23:32:19,685 | INFO     | stage-out finished correctly
[2025-07-27 19:33:00] 2025-07-27 23:32:20,474 | INFO     | 5175s have passed since pilot start - server update state is 'RUNNING'
[2025-07-27 19:33:00] 2025-07-27 23:32:21,238 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:33:00] 2025-07-27 23:32:23,156 | WARNING  | process 3022479 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 19:33:00] 2025-07-27 23:32:23,156 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6747548861/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:33:00] 2025-07-27 23:32:23,294 | INFO     | job 6747548861 has state=finished
[2025-07-27 19:33:00] 2025-07-27 23:32:23,295 | INFO     | preparing for final server update for job 6747548861 in state='finished'
[2025-07-27 19:33:00] 2025-07-27 23:32:23,296 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:33:00] 2025-07-27 23:32:23,296 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:33:00] 2025-07-27 23:32:23,296 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:33:00] 2025-07-27 23:32:23,296 | INFO     | job 6747548861 has finished - writing final server update
[2025-07-27 19:33:00] 2025-07-27 23:32:23,297 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:33:00] 2025-07-27 23:32:23,298 | INFO     | executing command: lscpu
[2025-07-27 19:33:00] 2025-07-27 23:32:23,372 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:33:00] 2025-07-27 23:32:23,565 | INFO     | number of running child processes to parent process 3022479: 1
[2025-07-27 19:33:00] 2025-07-27 23:32:23,566 | INFO     | maximum number of monitored processes: 6
[2025-07-27 19:33:00] 2025-07-27 23:32:26,069 | INFO     | monitor loop #379: job 0:6747548861 is in state 'finished'
[2025-07-27 19:33:00] 2025-07-27 23:32:26,069 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:33:00] 2025-07-27 23:32:28,281 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 19:33:00] 2025-07-27 23:32:28,287 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3299.7754270833325
[2025-07-27 19:33:00] 2025-07-27 23:32:28,306 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6747548861/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:33:00] 2025-07-27 23:32:28,307 | INFO     | extracted standard info from prmon json
[2025-07-27 19:33:00] 2025-07-27 23:32:28,307 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:33:00] 2025-07-27 23:32:28,307 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:33:00] 2025-07-27 23:32:28,307 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:33:00] 2025-07-27 23:32:28,307 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:33:00] 2025-07-27 23:32:28,310 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:33:00] 2025-07-27 23:32:28,310 | INFO     | sum of square deviations: 147126479.5
[2025-07-27 19:33:00] 2025-07-27 23:32:28,311 | INFO     | sum of deviations: -1855443710.0000002
[2025-07-27 19:33:00] 2025-07-27 23:32:28,311 | INFO     | mean x: 1753656658.5
[2025-07-27 19:33:00] 2025-07-27 23:32:28,311 | INFO     | mean y: 2526880.8974358975
[2025-07-27 19:33:00] 2025-07-27 23:32:28,311 | INFO     | -- intersect: 22118268571.79709
[2025-07-27 19:33:00] 2025-07-27 23:32:28,311 | INFO     | intersect: 22118268571.79709
[2025-07-27 19:33:00] 2025-07-27 23:32:28,312 | INFO     | chi2: 0.04577152010890561
[2025-07-27 19:33:00] 2025-07-27 23:32:28,312 | INFO     | -- intersect: 22118268571.79709
[2025-07-27 19:33:00] 2025-07-27 23:32:28,312 | INFO     | current memory leak: -12.61 B/s (using 78 data points, chi2=0.05)
[2025-07-27 19:33:00] 2025-07-27 23:32:28,312 | INFO     | could have reported an average CPU frequency of 3292 MHz (6 samples)
[2025-07-27 19:33:00] 2025-07-27 23:32:28,313 | INFO     | ..............................
[2025-07-27 19:33:00] 2025-07-27 23:32:28,313 | INFO     | . Timing measurements:
[2025-07-27 19:33:00] 2025-07-27 23:32:28,313 | INFO     | . get job = 0 s
[2025-07-27 19:33:00] 2025-07-27 23:32:28,313 | INFO     | . initial setup = 2 s
[2025-07-27 19:33:00] 2025-07-27 23:32:28,313 | INFO     | . payload setup = 10 s
[2025-07-27 19:33:00] 2025-07-27 23:32:28,313 | INFO     | . stage-in = 0 s
[2025-07-27 19:33:00] 2025-07-27 23:32:28,313 | INFO     | . payload execution = 5138 s
[2025-07-27 19:33:00] 2025-07-27 23:32:28,313 | INFO     | . stage-out = 0 s
[2025-07-27 19:33:00] 2025-07-27 23:32:28,313 | INFO     | . log creation = 0 s
[2025-07-27 19:33:00] 2025-07-27 23:32:28,313 | INFO     | ..............................
[2025-07-27 19:33:00] 2025-07-27 23:32:28,398 | INFO     | 
[2025-07-27 19:33:00] 2025-07-27 23:32:28,399 | INFO     | job summary report
[2025-07-27 19:33:00] 2025-07-27 23:32:28,399 | INFO     | --------------------------------------------------
[2025-07-27 19:33:00] 2025-07-27 23:32:28,399 | INFO     | PanDA job id: 6747548861
[2025-07-27 19:33:00] 2025-07-27 23:32:28,399 | INFO     | task id: 45743349
[2025-07-27 19:33:00] 2025-07-27 23:32:28,399 | INFO     | errors: (none)
[2025-07-27 19:33:00] 2025-07-27 23:32:28,399 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:33:00] 2025-07-27 23:32:28,399 | INFO     | pilot state: finished 
[2025-07-27 19:33:00] 2025-07-27 23:32:28,399 | INFO     | transexitcode: 0
[2025-07-27 19:33:00] 2025-07-27 23:32:28,400 | INFO     | exeerrorcode: 0
[2025-07-27 19:33:00] 2025-07-27 23:32:28,400 | INFO     | exeerrordiag: 
[2025-07-27 19:33:00] 2025-07-27 23:32:28,400 | INFO     | exitcode: 0
[2025-07-27 19:33:00] 2025-07-27 23:32:28,400 | INFO     | exitmsg: OK
[2025-07-27 19:33:00] 2025-07-27 23:32:28,400 | INFO     | cpuconsumptiontime: 34831 s
[2025-07-27 19:33:00] 2025-07-27 23:32:28,400 | INFO     | nevents: 400
[2025-07-27 19:33:00] 2025-07-27 23:32:28,400 | INFO     | neventsw: 0
[2025-07-27 19:33:00] 2025-07-27 23:32:28,400 | INFO     | pid: 3022479
[2025-07-27 19:33:00] 2025-07-27 23:32:28,400 | INFO     | pgrp: 3022479
[2025-07-27 19:33:00] 2025-07-27 23:32:28,400 | INFO     | corecount: 8
[2025-07-27 19:33:00] 2025-07-27 23:32:28,400 | INFO     | event service: False
[2025-07-27 19:33:00] 2025-07-27 23:32:28,400 | INFO     | sizes: {0: 2397475, 7: 2397737, 11: 2397765, 5152: 2423989, 5154: 2432987, 5155: 2433043, 5162: 2433365}
[2025-07-27 19:33:00] 2025-07-27 23:32:28,400 | INFO     | --------------------------------------------------
[2025-07-27 19:33:00] 2025-07-27 23:32:28,400 | INFO     | 
[2025-07-27 19:33:00] 2025-07-27 23:32:28,401 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-07-27 19:33:00] 2025-07-27 23:32:28,429 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,430 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,430 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,430 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,430 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,430 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,430 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,430 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,430 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,430 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,430 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,431 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,431 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,431 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,431 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,431 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,431 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,431 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:33:00] 2025-07-27 23:32:28,431 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,431 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:33:00] 2025-07-27 23:32:28,431 | INFO     | job 6747548861 has completed (purged errors)
[2025-07-27 19:33:00] 2025-07-27 23:32:28,431 | INFO     | overall cleanup function is called
[2025-07-27 19:33:00] 2025-07-27 23:32:29,441 | INFO     | --- collectZombieJob: --- 10, [3022479]
[2025-07-27 19:33:00] 2025-07-27 23:32:29,442 | INFO     | zombie collector waiting for pid 3022479
[2025-07-27 19:33:00] 2025-07-27 23:32:29,442 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:33:00] 2025-07-27 23:32:29,442 | INFO     | collected zombie processes
[2025-07-27 19:33:00] 2025-07-27 23:32:29,442 | INFO     | will attempt to kill all subprocesses of pid=3022479
[2025-07-27 19:33:00] 2025-07-27 23:32:29,812 | INFO     | process IDs to be killed: [3022479] (in reverse order)
[2025-07-27 19:33:00] 2025-07-27 23:32:29,941 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:33:00] 2025-07-27 23:32:29,941 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:33:00] 2025-07-27 23:32:29,956 | INFO     | did not find any defunct processes belonging to 3022479
[2025-07-27 19:33:00] 2025-07-27 23:32:29,972 | INFO     | did not find any defunct processes belonging to 3022479
[2025-07-27 19:33:00] 2025-07-27 23:32:29,972 | INFO     | ready for new job
[2025-07-27 19:33:00] 2025-07-27 23:32:29,973 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:33:00] 2025-07-27 23:32:29,975 | INFO     | ***************************************
[2025-07-27 19:33:00] 2025-07-27 23:32:29,977 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:33:00] 2025-07-27 23:32:29,977 | INFO     | ***************************************
[2025-07-27 19:33:00] 2025-07-27 23:32:29,977 | INFO     | 
[2025-07-27 19:33:00] 2025-07-27 23:32:29,983 | INFO     | architecture information:
[2025-07-27 19:33:00] 2025-07-27 23:32:29,983 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:33:00] 2025-07-27 23:32:30,010 | INFO     | cat /etc/os-release:
[2025-07-27 19:33:00] NAME="CentOS Linux"
[2025-07-27 19:33:00] VERSION="7 (Core)"
[2025-07-27 19:33:00] ID="centos"
[2025-07-27 19:33:00] ID_LIKE="rhel fedora"
[2025-07-27 19:33:00] VERSION_ID="7"
[2025-07-27 19:33:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:33:00] ANSI_COLOR="0;31"
[2025-07-27 19:33:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:33:00] HOME_URL="https://www.centos.org/"
[2025-07-27 19:33:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:33:00] 
[2025-07-27 19:33:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:33:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:33:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:33:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:33:00] 
[2025-07-27 19:33:00] 2025-07-27 23:32:30,011 | INFO     | ***************************************
[2025-07-27 19:33:00] 2025-07-27 23:32:30,513 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-07-27 19:33:00] 2025-07-27 23:32:30,535 | INFO     | sufficient remaining disk space (124408299520 B)
[2025-07-27 19:33:00] 2025-07-27 23:32:30,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:33:00] 2025-07-27 23:32:30,536 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:33:00] 2025-07-27 23:32:30,536 | INFO     | update_server=False
[2025-07-27 19:33:00] 2025-07-27 23:32:30,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:33:00] 2025-07-27 23:32:30,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:33:00] 2025-07-27 23:32:30,536 | INFO     | aborting loop
[2025-07-27 19:33:00] 2025-07-27 23:32:30,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:33:00] 2025-07-27 23:32:30,931 | INFO     | all data control threads have been joined
[2025-07-27 19:33:00] 2025-07-27 23:32:31,431 | INFO     | all job control threads have been joined
[2025-07-27 19:33:00] 2025-07-27 23:32:31,527 | INFO     | all payload control threads have been joined
[2025-07-27 19:33:00] 2025-07-27 23:32:31,543 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:33:00] 2025-07-27 23:32:31,544 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:33:00] 2025-07-27 23:32:31,762 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:33:00] 2025-07-27 23:32:31,766 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:33:00] 2025-07-27 23:32:31,769 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:33:00] 2025-07-27 23:32:31,832 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:33:00] 2025-07-27 23:32:31,936 | INFO     | [data] control thread has finished
[2025-07-27 19:33:00] 2025-07-27 23:32:31,968 | INFO     | [job] validate thread has finished
[2025-07-27 19:33:00] 2025-07-27 23:32:32,167 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:33:00] 2025-07-27 23:32:32,354 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:33:00] 2025-07-27 23:32:32,438 | INFO     | [job] control thread has finished
[2025-07-27 19:33:00] 2025-07-27 23:32:32,532 | INFO     | [payload] control thread has finished
[2025-07-27 19:33:00] 2025-07-27 23:32:32,544 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:33:00] 2025-07-27 23:32:32,971 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:33:00] 2025-07-27 23:32:33,409 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:33:00] 2025-07-27 23:32:34,414 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:33:00] 2025-07-27 23:32:35,841 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:33:00] 2025-07-27 23:32:41,370 | INFO     | job.realtimelogging is not enabled
[2025-07-27 19:33:00] 2025-07-27 23:32:42,375 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:33:00] 2025-07-27 23:32:43,456 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140262185969472)>', '<ExcThread(monitor, started 140261510326016)>']
[2025-07-27 19:33:00] 2025-07-27 23:32:48,458 | INFO     | all workflow threads have been joined
[2025-07-27 19:33:00] 2025-07-27 23:32:48,460 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:33:00] 2025-07-27 23:32:48,460 | INFO     | traces error code: 0
[2025-07-27 19:33:00] 2025-07-27 23:32:48,460 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:33:00] 2025-07-27 23:33:00,074 | INFO     | PID=3013603 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:33:00] 2025-07-27 23:33:00,074 | INFO     | .. there are 14 such processes running
[2025-07-27 19:33:00] 2025-07-27 23:33:00,075 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:33:00] 2025-07-27 23:33:00,075 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:33:00] 2025-07-27 23:33:00,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:33:00] 2025-07-27 23:33:00,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:33:00] 2025-07-27 23:33:00,075 | INFO     | [monitor] control thread has ended
[2025-07-27 19:33:00] 2025-07-27 23:33:00,219 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:33:00] 2025-07-27 23:33:00,222 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:33:00] 2025-07-27 23:33:00,225 [wrapper] pilotpid: 3013603
[2025-07-27 19:33:00] 2025-07-27 23:33:00,229 [wrapper] Pilot exit status: 0
[2025-07-27 19:33:00] 2025-07-27 23:33:00,240 [wrapper] pandaids: 6747548861
[2025-07-27 19:33:00] 2025-07-27 23:33:00,328 [wrapper] cleanup supervisor_pilot 3335507 3013604
[2025-07-27 19:33:00] 2025-07-27 23:33:00,332 [wrapper] Test setup, not cleaning
[2025-07-27 19:33:00] 2025-07-27 23:33:00,335 [wrapper] apfmon messages muted
[2025-07-27 19:33:00] 2025-07-27 23:33:00,339 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:33:00] 2025-07-27 23:33:00,343 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:33:00]  *** Error codes and diagnostics ***
[2025-07-27 19:33:00]     "exeErrorCode": 0,
[2025-07-27 19:33:00]     "exeErrorDiag": "",
[2025-07-27 19:33:00]     "pilotErrorCode": 0,
[2025-07-27 19:33:00]     "pilotErrorDiag": "",
[2025-07-27 19:33:00]  *** Listing of results directory ***
[2025-07-27 19:33:00] total 430532
[2025-07-27 19:33:00] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:55 pilot3.tar.gz
[2025-07-27 19:33:00] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 13:06 queuedata.json
[2025-07-27 19:33:00] -rwx------. 1 boincer umatlas     36292 Jul 27 13:07 runpilot2-wrapper.sh
[2025-07-27 19:33:00] -rw-r--r--. 1 boincer umatlas       100 Jul 27 18:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:33:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 18:05 run_atlas
[2025-07-27 19:33:00] -rw-r--r--. 1 boincer umatlas       105 Jul 27 18:05 job.xml
[2025-07-27 19:33:00] -rw-r--r--. 2 boincer umatlas 230551553 Jul 27 18:05 EVNT.45743347._002819.pool.root.1
[2025-07-27 19:33:00] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:05 start_atlas.sh
[2025-07-27 19:33:00] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 18:05 shared
[2025-07-27 19:33:00] -rw-r--r--. 2 boincer umatlas    542901 Jul 27 18:05 input.tar.gz
[2025-07-27 19:33:00] -rw-r--r--. 1 boincer umatlas         0 Jul 27 18:05 boinc_lockfile
[2025-07-27 19:33:00] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 18:05 pandaJob.out
[2025-07-27 19:33:00] -rw-------. 1 boincer umatlas    980117 Jul 27 18:06 agis_schedconf.cvmfs.json
[2025-07-27 19:33:00] -rw-------. 1 boincer umatlas   1593052 Jul 27 18:06 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:33:00] drwx------. 4 boincer umatlas      4096 Jul 27 18:06 pilot3
[2025-07-27 19:33:00] -rw-r--r--. 1 boincer umatlas      6946 Jul 27 19:27 init_data.xml
[2025-07-27 19:33:00] -rw-------. 1 boincer umatlas 204835563 Jul 27 19:31 HITS.45743349._052728.pool.root.1
[2025-07-27 19:33:00] -rw-r--r--. 1 boincer umatlas       530 Jul 27 19:31 boinc_task_state.xml
[2025-07-27 19:33:00] -rw-------. 1 boincer umatlas      1027 Jul 27 19:32 memory_monitor_summary.json
[2025-07-27 19:33:00] -rw-------. 1 boincer umatlas    302232 Jul 27 19:32 log.45743349._052728.job.log.tgz.1
[2025-07-27 19:33:00] -rw-------. 1 boincer umatlas      7764 Jul 27 19:32 heartbeat.json
[2025-07-27 19:33:00] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:32 wrapper_checkpoint.txt
[2025-07-27 19:33:00] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:32 boinc_mmap_file
[2025-07-27 19:33:00] -rw-------. 1 boincer umatlas       823 Jul 27 19:33 pilotlog.txt
[2025-07-27 19:33:00] -rw-------. 1 boincer umatlas        95 Jul 27 19:33 pilot_heartbeat.json
[2025-07-27 19:33:00] -rw-------. 1 boincer umatlas    501340 Jul 27 19:33 log.45743349._052728.job.log.1
[2025-07-27 19:33:00] -rw-------. 1 boincer umatlas       357 Jul 27 19:33 output.list
[2025-07-27 19:33:00] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:33 runtime_log
[2025-07-27 19:33:00] -rw-------. 1 boincer umatlas    819200 Jul 27 19:33 result.tar.gz
[2025-07-27 19:33:00] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 19:33 runtime_log.err
[2025-07-27 19:33:00] -rw-------. 1 boincer umatlas       651 Jul 27 19:33 CKwNDmU1J07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBxVLDm8KaTqm.diag
[2025-07-27 19:33:00] -rw-r--r--. 1 boincer umatlas     21734 Jul 27 19:33 stderr.txt
[2025-07-27 19:33:00] HITS file was successfully produced:
[2025-07-27 19:33:00] -rw-------. 1 boincer umatlas 204835563 Jul 27 19:31 shared/HITS.pool.root.1
[2025-07-27 19:33:00]  *** Contents of shared directory: ***
[2025-07-27 19:33:00] total 426540
[2025-07-27 19:33:00] -rw-r--r--. 2 boincer umatlas 230551553 Jul 27 18:05 ATLAS.root_0
[2025-07-27 19:33:00] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:05 start_atlas.sh
[2025-07-27 19:33:00] -rw-r--r--. 2 boincer umatlas    542901 Jul 27 18:05 input.tar.gz
[2025-07-27 19:33:00] -rw-------. 1 boincer umatlas 204835563 Jul 27 19:31 HITS.pool.root.1
[2025-07-27 19:33:00] -rw-------. 1 boincer umatlas    819200 Jul 27 19:33 result.tar.gz
19:33:02 (3009999): run_atlas exited; CPU time 34972.139314
19:33:02 (3009999): called boinc_finish(0)

</stderr_txt>
]]>

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