Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:03:44 (1992181): wrapper (7.7.26015): starting
18:03:44 (1992181): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 18:03:44] Arguments: --nthreads 8
[2025-07-27 18:03:44] Threads: 8
[2025-07-27 18:03:44] Checking for CVMFS
[2025-07-27 18:03:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:03:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:03:44] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:03:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:03:44] 2.13.1.0 704839 14697 157064 148825 1 196 32359160 40960001 10399 16776704 0 44526719 99.892 17314034 42284 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 18:03:44] CVMFS is ok
[2025-07-27 18:03:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:03:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:03:44] Further information can be found at the LHC@home message board.
[2025-07-27 18:03:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:03:44] Checking for apptainer binary...
[2025-07-27 18:03:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:03:44] Running /usr/bin/apptainer --version
[2025-07-27 18:03:45] apptainer version 1.4.1-1.el9
[2025-07-27 18:03:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:03:45] c-212-4.aglt2.org
[2025-07-27 18:03:45] apptainer works
[2025-07-27 18:03:45] Set ATHENA_PROC_NUMBER=8
[2025-07-27 18:03:45] Set ATHENA_CORE_NUMBER=8
[2025-07-27 18:03:45] Starting ATLAS job with PandaID=6747410622
[2025-07-27 18:03:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:20:16]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:20:16]  scope=mc23_13p6TeV
[2025-07-27 19:20:16]  status=None
[2025-07-27 19:20:16]  status_code=0
[2025-07-27 19:20:16]  storage_token=
[2025-07-27 19:20:16]  surl=/tmp/boinchome/slots/6/PanDA_Pilot-6747410622/log.45743349._047903.job.log.tgz.1
[2025-07-27 19:20:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b6/79/log.45743349._047903.job.log.tgz.1
[2025-07-27 19:20:16]  workdir=None
[2025-07-27 19:20:16] ]
[2025-07-27 19:20:16] 2025-07-27 23:19:14,659 | INFO     | transferring file log.45743349._047903.job.log.tgz.1 from /tmp/boinchome/slots/6/PanDA_Pilot-6747410622/log.45743349._047903.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 19:20:16] 2025-07-27 23:19:14,660 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/6/PanDA_Pilot-6747410622/log.45743349._047903.job.log.tgz.1 /tmp/boinchome/slots/6/log.45743349._047903.job
[2025-07-27 19:20:16] 2025-07-27 23:19:14,695 | INFO     | adding to output.list: log.45743349._047903.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b6/79/log.45743349._047903.job.log.tg
[2025-07-27 19:20:16] 2025-07-27 23:19:14,696 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 19:20:16] 2025-07-27 23:19:14,696 | INFO     | summary of transferred files:
[2025-07-27 19:20:16] 2025-07-27 23:19:14,697 | INFO     |  -- lfn=log.45743349._047903.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:20:16] 2025-07-27 23:19:14,697 | INFO     | stage-out finished correctly
[2025-07-27 19:20:16] 2025-07-27 23:19:15,218 | INFO     | PID=1995773 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 19:20:16] 2025-07-27 23:19:15,218 | INFO     | .. there are 14 such processes running
[2025-07-27 19:20:16] 2025-07-27 23:19:18,229 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:20:16] 2025-07-27 23:19:20,123 | INFO     | job 6747410622 has state=finished
[2025-07-27 19:20:16] 2025-07-27 23:19:20,124 | INFO     | preparing for final server update for job 6747410622 in state='finished'
[2025-07-27 19:20:16] 2025-07-27 23:19:20,124 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:20:16] 2025-07-27 23:19:20,124 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:20:16] 2025-07-27 23:19:20,125 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:20:16] 2025-07-27 23:19:20,125 | INFO     | job 6747410622 has finished - writing final server update
[2025-07-27 19:20:16] 2025-07-27 23:19:20,125 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:20:16] 2025-07-27 23:19:20,127 | INFO     | executing command: lscpu
[2025-07-27 19:20:16] 2025-07-27 23:19:20,204 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:20:16] 2025-07-27 23:19:20,834 | WARNING  | process 2003140 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 19:20:16] 2025-07-27 23:19:20,835 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6747410622/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:20:16] 2025-07-27 23:19:21,192 | INFO     | number of running child processes to parent process 2003140: 1
[2025-07-27 19:20:16] 2025-07-27 23:19:21,192 | INFO     | maximum number of monitored processes: 6
[2025-07-27 19:20:16] 2025-07-27 23:19:23,696 | INFO     | monitor loop #332: job 0:6747410622 is in state 'finished'
[2025-07-27 19:20:16] 2025-07-27 23:19:23,696 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:20:16] 2025-07-27 23:19:26,198 | INFO     | monitor loop #333: job 0:6747410622 is in state 'finished'
[2025-07-27 19:20:16] 2025-07-27 23:19:26,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:20:16] 2025-07-27 23:19:26,202 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 19:20:16] 2025-07-27 23:19:26,207 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3284.1089479166662
[2025-07-27 19:20:16] 2025-07-27 23:19:26,222 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6747410622/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:20:16] 2025-07-27 23:19:26,222 | INFO     | extracted standard info from prmon json
[2025-07-27 19:20:16] 2025-07-27 23:19:26,222 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:20:16] 2025-07-27 23:19:26,223 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:20:16] 2025-07-27 23:19:26,223 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:20:16] 2025-07-27 23:19:26,223 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:20:16] 2025-07-27 23:19:26,225 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:20:16] 2025-07-27 23:19:26,225 | INFO     | sum of square deviations: 93240818.0
[2025-07-27 19:20:16] 2025-07-27 23:19:26,225 | INFO     | sum of deviations: 408293618.0
[2025-07-27 19:20:16] 2025-07-27 23:19:26,225 | INFO     | mean x: 1753656184.0
[2025-07-27 19:20:16] 2025-07-27 23:19:26,225 | INFO     | mean y: 2509676.8358208956
[2025-07-27 19:20:16] 2025-07-27 23:19:26,225 | INFO     | -- intersect: -7676601719.349418
[2025-07-27 19:20:16] 2025-07-27 23:19:26,225 | INFO     | intersect: -7676601719.349418
[2025-07-27 19:20:16] 2025-07-27 23:19:26,226 | INFO     | chi2: 0.00045012640591733064
[2025-07-27 19:20:16] 2025-07-27 23:19:26,226 | INFO     | -- intersect: -7676601719.349418
[2025-07-27 19:20:16] 2025-07-27 23:19:26,226 | INFO     | current memory leak: 4.38 B/s (using 67 data points, chi2=0.00)
[2025-07-27 19:20:16] 2025-07-27 23:19:26,226 | INFO     | could have reported an average CPU frequency of 3282 MHz (6 samples)
[2025-07-27 19:20:16] 2025-07-27 23:19:26,226 | INFO     | ..............................
[2025-07-27 19:20:16] 2025-07-27 23:19:26,226 | INFO     | . Timing measurements:
[2025-07-27 19:20:16] 2025-07-27 23:19:26,226 | INFO     | . get job = 0 s
[2025-07-27 19:20:16] 2025-07-27 23:19:26,226 | INFO     | . initial setup = 2 s
[2025-07-27 19:20:16] 2025-07-27 23:19:26,226 | INFO     | . payload setup = 7 s
[2025-07-27 19:20:16] 2025-07-27 23:19:26,227 | INFO     | . stage-in = 0 s
[2025-07-27 19:20:16] 2025-07-27 23:19:26,227 | INFO     | . payload execution = 4490 s
[2025-07-27 19:20:16] 2025-07-27 23:19:26,227 | INFO     | . stage-out = 0 s
[2025-07-27 19:20:16] 2025-07-27 23:19:26,227 | INFO     | . log creation = 0 s
[2025-07-27 19:20:16] 2025-07-27 23:19:26,227 | INFO     | ..............................
[2025-07-27 19:20:16] 2025-07-27 23:19:26,313 | INFO     | 
[2025-07-27 19:20:16] 2025-07-27 23:19:26,313 | INFO     | job summary report
[2025-07-27 19:20:16] 2025-07-27 23:19:26,314 | INFO     | --------------------------------------------------
[2025-07-27 19:20:16] 2025-07-27 23:19:26,314 | INFO     | PanDA job id: 6747410622
[2025-07-27 19:20:16] 2025-07-27 23:19:26,314 | INFO     | task id: 45743349
[2025-07-27 19:20:16] 2025-07-27 23:19:26,314 | INFO     | errors: (none)
[2025-07-27 19:20:16] 2025-07-27 23:19:26,314 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:20:16] 2025-07-27 23:19:26,314 | INFO     | pilot state: finished 
[2025-07-27 19:20:16] 2025-07-27 23:19:26,314 | INFO     | transexitcode: 0
[2025-07-27 19:20:16] 2025-07-27 23:19:26,314 | INFO     | exeerrorcode: 0
[2025-07-27 19:20:16] 2025-07-27 23:19:26,314 | INFO     | exeerrordiag: 
[2025-07-27 19:20:16] 2025-07-27 23:19:26,314 | INFO     | exitcode: 0
[2025-07-27 19:20:16] 2025-07-27 23:19:26,314 | INFO     | exitmsg: OK
[2025-07-27 19:20:16] 2025-07-27 23:19:26,314 | INFO     | cpuconsumptiontime: 32852 s
[2025-07-27 19:20:16] 2025-07-27 23:19:26,315 | INFO     | nevents: 400
[2025-07-27 19:20:16] 2025-07-27 23:19:26,315 | INFO     | neventsw: 0
[2025-07-27 19:20:16] 2025-07-27 23:19:26,315 | INFO     | pid: 2003140
[2025-07-27 19:20:16] 2025-07-27 23:19:26,315 | INFO     | pgrp: 2003140
[2025-07-27 19:20:16] 2025-07-27 23:19:26,315 | INFO     | corecount: 8
[2025-07-27 19:20:16] 2025-07-27 23:19:26,315 | INFO     | event service: False
[2025-07-27 19:20:16] 2025-07-27 23:19:26,315 | INFO     | sizes: {0: 2397475, 5: 2397737, 11: 2397793, 4501: 2423793, 4502: 2432791, 4505: 2432847, 4513: 2433169}
[2025-07-27 19:20:16] 2025-07-27 23:19:26,315 | INFO     | --------------------------------------------------
[2025-07-27 19:20:16] 2025-07-27 23:19:26,315 | INFO     | 
[2025-07-27 19:20:16] 2025-07-27 23:19:26,315 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-07-27 19:20:16] 2025-07-27 23:19:26,347 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,347 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,347 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,347 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,347 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,347 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,347 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,348 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,348 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,348 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,348 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,348 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,348 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,348 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,348 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,348 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,348 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,348 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:20:16] 2025-07-27 23:19:26,348 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,348 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:20:16] 2025-07-27 23:19:26,349 | INFO     | job 6747410622 has completed (purged errors)
[2025-07-27 19:20:16] 2025-07-27 23:19:26,349 | INFO     | overall cleanup function is called
[2025-07-27 19:20:16] 2025-07-27 23:19:27,359 | INFO     | --- collectZombieJob: --- 10, [2003140]
[2025-07-27 19:20:16] 2025-07-27 23:19:27,359 | INFO     | zombie collector waiting for pid 2003140
[2025-07-27 19:20:16] 2025-07-27 23:19:27,359 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:20:16] 2025-07-27 23:19:27,359 | INFO     | collected zombie processes
[2025-07-27 19:20:16] 2025-07-27 23:19:27,359 | INFO     | will attempt to kill all subprocesses of pid=2003140
[2025-07-27 19:20:16] 2025-07-27 23:19:27,722 | INFO     | process IDs to be killed: [2003140] (in reverse order)
[2025-07-27 19:20:16] 2025-07-27 23:19:27,855 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:20:16] 2025-07-27 23:19:27,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:20:16] 2025-07-27 23:19:27,870 | INFO     | did not find any defunct processes belonging to 2003140
[2025-07-27 19:20:16] 2025-07-27 23:19:27,882 | INFO     | did not find any defunct processes belonging to 2003140
[2025-07-27 19:20:16] 2025-07-27 23:19:27,882 | INFO     | ready for new job
[2025-07-27 19:20:16] 2025-07-27 23:19:27,882 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:20:16] 2025-07-27 23:19:27,884 | INFO     | ***************************************
[2025-07-27 19:20:16] 2025-07-27 23:19:27,884 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:20:16] 2025-07-27 23:19:27,884 | INFO     | ***************************************
[2025-07-27 19:20:16] 2025-07-27 23:19:27,884 | INFO     | 
[2025-07-27 19:20:16] 2025-07-27 23:19:27,889 | INFO     | architecture information:
[2025-07-27 19:20:16] 2025-07-27 23:19:27,890 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:20:16] 2025-07-27 23:19:27,913 | INFO     | cat /etc/os-release:
[2025-07-27 19:20:16] NAME="CentOS Linux"
[2025-07-27 19:20:16] VERSION="7 (Core)"
[2025-07-27 19:20:16] ID="centos"
[2025-07-27 19:20:16] ID_LIKE="rhel fedora"
[2025-07-27 19:20:16] VERSION_ID="7"
[2025-07-27 19:20:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:20:16] ANSI_COLOR="0;31"
[2025-07-27 19:20:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:20:16] HOME_URL="https://www.centos.org/"
[2025-07-27 19:20:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:20:16] 
[2025-07-27 19:20:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:20:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:20:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:20:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:20:16] 
[2025-07-27 19:20:16] 2025-07-27 23:19:27,913 | INFO     | ***************************************
[2025-07-27 19:20:16] 2025-07-27 23:19:28,416 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-07-27 19:20:16] 2025-07-27 23:19:28,444 | INFO     | sufficient remaining disk space (123962654720 B)
[2025-07-27 19:20:16] 2025-07-27 23:19:28,444 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:20:16] 2025-07-27 23:19:28,445 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:20:16] 2025-07-27 23:19:28,445 | INFO     | update_server=False
[2025-07-27 19:20:16] 2025-07-27 23:19:28,445 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:20:16] 2025-07-27 23:19:28,446 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:20:16] 2025-07-27 23:19:28,699 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 19:20:16] 2025-07-27 23:19:28,700 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 19:20:16] 2025-07-27 23:19:28,700 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:20:16] 2025-07-27 23:19:28,700 | INFO     | will abort loop
[2025-07-27 19:20:16] 2025-07-27 23:19:28,719 | INFO     | all payload control threads have been joined
[2025-07-27 19:20:16] 2025-07-27 23:19:28,825 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:20:16] 2025-07-27 23:19:29,040 | INFO     | all data control threads have been joined
[2025-07-27 19:20:16] 2025-07-27 23:19:29,295 | INFO     | all job control threads have been joined
[2025-07-27 19:20:16] 2025-07-27 23:19:29,450 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:20:16] 2025-07-27 23:19:29,570 | INFO     | [job] validate thread has finished
[2025-07-27 19:20:16] 2025-07-27 23:19:29,705 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:20:16] 2025-07-27 23:19:29,726 | INFO     | [payload] control thread has finished
[2025-07-27 19:20:16] 2025-07-27 23:19:29,886 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:20:16] 2025-07-27 23:19:29,994 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:20:16] 2025-07-27 23:19:30,048 | INFO     | [data] control thread has finished
[2025-07-27 19:20:16] 2025-07-27 23:19:30,107 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:20:16] 2025-07-27 23:19:30,300 | INFO     | [job] control thread has finished
[2025-07-27 19:20:16] 2025-07-27 23:19:30,452 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:20:16] 2025-07-27 23:19:30,606 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:20:16] 2025-07-27 23:19:30,841 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:20:16] 2025-07-27 23:19:30,863 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:20:16] 2025-07-27 23:19:30,949 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:20:16] 2025-07-27 23:19:31,326 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:20:16] 2025-07-27 23:19:32,331 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:20:16] 2025-07-27 23:19:32,836 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:20:16] 2025-07-27 23:19:33,803 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140172298008384)>', '<ExcThread(monitor, started 140171777382144)>']
[2025-07-27 19:20:16] 2025-07-27 23:19:38,827 | INFO     | all workflow threads have been joined
[2025-07-27 19:20:16] 2025-07-27 23:19:38,829 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:20:16] 2025-07-27 23:19:38,829 | INFO     | traces error code: 0
[2025-07-27 19:20:16] 2025-07-27 23:19:38,830 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:20:16] 2025-07-27 23:19:59,743 | INFO     | PID=1995773 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:20:16] 2025-07-27 23:19:59,743 | INFO     | .. there are 14 such processes running
[2025-07-27 19:20:16] 2025-07-27 23:19:59,744 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:20:16] 2025-07-27 23:19:59,744 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:20:16] 2025-07-27 23:19:59,744 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:20:16] 2025-07-27 23:19:59,744 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:20:16] 2025-07-27 23:19:59,744 | INFO     | [monitor] control thread has ended
[2025-07-27 19:20:16] 2025-07-27 23:19:59,934 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:20:16] 2025-07-27 23:19:59,942 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:20:16] 2025-07-27 23:19:59,948 [wrapper] pilotpid: 1995773
[2025-07-27 19:20:16] 2025-07-27 23:19:59,953 [wrapper] Pilot exit status: 0
[2025-07-27 19:20:16] 2025-07-27 23:19:59,975 [wrapper] pandaids: 6747410622
[2025-07-27 19:20:16] 2025-07-27 23:20:00,069 [wrapper] cleanup supervisor_pilot 2253951 1995774
[2025-07-27 19:20:16] 2025-07-27 23:20:00,076 [wrapper] Test setup, not cleaning
[2025-07-27 19:20:16] 2025-07-27 23:20:00,081 [wrapper] apfmon messages muted
[2025-07-27 19:20:16] 2025-07-27 23:20:00,086 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:20:16] 2025-07-27 23:20:00,091 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:20:16]  *** Error codes and diagnostics ***
[2025-07-27 19:20:16]     "exeErrorCode": 0,
[2025-07-27 19:20:16]     "exeErrorDiag": "",
[2025-07-27 19:20:16]     "pilotErrorCode": 0,
[2025-07-27 19:20:16]     "pilotErrorDiag": "",
[2025-07-27 19:20:16]  *** Listing of results directory ***
[2025-07-27 19:20:16] total 424012
[2025-07-27 19:20:16] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 07:42 pilot3.tar.gz
[2025-07-27 19:20:16] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 07:51 queuedata.json
[2025-07-27 19:20:16] -rwx------. 1 boincer umatlas     36292 Jul 27 07:52 runpilot2-wrapper.sh
[2025-07-27 19:20:16] -rw-r--r--. 1 boincer umatlas       100 Jul 27 18:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:20:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 18:03 run_atlas
[2025-07-27 19:20:16] -rw-r--r--. 1 boincer umatlas       105 Jul 27 18:03 job.xml
[2025-07-27 19:20:16] -rw-r--r--. 2 boincer umatlas 229306288 Jul 27 18:03 EVNT.45743347._002657.pool.root.1
[2025-07-27 19:20:16] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:03 start_atlas.sh
[2025-07-27 19:20:16] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 18:03 shared
[2025-07-27 19:20:16] -rw-r--r--. 2 boincer umatlas    542902 Jul 27 18:03 input.tar.gz
[2025-07-27 19:20:16] -rw-r--r--. 1 boincer umatlas         0 Jul 27 18:03 boinc_lockfile
[2025-07-27 19:20:16] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 18:03 pandaJob.out
[2025-07-27 19:20:16] -rw-------. 1 boincer umatlas    980117 Jul 27 18:03 agis_schedconf.cvmfs.json
[2025-07-27 19:20:16] -rw-------. 1 boincer umatlas   1593052 Jul 27 18:03 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:20:16] drwx------. 4 boincer umatlas      4096 Jul 27 18:03 pilot3
[2025-07-27 19:20:16] -rw-r--r--. 1 boincer umatlas      6945 Jul 27 19:12 init_data.xml
[2025-07-27 19:20:16] -rw-------. 1 boincer umatlas 199530933 Jul 27 19:18 HITS.45743349._047903.pool.root.1
[2025-07-27 19:20:16] -rw-r--r--. 1 boincer umatlas       529 Jul 27 19:18 boinc_task_state.xml
[2025-07-27 19:20:16] -rw-------. 1 boincer umatlas      1038 Jul 27 19:19 memory_monitor_summary.json
[2025-07-27 19:20:16] -rw-------. 1 boincer umatlas    293223 Jul 27 19:19 log.45743349._047903.job.log.tgz.1
[2025-07-27 19:20:16] -rw-------. 1 boincer umatlas      7758 Jul 27 19:19 heartbeat.json
[2025-07-27 19:20:16] -rw-------. 1 boincer umatlas        95 Jul 27 19:19 pilot_heartbeat.json
[2025-07-27 19:20:16] -rw-------. 1 boincer umatlas       823 Jul 27 19:19 pilotlog.txt
[2025-07-27 19:20:16] -rw-------. 1 boincer umatlas    445880 Jul 27 19:20 log.45743349._047903.job.log.1
[2025-07-27 19:20:16] -rw-------. 1 boincer umatlas       357 Jul 27 19:20 output.list
[2025-07-27 19:20:16] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:20 runtime_log
[2025-07-27 19:20:16] -rw-------. 1 boincer umatlas    757760 Jul 27 19:20 result.tar.gz
[2025-07-27 19:20:16] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 19:20 runtime_log.err
[2025-07-27 19:20:16] -rw-------. 1 boincer umatlas       650 Jul 27 19:20 mrLKDmH6E07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmABVLDmIaTrIn.diag
[2025-07-27 19:20:16] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:20 wrapper_checkpoint.txt
[2025-07-27 19:20:16] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:20 boinc_mmap_file
[2025-07-27 19:20:16] -rw-r--r--. 1 boincer umatlas     22054 Jul 27 19:20 stderr.txt
[2025-07-27 19:20:16] HITS file was successfully produced:
[2025-07-27 19:20:16] -rw-------. 1 boincer umatlas 199530933 Jul 27 19:18 shared/HITS.pool.root.1
[2025-07-27 19:20:16]  *** Contents of shared directory: ***
[2025-07-27 19:20:16] total 420084
[2025-07-27 19:20:16] -rw-r--r--. 2 boincer umatlas 229306288 Jul 27 18:03 ATLAS.root_0
[2025-07-27 19:20:16] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:03 start_atlas.sh
[2025-07-27 19:20:16] -rw-r--r--. 2 boincer umatlas    542902 Jul 27 18:03 input.tar.gz
[2025-07-27 19:20:16] -rw-------. 1 boincer umatlas 199530933 Jul 27 19:18 HITS.pool.root.1
[2025-07-27 19:20:16] -rw-------. 1 boincer umatlas    757760 Jul 27 19:20 result.tar.gz
19:20:17 (1992181): run_atlas exited; CPU time 32969.437820
19:20:17 (1992181): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN