Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:10:33 (3677362): wrapper (7.7.26015): starting
19:10:33 (3677362): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 19:10:33] Arguments: --nthreads 12
[2025-07-27 19:10:33] Threads: 12
[2025-07-27 19:10:33] Checking for CVMFS
[2025-07-27 19:10:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 19:10:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 19:10:34] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 19:10:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 19:10:34] 2.12.6.0 1267368 19003 349588 148827 0 556 24843147 32935937 7655 16776704 0 35040206 99.695 66265008 29466 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 19:10:34] CVMFS is ok
[2025-07-27 19:10:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 19:10:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 19:10:34] Further information can be found at the LHC@home message board.
[2025-07-27 19:10:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 19:10:34] Checking for apptainer binary...
[2025-07-27 19:10:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 19:10:34] Running /usr/bin/apptainer --version
[2025-07-27 19:10:34] apptainer version 1.4.1-1.el9
[2025-07-27 19:10:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 19:10:34] c6-2-29-3.aglt2.org
[2025-07-27 19:10:34] apptainer works
[2025-07-27 19:10:34] Set ATHENA_PROC_NUMBER=12
[2025-07-27 19:10:34] Set ATHENA_CORE_NUMBER=12
[2025-07-27 19:10:34] Starting ATLAS job with PandaID=6747548387
[2025-07-27 19:10:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:23:42]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:23:42]  replicas=None
[2025-07-27 20:23:42]  scope=mc23_13p6TeV
[2025-07-27 20:23:42]  status=None
[2025-07-27 20:23:42]  status_code=0
[2025-07-27 20:23:42]  storage_token=
[2025-07-27 20:23:42]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747548387/log.45743349._052456.job.log.tgz.1
[2025-07-27 20:23:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/0b/log.45743349._052456.job.log.tgz.1
[2025-07-27 20:23:42]  workdir=None
[2025-07-27 20:23:42] ]
[2025-07-27 20:23:42] 2025-07-28 00:23:03,443 | INFO     | transferring file log.45743349._052456.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747548387/log.45743349._052456.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 20:23:42] 2025-07-28 00:23:03,444 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747548387/log.45743349._052456.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._052456.job
[2025-07-27 20:23:42] 2025-07-28 00:23:03,463 | INFO     | adding to output.list: log.45743349._052456.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/0b/log.45743349._052456.job.log.tg
[2025-07-27 20:23:42] 2025-07-28 00:23:03,466 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 20:23:42] 2025-07-28 00:23:03,466 | INFO     | summary of transferred files:
[2025-07-27 20:23:42] 2025-07-28 00:23:03,466 | INFO     |  -- lfn=log.45743349._052456.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 20:23:42] 2025-07-28 00:23:03,467 | INFO     | stage-out finished correctly
[2025-07-27 20:23:42] 2025-07-28 00:23:03,575 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 20:23:42] 2025-07-28 00:23:03,995 | INFO     | PID=3680945 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 20:23:42] 2025-07-28 00:23:03,995 | INFO     | .. there are 7 such processes running
[2025-07-27 20:23:42] 2025-07-28 00:23:05,239 | INFO     | monitor loop #324: job 0:6747548387 is in state 'finished'
[2025-07-27 20:23:42] 2025-07-28 00:23:05,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:23:42] 2025-07-28 00:23:05,672 | INFO     | job 6747548387 has state=finished
[2025-07-27 20:23:42] 2025-07-28 00:23:05,673 | INFO     | preparing for final server update for job 6747548387 in state='finished'
[2025-07-27 20:23:42] 2025-07-28 00:23:05,673 | INFO     | this job has now completed (state=finished)
[2025-07-27 20:23:42] 2025-07-28 00:23:05,673 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 20:23:42] 2025-07-28 00:23:05,673 | INFO     | log transfer has been attempted: DONE
[2025-07-27 20:23:42] 2025-07-28 00:23:05,673 | INFO     | job 6747548387 has finished - writing final server update
[2025-07-27 20:23:42] 2025-07-28 00:23:05,674 | INFO     | total number of processed events: 400 (read)
[2025-07-27 20:23:42] 2025-07-28 00:23:05,674 | INFO     | executing command: lscpu
[2025-07-27 20:23:42] 2025-07-28 00:23:05,729 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 20:23:42] 2025-07-28 00:23:07,743 | INFO     | monitor loop #325: job 0:6747548387 is in state 'finished'
[2025-07-27 20:23:42] 2025-07-28 00:23:07,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:23:42] 2025-07-28 00:23:10,246 | INFO     | monitor loop #326: job 0:6747548387 is in state 'finished'
[2025-07-27 20:23:42] 2025-07-28 00:23:10,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:23:42] 2025-07-28 00:23:10,580 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 20:23:42] 2025-07-28 00:23:10,584 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2604.8255535714293
[2025-07-27 20:23:42] 2025-07-28 00:23:10,594 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747548387/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:23:42] 2025-07-28 00:23:10,595 | INFO     | extracted standard info from prmon json
[2025-07-27 20:23:42] 2025-07-28 00:23:10,595 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:23:42] 2025-07-28 00:23:10,595 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:23:42] 2025-07-28 00:23:10,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:23:42] 2025-07-28 00:23:10,595 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:23:42] 2025-07-28 00:23:10,597 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:23:42] 2025-07-28 00:23:10,597 | INFO     | sum of square deviations: 81266640.0
[2025-07-27 20:23:42] 2025-07-28 00:23:10,598 | INFO     | sum of deviations: 1789281981.5
[2025-07-27 20:23:42] 2025-07-28 00:23:10,598 | INFO     | mean x: 1753660103.5
[2025-07-27 20:23:42] 2025-07-28 00:23:10,598 | INFO     | mean y: 2496013.328125
[2025-07-27 20:23:42] 2025-07-28 00:23:10,598 | INFO     | -- intersect: -38608580128.9607
[2025-07-27 20:23:42] 2025-07-28 00:23:10,598 | INFO     | intersect: -38608580128.9607
[2025-07-27 20:23:42] 2025-07-28 00:23:10,598 | INFO     | chi2: 0.02155431564634526
[2025-07-27 20:23:42] 2025-07-28 00:23:10,598 | INFO     | -- intersect: -38608580128.9607
[2025-07-27 20:23:42] 2025-07-28 00:23:10,598 | INFO     | current memory leak: 22.02 B/s (using 64 data points, chi2=0.02)
[2025-07-27 20:23:42] 2025-07-28 00:23:10,599 | INFO     | could have reported an average CPU frequency of 2659 MHz (6 samples)
[2025-07-27 20:23:42] 2025-07-28 00:23:10,599 | INFO     | ..............................
[2025-07-27 20:23:42] 2025-07-28 00:23:10,599 | INFO     | . Timing measurements:
[2025-07-27 20:23:42] 2025-07-28 00:23:10,599 | INFO     | . get job = 0 s
[2025-07-27 20:23:42] 2025-07-28 00:23:10,599 | INFO     | . initial setup = 2 s
[2025-07-27 20:23:42] 2025-07-28 00:23:10,599 | INFO     | . payload setup = 8 s
[2025-07-27 20:23:42] 2025-07-28 00:23:10,599 | INFO     | . stage-in = 0 s
[2025-07-27 20:23:42] 2025-07-28 00:23:10,599 | INFO     | . payload execution = 4307 s
[2025-07-27 20:23:42] 2025-07-28 00:23:10,599 | INFO     | . stage-out = 0 s
[2025-07-27 20:23:42] 2025-07-28 00:23:10,600 | INFO     | . log creation = 0 s
[2025-07-27 20:23:42] 2025-07-28 00:23:10,600 | INFO     | ..............................
[2025-07-27 20:23:42] 2025-07-28 00:23:10,686 | INFO     | 
[2025-07-27 20:23:42] 2025-07-28 00:23:10,687 | INFO     | job summary report
[2025-07-27 20:23:42] 2025-07-28 00:23:10,687 | INFO     | --------------------------------------------------
[2025-07-27 20:23:42] 2025-07-28 00:23:10,687 | INFO     | PanDA job id: 6747548387
[2025-07-27 20:23:42] 2025-07-28 00:23:10,687 | INFO     | task id: 45743349
[2025-07-27 20:23:42] 2025-07-28 00:23:10,687 | INFO     | errors: (none)
[2025-07-27 20:23:42] 2025-07-28 00:23:10,687 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:23:42] 2025-07-28 00:23:10,687 | INFO     | pilot state: finished 
[2025-07-27 20:23:42] 2025-07-28 00:23:10,687 | INFO     | transexitcode: 0
[2025-07-27 20:23:42] 2025-07-28 00:23:10,687 | INFO     | exeerrorcode: 0
[2025-07-27 20:23:42] 2025-07-28 00:23:10,687 | INFO     | exeerrordiag: 
[2025-07-27 20:23:42] 2025-07-28 00:23:10,687 | INFO     | exitcode: 0
[2025-07-27 20:23:42] 2025-07-28 00:23:10,687 | INFO     | exitmsg: OK
[2025-07-27 20:23:42] 2025-07-28 00:23:10,687 | INFO     | cpuconsumptiontime: 47010 s
[2025-07-27 20:23:42] 2025-07-28 00:23:10,687 | INFO     | nevents: 400
[2025-07-27 20:23:42] 2025-07-28 00:23:10,687 | INFO     | neventsw: 0
[2025-07-27 20:23:42] 2025-07-28 00:23:10,687 | INFO     | pid: 3688218
[2025-07-27 20:23:42] 2025-07-28 00:23:10,688 | INFO     | pgrp: 3688218
[2025-07-27 20:23:42] 2025-07-28 00:23:10,688 | INFO     | corecount: 12
[2025-07-27 20:23:42] 2025-07-28 00:23:10,688 | INFO     | event service: False
[2025-07-27 20:23:42] 2025-07-28 00:23:10,688 | INFO     | sizes: {0: 2397248, 1: 2397503, 6: 2397765, 12: 2397793, 4319: 2423808, 4320: 2432990, 4327: 2433128}
[2025-07-27 20:23:42] 2025-07-28 00:23:10,688 | INFO     | --------------------------------------------------
[2025-07-27 20:23:42] 2025-07-28 00:23:10,688 | INFO     | 
[2025-07-27 20:23:42] 2025-07-28 00:23:10,688 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 20:23:42] 2025-07-28 00:23:10,707 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,707 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:23:42] 2025-07-28 00:23:10,708 | INFO     | job 6747548387 has completed (purged errors)
[2025-07-27 20:23:42] 2025-07-28 00:23:10,709 | INFO     | overall cleanup function is called
[2025-07-27 20:23:42] 2025-07-28 00:23:11,716 | INFO     | --- collectZombieJob: --- 10, [3688218]
[2025-07-27 20:23:42] 2025-07-28 00:23:11,716 | INFO     | zombie collector waiting for pid 3688218
[2025-07-27 20:23:42] 2025-07-28 00:23:11,717 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:23:42] 2025-07-28 00:23:11,717 | INFO     | collected zombie processes
[2025-07-27 20:23:42] 2025-07-28 00:23:11,717 | INFO     | will attempt to kill all subprocesses of pid=3688218
[2025-07-27 20:23:42] 2025-07-28 00:23:11,885 | INFO     | process IDs to be killed: [3688218] (in reverse order)
[2025-07-27 20:23:42] 2025-07-28 00:23:11,959 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:23:42] 2025-07-28 00:23:11,960 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:23:42] 2025-07-28 00:23:11,970 | INFO     | did not find any defunct processes belonging to 3688218
[2025-07-27 20:23:42] 2025-07-28 00:23:11,980 | INFO     | did not find any defunct processes belonging to 3688218
[2025-07-27 20:23:42] 2025-07-28 00:23:11,980 | INFO     | ready for new job
[2025-07-27 20:23:42] 2025-07-28 00:23:11,980 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:23:42] 2025-07-28 00:23:11,982 | INFO     | ***************************************
[2025-07-27 20:23:42] 2025-07-28 00:23:11,982 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:23:42] 2025-07-28 00:23:11,982 | INFO     | ***************************************
[2025-07-27 20:23:42] 2025-07-28 00:23:11,982 | INFO     | 
[2025-07-27 20:23:42] 2025-07-28 00:23:11,996 | INFO     | architecture information:
[2025-07-27 20:23:42] 2025-07-28 00:23:11,997 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:23:42] 2025-07-28 00:23:12,012 | INFO     | cat /etc/os-release:
[2025-07-27 20:23:42] NAME="CentOS Linux"
[2025-07-27 20:23:42] VERSION="7 (Core)"
[2025-07-27 20:23:42] ID="centos"
[2025-07-27 20:23:42] ID_LIKE="rhel fedora"
[2025-07-27 20:23:42] VERSION_ID="7"
[2025-07-27 20:23:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:23:42] ANSI_COLOR="0;31"
[2025-07-27 20:23:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:23:42] HOME_URL="https://www.centos.org/"
[2025-07-27 20:23:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:23:42] 
[2025-07-27 20:23:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:23:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:23:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:23:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:23:42] 
[2025-07-27 20:23:42] 2025-07-28 00:23:12,013 | INFO     | ***************************************
[2025-07-27 20:23:42] 2025-07-28 00:23:12,515 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 20:23:42] 2025-07-28 00:23:12,533 | INFO     | sufficient remaining disk space (76363595776 B)
[2025-07-27 20:23:42] 2025-07-28 00:23:12,533 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:23:42] 2025-07-28 00:23:12,533 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:23:42] 2025-07-28 00:23:12,533 | INFO     | update_server=False
[2025-07-27 20:23:42] 2025-07-28 00:23:12,533 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:23:42] 2025-07-28 00:23:12,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:23:42] 2025-07-28 00:23:12,534 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:23:42] 2025-07-28 00:23:12,749 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 20:23:42] 2025-07-28 00:23:12,749 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 20:23:42] 2025-07-28 00:23:12,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:23:42] 2025-07-28 00:23:12,749 | INFO     | will abort loop
[2025-07-27 20:23:42] 2025-07-28 00:23:12,974 | INFO     | all data control threads have been joined
[2025-07-27 20:23:42] 2025-07-28 00:23:13,538 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:23:42] 2025-07-28 00:23:13,539 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:23:42] 2025-07-28 00:23:13,553 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:23:42] 2025-07-28 00:23:13,685 | INFO     | all payload control threads have been joined
[2025-07-27 20:23:42] 2025-07-28 00:23:13,754 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:23:42] 2025-07-28 00:23:13,825 | INFO     | all job control threads have been joined
[2025-07-27 20:23:42] 2025-07-28 00:23:13,857 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:23:42] 2025-07-28 00:23:13,979 | INFO     | [data] control thread has finished
[2025-07-27 20:23:42] 2025-07-28 00:23:14,127 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:23:42] 2025-07-28 00:23:14,161 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:23:42] 2025-07-28 00:23:14,221 | INFO     | [job] validate thread has finished
[2025-07-27 20:23:42] 2025-07-28 00:23:14,539 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:23:42] 2025-07-28 00:23:14,606 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:23:42] 2025-07-28 00:23:14,690 | INFO     | [payload] control thread has finished
[2025-07-27 20:23:42] 2025-07-28 00:23:14,830 | INFO     | [job] control thread has finished
[2025-07-27 20:23:42] 2025-07-28 00:23:14,885 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:23:42] 2025-07-28 00:23:14,940 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:23:42] 2025-07-28 00:23:18,166 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:23:42] 2025-07-28 00:23:23,459 | INFO     | job.realtimelogging is not enabled
[2025-07-27 20:23:42] 2025-07-28 00:23:24,464 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:23:42] 2025-07-28 00:23:25,289 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139953211025216)>', '<ExcThread(monitor, started 139952574686976)>']
[2025-07-27 20:23:42] 2025-07-28 00:23:30,314 | INFO     | all workflow threads have been joined
[2025-07-27 20:23:42] 2025-07-28 00:23:30,314 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:23:42] 2025-07-28 00:23:30,315 | INFO     | traces error code: 0
[2025-07-27 20:23:42] 2025-07-28 00:23:30,315 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:23:42] 2025-07-28 00:23:42,430 | INFO     | PID=3680945 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 20:23:42] 2025-07-28 00:23:42,431 | INFO     | .. there are 7 such processes running
[2025-07-27 20:23:42] 2025-07-28 00:23:42,432 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:23:42] 2025-07-28 00:23:42,432 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:23:42] 2025-07-28 00:23:42,432 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:23:42] 2025-07-28 00:23:42,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:23:42] 2025-07-28 00:23:42,432 | INFO     | [monitor] control thread has ended
[2025-07-27 20:23:42] 2025-07-28 00:23:42,613 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:23:42] 2025-07-28 00:23:42,617 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:23:42] 2025-07-28 00:23:42,622 [wrapper] pilotpid: 3680945
[2025-07-27 20:23:42] 2025-07-28 00:23:42,626 [wrapper] Pilot exit status: 0
[2025-07-27 20:23:42] 2025-07-28 00:23:42,640 [wrapper] pandaids: 6747548387
[2025-07-27 20:23:42] 2025-07-28 00:23:42,704 [wrapper] cleanup supervisor_pilot 3812547 3680946
[2025-07-27 20:23:42] 2025-07-28 00:23:42,707 [wrapper] Test setup, not cleaning
[2025-07-27 20:23:42] 2025-07-28 00:23:42,711 [wrapper] apfmon messages muted
[2025-07-27 20:23:42] 2025-07-28 00:23:42,715 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:23:42] 2025-07-28 00:23:42,720 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:23:42]  *** Error codes and diagnostics ***
[2025-07-27 20:23:42]     "exeErrorCode": 0,
[2025-07-27 20:23:42]     "exeErrorDiag": "",
[2025-07-27 20:23:42]     "pilotErrorCode": 0,
[2025-07-27 20:23:42]     "pilotErrorDiag": "",
[2025-07-27 20:23:42]  *** Listing of results directory ***
[2025-07-27 20:23:42] total 434848
[2025-07-27 20:23:42] -rw-r--r--. 1 boincer umatlas    550332 Jun 18 11:33 pilot3.tar.gz
[2025-07-27 20:23:42] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 12:49 queuedata.json
[2025-07-27 20:23:42] -rwx------. 1 boincer umatlas     36292 Jul 27 12:50 runpilot2-wrapper.sh
[2025-07-27 20:23:42] -rw-r--r--. 1 boincer umatlas       100 Jul 27 19:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:23:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 19:10 run_atlas
[2025-07-27 20:23:42] -rw-r--r--. 1 boincer umatlas       105 Jul 27 19:10 job.xml
[2025-07-27 20:23:42] -rw-r--r--. 2 boincer umatlas 229108685 Jul 27 19:10 EVNT.45743347._002805.pool.root.1
[2025-07-27 20:23:42] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 19:10 start_atlas.sh
[2025-07-27 20:23:42] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 19:10 shared
[2025-07-27 20:23:42] -rw-r--r--. 2 boincer umatlas    564560 Jul 27 19:10 input.tar.gz
[2025-07-27 20:23:42] -rw-r--r--. 1 boincer umatlas         0 Jul 27 19:10 boinc_lockfile
[2025-07-27 20:23:42] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 19:10 pandaJob.out
[2025-07-27 20:23:42] -rw-------. 1 boincer umatlas    980109 Jul 27 19:10 agis_schedconf.cvmfs.json
[2025-07-27 20:23:42] -rw-------. 1 boincer umatlas   1593052 Jul 27 19:10 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:23:42] drwx------. 6 boincer umatlas      4096 Jul 27 19:10 pilot3
[2025-07-27 20:23:42] -rw-r--r--. 1 boincer umatlas      6842 Jul 27 20:18 init_data.xml
[2025-07-27 20:23:42] -rw-------. 1 boincer umatlas 210627273 Jul 27 20:22 HITS.45743349._052456.pool.root.1
[2025-07-27 20:23:42] -rw-r--r--. 1 boincer umatlas       529 Jul 27 20:22 boinc_task_state.xml
[2025-07-27 20:23:42] -rw-------. 1 boincer umatlas      1029 Jul 27 20:22 memory_monitor_summary.json
[2025-07-27 20:23:42] -rw-------. 1 boincer umatlas    376594 Jul 27 20:23 log.45743349._052456.job.log.tgz.1
[2025-07-27 20:23:42] -rw-------. 1 boincer umatlas      7815 Jul 27 20:23 heartbeat.json
[2025-07-27 20:23:42] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 20:23 boinc_mmap_file
[2025-07-27 20:23:42] -rw-r--r--. 1 boincer umatlas        27 Jul 27 20:23 wrapper_checkpoint.txt
[2025-07-27 20:23:42] -rw-------. 1 boincer umatlas        95 Jul 27 20:23 pilot_heartbeat.json
[2025-07-27 20:23:42] -rw-------. 1 boincer umatlas       822 Jul 27 20:23 pilotlog.txt
[2025-07-27 20:23:42] -rw-------. 1 boincer umatlas    441604 Jul 27 20:23 log.45743349._052456.job.log.1
[2025-07-27 20:23:42] -rw-------. 1 boincer umatlas       357 Jul 27 20:23 output.list
[2025-07-27 20:23:42] -rw-r--r--. 1 boincer umatlas       620 Jul 27 20:23 runtime_log
[2025-07-27 20:23:42] -rw-------. 1 boincer umatlas    839680 Jul 27 20:23 result.tar.gz
[2025-07-27 20:23:42] -rw-r--r--. 1 boincer umatlas      8667 Jul 27 20:23 runtime_log.err
[2025-07-27 20:23:42] -rw-------. 1 boincer umatlas       655 Jul 27 20:23 OuuNDmRlJ07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUsVLDmzpurpm.diag
[2025-07-27 20:23:42] -rw-r--r--. 1 boincer umatlas     21916 Jul 27 20:23 stderr.txt
[2025-07-27 20:23:42] HITS file was successfully produced:
[2025-07-27 20:23:42] -rw-------. 1 boincer umatlas 210627273 Jul 27 20:22 shared/HITS.pool.root.1
[2025-07-27 20:23:42]  *** Contents of shared directory: ***
[2025-07-27 20:23:42] total 430824
[2025-07-27 20:23:42] -rw-r--r--. 2 boincer umatlas 229108685 Jul 27 19:10 ATLAS.root_0
[2025-07-27 20:23:42] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 19:10 start_atlas.sh
[2025-07-27 20:23:42] -rw-r--r--. 2 boincer umatlas    564560 Jul 27 19:10 input.tar.gz
[2025-07-27 20:23:42] -rw-------. 1 boincer umatlas 210627273 Jul 27 20:22 HITS.pool.root.1
[2025-07-27 20:23:42] -rw-------. 1 boincer umatlas    839680 Jul 27 20:23 result.tar.gz
20:23:43 (3677362): run_atlas exited; CPU time 47088.424083
20:23:43 (3677362): called boinc_finish(0)

</stderr_txt>
]]>

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