Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:57:36 (3689463): wrapper (7.7.26015): starting
17:57:36 (3689463): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 17:57:36] Arguments: --nthreads 8
[2025-07-27 17:57:36] Threads: 8
[2025-07-27 17:57:36] Checking for CVMFS
[2025-07-27 17:57:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:57:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:57:36] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:57:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:57:37] 2.13.1.0 695916 14698 250096 148825 2 148 21449200 40960000 15253 16776704 0 48946121 99.747 53924444 36478 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 17:57:37] CVMFS is ok
[2025-07-27 17:57:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:57:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:57:37] Further information can be found at the LHC@home message board.
[2025-07-27 17:57:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:57:37] Checking for apptainer binary...
[2025-07-27 17:57:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:57:37] Running /usr/bin/apptainer --version
[2025-07-27 17:57:37] apptainer version 1.4.1-1.el9
[2025-07-27 17:57:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:57:37] c-212-12.aglt2.org
[2025-07-27 17:57:37] apptainer works
[2025-07-27 17:57:37] Set ATHENA_PROC_NUMBER=8
[2025-07-27 17:57:37] Set ATHENA_CORE_NUMBER=8
[2025-07-27 17:57:37] Starting ATLAS job with PandaID=6746585266
[2025-07-27 17:57:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:36:08]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:36:08]  mtime=0
[2025-07-27 19:36:08]  protocol_id=None
[2025-07-27 19:36:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 19:36:08]  replicas=None
[2025-07-27 19:36:08]  scope=mc23_13p6TeV
[2025-07-27 19:36:08]  status=None
[2025-07-27 19:36:08]  status_code=0
[2025-07-27 19:36:08]  storage_token=
[2025-07-27 19:36:08]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6746585266/log.45743349._046252.job.log.tgz.1
[2025-07-27 19:36:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/2f/log.45743349._046252.job.log.tgz.1
[2025-07-27 19:36:08]  workdir=None
[2025-07-27 19:36:08] ]
[2025-07-27 19:36:08] 2025-07-27 23:35:26,618 | INFO     | transferring file log.45743349._046252.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6746585266/log.45743349._046252.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 19:36:08] 2025-07-27 23:35:26,618 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6746585266/log.45743349._046252.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._046252.job
[2025-07-27 19:36:08] 2025-07-27 23:35:26,638 | INFO     | adding to output.list: log.45743349._046252.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/2f/log.45743349._046252.job.log.tg
[2025-07-27 19:36:08] 2025-07-27 23:35:26,639 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 19:36:08] 2025-07-27 23:35:26,639 | INFO     | summary of transferred files:
[2025-07-27 19:36:08] 2025-07-27 23:35:26,639 | INFO     |  -- lfn=log.45743349._046252.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:36:08] 2025-07-27 23:35:26,639 | INFO     | stage-out finished correctly
[2025-07-27 19:36:08] 2025-07-27 23:35:27,731 | INFO     | monitor loop #421: job 0:6746585266 is in state 'finished'
[2025-07-27 19:36:08] 2025-07-27 23:35:27,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:36:08] 2025-07-27 23:35:29,386 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:36:08] 2025-07-27 23:35:29,922 | INFO     | job 6746585266 has state=finished
[2025-07-27 19:36:08] 2025-07-27 23:35:29,922 | INFO     | preparing for final server update for job 6746585266 in state='finished'
[2025-07-27 19:36:08] 2025-07-27 23:35:29,923 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:36:08] 2025-07-27 23:35:29,923 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:36:08] 2025-07-27 23:35:29,923 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:36:08] 2025-07-27 23:35:29,924 | INFO     | job 6746585266 has finished - writing final server update
[2025-07-27 19:36:08] 2025-07-27 23:35:29,924 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:36:08] 2025-07-27 23:35:29,935 | INFO     | executing command: lscpu
[2025-07-27 19:36:08] 2025-07-27 23:35:30,028 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:36:08] 2025-07-27 23:35:30,238 | INFO     | monitor loop #422: job 0:6746585266 is in state 'finished'
[2025-07-27 19:36:08] 2025-07-27 23:35:30,238 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:36:08] 2025-07-27 23:35:32,742 | INFO     | monitor loop #423: job 0:6746585266 is in state 'finished'
[2025-07-27 19:36:08] 2025-07-27 23:35:32,742 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:36:08] 2025-07-27 23:35:35,245 | INFO     | monitor loop #424: job 0:6746585266 is in state 'finished'
[2025-07-27 19:36:08] 2025-07-27 23:35:35,245 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:36:08] 2025-07-27 23:35:35,574 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 19:36:08] 2025-07-27 23:35:35,599 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2975.695124999999
[2025-07-27 19:36:08] 2025-07-27 23:35:35,646 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6746585266/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:36:08] 2025-07-27 23:35:35,647 | INFO     | extracted standard info from prmon json
[2025-07-27 19:36:08] 2025-07-27 23:35:35,647 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:36:08] 2025-07-27 23:35:35,647 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:36:08] 2025-07-27 23:35:35,648 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:36:08] 2025-07-27 23:35:35,648 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:36:08] 2025-07-27 23:35:35,650 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:36:08] 2025-07-27 23:35:35,650 | INFO     | sum of square deviations: 218571540.0
[2025-07-27 19:36:08] 2025-07-27 23:35:35,651 | INFO     | sum of deviations: -627644189.0000001
[2025-07-27 19:36:08] 2025-07-27 23:35:35,651 | INFO     | mean x: 1753656488.0
[2025-07-27 19:36:08] 2025-07-27 23:35:35,651 | INFO     | mean y: 2545297.7078651683
[2025-07-27 19:36:08] 2025-07-27 23:35:35,651 | INFO     | -- intersect: 5038298370.570638
[2025-07-27 19:36:08] 2025-07-27 23:35:35,651 | INFO     | intersect: 5038298370.570638
[2025-07-27 19:36:08] 2025-07-27 23:35:35,651 | INFO     | chi2: 0.040286079162242264
[2025-07-27 19:36:08] 2025-07-27 23:35:35,651 | INFO     | -- intersect: 5038298370.570638
[2025-07-27 19:36:08] 2025-07-27 23:35:35,652 | INFO     | current memory leak: -2.87 B/s (using 89 data points, chi2=0.04)
[2025-07-27 19:36:08] 2025-07-27 23:35:35,652 | INFO     | could have reported an average CPU frequency of 3008 MHz (7 samples)
[2025-07-27 19:36:08] 2025-07-27 23:35:35,652 | INFO     | ..............................
[2025-07-27 19:36:08] 2025-07-27 23:35:35,652 | INFO     | . Timing measurements:
[2025-07-27 19:36:08] 2025-07-27 23:35:35,652 | INFO     | . get job = 0 s
[2025-07-27 19:36:08] 2025-07-27 23:35:35,652 | INFO     | . initial setup = 2 s
[2025-07-27 19:36:08] 2025-07-27 23:35:35,652 | INFO     | . payload setup = 7 s
[2025-07-27 19:36:08] 2025-07-27 23:35:35,653 | INFO     | . stage-in = 0 s
[2025-07-27 19:36:08] 2025-07-27 23:35:35,653 | INFO     | . payload execution = 5827 s
[2025-07-27 19:36:08] 2025-07-27 23:35:35,653 | INFO     | . stage-out = 0 s
[2025-07-27 19:36:08] 2025-07-27 23:35:35,653 | INFO     | . log creation = 0 s
[2025-07-27 19:36:08] 2025-07-27 23:35:35,653 | INFO     | ..............................
[2025-07-27 19:36:08] 2025-07-27 23:35:36,234 | INFO     | 
[2025-07-27 19:36:08] 2025-07-27 23:35:36,234 | INFO     | job summary report
[2025-07-27 19:36:08] 2025-07-27 23:35:36,234 | INFO     | --------------------------------------------------
[2025-07-27 19:36:08] 2025-07-27 23:35:36,234 | INFO     | PanDA job id: 6746585266
[2025-07-27 19:36:08] 2025-07-27 23:35:36,234 | INFO     | task id: 45743349
[2025-07-27 19:36:08] 2025-07-27 23:35:36,234 | INFO     | errors: (none)
[2025-07-27 19:36:08] 2025-07-27 23:35:36,234 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:36:08] 2025-07-27 23:35:36,235 | INFO     | pilot state: finished 
[2025-07-27 19:36:08] 2025-07-27 23:35:36,235 | INFO     | transexitcode: 0
[2025-07-27 19:36:08] 2025-07-27 23:35:36,235 | INFO     | exeerrorcode: 0
[2025-07-27 19:36:08] 2025-07-27 23:35:36,235 | INFO     | exeerrordiag: 
[2025-07-27 19:36:08] 2025-07-27 23:35:36,235 | INFO     | exitcode: 0
[2025-07-27 19:36:08] 2025-07-27 23:35:36,235 | INFO     | exitmsg: OK
[2025-07-27 19:36:08] 2025-07-27 23:35:36,235 | INFO     | cpuconsumptiontime: 39564 s
[2025-07-27 19:36:08] 2025-07-27 23:35:36,235 | INFO     | nevents: 400
[2025-07-27 19:36:08] 2025-07-27 23:35:36,235 | INFO     | neventsw: 0
[2025-07-27 19:36:08] 2025-07-27 23:35:36,235 | INFO     | pid: 3700941
[2025-07-27 19:36:08] 2025-07-27 23:35:36,235 | INFO     | pgrp: 3700941
[2025-07-27 19:36:08] 2025-07-27 23:35:36,235 | INFO     | corecount: 8
[2025-07-27 19:36:08] 2025-07-27 23:35:36,235 | INFO     | event service: False
[2025-07-27 19:36:08] 2025-07-27 23:35:36,235 | INFO     | sizes: {0: 2397423, 5: 2397685, 11: 2397741, 5839: 2424559, 5841: 2433557, 5843: 2433613, 5850: 2433935}
[2025-07-27 19:36:08] 2025-07-27 23:35:36,235 | INFO     | --------------------------------------------------
[2025-07-27 19:36:08] 2025-07-27 23:35:36,235 | INFO     | 
[2025-07-27 19:36:08] 2025-07-27 23:35:36,236 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 19:36:08] 2025-07-27 23:35:36,264 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,264 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,264 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,264 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,264 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,264 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,264 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,265 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,265 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,265 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,265 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,265 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,265 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,265 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,265 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,265 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,265 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,265 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:36:08] 2025-07-27 23:35:36,265 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,265 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:36:08] 2025-07-27 23:35:36,266 | INFO     | job 6746585266 has completed (purged errors)
[2025-07-27 19:36:08] 2025-07-27 23:35:36,266 | INFO     | overall cleanup function is called
[2025-07-27 19:36:08] 2025-07-27 23:35:37,275 | INFO     | --- collectZombieJob: --- 10, [3700941]
[2025-07-27 19:36:08] 2025-07-27 23:35:37,275 | INFO     | zombie collector waiting for pid 3700941
[2025-07-27 19:36:08] 2025-07-27 23:35:37,275 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:36:08] 2025-07-27 23:35:37,275 | INFO     | collected zombie processes
[2025-07-27 19:36:08] 2025-07-27 23:35:37,275 | INFO     | will attempt to kill all subprocesses of pid=3700941
[2025-07-27 19:36:08] 2025-07-27 23:35:37,689 | INFO     | process IDs to be killed: [3700941] (in reverse order)
[2025-07-27 19:36:08] 2025-07-27 23:35:37,820 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:36:08] 2025-07-27 23:35:37,821 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:36:08] 2025-07-27 23:35:37,837 | INFO     | did not find any defunct processes belonging to 3700941
[2025-07-27 19:36:08] 2025-07-27 23:35:37,854 | INFO     | did not find any defunct processes belonging to 3700941
[2025-07-27 19:36:08] 2025-07-27 23:35:37,854 | INFO     | ready for new job
[2025-07-27 19:36:08] 2025-07-27 23:35:37,854 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:36:08] 2025-07-27 23:35:37,857 | INFO     | ***************************************
[2025-07-27 19:36:08] 2025-07-27 23:35:37,857 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:36:08] 2025-07-27 23:35:37,857 | INFO     | ***************************************
[2025-07-27 19:36:08] 2025-07-27 23:35:37,857 | INFO     | 
[2025-07-27 19:36:08] 2025-07-27 23:35:37,887 | INFO     | architecture information:
[2025-07-27 19:36:08] 2025-07-27 23:35:37,887 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:36:08] 2025-07-27 23:35:37,906 | INFO     | cat /etc/os-release:
[2025-07-27 19:36:08] NAME="CentOS Linux"
[2025-07-27 19:36:08] VERSION="7 (Core)"
[2025-07-27 19:36:08] ID="centos"
[2025-07-27 19:36:08] ID_LIKE="rhel fedora"
[2025-07-27 19:36:08] VERSION_ID="7"
[2025-07-27 19:36:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:36:08] ANSI_COLOR="0;31"
[2025-07-27 19:36:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:36:08] HOME_URL="https://www.centos.org/"
[2025-07-27 19:36:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:36:08] 
[2025-07-27 19:36:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:36:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:36:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:36:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:36:08] 
[2025-07-27 19:36:08] 2025-07-27 23:35:37,906 | INFO     | ***************************************
[2025-07-27 19:36:08] 2025-07-27 23:35:38,413 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 19:36:08] 2025-07-27 23:35:38,430 | INFO     | sufficient remaining disk space (129159397376 B)
[2025-07-27 19:36:08] 2025-07-27 23:35:38,431 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:36:08] 2025-07-27 23:35:38,431 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:36:08] 2025-07-27 23:35:38,431 | INFO     | update_server=False
[2025-07-27 19:36:08] 2025-07-27 23:35:38,431 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:36:08] 2025-07-27 23:35:38,652 | INFO     | all job control threads have been joined
[2025-07-27 19:36:08] 2025-07-27 23:35:38,755 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:36:08] 2025-07-27 23:35:38,755 | INFO     | aborting loop
[2025-07-27 19:36:08] 2025-07-27 23:35:38,925 | INFO     | all data control threads have been joined
[2025-07-27 19:36:08] 2025-07-27 23:35:39,436 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:36:08] 2025-07-27 23:35:39,628 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:36:08] 2025-07-27 23:35:39,657 | INFO     | [job] control thread has finished
[2025-07-27 19:36:08] 2025-07-27 23:35:39,679 | INFO     | all payload control threads have been joined
[2025-07-27 19:36:08] 2025-07-27 23:35:39,733 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:36:08] 2025-07-27 23:35:39,746 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:36:08] 2025-07-27 23:35:39,760 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:36:08] 2025-07-27 23:35:39,931 | INFO     | [data] control thread has finished
[2025-07-27 19:36:08] 2025-07-27 23:35:39,984 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:36:08] 2025-07-27 23:35:40,008 | INFO     | [job] validate thread has finished
[2025-07-27 19:36:08] 2025-07-27 23:35:40,058 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:36:08] 2025-07-27 23:35:40,072 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:36:08] 2025-07-27 23:35:40,157 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:36:08] 2025-07-27 23:35:40,337 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:36:08] 2025-07-27 23:35:40,684 | INFO     | [payload] control thread has finished
[2025-07-27 19:36:08] 2025-07-27 23:35:40,763 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:36:08] 2025-07-27 23:35:40,918 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:36:08] 2025-07-27 23:35:41,753 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:36:08] 2025-07-27 23:35:41,771 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:36:08] 2025-07-27 23:35:43,996 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:36:08] 2025-07-27 23:35:44,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140328698722112)>', '<ExcThread(monitor, started 140328342361856)>']
[2025-07-27 19:36:08] 2025-07-27 23:35:49,665 | INFO     | all workflow threads have been joined
[2025-07-27 19:36:08] 2025-07-27 23:35:49,665 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:36:08] 2025-07-27 23:35:49,665 | INFO     | traces error code: 0
[2025-07-27 19:36:08] 2025-07-27 23:35:49,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:36:08] 2025-07-27 23:36:08,196 | INFO     | PID=3693057 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:36:08] 2025-07-27 23:36:08,197 | INFO     | .. there are 16 such processes running
[2025-07-27 19:36:08] 2025-07-27 23:36:08,197 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:36:08] 2025-07-27 23:36:08,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:36:08] 2025-07-27 23:36:08,197 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:36:08] 2025-07-27 23:36:08,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:36:08] 2025-07-27 23:36:08,197 | INFO     | [monitor] control thread has ended
[2025-07-27 19:36:08] 2025-07-27 23:36:08,431 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:36:08] 2025-07-27 23:36:08,433 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:36:08] 2025-07-27 23:36:08,435 [wrapper] pilotpid: 3693057
[2025-07-27 19:36:08] 2025-07-27 23:36:08,437 [wrapper] Pilot exit status: 0
[2025-07-27 19:36:08] 2025-07-27 23:36:08,446 [wrapper] pandaids: 6746585266
[2025-07-27 19:36:08] 2025-07-27 23:36:08,528 [wrapper] cleanup supervisor_pilot   84280 3693058
[2025-07-27 19:36:08] 2025-07-27 23:36:08,533 [wrapper] Test setup, not cleaning
[2025-07-27 19:36:08] 2025-07-27 23:36:08,535 [wrapper] apfmon messages muted
[2025-07-27 19:36:08] 2025-07-27 23:36:08,538 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:36:08] 2025-07-27 23:36:08,542 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:36:08]  *** Error codes and diagnostics ***
[2025-07-27 19:36:08]     "exeErrorCode": 0,
[2025-07-27 19:36:08]     "exeErrorDiag": "",
[2025-07-27 19:36:08]     "pilotErrorCode": 0,
[2025-07-27 19:36:08]     "pilotErrorDiag": "",
[2025-07-27 19:36:08]  *** Listing of results directory ***
[2025-07-27 19:36:08] total 358776
[2025-07-27 19:36:08] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 04:09 pilot3.tar.gz
[2025-07-27 19:36:08] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 04:19 queuedata.json
[2025-07-27 19:36:08] -rwx------. 1 boincer umatlas     36292 Jul 27 04:20 runpilot2-wrapper.sh
[2025-07-27 19:36:08] -rw-r--r--. 1 boincer umatlas       100 Jul 27 17:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:36:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 17:57 run_atlas
[2025-07-27 19:36:08] -rw-r--r--. 1 boincer umatlas       105 Jul 27 17:57 job.xml
[2025-07-27 19:36:08] -rw-r--r--. 2 boincer umatlas 146064129 Jul 27 17:57 EVNT.45743347._001050.pool.root.1
[2025-07-27 19:36:08] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:57 start_atlas.sh
[2025-07-27 19:36:08] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 17:57 shared
[2025-07-27 19:36:08] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 17:57 input.tar.gz
[2025-07-27 19:36:08] -rw-r--r--. 1 boincer umatlas         0 Jul 27 17:57 boinc_lockfile
[2025-07-27 19:36:08] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 17:57 pandaJob.out
[2025-07-27 19:36:08] -rw-------. 1 boincer umatlas    980117 Jul 27 17:57 agis_schedconf.cvmfs.json
[2025-07-27 19:36:08] -rw-------. 1 boincer umatlas   1593052 Jul 27 17:57 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:36:08] drwx------. 4 boincer umatlas      4096 Jul 27 17:57 pilot3
[2025-07-27 19:36:08] -rw-r--r--. 1 boincer umatlas      6943 Jul 27 19:30 init_data.xml
[2025-07-27 19:36:08] -rw-------. 1 boincer umatlas 215688971 Jul 27 19:34 HITS.45743349._046252.pool.root.1
[2025-07-27 19:36:08] -rw-r--r--. 1 boincer umatlas       529 Jul 27 19:34 boinc_task_state.xml
[2025-07-27 19:36:08] -rw-------. 1 boincer umatlas        95 Jul 27 19:35 pilot_heartbeat.json
[2025-07-27 19:36:08] -rw-------. 1 boincer umatlas      1044 Jul 27 19:35 memory_monitor_summary.json
[2025-07-27 19:36:08] -rw-------. 1 boincer umatlas    318336 Jul 27 19:35 log.45743349._046252.job.log.tgz.1
[2025-07-27 19:36:08] -rw-------. 1 boincer umatlas      7787 Jul 27 19:35 heartbeat.json
[2025-07-27 19:36:08] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:36 boinc_mmap_file
[2025-07-27 19:36:08] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:36 wrapper_checkpoint.txt
[2025-07-27 19:36:08] -rw-------. 1 boincer umatlas       823 Jul 27 19:36 pilotlog.txt
[2025-07-27 19:36:08] -rw-------. 1 boincer umatlas    558305 Jul 27 19:36 log.45743349._046252.job.log.1
[2025-07-27 19:36:08] -rw-------. 1 boincer umatlas       357 Jul 27 19:36 output.list
[2025-07-27 19:36:08] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:36 runtime_log
[2025-07-27 19:36:08] -rw-------. 1 boincer umatlas    890880 Jul 27 19:36 result.tar.gz
[2025-07-27 19:36:08] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 19:36 runtime_log.err
[2025-07-27 19:36:08] -rw-------. 1 boincer umatlas       656 Jul 27 19:36 FYSNDm5mB07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0kULDmI38uEo.diag
[2025-07-27 19:36:08] -rw-r--r--. 1 boincer umatlas     21760 Jul 27 19:36 stderr.txt
[2025-07-27 19:36:08] HITS file was successfully produced:
[2025-07-27 19:36:08] -rw-------. 1 boincer umatlas 215688971 Jul 27 19:34 shared/HITS.pool.root.1
[2025-07-27 19:36:08]  *** Contents of shared directory: ***
[2025-07-27 19:36:08] total 354708
[2025-07-27 19:36:08] -rw-r--r--. 2 boincer umatlas 146064129 Jul 27 17:57 ATLAS.root_0
[2025-07-27 19:36:08] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:57 start_atlas.sh
[2025-07-27 19:36:08] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 17:57 input.tar.gz
[2025-07-27 19:36:08] -rw-------. 1 boincer umatlas 215688971 Jul 27 19:34 HITS.pool.root.1
[2025-07-27 19:36:08] -rw-------. 1 boincer umatlas    890880 Jul 27 19:36 result.tar.gz
19:36:09 (3689463): run_atlas exited; CPU time 39730.611992
19:36:09 (3689463): called boinc_finish(0)

</stderr_txt>
]]>

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