Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:31:41 (1261893): wrapper (7.7.26015): starting
09:31:41 (1261893): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 09:31:41] Arguments: --nthreads 12
[2025-07-28 09:31:41] Threads: 12
[2025-07-28 09:31:41] Checking for CVMFS
[2025-07-28 09:31:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 09:31:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 09:31:42] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 09:31:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 09:31:43] 2.13.1.0 4095 5326 149016 148840 0 654 32452642 46080000 40302 130560 0 37350511 99.909 8551484 21645 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-28 09:31:43] CVMFS is ok
[2025-07-28 09:31:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 09:31:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 09:31:43] Further information can be found at the LHC@home message board.
[2025-07-28 09:31:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 09:31:43] Checking for apptainer binary...
[2025-07-28 09:31:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 09:31:43] Running /usr/bin/apptainer --version
[2025-07-28 09:31:44] apptainer version 1.4.1-1.el9
[2025-07-28 09:31:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 09:31:44] mff2104.farm.particle.cz
[2025-07-28 09:31:44] apptainer works
[2025-07-28 09:31:44] Set ATHENA_PROC_NUMBER=12
[2025-07-28 09:31:44] Set ATHENA_CORE_NUMBER=12
[2025-07-28 09:31:44] Starting ATLAS job with PandaID=6747548560
[2025-07-28 09:31:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 12:20:25]  *** The last 200 lines of the pilot log: ***
[2025-07-28 12:20:25] 2025-07-28 10:11:10,381 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 12:20:25] 2025-07-28 10:11:10,384 | INFO     | fitting pss+swap vs Time
[2025-07-28 12:20:25] 2025-07-28 10:11:10,385 | INFO     | sum of square deviations: 1088871909.2039502
[2025-07-28 12:20:25] 2025-07-28 10:11:10,386 | INFO     | sum of deviations: 84833484122.4802
[2025-07-28 12:20:25] 2025-07-28 10:11:10,386 | INFO     | mean x: 1753692779.5723684
[2025-07-28 12:20:25] 2025-07-28 10:11:10,386 | INFO     | mean y: 2530399.638157895
[2025-07-28 12:20:25] 2025-07-28 10:11:10,386 | INFO     | -- intersect: -136626826381.47713
[2025-07-28 12:20:25] 2025-07-28 10:11:10,386 | INFO     | intersect: -136626826381.47713
[2025-07-28 12:20:25] 2025-07-28 10:11:10,386 | INFO     | chi2: 6.761413505000557
[2025-07-28 12:20:25] 2025-07-28 10:11:10,387 | INFO     | sum of square deviations: 984910524.1768705
[2025-07-28 12:20:25] 2025-07-28 10:11:10,387 | INFO     | sum of deviations: 91746166692.59184
[2025-07-28 12:20:25] 2025-07-28 10:11:10,388 | INFO     | mean x: 1753692627.0748298
[2025-07-28 12:20:25] 2025-07-28 10:11:10,388 | INFO     | mean y: 2540128.673469388
[2025-07-28 12:20:25] 2025-07-28 10:11:10,388 | INFO     | -- intersect: -163357046495.3427
[2025-07-28 12:20:25] 2025-07-28 10:11:10,388 | INFO     | intersect: -163357046495.3427
[2025-07-28 12:20:25] 2025-07-28 10:11:10,388 | INFO     | chi2: 6.0858474472351585
[2025-07-28 12:20:25] 2025-07-28 10:11:10,388 | INFO     | current chi2=6.0858474472351585 (change=9.991491531552809 %)
[2025-07-28 12:20:25] 2025-07-28 10:11:10,388 | INFO     | right removable region: 146
[2025-07-28 12:20:25] 2025-07-28 10:11:10,388 | INFO     | sum of square deviations: 984903814.1768705
[2025-07-28 12:20:25] 2025-07-28 10:11:10,389 | INFO     | sum of deviations: 31056778467.102055
[2025-07-28 12:20:25] 2025-07-28 10:11:10,389 | INFO     | mean x: 1753692932.0748298
[2025-07-28 12:20:25] 2025-07-28 10:11:10,389 | INFO     | mean y: 2609190.0816326533
[2025-07-28 12:20:25] 2025-07-28 10:11:10,390 | INFO     | -- intersect: -55296245486.69588
[2025-07-28 12:20:25] 2025-07-28 10:11:10,390 | INFO     | intersect: -55296245486.69588
[2025-07-28 12:20:25] 2025-07-28 10:11:10,390 | INFO     | chi2: 2.039160916529822
[2025-07-28 12:20:25] 2025-07-28 10:11:10,390 | INFO     | current chi2=2.039160916529822 (change=69.84120383967472 %)
[2025-07-28 12:20:25] 2025-07-28 10:11:10,390 | INFO     | sum of square deviations: 887773056.6478878
[2025-07-28 12:20:25] 2025-07-28 10:11:10,391 | INFO     | sum of deviations: 4894476881.774649
[2025-07-28 12:20:25] 2025-07-28 10:11:10,391 | INFO     | mean x: 1753693084.5774648
[2025-07-28 12:20:25] 2025-07-28 10:11:10,391 | INFO     | mean y: 2650001.4295774647
[2025-07-28 12:20:25] 2025-07-28 10:11:10,391 | INFO     | -- intersect: -9665823485.029093
[2025-07-28 12:20:25] 2025-07-28 10:11:10,400 | INFO     | intersect: -9665823485.029093
[2025-07-28 12:20:25] 2025-07-28 10:11:10,400 | INFO     | chi2: 0.9320452484594055
[2025-07-28 12:20:25] 2025-07-28 10:11:10,400 | INFO     | current chi2=0.9320452484594055 (change=54.292707313872526 %)
[2025-07-28 12:20:25] 2025-07-28 10:11:10,401 | INFO     | sum of square deviations: 797247074.1167868
[2025-07-28 12:20:25] 2025-07-28 10:11:10,401 | INFO     | sum of deviations: -6073193754.496349
[2025-07-28 12:20:25] 2025-07-28 10:11:10,401 | INFO     | mean x: 1753693237.080292
[2025-07-28 12:20:25] 2025-07-28 10:11:10,402 | INFO     | mean y: 2668444.408759124
[2025-07-28 12:20:25] 2025-07-28 10:11:10,402 | INFO     | -- intersect: 13361787794.627092
[2025-07-28 12:20:25] 2025-07-28 10:11:10,402 | INFO     | intersect: 13361787794.627092
[2025-07-28 12:20:25] 2025-07-28 10:11:10,402 | INFO     | chi2: 0.7534302480011642
[2025-07-28 12:20:25] 2025-07-28 10:11:10,402 | INFO     | current chi2=0.7534302480011642 (change=19.16376922187815 %)
[2025-07-28 12:20:25] 2025-07-28 10:11:10,402 | INFO     | left removable region: 30
[2025-07-28 12:20:25] 2025-07-28 10:11:10,402 | INFO     | sum of square deviations: 483936798.3017241
[2025-07-28 12:20:25] 2025-07-28 10:11:10,403 | INFO     | sum of deviations: 1235328804.7327583
[2025-07-28 12:20:25] 2025-07-28 10:11:10,403 | INFO     | mean x: 1753693511.5775862
[2025-07-28 12:20:25] 2025-07-28 10:11:10,403 | INFO     | mean y: 2687750.974137931
[2025-07-28 12:20:25] 2025-07-28 10:11:10,403 | INFO     | -- intersect: -4473905302.348575
[2025-07-28 12:20:25] 2025-07-28 10:11:10,403 | INFO     | intersect: -4473905302.348575
[2025-07-28 12:20:25] 2025-07-28 10:11:10,403 | INFO     | chi2: 0.0015366642809764583
[2025-07-28 12:20:25] 2025-07-28 10:11:10,404 | INFO     | -- intersect: -4473905302.348575
[2025-07-28 12:20:25] 2025-07-28 10:11:10,404 | INFO     | current memory leak: 2.55 B/s (using 116 data points, chi2=0.00)
[2025-07-28 12:20:25] 2025-07-28 10:11:10,409 | INFO     | could have reported an average CPU frequency of 2751 MHz (9 samples)
[2025-07-28 12:20:25] 2025-07-28 10:11:10,409 | INFO     | ..............................
[2025-07-28 12:20:25] 2025-07-28 10:11:10,409 | INFO     | . Timing measurements:
[2025-07-28 12:20:25] 2025-07-28 10:11:10,409 | INFO     | . get job = 0 s
[2025-07-28 12:20:25] 2025-07-28 10:11:10,409 | INFO     | . initial setup = 5 s
[2025-07-28 12:20:25] 2025-07-28 10:11:10,409 | INFO     | . payload setup = 68 s
[2025-07-28 12:20:25] 2025-07-28 10:11:10,409 | INFO     | . stage-in = 0 s
[2025-07-28 12:20:25] 2025-07-28 10:11:10,409 | INFO     | . payload execution = 9280 s
[2025-07-28 12:20:25] 2025-07-28 10:11:10,410 | INFO     | . stage-out = 1 s
[2025-07-28 12:20:25] 2025-07-28 10:11:10,410 | INFO     | . log creation = 0 s
[2025-07-28 12:20:25] 2025-07-28 10:11:10,410 | INFO     | ..............................
[2025-07-28 12:20:25] 2025-07-28 10:11:10,535 | INFO     | PID=1273128 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 12:20:25] 2025-07-28 10:11:10,536 | INFO     | .. there are 58 such processes running
[2025-07-28 12:20:25] 2025-07-28 10:11:10,604 | INFO     | 
[2025-07-28 12:20:25] 2025-07-28 10:11:10,606 | INFO     | job summary report
[2025-07-28 12:20:25] 2025-07-28 10:11:10,606 | INFO     | --------------------------------------------------
[2025-07-28 12:20:25] 2025-07-28 10:11:10,606 | INFO     | PanDA job id: 6747548560
[2025-07-28 12:20:25] 2025-07-28 10:11:10,606 | INFO     | task id: 45743349
[2025-07-28 12:20:25] 2025-07-28 10:11:10,606 | INFO     | errors: (none)
[2025-07-28 12:20:25] 2025-07-28 10:11:10,606 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 12:20:25] 2025-07-28 10:11:10,606 | INFO     | pilot state: finished 
[2025-07-28 12:20:25] 2025-07-28 10:11:10,606 | INFO     | transexitcode: 0
[2025-07-28 12:20:25] 2025-07-28 10:11:10,606 | INFO     | exeerrorcode: 0
[2025-07-28 12:20:25] 2025-07-28 10:11:10,606 | INFO     | exeerrordiag: 
[2025-07-28 12:20:25] 2025-07-28 10:11:10,606 | INFO     | exitcode: 0
[2025-07-28 12:20:25] 2025-07-28 10:11:10,606 | INFO     | exitmsg: OK
[2025-07-28 12:20:25] 2025-07-28 10:11:10,607 | INFO     | cpuconsumptiontime: 47142 s
[2025-07-28 12:20:25] 2025-07-28 10:11:10,607 | INFO     | nevents: 400
[2025-07-28 12:20:25] 2025-07-28 10:11:10,607 | INFO     | neventsw: 0
[2025-07-28 12:20:25] 2025-07-28 10:11:10,607 | INFO     | pid: 1290764
[2025-07-28 12:20:25] 2025-07-28 10:11:10,607 | INFO     | pgrp: 1290764
[2025-07-28 12:20:25] 2025-07-28 10:11:10,607 | INFO     | corecount: 12
[2025-07-28 12:20:25] 2025-07-28 10:11:10,607 | INFO     | event service: False
[2025-07-28 12:20:25] 2025-07-28 10:11:10,607 | INFO     | sizes: {0: 2397254, 1: 2397453, 12: 2397453, 23: 2397481, 33: 2397509, 40: 2397827, 44: 2397983, 9353: 2426532, 9355: 2435532, 9356: 2435588, 9407: 2435846}
[2025-07-28 12:20:25] 2025-07-28 10:11:10,607 | INFO     | --------------------------------------------------
[2025-07-28 12:20:25] 2025-07-28 10:11:10,607 | INFO     | 
[2025-07-28 12:20:25] 2025-07-28 10:11:10,607 | INFO     | executing command: ls -lF /scratch/.boinc/slots/7
[2025-07-28 12:20:25] 2025-07-28 10:11:10,803 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,803 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,803 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,803 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,804 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,804 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,804 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,804 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,804 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,804 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,804 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 12:20:25] 2025-07-28 10:11:10,804 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,804 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 12:20:25] 2025-07-28 10:11:10,805 | INFO     | job 6747548560 has completed (purged errors)
[2025-07-28 12:20:25] 2025-07-28 10:11:10,805 | INFO     | overall cleanup function is called
[2025-07-28 12:20:25] 2025-07-28 10:11:11,818 | INFO     | --- collectZombieJob: --- 10, [1290764]
[2025-07-28 12:20:25] 2025-07-28 10:11:11,818 | INFO     | zombie collector waiting for pid 1290764
[2025-07-28 12:20:25] 2025-07-28 10:11:11,818 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 12:20:25] 2025-07-28 10:11:11,818 | INFO     | collected zombie processes
[2025-07-28 12:20:25] 2025-07-28 10:11:11,818 | INFO     | will attempt to kill all subprocesses of pid=1290764
[2025-07-28 12:20:25] 2025-07-28 10:11:12,594 | INFO     | process IDs to be killed: [1290764] (in reverse order)
[2025-07-28 12:20:25] 2025-07-28 10:11:13,085 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 12:20:25] 2025-07-28 10:11:13,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 12:20:25] 2025-07-28 10:11:13,108 | INFO     | did not find any defunct processes belonging to 1290764
[2025-07-28 12:20:25] 2025-07-28 10:11:13,130 | INFO     | did not find any defunct processes belonging to 1290764
[2025-07-28 12:20:25] 2025-07-28 10:11:13,130 | INFO     | ready for new job
[2025-07-28 12:20:25] 2025-07-28 10:11:13,130 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 12:20:25] 2025-07-28 10:11:13,132 | INFO     | ***************************************
[2025-07-28 12:20:25] 2025-07-28 10:11:13,132 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 12:20:25] 2025-07-28 10:11:13,132 | INFO     | ***************************************
[2025-07-28 12:20:25] 2025-07-28 10:11:13,132 | INFO     | 
[2025-07-28 12:20:25] 2025-07-28 10:11:13,138 | INFO     | architecture information:
[2025-07-28 12:20:25] 2025-07-28 10:11:13,151 | INFO     | executing command: cat /etc/os-release
[2025-07-28 12:20:25] 2025-07-28 10:11:13,276 | INFO     | cat /etc/os-release:
[2025-07-28 12:20:25] NAME="CentOS Linux"
[2025-07-28 12:20:25] VERSION="7 (Core)"
[2025-07-28 12:20:25] ID="centos"
[2025-07-28 12:20:25] ID_LIKE="rhel fedora"
[2025-07-28 12:20:25] VERSION_ID="7"
[2025-07-28 12:20:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 12:20:25] ANSI_COLOR="0;31"
[2025-07-28 12:20:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 12:20:25] HOME_URL="https://www.centos.org/"
[2025-07-28 12:20:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 12:20:25] 
[2025-07-28 12:20:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 12:20:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 12:20:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 12:20:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 12:20:25] 
[2025-07-28 12:20:25] 2025-07-28 10:11:13,276 | INFO     | ***************************************
[2025-07-28 12:20:25] 2025-07-28 10:11:13,780 | INFO     | executing command: df -mP /scratch/.boinc/slots/7
[2025-07-28 12:20:25] 2025-07-28 10:11:13,921 | INFO     | sufficient remaining disk space (1583727247360 B)
[2025-07-28 12:20:25] 2025-07-28 10:11:13,921 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 12:20:25] 2025-07-28 10:11:13,921 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 12:20:25] 2025-07-28 10:11:13,922 | INFO     | update_server=False
[2025-07-28 12:20:25] 2025-07-28 10:11:13,922 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 12:20:25] 2025-07-28 10:11:14,071 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 12:20:25] 2025-07-28 10:11:14,071 | INFO     | aborting loop
[2025-07-28 12:20:25] 2025-07-28 10:11:14,198 | INFO     | all data control threads have been joined
[2025-07-28 12:20:25] 2025-07-28 10:11:14,928 | INFO     | [job] retrieve thread has finished
[2025-07-28 12:20:25] 2025-07-28 10:11:15,030 | INFO     | all payload control threads have been joined
[2025-07-28 12:20:25] 2025-07-28 10:11:15,077 | INFO     | [job] job monitor thread has finished
[2025-07-28 12:20:25] 2025-07-28 10:11:15,160 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 12:20:25] 2025-07-28 10:11:15,205 | INFO     | [data] control thread has finished
[2025-07-28 12:20:25] 2025-07-28 10:11:15,349 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 12:20:25] 2025-07-28 10:11:15,369 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 12:20:25] 2025-07-28 10:11:15,407 | INFO     | all job control threads have been joined
[2025-07-28 12:20:25] 2025-07-28 10:11:15,532 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 12:20:25] 2025-07-28 10:11:15,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 12:20:25] 2025-07-28 10:11:15,907 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 12:20:25] 2025-07-28 10:11:16,010 | INFO     | [job] validate thread has finished
[2025-07-28 12:20:25] 2025-07-28 10:11:16,031 | INFO     | [payload] failed_post thread has finished
[2025-07-28 12:20:25] 2025-07-28 10:11:16,036 | INFO     | [payload] control thread has finished
[2025-07-28 12:20:25] 2025-07-28 10:11:16,143 | INFO     | [data] copytool_in thread has finished
[2025-07-28 12:20:25] 2025-07-28 10:11:16,259 | INFO     | [payload] validate_post thread has finished
[2025-07-28 12:20:25] 2025-07-28 10:11:16,414 | INFO     | [job] control thread has finished
[2025-07-28 12:20:25] 2025-07-28 10:11:16,625 | INFO     | [job] queue monitor thread has finished
[2025-07-28 12:20:25] 2025-07-28 10:11:17,167 | INFO     | [data] copytool_out thread has finished
[2025-07-28 12:20:25] 2025-07-28 10:11:19,917 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 12:20:25] 2025-07-28 10:11:24,718 | INFO     | job.realtimelogging is not enabled
[2025-07-28 12:20:25] 2025-07-28 10:11:25,724 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 12:20:25] 2025-07-28 10:11:27,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140064978085696)>', '<ExcThread(monitor, started 140064176727808)>']
[2025-07-28 12:20:25] 2025-07-28 10:11:32,087 | INFO     | all workflow threads have been joined
[2025-07-28 12:20:25] 2025-07-28 10:11:32,088 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 12:20:25] 2025-07-28 10:11:32,092 | INFO     | traces error code: 0
[2025-07-28 12:20:25] 2025-07-28 10:11:32,092 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 12:20:25] 2025-07-28 10:11:43,495 | INFO     | PID=1273128 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 12:20:25] 2025-07-28 10:11:43,498 | INFO     | .. there are 58 such processes running
[2025-07-28 12:20:25] 2025-07-28 10:11:43,499 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 12:20:25] 2025-07-28 10:11:43,499 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 12:20:25] 2025-07-28 10:11:43,499 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 12:20:25] 2025-07-28 10:11:43,499 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 12:20:25] 2025-07-28 10:11:43,499 | INFO     | [monitor] control thread has ended
[2025-07-28 12:20:25] 2025-07-28 10:11:43,888 [wrapper] ==== pilot stdout END ====
[2025-07-28 12:20:25] 2025-07-28 10:11:43,941 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 12:20:25] 2025-07-28 10:11:43,977 [wrapper] pilotpid: 1273128
[2025-07-28 12:20:25] 2025-07-28 10:11:44,026 [wrapper] Pilot exit status: 0
[2025-07-28 12:20:25] 2025-07-28 10:11:44,217 [wrapper] pandaids: 6747548560
[2025-07-28 12:20:25] 2025-07-28 10:11:44,568 [wrapper] cleanup supervisor_pilot 1749624 1273129
[2025-07-28 12:20:25] 2025-07-28 10:11:44,594 [wrapper] Test setup, not cleaning
[2025-07-28 12:20:25] 2025-07-28 10:11:44,603 [wrapper] apfmon messages muted
[2025-07-28 12:20:25] 2025-07-28 10:11:44,646 [wrapper] ==== wrapper stdout END ====
[2025-07-28 12:20:25] 2025-07-28 10:11:44,683 [wrapper] ==== wrapper stderr END ====
[2025-07-28 12:20:25]  *** Error codes and diagnostics ***
[2025-07-28 12:20:25]     "exeErrorCode": 0,
[2025-07-28 12:20:25]     "exeErrorDiag": "",
[2025-07-28 12:20:25]     "pilotErrorCode": 0,
[2025-07-28 12:20:25]     "pilotErrorDiag": "",
[2025-07-28 12:20:25]  *** Listing of results directory ***
[2025-07-28 12:20:25] total 433652
[2025-07-28 12:20:25] -rw-r--r-- 1 boinc boinc    530466 Jul 27 18:55 pilot3.tar.gz
[2025-07-28 12:20:25] -rw-r--r-- 1 boinc boinc      5112 Jul 27 19:02 queuedata.json
[2025-07-28 12:20:25] -rwx------ 1 boinc boinc     36292 Jul 27 19:02 runpilot2-wrapper.sh
[2025-07-28 12:20:25] -rw-r--r-- 1 boinc boinc       100 Jul 28 09:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 12:20:25] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 09:31 run_atlas
[2025-07-28 12:20:25] -rw-r--r-- 1 boinc boinc       105 Jul 28 09:31 job.xml
[2025-07-28 12:20:25] -rw-r--r-- 2 boinc boinc 227885079 Jul 28 09:31 EVNT.45743347._002815.pool.root.1
[2025-07-28 12:20:25] -rw-r--r-- 1 boinc boinc      6664 Jul 28 09:31 init_data.xml
[2025-07-28 12:20:25] drwxrwx--x 2 boinc boinc      4096 Jul 28 09:31 shared
[2025-07-28 12:20:25] -rw-r--r-- 2 boinc boinc    542890 Jul 28 09:31 input.tar.gz
[2025-07-28 12:20:25] -rw-r--r-- 2 boinc boinc     15095 Jul 28 09:31 start_atlas.sh
[2025-07-28 12:20:25] -rw-r--r-- 1 boinc boinc         0 Jul 28 09:31 boinc_lockfile
[2025-07-28 12:20:25] -rw-r--r-- 1 boinc boinc      2562 Jul 28 09:31 pandaJob.out
[2025-07-28 12:20:25] -rw------- 1 boinc boinc    978452 Jul 28 09:32 agis_schedconf.cvmfs.json
[2025-07-28 12:20:25] -rw------- 1 boinc boinc   1593052 Jul 28 09:32 agis_ddmendpoints.agis.ALL.json
[2025-07-28 12:20:25] drwx------ 4 boinc boinc      4096 Jul 28 09:32 pilot3
[2025-07-28 12:20:25] -rw------- 1 boinc boinc 209797122 Jul 28 12:09 HITS.45743349._052629.pool.root.1
[2025-07-28 12:20:25] -rw-r--r-- 1 boinc boinc       528 Jul 28 12:09 boinc_task_state.xml
[2025-07-28 12:20:25] -rw------- 1 boinc boinc      1050 Jul 28 12:10 memory_monitor_summary.json
[2025-07-28 12:20:25] -rw------- 1 boinc boinc    401298 Jul 28 12:10 log.45743349._052629.job.log.tgz.1
[2025-07-28 12:20:25] -rw------- 1 boinc boinc      7785 Jul 28 12:11 heartbeat.json
[2025-07-28 12:20:25] -rw------- 1 boinc boinc        95 Jul 28 12:11 pilot_heartbeat.json
[2025-07-28 12:20:25] -rw------- 1 boinc boinc       823 Jul 28 12:11 pilotlog.txt
[2025-07-28 12:20:25] -rw------- 1 boinc boinc    848197 Jul 28 12:11 log.45743349._052629.job.log.1
[2025-07-28 12:20:25] -rw------- 1 boinc boinc       357 Jul 28 12:11 output.list
[2025-07-28 12:20:25] -rw-r--r-- 1 boinc boinc       620 Jul 28 12:11 runtime_log
[2025-07-28 12:20:25] -rw------- 1 boinc boinc   1269760 Jul 28 12:11 result.tar.gz
[2025-07-28 12:20:25] -rw------- 1 boinc boinc       669 Jul 28 12:11 WTpLDmbwJ07n9Rq4apOajLDm4fhM0noT9bVof3QYDmto2KDmHWz7hn.diag
[2025-07-28 12:20:25] -rw-r--r-- 1 boinc boinc      8721 Jul 28 12:11 runtime_log.err
[2025-07-28 12:20:25] -rw-r--r-- 1 boinc boinc        26 Jul 28 12:20 wrapper_checkpoint.txt
[2025-07-28 12:20:25] -rw-r--r-- 1 boinc boinc      8192 Jul 28 12:20 boinc_mmap_file
[2025-07-28 12:20:25] -rw-r--r-- 1 boinc boinc     21155 Jul 28 12:20 stderr.txt
[2025-07-28 12:20:25] HITS file was successfully produced:
[2025-07-28 12:20:25] -rw------- 1 boinc boinc 209797122 Jul 28 12:09 shared/HITS.pool.root.1
[2025-07-28 12:20:25]  *** Contents of shared directory: ***
[2025-07-28 12:20:26] total 429228
[2025-07-28 12:20:26] -rw-r--r-- 2 boinc boinc 227885079 Jul 28 09:31 ATLAS.root_0
[2025-07-28 12:20:26] -rw-r--r-- 2 boinc boinc    542890 Jul 28 09:31 input.tar.gz
[2025-07-28 12:20:26] -rw-r--r-- 2 boinc boinc     15095 Jul 28 09:31 start_atlas.sh
[2025-07-28 12:20:26] -rw------- 1 boinc boinc 209797122 Jul 28 12:09 HITS.pool.root.1
[2025-07-28 12:20:26] -rw------- 1 boinc boinc   1269760 Jul 28 12:11 result.tar.gz
12:20:27 (1261893): run_atlas exited; CPU time 47549.621771
12:20:27 (1261893): called boinc_finish(0)

</stderr_txt>
]]>

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