Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:10:50 (817801): wrapper (7.7.26015): starting
13:10:50 (817801): wrapper: running run_atlas (--nthreads 6)
[2025-07-28 13:10:50] Arguments: --nthreads 6
[2025-07-28 13:10:50] Threads: 6
[2025-07-28 13:10:50] Checking for CVMFS
[2025-07-28 13:10:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 13:10:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 13:10:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 13:10:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 13:10:50] 2.11.5.0 2646 1296 70516 148836 2 57 29556058 52428800 929 130560 0 2241666 99.996 44975 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-07-28 13:10:50] CVMFS is ok
[2025-07-28 13:10:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 13:10:50] Checking for apptainer binary...
[2025-07-28 13:10:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 13:10:50] Running /usr/bin/apptainer --version
[2025-07-28 13:10:50] apptainer version 1.3.6-1.el9
[2025-07-28 13:10:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 13:10:50] testio002
[2025-07-28 13:10:50] apptainer works
[2025-07-28 13:10:50] Set ATHENA_PROC_NUMBER=6
[2025-07-28 13:10:50] Set ATHENA_CORE_NUMBER=6
[2025-07-28 13:10:51] Starting ATLAS job with PandaID=6747544620
[2025-07-28 13:10:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 15:02:51]  *** The last 200 lines of the pilot log: ***
[2025-07-28 15:02:51] 2025-07-28 06:02:19,788 | INFO     | intersect: -150202742281.2734
[2025-07-28 15:02:51] 2025-07-28 06:02:19,788 | INFO     | chi2: 4.028450658382013
[2025-07-28 15:02:51] 2025-07-28 06:02:19,789 | INFO     | sum of square deviations: 338804492.0
[2025-07-28 15:02:51] 2025-07-28 06:02:19,789 | INFO     | sum of deviations: 32485919599.0
[2025-07-28 15:02:51] 2025-07-28 06:02:19,789 | INFO     | mean x: 1753679004.0
[2025-07-28 15:02:51] 2025-07-28 06:02:19,789 | INFO     | mean y: 2393111.3883495145
[2025-07-28 15:02:51] 2025-07-28 06:02:19,789 | INFO     | -- intersect: -168147311132.788
[2025-07-28 15:02:51] 2025-07-28 06:02:19,789 | INFO     | intersect: -168147311132.788
[2025-07-28 15:02:51] 2025-07-28 06:02:19,789 | INFO     | chi2: 4.0197972746383375
[2025-07-28 15:02:51] 2025-07-28 06:02:19,789 | INFO     | current chi2=4.0197972746383375 (change=0.2148067452600075 %)
[2025-07-28 15:02:51] 2025-07-28 06:02:19,789 | INFO     | right removable region: 102
[2025-07-28 15:02:51] 2025-07-28 06:02:19,789 | INFO     | sum of square deviations: 338804492.0
[2025-07-28 15:02:51] 2025-07-28 06:02:19,790 | INFO     | sum of deviations: 8679088600.999998
[2025-07-28 15:02:51] 2025-07-28 06:02:19,790 | INFO     | mean x: 1753679309.0
[2025-07-28 15:02:51] 2025-07-28 06:02:19,790 | INFO     | mean y: 2468610.3786407765
[2025-07-28 15:02:51] 2025-07-28 06:02:19,790 | INFO     | -- intersect: -44921192261.719406
[2025-07-28 15:02:51] 2025-07-28 06:02:19,790 | INFO     | intersect: -44921192261.719406
[2025-07-28 15:02:51] 2025-07-28 06:02:19,790 | INFO     | chi2: 1.5732697724851332
[2025-07-28 15:02:51] 2025-07-28 06:02:19,790 | INFO     | current chi2=1.5732697724851332 (change=60.946033453044166 %)
[2025-07-28 15:02:51] 2025-07-28 06:02:19,790 | INFO     | sum of square deviations: 291817564.5
[2025-07-28 15:02:51] 2025-07-28 06:02:19,790 | INFO     | sum of deviations: -10967731192.000002
[2025-07-28 15:02:51] 2025-07-28 06:02:19,791 | INFO     | mean x: 1753679461.5
[2025-07-28 15:02:51] 2025-07-28 06:02:19,791 | INFO     | mean y: 2532407.7959183673
[2025-07-28 15:02:51] 2025-07-28 06:02:19,791 | INFO     | -- intersect: 65913180944.72906
[2025-07-28 15:02:51] 2025-07-28 06:02:19,791 | INFO     | intersect: 65913180944.72906
[2025-07-28 15:02:51] 2025-07-28 06:02:19,791 | INFO     | chi2: 0.1004902984148751
[2025-07-28 15:02:51] 2025-07-28 06:02:19,791 | INFO     | current chi2=0.1004902984148751 (change=93.61264672007644 %)
[2025-07-28 15:02:51] 2025-07-28 06:02:19,791 | INFO     | sum of square deviations: 249388862.0
[2025-07-28 15:02:51] 2025-07-28 06:02:19,791 | INFO     | sum of deviations: -12021578721.000011
[2025-07-28 15:02:51] 2025-07-28 06:02:19,791 | INFO     | mean x: 1753679614.0
[2025-07-28 15:02:51] 2025-07-28 06:02:19,791 | INFO     | mean y: 2535931.623655914
[2025-07-28 15:02:51] 2025-07-28 06:02:19,791 | INFO     | -- intersect: 84537175378.00725
[2025-07-28 15:02:51] 2025-07-28 06:02:19,791 | INFO     | intersect: 84537175378.00725
[2025-07-28 15:02:51] 2025-07-28 06:02:19,792 | INFO     | chi2: 0.04639691866106845
[2025-07-28 15:02:51] 2025-07-28 06:02:19,792 | INFO     | current chi2=0.04639691866106845 (change=53.82945479023422 %)
[2025-07-28 15:02:51] 2025-07-28 06:02:19,792 | INFO     | sum of square deviations: 211285822.0
[2025-07-28 15:02:51] 2025-07-28 06:02:19,792 | INFO     | sum of deviations: -10819402128.0
[2025-07-28 15:02:51] 2025-07-28 06:02:19,792 | INFO     | mean x: 1753679766.5
[2025-07-28 15:02:51] 2025-07-28 06:02:19,792 | INFO     | mean y: 2531111.3863636362
[2025-07-28 15:02:51] 2025-07-28 06:02:19,792 | INFO     | -- intersect: 89803949956.71071
[2025-07-28 15:02:51] 2025-07-28 06:02:19,792 | INFO     | intersect: 89803949956.71071
[2025-07-28 15:02:51] 2025-07-28 06:02:19,792 | INFO     | chi2: 0.044646304915375544
[2025-07-28 15:02:51] 2025-07-28 06:02:19,792 | INFO     | current chi2=0.044646304915375544 (change=3.7731250182392913 %)
[2025-07-28 15:02:51] 2025-07-28 06:02:19,792 | INFO     | left removable region: 40
[2025-07-28 15:02:51] 2025-07-28 06:02:19,792 | INFO     | sum of square deviations: 73882315.5
[2025-07-28 15:02:51] 2025-07-28 06:02:19,793 | INFO     | sum of deviations: -4217185224.0000005
[2025-07-28 15:02:51] 2025-07-28 06:02:19,793 | INFO     | mean x: 1753680193.5
[2025-07-28 15:02:51] 2025-07-28 06:02:19,793 | INFO     | mean y: 2501649.35483871
[2025-07-28 15:02:51] 2025-07-28 06:02:19,793 | INFO     | -- intersect: 100102155397.34358
[2025-07-28 15:02:51] 2025-07-28 06:02:19,793 | INFO     | intersect: 100102155397.34358
[2025-07-28 15:02:51] 2025-07-28 06:02:19,793 | INFO     | chi2: 0.03888021673230447
[2025-07-28 15:02:51] 2025-07-28 06:02:19,793 | INFO     | -- intersect: 100102155397.34358
[2025-07-28 15:02:51] 2025-07-28 06:02:19,793 | INFO     | current memory leak: -57.08 B/s (using 62 data points, chi2=0.04)
[2025-07-28 15:02:51] 2025-07-28 06:02:19,793 | INFO     | could have reported an average CPU frequency of 4221 MHz (7 samples)
[2025-07-28 15:02:51] 2025-07-28 06:02:19,793 | INFO     | ..............................
[2025-07-28 15:02:51] 2025-07-28 06:02:19,793 | INFO     | . Timing measurements:
[2025-07-28 15:02:51] 2025-07-28 06:02:19,794 | INFO     | . get job = 0 s
[2025-07-28 15:02:51] 2025-07-28 06:02:19,794 | INFO     | . initial setup = 6 s
[2025-07-28 15:02:51] 2025-07-28 06:02:19,794 | INFO     | . payload setup = 2 s
[2025-07-28 15:02:51] 2025-07-28 06:02:19,794 | INFO     | . stage-in = 0 s
[2025-07-28 15:02:51] 2025-07-28 06:02:19,794 | INFO     | . payload execution = 6570 s
[2025-07-28 15:02:51] 2025-07-28 06:02:19,794 | INFO     | . stage-out = 0 s
[2025-07-28 15:02:51] 2025-07-28 06:02:19,794 | INFO     | . log creation = 0 s
[2025-07-28 15:02:51] 2025-07-28 06:02:19,794 | INFO     | ..............................
[2025-07-28 15:02:51] 2025-07-28 06:02:20,202 | INFO     | 
[2025-07-28 15:02:51] 2025-07-28 06:02:20,202 | INFO     | job summary report
[2025-07-28 15:02:51] 2025-07-28 06:02:20,202 | INFO     | --------------------------------------------------
[2025-07-28 15:02:51] 2025-07-28 06:02:20,202 | INFO     | PanDA job id: 6747544620
[2025-07-28 15:02:51] 2025-07-28 06:02:20,202 | INFO     | task id: 45758484
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | errors: (none)
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | pilot state: finished 
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | transexitcode: 0
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | exeerrorcode: 0
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | exeerrordiag: 
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | exitcode: 0
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | exitmsg: OK
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | cpuconsumptiontime: 34849 s
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | nevents: 400
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | neventsw: 0
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | pid: 828143
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | pgrp: 828143
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | corecount: 6
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | event service: False
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | sizes: {0: 2397297, 1: 2397496, 2: 2397758, 11: 2397786, 6576: 2424941, 6577: 2424940, 6578: 2434178, 6652: 2434316}
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | --------------------------------------------------
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | 
[2025-07-28 15:02:51] 2025-07-28 06:02:20,203 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-07-28 15:02:51] 2025-07-28 06:02:20,211 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,211 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,211 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | job 6747544620 has completed (purged errors)
[2025-07-28 15:02:51] 2025-07-28 06:02:20,212 | INFO     | overall cleanup function is called
[2025-07-28 15:02:51] 2025-07-28 06:02:21,218 | INFO     | --- collectZombieJob: --- 10, [828143]
[2025-07-28 15:02:51] 2025-07-28 06:02:21,219 | INFO     | zombie collector waiting for pid 828143
[2025-07-28 15:02:51] 2025-07-28 06:02:21,219 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 15:02:51] 2025-07-28 06:02:21,219 | INFO     | collected zombie processes
[2025-07-28 15:02:51] 2025-07-28 06:02:21,219 | INFO     | will attempt to kill all subprocesses of pid=828143
[2025-07-28 15:02:51] 2025-07-28 06:02:21,271 | INFO     | process IDs to be killed: [828143] (in reverse order)
[2025-07-28 15:02:51] 2025-07-28 06:02:21,290 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 15:02:51] 2025-07-28 06:02:21,290 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 15:02:51] 2025-07-28 06:02:21,292 | INFO     | did not find any defunct processes belonging to 828143
[2025-07-28 15:02:51] 2025-07-28 06:02:21,293 | INFO     | did not find any defunct processes belonging to 828143
[2025-07-28 15:02:51] 2025-07-28 06:02:21,293 | INFO     | ready for new job
[2025-07-28 15:02:51] 2025-07-28 06:02:21,293 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 15:02:51] 2025-07-28 06:02:21,294 | INFO     | ***************************************
[2025-07-28 15:02:51] 2025-07-28 06:02:21,294 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 15:02:51] 2025-07-28 06:02:21,294 | INFO     | ***************************************
[2025-07-28 15:02:51] 2025-07-28 06:02:21,294 | INFO     | 
[2025-07-28 15:02:51] 2025-07-28 06:02:21,295 | INFO     | architecture information:
[2025-07-28 15:02:51] 2025-07-28 06:02:21,295 | INFO     | executing command: cat /etc/os-release
[2025-07-28 15:02:51] 2025-07-28 06:02:21,301 | INFO     | cat /etc/os-release:
[2025-07-28 15:02:51] NAME="CentOS Linux"
[2025-07-28 15:02:51] VERSION="7 (Core)"
[2025-07-28 15:02:51] ID="centos"
[2025-07-28 15:02:51] ID_LIKE="rhel fedora"
[2025-07-28 15:02:51] VERSION_ID="7"
[2025-07-28 15:02:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 15:02:51] ANSI_COLOR="0;31"
[2025-07-28 15:02:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 15:02:51] HOME_URL="https://www.centos.org/"
[2025-07-28 15:02:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 15:02:51] 
[2025-07-28 15:02:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 15:02:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 15:02:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 15:02:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 15:02:51] 
[2025-07-28 15:02:51] 2025-07-28 06:02:21,301 | INFO     | ***************************************
[2025-07-28 15:02:51] 2025-07-28 06:02:21,804 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-07-28 15:02:51] 2025-07-28 06:02:21,811 | INFO     | sufficient remaining disk space (315947483136 B)
[2025-07-28 15:02:51] 2025-07-28 06:02:21,811 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 15:02:51] 2025-07-28 06:02:21,811 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 15:02:51] 2025-07-28 06:02:21,811 | INFO     | update_server=False
[2025-07-28 15:02:51] 2025-07-28 06:02:21,811 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 15:02:51] 2025-07-28 06:02:21,812 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 15:02:51] 2025-07-28 06:02:21,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 15:02:51] 2025-07-28 06:02:21,981 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 15:02:51] 2025-07-28 06:02:21,981 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 15:02:51] 2025-07-28 06:02:21,981 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 15:02:51] 2025-07-28 06:02:21,981 | INFO     | will abort loop
[2025-07-28 15:02:51] 2025-07-28 06:02:22,359 | INFO     | all job control threads have been joined
[2025-07-28 15:02:51] 2025-07-28 06:02:22,702 | INFO     | all payload control threads have been joined
[2025-07-28 15:02:51] 2025-07-28 06:02:22,720 | INFO     | all data control threads have been joined
[2025-07-28 15:02:51] 2025-07-28 06:02:22,816 | INFO     | [job] queue monitor thread has finished
[2025-07-28 15:02:51] 2025-07-28 06:02:22,817 | INFO     | [job] retrieve thread has finished
[2025-07-28 15:02:51] 2025-07-28 06:02:22,841 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 15:02:51] 2025-07-28 06:02:22,986 | INFO     | [job] job monitor thread has finished
[2025-07-28 15:02:51] 2025-07-28 06:02:23,132 | INFO     | [payload] validate_post thread has finished
[2025-07-28 15:02:51] 2025-07-28 06:02:23,364 | INFO     | [job] control thread has finished
[2025-07-28 15:02:51] 2025-07-28 06:02:23,707 | INFO     | [payload] control thread has finished
[2025-07-28 15:02:51] 2025-07-28 06:02:23,725 | INFO     | [data] control thread has finished
[2025-07-28 15:02:51] 2025-07-28 06:02:23,891 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 15:02:51] 2025-07-28 06:02:23,907 | INFO     | [data] copytool_out thread has finished
[2025-07-28 15:02:51] 2025-07-28 06:02:23,933 | INFO     | [data] copytool_in thread has finished
[2025-07-28 15:02:51] 2025-07-28 06:02:24,155 | INFO     | [job] validate thread has finished
[2025-07-28 15:02:51] 2025-07-28 06:02:24,206 | INFO     | [payload] failed_post thread has finished
[2025-07-28 15:02:51] 2025-07-28 06:02:24,246 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 15:02:51] 2025-07-28 06:02:24,305 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 15:02:51] 2025-07-28 06:02:24,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 15:02:51] 2025-07-28 06:02:28,423 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 15:02:51] 2025-07-28 06:02:30,227 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139763187144512)>', '<ExcThread(monitor, started 139762832750336)>']
[2025-07-28 15:02:51] 2025-07-28 06:02:35,252 | INFO     | all workflow threads have been joined
[2025-07-28 15:02:51] 2025-07-28 06:02:35,252 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 15:02:51] 2025-07-28 06:02:35,252 | INFO     | traces error code: 0
[2025-07-28 15:02:51] 2025-07-28 06:02:35,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 15:02:51] 2025-07-28 06:02:51,829 | INFO     | PID=821540 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 15:02:51] 2025-07-28 06:02:51,829 | INFO     | .. there are 2 such processes running
[2025-07-28 15:02:51] 2025-07-28 06:02:51,829 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 15:02:51] 2025-07-28 06:02:51,829 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 15:02:51] 2025-07-28 06:02:51,830 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 15:02:51] 2025-07-28 06:02:51,830 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 15:02:51] 2025-07-28 06:02:51,830 | INFO     | [monitor] control thread has ended
[2025-07-28 15:02:51] 2025-07-28 06:02:51,882 [wrapper] ==== pilot stdout END ====
[2025-07-28 15:02:51] 2025-07-28 06:02:51,884 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 15:02:51] 2025-07-28 06:02:51,884 [wrapper] pilotpid: 821540
[2025-07-28 15:02:51] 2025-07-28 06:02:51,885 [wrapper] Pilot exit status: 0
[2025-07-28 15:02:51] 2025-07-28 06:02:51,889 [wrapper] pandaids: 6747544620
[2025-07-28 15:02:51] 2025-07-28 06:02:51,901 [wrapper] cleanup supervisor_pilot  884584 821541
[2025-07-28 15:02:51] 2025-07-28 06:02:51,902 [wrapper] Test setup, not cleaning
[2025-07-28 15:02:51] 2025-07-28 06:02:51,903 [wrapper] apfmon messages muted
[2025-07-28 15:02:51] 2025-07-28 06:02:51,904 [wrapper] ==== wrapper stdout END ====
[2025-07-28 15:02:51] 2025-07-28 06:02:51,905 [wrapper] ==== wrapper stderr END ====
[2025-07-28 15:02:51]  *** Error codes and diagnostics ***
[2025-07-28 15:02:51]     "exeErrorCode": 0,
[2025-07-28 15:02:51]     "exeErrorDiag": "",
[2025-07-28 15:02:51]     "pilotErrorCode": 0,
[2025-07-28 15:02:51]     "pilotErrorDiag": "",
[2025-07-28 15:02:51]  *** Listing of results directory ***
[2025-07-28 15:02:51] total 374708
[2025-07-28 15:02:51] -rw-r--r--. 1 boinc boinc    530466 Jul 28 01:02 pilot3.tar.gz
[2025-07-28 15:02:51] -rwx------. 1 boinc boinc     36292 Jul 28 01:46 runpilot2-wrapper.sh
[2025-07-28 15:02:51] -rw-r--r--. 1 boinc boinc      5112 Jul 28 01:46 queuedata.json
[2025-07-28 15:02:51] -rw-r--r--. 1 boinc boinc       100 Jul 28 13:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 15:02:51] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 13:10 run_atlas
[2025-07-28 15:02:51] -rw-r--r--. 1 boinc boinc       105 Jul 28 13:10 job.xml
[2025-07-28 15:02:51] -rw-r--r--. 2 boinc boinc    542878 Jul 28 13:10 input.tar.gz
[2025-07-28 15:02:51] -rw-r--r--. 2 boinc boinc 217623028 Jul 28 13:10 EVNT.45758482._000004.pool.root.1
[2025-07-28 15:02:51] -rw-r--r--. 2 boinc boinc     15095 Jul 28 13:10 start_atlas.sh
[2025-07-28 15:02:51] drwxrwx--x. 2 boinc boinc        68 Jul 28 13:10 shared
[2025-07-28 15:02:51] -rw-r--r--. 1 boinc boinc         0 Jul 28 13:10 boinc_lockfile
[2025-07-28 15:02:51] -rw-r--r--. 1 boinc boinc      2559 Jul 28 13:10 pandaJob.out
[2025-07-28 15:02:51] -rw-------. 1 boinc boinc    980125 Jul 28 13:11 agis_schedconf.cvmfs.json
[2025-07-28 15:02:51] -rw-------. 1 boinc boinc   1593052 Jul 28 13:11 agis_ddmendpoints.agis.ALL.json
[2025-07-28 15:02:51] drwx------. 4 boinc boinc      4096 Jul 28 13:11 pilot3
[2025-07-28 15:02:51] -rw-r--r--. 1 boinc boinc      9634 Jul 28 14:25 init_data.xml
[2025-07-28 15:02:51] -rw-------. 1 boinc boinc 160323638 Jul 28 15:00 HITS.45758484._000096.pool.root.1
[2025-07-28 15:02:51] -rw-r--r--. 1 boinc boinc       530 Jul 28 15:00 boinc_task_state.xml
[2025-07-28 15:02:51] -rw-------. 1 boinc boinc      1040 Jul 28 15:01 memory_monitor_summary.json
[2025-07-28 15:02:51] -rw-------. 1 boinc boinc    301445 Jul 28 15:01 log.45758484._000096.job.log.tgz.1
[2025-07-28 15:02:51] -rw-------. 1 boinc boinc      7781 Jul 28 15:02 heartbeat.json
[2025-07-28 15:02:51] -rw-r--r--. 1 boinc boinc        27 Jul 28 15:02 wrapper_checkpoint.txt
[2025-07-28 15:02:51] -rw-r--r--. 1 boinc boinc      8192 Jul 28 15:02 boinc_mmap_file
[2025-07-28 15:02:51] -rw-------. 1 boinc boinc       821 Jul 28 15:02 pilotlog.txt
[2025-07-28 15:02:51] -rw-------. 1 boinc boinc        95 Jul 28 15:02 pilot_heartbeat.json
[2025-07-28 15:02:51] -rw-------. 1 boinc boinc    644711 Jul 28 15:02 log.45758484._000096.job.log.1
[2025-07-28 15:02:51] -rw-------. 1 boinc boinc       357 Jul 28 15:02 output.list
[2025-07-28 15:02:51] -rw-r--r--. 1 boinc boinc       620 Jul 28 15:02 runtime_log
[2025-07-28 15:02:51] -rw-------. 1 boinc boinc    962560 Jul 28 15:02 result.tar.gz
[2025-07-28 15:02:51] -rw-r--r--. 1 boinc boinc      8618 Jul 28 15:02 runtime_log.err
[2025-07-28 15:02:51] -rw-------. 1 boinc boinc       642 Jul 28 15:02 RADODmWhJ07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdrVLDmfZCS3m.diag
[2025-07-28 15:02:51] -rw-r--r--. 1 boinc boinc     20608 Jul 28 15:02 stderr.txt
[2025-07-28 15:02:51] HITS file was successfully produced:
[2025-07-28 15:02:51] -rw-------. 1 boinc boinc 160323638 Jul 28 15:00 shared/HITS.pool.root.1
[2025-07-28 15:02:51]  *** Contents of shared directory: ***
[2025-07-28 15:02:51] total 370580
[2025-07-28 15:02:51] -rw-r--r--. 2 boinc boinc    542878 Jul 28 13:10 input.tar.gz
[2025-07-28 15:02:51] -rw-r--r--. 2 boinc boinc 217623028 Jul 28 13:10 ATLAS.root_0
[2025-07-28 15:02:51] -rw-r--r--. 2 boinc boinc     15095 Jul 28 13:10 start_atlas.sh
[2025-07-28 15:02:51] -rw-------. 1 boinc boinc 160323638 Jul 28 15:00 HITS.pool.root.1
[2025-07-28 15:02:51] -rw-------. 1 boinc boinc    962560 Jul 28 15:02 result.tar.gz
15:02:53 (817801): run_atlas exited; CPU time 34887.287935
15:02:53 (817801): called boinc_finish(0)

</stderr_txt>
]]>

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