Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:19:26 (3705837): wrapper (7.7.26015): starting
05:19:26 (3705837): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 05:19:26] Arguments: --nthreads 12
[2025-07-28 05:19:26] Threads: 12
[2025-07-28 05:19:26] Checking for CVMFS
[2025-07-28 05:19:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 05:19:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 05:19:27] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 05:19:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 05:19:27] 2.13.1.0 659355 9017 111172 148834 3 56 2513902 4097025 0 130560 0 7621535 99.991 325036 8111 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-28 05:19:27] CVMFS is ok
[2025-07-28 05:19:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 05:19:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 05:19:27] Further information can be found at the LHC@home message board.
[2025-07-28 05:19:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 05:19:27] Checking for apptainer binary...
[2025-07-28 05:19:27] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-28 05:19:27] apptainer is not installed, using version from CVMFS
[2025-07-28 05:19:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 05:19:27] pckelar8.cern.ch
[2025-07-28 05:19:27] apptainer works
[2025-07-28 05:19:27] Set ATHENA_PROC_NUMBER=12
[2025-07-28 05:19:27] Set ATHENA_CORE_NUMBER=12
[2025-07-28 05:19:27] Starting ATLAS job with PandaID=6747626533
[2025-07-28 05:19:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 06:34:54]  *** The last 200 lines of the pilot log: ***
[2025-07-28 06:34:54]  mtime=0
[2025-07-28 06:34:54]  protocol_id=None
[2025-07-28 06:34:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 06:34:54]  replicas=None
[2025-07-28 06:34:54]  scope=mc23_13p6TeV
[2025-07-28 06:34:54]  status=None
[2025-07-28 06:34:54]  status_code=0
[2025-07-28 06:34:54]  storage_token=
[2025-07-28 06:34:54]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6747626533/log.45743349._054594.job.log.tgz.1
[2025-07-28 06:34:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/ec/log.45743349._054594.job.log.tgz.1
[2025-07-28 06:34:54]  workdir=None
[2025-07-28 06:34:54] ]
[2025-07-28 06:34:54] 2025-07-28 04:34:14,866 | INFO     | transferring file log.45743349._054594.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6747626533/log.45743349._054594.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 06:34:54] 2025-07-28 04:34:14,866 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6747626533/log.45743349._054594.job.log.tgz.1 /var/lib/boinc/slots/0/log.45743349._054594.job
[2025-07-28 06:34:54] 2025-07-28 04:34:14,881 | INFO     | adding to output.list: log.45743349._054594.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/ec/log.45743349._054594.job.log.tg
[2025-07-28 06:34:54] 2025-07-28 04:34:14,882 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 06:34:54] 2025-07-28 04:34:14,882 | INFO     | summary of transferred files:
[2025-07-28 06:34:54] 2025-07-28 04:34:14,882 | INFO     |  -- lfn=log.45743349._054594.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 06:34:54] 2025-07-28 04:34:14,882 | INFO     | stage-out finished correctly
[2025-07-28 06:34:54] 2025-07-28 04:34:16,293 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 06:34:54] 2025-07-28 04:34:16,430 | INFO     | monitor loop #344: job 0:6747626533 is in state 'finished'
[2025-07-28 06:34:54] 2025-07-28 04:34:16,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 06:34:54] 2025-07-28 04:34:18,385 | INFO     | job 6747626533 has state=finished
[2025-07-28 06:34:54] 2025-07-28 04:34:18,385 | INFO     | preparing for final server update for job 6747626533 in state='finished'
[2025-07-28 06:34:54] 2025-07-28 04:34:18,385 | INFO     | this job has now completed (state=finished)
[2025-07-28 06:34:54] 2025-07-28 04:34:18,385 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 06:34:54] 2025-07-28 04:34:18,385 | INFO     | log transfer has been attempted: DONE
[2025-07-28 06:34:54] 2025-07-28 04:34:18,385 | INFO     | job 6747626533 has finished - writing final server update
[2025-07-28 06:34:54] 2025-07-28 04:34:18,386 | INFO     | total number of processed events: 400 (read)
[2025-07-28 06:34:54] 2025-07-28 04:34:18,387 | INFO     | executing command: lscpu
[2025-07-28 06:34:54] 2025-07-28 04:34:18,405 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 06:34:54] 2025-07-28 04:34:18,933 | INFO     | monitor loop #345: job 0:6747626533 is in state 'finished'
[2025-07-28 06:34:54] 2025-07-28 04:34:18,933 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 06:34:54] 2025-07-28 04:34:21,436 | INFO     | monitor loop #346: job 0:6747626533 is in state 'finished'
[2025-07-28 06:34:54] 2025-07-28 04:34:21,436 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 06:34:54] 2025-07-28 04:34:22,374 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-28 06:34:54] 2025-07-28 04:34:22,376 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2444.93
[2025-07-28 06:34:54] 2025-07-28 04:34:22,377 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6747626533/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 06:34:54] 2025-07-28 04:34:22,378 | INFO     | extracted standard info from prmon json
[2025-07-28 06:34:54] 2025-07-28 04:34:22,378 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 06:34:54] 2025-07-28 04:34:22,378 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 06:34:54] 2025-07-28 04:34:22,379 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 06:34:54] 2025-07-28 04:34:22,379 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 06:34:54] 2025-07-28 04:34:22,380 | INFO     | fitting pss+swap vs Time
[2025-07-28 06:34:54] 2025-07-28 04:34:22,380 | INFO     | sum of square deviations: 93240818.0
[2025-07-28 06:34:54] 2025-07-28 04:34:22,381 | INFO     | sum of deviations: -11066908041.999998
[2025-07-28 06:34:54] 2025-07-28 04:34:22,381 | INFO     | mean x: 1753675115.0
[2025-07-28 06:34:54] 2025-07-28 04:34:22,381 | INFO     | mean y: 3035736.104477612
[2025-07-28 06:34:54] 2025-07-28 04:34:22,381 | INFO     | -- intersect: 208149657028.60294
[2025-07-28 06:34:54] 2025-07-28 04:34:22,381 | INFO     | intersect: 208149657028.60294
[2025-07-28 06:34:54] 2025-07-28 04:34:22,381 | INFO     | chi2: 0.12135765209346756
[2025-07-28 06:34:54] 2025-07-28 04:34:22,381 | INFO     | -- intersect: 208149657028.60294
[2025-07-28 06:34:54] 2025-07-28 04:34:22,381 | INFO     | current memory leak: -118.69 B/s (using 67 data points, chi2=0.12)
[2025-07-28 06:34:54] 2025-07-28 04:34:22,382 | INFO     | could have reported an average CPU frequency of 2531 MHz (6 samples)
[2025-07-28 06:34:54] 2025-07-28 04:34:22,382 | INFO     | ..............................
[2025-07-28 06:34:54] 2025-07-28 04:34:22,382 | INFO     | . Timing measurements:
[2025-07-28 06:34:54] 2025-07-28 04:34:22,382 | INFO     | . get job = 0 s
[2025-07-28 06:34:54] 2025-07-28 04:34:22,382 | INFO     | . initial setup = 1 s
[2025-07-28 06:34:54] 2025-07-28 04:34:22,382 | INFO     | . payload setup = 5 s
[2025-07-28 06:34:54] 2025-07-28 04:34:22,382 | INFO     | . stage-in = 0 s
[2025-07-28 06:34:54] 2025-07-28 04:34:22,382 | INFO     | . payload execution = 4457 s
[2025-07-28 06:34:54] 2025-07-28 04:34:22,382 | INFO     | . stage-out = 0 s
[2025-07-28 06:34:54] 2025-07-28 04:34:22,382 | INFO     | . log creation = 0 s
[2025-07-28 06:34:54] 2025-07-28 04:34:22,383 | INFO     | ..............................
[2025-07-28 06:34:54] 2025-07-28 04:34:22,598 | INFO     | 
[2025-07-28 06:34:54] 2025-07-28 04:34:22,599 | INFO     | job summary report
[2025-07-28 06:34:54] 2025-07-28 04:34:22,599 | INFO     | --------------------------------------------------
[2025-07-28 06:34:54] 2025-07-28 04:34:22,599 | INFO     | PanDA job id: 6747626533
[2025-07-28 06:34:54] 2025-07-28 04:34:22,599 | INFO     | task id: 45743349
[2025-07-28 06:34:54] 2025-07-28 04:34:22,599 | INFO     | errors: (none)
[2025-07-28 06:34:54] 2025-07-28 04:34:22,599 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 06:34:54] 2025-07-28 04:34:22,599 | INFO     | pilot state: finished 
[2025-07-28 06:34:54] 2025-07-28 04:34:22,599 | INFO     | transexitcode: 0
[2025-07-28 06:34:54] 2025-07-28 04:34:22,599 | INFO     | exeerrorcode: 0
[2025-07-28 06:34:54] 2025-07-28 04:34:22,599 | INFO     | exeerrordiag: 
[2025-07-28 06:34:54] 2025-07-28 04:34:22,599 | INFO     | exitcode: 0
[2025-07-28 06:34:54] 2025-07-28 04:34:22,599 | INFO     | exitmsg: OK
[2025-07-28 06:34:54] 2025-07-28 04:34:22,600 | INFO     | cpuconsumptiontime: 49478 s
[2025-07-28 06:34:54] 2025-07-28 04:34:22,600 | INFO     | nevents: 400
[2025-07-28 06:34:54] 2025-07-28 04:34:22,600 | INFO     | neventsw: 0
[2025-07-28 06:34:54] 2025-07-28 04:34:22,600 | INFO     | pid: 3716622
[2025-07-28 06:34:54] 2025-07-28 04:34:22,600 | INFO     | pgrp: 3716622
[2025-07-28 06:34:54] 2025-07-28 04:34:22,600 | INFO     | corecount: 12
[2025-07-28 06:34:54] 2025-07-28 04:34:22,600 | INFO     | event service: False
[2025-07-28 06:34:54] 2025-07-28 04:34:22,600 | INFO     | sizes: {0: 2397475, 1: 2397475, 3: 2397765, 11: 2397793, 4466: 2424001, 4467: 2432999, 4468: 2433183, 4474: 2433377}
[2025-07-28 06:34:54] 2025-07-28 04:34:22,600 | INFO     | --------------------------------------------------
[2025-07-28 06:34:54] 2025-07-28 04:34:22,600 | INFO     | 
[2025-07-28 06:34:54] 2025-07-28 04:34:22,600 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-28 06:34:54] 2025-07-28 04:34:22,620 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,620 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,620 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,620 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,620 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,620 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,621 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,621 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,621 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,621 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,621 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,621 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,621 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,621 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,621 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,621 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 06:34:54] 2025-07-28 04:34:22,622 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,622 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 06:34:54] 2025-07-28 04:34:22,622 | INFO     | job 6747626533 has completed (purged errors)
[2025-07-28 06:34:54] 2025-07-28 04:34:22,622 | INFO     | overall cleanup function is called
[2025-07-28 06:34:54] 2025-07-28 04:34:23,629 | INFO     | --- collectZombieJob: --- 10, [3716622]
[2025-07-28 06:34:54] 2025-07-28 04:34:23,629 | INFO     | zombie collector waiting for pid 3716622
[2025-07-28 06:34:54] 2025-07-28 04:34:23,629 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 06:34:54] 2025-07-28 04:34:23,629 | INFO     | collected zombie processes
[2025-07-28 06:34:54] 2025-07-28 04:34:23,630 | INFO     | will attempt to kill all subprocesses of pid=3716622
[2025-07-28 06:34:54] 2025-07-28 04:34:23,697 | INFO     | process IDs to be killed: [3716622] (in reverse order)
[2025-07-28 06:34:54] 2025-07-28 04:34:23,730 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 06:34:54] 2025-07-28 04:34:23,731 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 06:34:54] 2025-07-28 04:34:23,733 | INFO     | did not find any defunct processes belonging to 3716622
[2025-07-28 06:34:54] 2025-07-28 04:34:23,735 | INFO     | did not find any defunct processes belonging to 3716622
[2025-07-28 06:34:54] 2025-07-28 04:34:23,735 | INFO     | ready for new job
[2025-07-28 06:34:54] 2025-07-28 04:34:23,735 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 06:34:54] 2025-07-28 04:34:23,736 | INFO     | ***************************************
[2025-07-28 06:34:54] 2025-07-28 04:34:23,736 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 06:34:54] 2025-07-28 04:34:23,736 | INFO     | ***************************************
[2025-07-28 06:34:54] 2025-07-28 04:34:23,736 | INFO     | 
[2025-07-28 06:34:54] 2025-07-28 04:34:23,737 | INFO     | architecture information:
[2025-07-28 06:34:54] 2025-07-28 04:34:23,737 | INFO     | executing command: cat /etc/os-release
[2025-07-28 06:34:54] 2025-07-28 04:34:23,748 | INFO     | cat /etc/os-release:
[2025-07-28 06:34:54] NAME="CentOS Linux"
[2025-07-28 06:34:54] VERSION="7 (Core)"
[2025-07-28 06:34:54] ID="centos"
[2025-07-28 06:34:54] ID_LIKE="rhel fedora"
[2025-07-28 06:34:54] VERSION_ID="7"
[2025-07-28 06:34:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 06:34:54] ANSI_COLOR="0;31"
[2025-07-28 06:34:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 06:34:54] HOME_URL="https://www.centos.org/"
[2025-07-28 06:34:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 06:34:54] 
[2025-07-28 06:34:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 06:34:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 06:34:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 06:34:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 06:34:54] 
[2025-07-28 06:34:54] 2025-07-28 04:34:23,748 | INFO     | ***************************************
[2025-07-28 06:34:54] 2025-07-28 04:34:24,251 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-28 06:34:54] 2025-07-28 04:34:24,263 | INFO     | sufficient remaining disk space (1718375940096 B)
[2025-07-28 06:34:54] 2025-07-28 04:34:24,264 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 06:34:54] 2025-07-28 04:34:24,264 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 06:34:54] 2025-07-28 04:34:24,264 | INFO     | update_server=False
[2025-07-28 06:34:54] 2025-07-28 04:34:24,264 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 06:34:54] 2025-07-28 04:34:24,264 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 06:34:54] 2025-07-28 04:34:24,267 | INFO     | all payload control threads have been joined
[2025-07-28 06:34:54] 2025-07-28 04:34:24,578 | INFO     | all data control threads have been joined
[2025-07-28 06:34:54] 2025-07-28 04:34:24,949 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 06:34:54] 2025-07-28 04:34:24,950 | INFO     | aborting loop
[2025-07-28 06:34:54] 2025-07-28 04:34:25,189 | INFO     | all job control threads have been joined
[2025-07-28 06:34:54] 2025-07-28 04:34:25,270 | INFO     | [job] retrieve thread has finished
[2025-07-28 06:34:54] 2025-07-28 04:34:25,270 | INFO     | [job] queue monitor thread has finished
[2025-07-28 06:34:54] 2025-07-28 04:34:25,272 | INFO     | [payload] control thread has finished
[2025-07-28 06:34:54] 2025-07-28 04:34:25,360 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 06:34:54] 2025-07-28 04:34:25,440 | INFO     | [data] copytool_in thread has finished
[2025-07-28 06:34:54] 2025-07-28 04:34:25,462 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 06:34:54] 2025-07-28 04:34:25,476 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 06:34:54] 2025-07-28 04:34:25,583 | INFO     | [data] control thread has finished
[2025-07-28 06:34:54] 2025-07-28 04:34:25,758 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 06:34:54] 2025-07-28 04:34:25,955 | INFO     | [job] job monitor thread has finished
[2025-07-28 06:34:54] 2025-07-28 04:34:26,195 | INFO     | [job] control thread has finished
[2025-07-28 06:34:54] 2025-07-28 04:34:26,535 | INFO     | [payload] validate_post thread has finished
[2025-07-28 06:34:54] 2025-07-28 04:34:26,588 | INFO     | [payload] failed_post thread has finished
[2025-07-28 06:34:54] 2025-07-28 04:34:26,747 | INFO     | [job] validate thread has finished
[2025-07-28 06:34:54] 2025-07-28 04:34:26,863 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 06:34:54] 2025-07-28 04:34:27,468 | INFO     | [data] copytool_out thread has finished
[2025-07-28 06:34:54] 2025-07-28 04:34:30,866 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 06:34:54] 2025-07-28 04:34:32,217 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-07-28 06:34:54] 2025-07-28 04:34:34,673 | INFO     | job.realtimelogging is not enabled
[2025-07-28 06:34:54] 2025-07-28 04:34:35,678 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 06:34:54] 2025-07-28 04:34:35,884 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140459009353536)>', '<ExcThread(monitor, started 140458030257920)>']
[2025-07-28 06:34:54] 2025-07-28 04:34:40,909 | INFO     | all workflow threads have been joined
[2025-07-28 06:34:54] 2025-07-28 04:34:40,909 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 06:34:54] 2025-07-28 04:34:40,910 | INFO     | traces error code: 0
[2025-07-28 06:34:54] 2025-07-28 04:34:40,910 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 06:34:54] 2025-07-28 04:34:54,376 | INFO     | PID=3709515 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 06:34:54] 2025-07-28 04:34:54,376 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 06:34:54] 2025-07-28 04:34:54,376 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 06:34:54] 2025-07-28 04:34:54,376 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 06:34:54] 2025-07-28 04:34:54,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 06:34:54] 2025-07-28 04:34:54,376 | CRITICAL | thread 'MainThread' is not alive
[2025-07-28 06:34:54] 2025-07-28 04:34:54,377 | INFO     | [monitor] control thread has ended
[2025-07-28 06:34:54] 2025-07-28 04:34:54,463 [wrapper] ==== pilot stdout END ====
[2025-07-28 06:34:54] 2025-07-28 04:34:54,465 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 06:34:54] 2025-07-28 04:34:54,467 [wrapper] pilotpid: 3709515
[2025-07-28 06:34:54] 2025-07-28 04:34:54,470 [wrapper] Pilot exit status: 0
[2025-07-28 06:34:54] 2025-07-28 04:34:54,478 [wrapper] pandaids: 6747626533
[2025-07-28 06:34:54] 2025-07-28 04:34:54,496 [wrapper] cleanup supervisor_pilot 3734111 3709516
[2025-07-28 06:34:54] 2025-07-28 04:34:54,498 [wrapper] Test setup, not cleaning
[2025-07-28 06:34:54] 2025-07-28 04:34:54,500 [wrapper] apfmon messages muted
[2025-07-28 06:34:54] 2025-07-28 04:34:54,502 [wrapper] ==== wrapper stdout END ====
[2025-07-28 06:34:54] 2025-07-28 04:34:54,504 [wrapper] ==== wrapper stderr END ====
[2025-07-28 06:34:54]  *** Error codes and diagnostics ***
[2025-07-28 06:34:54]     "exeErrorCode": 0,
[2025-07-28 06:34:54]     "exeErrorDiag": "",
[2025-07-28 06:34:54]     "pilotErrorCode": 0,
[2025-07-28 06:34:54]     "pilotErrorDiag": "",
[2025-07-28 06:34:54]  *** Listing of results directory ***
[2025-07-28 06:34:54] total 339760
[2025-07-28 06:34:54] -rw-r--r-- 1 boinc boinc    530466 Jul 27 21:12 pilot3.tar.gz
[2025-07-28 06:34:54] -rw-r--r-- 1 boinc boinc      5112 Jul 27 21:27 queuedata.json
[2025-07-28 06:34:54] -rwx------ 1 boinc boinc     36292 Jul 27 21:28 runpilot2-wrapper.sh
[2025-07-28 06:34:54] -rw-r--r-- 1 boinc boinc       100 Jul 28 05:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 06:34:54] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 05:19 run_atlas
[2025-07-28 06:34:54] -rw-r--r-- 1 boinc boinc       105 Jul 28 05:19 job.xml
[2025-07-28 06:34:54] -rw-r--r-- 1 boinc boinc      6251 Jul 28 05:19 init_data.xml
[2025-07-28 06:34:54] -rw-r--r-- 2 boinc boinc 142123388 Jul 28 05:19 EVNT.45743347._002959.pool.root.1
[2025-07-28 06:34:54] -rw-r--r-- 2 boinc boinc     15095 Jul 28 05:19 start_atlas.sh
[2025-07-28 06:34:54] drwxrwx--x 2 boinc boinc      4096 Jul 28 05:19 shared
[2025-07-28 06:34:54] -rw-r--r-- 2 boinc boinc    542898 Jul 28 05:19 input.tar.gz
[2025-07-28 06:34:54] -rw-r--r-- 1 boinc boinc         0 Jul 28 05:19 boinc_lockfile
[2025-07-28 06:34:54] -rw-r--r-- 1 boinc boinc      2563 Jul 28 05:19 pandaJob.out
[2025-07-28 06:34:54] -rw------- 1 boinc boinc    980117 Jul 28 05:19 agis_schedconf.cvmfs.json
[2025-07-28 06:34:54] -rw------- 1 boinc boinc   1593052 Jul 28 05:19 agis_ddmendpoints.agis.ALL.json
[2025-07-28 06:34:54] drwx------ 4 boinc boinc      4096 Jul 28 05:19 pilot3
[2025-07-28 06:34:54] -rw------- 1 boinc boinc 200318725 Jul 28 06:33 HITS.45743349._054594.pool.root.1
[2025-07-28 06:34:54] -rw-r--r-- 1 boinc boinc       529 Jul 28 06:33 boinc_task_state.xml
[2025-07-28 06:34:54] -rw------- 1 boinc boinc        95 Jul 28 06:34 pilot_heartbeat.json
[2025-07-28 06:34:54] -rw------- 1 boinc boinc      1012 Jul 28 06:34 memory_monitor_summary.json
[2025-07-28 06:34:54] -rw------- 1 boinc boinc    360110 Jul 28 06:34 log.45743349._054594.job.log.tgz.1
[2025-07-28 06:34:54] -rw------- 1 boinc boinc      7787 Jul 28 06:34 heartbeat.json
[2025-07-28 06:34:54] -rw-r--r-- 1 boinc boinc      8192 Jul 28 06:34 boinc_mmap_file
[2025-07-28 06:34:54] -rw-r--r-- 1 boinc boinc        27 Jul 28 06:34 wrapper_checkpoint.txt
[2025-07-28 06:34:54] -rw------- 1 boinc boinc       817 Jul 28 06:34 pilotlog.txt
[2025-07-28 06:34:54] -rw------- 1 boinc boinc    440713 Jul 28 06:34 log.45743349._054594.job.log.1
[2025-07-28 06:34:54] -rw------- 1 boinc boinc       357 Jul 28 06:34 output.list
[2025-07-28 06:34:54] -rw-r--r-- 1 boinc boinc       620 Jul 28 06:34 runtime_log
[2025-07-28 06:34:54] -rw------- 1 boinc boinc    819200 Jul 28 06:34 result.tar.gz
[2025-07-28 06:34:54] -rw-r--r-- 1 boinc boinc      8684 Jul 28 06:34 runtime_log.err
[2025-07-28 06:34:54] -rw------- 1 boinc boinc       654 Jul 28 06:34 MxxKDmvDM07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUEWLDmO2BMAo.diag
[2025-07-28 06:34:54] -rw-r--r-- 1 boinc boinc     21787 Jul 28 06:34 stderr.txt
[2025-07-28 06:34:54] HITS file was successfully produced:
[2025-07-28 06:34:54] -rw------- 1 boinc boinc 200318725 Jul 28 06:33 shared/HITS.pool.root.1
[2025-07-28 06:34:54]  *** Contents of shared directory: ***
[2025-07-28 06:34:54] total 335772
[2025-07-28 06:34:54] -rw-r--r-- 2 boinc boinc 142123388 Jul 28 05:19 ATLAS.root_0
[2025-07-28 06:34:54] -rw-r--r-- 2 boinc boinc     15095 Jul 28 05:19 start_atlas.sh
[2025-07-28 06:34:54] -rw-r--r-- 2 boinc boinc    542898 Jul 28 05:19 input.tar.gz
[2025-07-28 06:34:54] -rw------- 1 boinc boinc 200318725 Jul 28 06:33 HITS.pool.root.1
[2025-07-28 06:34:54] -rw------- 1 boinc boinc    819200 Jul 28 06:34 result.tar.gz
06:34:56 (3705837): run_atlas exited; CPU time 49499.876385
06:34:56 (3705837): called boinc_finish(0)

</stderr_txt>
]]>

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