Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:54:49 (728801): wrapper (7.7.26015): starting
17:54:49 (728801): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 17:54:49] Arguments: --nthreads 8
[2025-07-27 17:54:49] Threads: 8
[2025-07-27 17:54:49] Checking for CVMFS
[2025-07-27 17:54:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:54:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:54:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:54:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:54:49] 2.12.6.0 99509 27834 247260 148825 3 737 32631668 40960000 24014 16776704 0 323051923 99.705 259301400 30037 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 17:54:49] CVMFS is ok
[2025-07-27 17:54:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:54:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:54:49] Further information can be found at the LHC@home message board.
[2025-07-27 17:54:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:54:49] Checking for apptainer binary...
[2025-07-27 17:54:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:54:49] Running /usr/bin/apptainer --version
[2025-07-27 17:54:49] apptainer version 1.4.1-1.el9
[2025-07-27 17:54:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:54:49] c8-16-2.aglt2.org
[2025-07-27 17:54:49] apptainer works
[2025-07-27 17:54:49] Set ATHENA_PROC_NUMBER=8
[2025-07-27 17:54:49] Set ATHENA_CORE_NUMBER=8
[2025-07-27 17:54:49] Starting ATLAS job with PandaID=6747548477
[2025-07-27 17:54:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 18:53:00]  *** The last 200 lines of the pilot log: ***
[2025-07-27 18:53:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 18:53:00]  replicas=None
[2025-07-27 18:53:00]  scope=mc23_13p6TeV
[2025-07-27 18:53:00]  status=None
[2025-07-27 18:53:00]  status_code=0
[2025-07-27 18:53:00]  storage_token=
[2025-07-27 18:53:00]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6747548477/log.45743349._052546.job.log.tgz.1
[2025-07-27 18:53:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/84/log.45743349._052546.job.log.tgz.1
[2025-07-27 18:53:00]  workdir=None
[2025-07-27 18:53:00] ]
[2025-07-27 18:53:00] 2025-07-27 22:52:22,160 | INFO     | transferring file log.45743349._052546.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6747548477/log.45743349._052546.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 18:53:00] 2025-07-27 22:52:22,160 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6747548477/log.45743349._052546.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._052546.job
[2025-07-27 18:53:00] 2025-07-27 22:52:22,181 | INFO     | adding to output.list: log.45743349._052546.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/84/log.45743349._052546.job.log.tg
[2025-07-27 18:53:00] 2025-07-27 22:52:22,182 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 18:53:00] 2025-07-27 22:52:22,182 | INFO     | summary of transferred files:
[2025-07-27 18:53:00] 2025-07-27 22:52:22,182 | INFO     |  -- lfn=log.45743349._052546.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 18:53:00] 2025-07-27 22:52:22,182 | INFO     | stage-out finished correctly
[2025-07-27 18:53:00] 2025-07-27 22:52:22,238 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 18:53:00] 2025-07-27 22:52:22,436 | INFO     | monitor loop #253: job 0:6747548477 is in state 'finished'
[2025-07-27 18:53:00] 2025-07-27 22:52:22,436 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:53:00] 2025-07-27 22:52:22,882 | INFO     | job 6747548477 has state=finished
[2025-07-27 18:53:00] 2025-07-27 22:52:22,882 | INFO     | preparing for final server update for job 6747548477 in state='finished'
[2025-07-27 18:53:00] 2025-07-27 22:52:22,928 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-27 18:53:00] 2025-07-27 22:52:22,929 | INFO     | this job has now completed (state=finished)
[2025-07-27 18:53:00] 2025-07-27 22:52:22,929 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 18:53:00] 2025-07-27 22:52:22,929 | INFO     | log transfer has been attempted: DONE
[2025-07-27 18:53:00] 2025-07-27 22:52:22,929 | INFO     | job 6747548477 has finished - writing final server update
[2025-07-27 18:53:00] 2025-07-27 22:52:22,929 | INFO     | total number of processed events: 400 (read)
[2025-07-27 18:53:00] 2025-07-27 22:52:22,930 | INFO     | executing command: lscpu
[2025-07-27 18:53:00] 2025-07-27 22:52:22,995 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 18:53:00] 2025-07-27 22:52:23,631 | INFO     | PID=732596 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 18:53:00] 2025-07-27 22:52:23,631 | INFO     | .. there are 22 such processes running
[2025-07-27 18:53:00] 2025-07-27 22:52:24,939 | INFO     | monitor loop #254: job 0:6747548477 is in state 'finished'
[2025-07-27 18:53:00] 2025-07-27 22:52:24,939 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:53:00] 2025-07-27 22:52:27,443 | INFO     | monitor loop #255: job 0:6747548477 is in state 'finished'
[2025-07-27 18:53:00] 2025-07-27 22:52:27,443 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:53:00] 2025-07-27 22:52:27,964 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 18:53:00] 2025-07-27 22:52:27,982 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3735.5219843750033
[2025-07-27 18:53:00] 2025-07-27 22:52:28,006 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747548477/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:53:00] 2025-07-27 22:52:28,006 | INFO     | extracted standard info from prmon json
[2025-07-27 18:53:00] 2025-07-27 22:52:28,006 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 18:53:00] 2025-07-27 22:52:28,006 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 18:53:00] 2025-07-27 22:52:28,007 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 18:53:00] 2025-07-27 22:52:28,007 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 18:53:00] 2025-07-27 22:52:28,007 | INFO     | fitting pss+swap vs Time
[2025-07-27 18:53:00] 2025-07-27 22:52:28,007 | INFO     | sum of square deviations: 36465800.0
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | sum of deviations: 405156754.0
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | mean x: 1753655103.0
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | mean y: 2201376.5714285714
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | -- intersect: -19481951149.000904
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | intersect: -19481951149.000904
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | chi2: 0.012999250148363527
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | -- intersect: -19481951149.000904
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | current memory leak: 11.11 B/s (using 49 data points, chi2=0.01)
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | could have reported an average CPU frequency of 3759 MHz (5 samples)
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | ..............................
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | . Timing measurements:
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | . get job = 0 s
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | . initial setup = 2 s
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | . payload setup = 8 s
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | . stage-in = 0 s
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | . payload execution = 3410 s
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | . stage-out = 0 s
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | . log creation = 0 s
[2025-07-27 18:53:00] 2025-07-27 22:52:28,008 | INFO     | ..............................
[2025-07-27 18:53:00] 2025-07-27 22:52:28,064 | INFO     | 
[2025-07-27 18:53:00] 2025-07-27 22:52:28,064 | INFO     | job summary report
[2025-07-27 18:53:00] 2025-07-27 22:52:28,064 | INFO     | --------------------------------------------------
[2025-07-27 18:53:00] 2025-07-27 22:52:28,064 | INFO     | PanDA job id: 6747548477
[2025-07-27 18:53:00] 2025-07-27 22:52:28,064 | INFO     | task id: 45743349
[2025-07-27 18:53:00] 2025-07-27 22:52:28,064 | INFO     | errors: (none)
[2025-07-27 18:53:00] 2025-07-27 22:52:28,064 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 18:53:00] 2025-07-27 22:52:28,064 | INFO     | pilot state: finished 
[2025-07-27 18:53:00] 2025-07-27 22:52:28,064 | INFO     | transexitcode: 0
[2025-07-27 18:53:00] 2025-07-27 22:52:28,064 | INFO     | exeerrorcode: 0
[2025-07-27 18:53:00] 2025-07-27 22:52:28,064 | INFO     | exeerrordiag: 
[2025-07-27 18:53:00] 2025-07-27 22:52:28,064 | INFO     | exitcode: 0
[2025-07-27 18:53:00] 2025-07-27 22:52:28,065 | INFO     | exitmsg: OK
[2025-07-27 18:53:00] 2025-07-27 22:52:28,065 | INFO     | cpuconsumptiontime: 25359 s
[2025-07-27 18:53:00] 2025-07-27 22:52:28,065 | INFO     | nevents: 400
[2025-07-27 18:53:00] 2025-07-27 22:52:28,065 | INFO     | neventsw: 0
[2025-07-27 18:53:00] 2025-07-27 22:52:28,065 | INFO     | pid: 739410
[2025-07-27 18:53:00] 2025-07-27 22:52:28,065 | INFO     | pgrp: 739410
[2025-07-27 18:53:00] 2025-07-27 22:52:28,065 | INFO     | corecount: 8
[2025-07-27 18:53:00] 2025-07-27 22:52:28,065 | INFO     | event service: False
[2025-07-27 18:53:00] 2025-07-27 22:52:28,065 | INFO     | sizes: {0: 2397475, 1: 2397475, 6: 2397765, 11: 2397793, 3422: 2432349, 3428: 2432519}
[2025-07-27 18:53:00] 2025-07-27 22:52:28,065 | INFO     | --------------------------------------------------
[2025-07-27 18:53:00] 2025-07-27 22:52:28,065 | INFO     | 
[2025-07-27 18:53:00] 2025-07-27 22:52:28,065 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 18:53:00] 2025-07-27 22:52:28,089 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,090 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,090 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,090 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,090 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,090 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,090 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,090 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,090 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,090 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,090 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,090 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,090 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,090 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,092 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 18:53:00] 2025-07-27 22:52:28,092 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,092 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 18:53:00] 2025-07-27 22:52:28,092 | INFO     | job 6747548477 has completed (purged errors)
[2025-07-27 18:53:00] 2025-07-27 22:52:28,092 | INFO     | overall cleanup function is called
[2025-07-27 18:53:00] 2025-07-27 22:52:29,100 | INFO     | --- collectZombieJob: --- 10, [739410]
[2025-07-27 18:53:00] 2025-07-27 22:52:29,101 | INFO     | zombie collector waiting for pid 739410
[2025-07-27 18:53:00] 2025-07-27 22:52:29,101 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 18:53:00] 2025-07-27 22:52:29,101 | INFO     | collected zombie processes
[2025-07-27 18:53:00] 2025-07-27 22:52:29,101 | INFO     | will attempt to kill all subprocesses of pid=739410
[2025-07-27 18:53:00] 2025-07-27 22:52:29,460 | INFO     | process IDs to be killed: [739410] (in reverse order)
[2025-07-27 18:53:00] 2025-07-27 22:52:29,607 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 18:53:00] 2025-07-27 22:52:29,608 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 18:53:00] 2025-07-27 22:52:29,629 | INFO     | did not find any defunct processes belonging to 739410
[2025-07-27 18:53:00] 2025-07-27 22:52:29,649 | INFO     | did not find any defunct processes belonging to 739410
[2025-07-27 18:53:00] 2025-07-27 22:52:29,649 | INFO     | ready for new job
[2025-07-27 18:53:00] 2025-07-27 22:52:29,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 18:53:00] 2025-07-27 22:52:29,650 | INFO     | ***************************************
[2025-07-27 18:53:00] 2025-07-27 22:52:29,650 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 18:53:00] 2025-07-27 22:52:29,650 | INFO     | ***************************************
[2025-07-27 18:53:00] 2025-07-27 22:52:29,650 | INFO     | 
[2025-07-27 18:53:00] 2025-07-27 22:52:29,668 | INFO     | architecture information:
[2025-07-27 18:53:00] 2025-07-27 22:52:29,669 | INFO     | executing command: cat /etc/os-release
[2025-07-27 18:53:00] 2025-07-27 22:52:29,686 | INFO     | cat /etc/os-release:
[2025-07-27 18:53:00] NAME="CentOS Linux"
[2025-07-27 18:53:00] VERSION="7 (Core)"
[2025-07-27 18:53:00] ID="centos"
[2025-07-27 18:53:00] ID_LIKE="rhel fedora"
[2025-07-27 18:53:00] VERSION_ID="7"
[2025-07-27 18:53:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 18:53:00] ANSI_COLOR="0;31"
[2025-07-27 18:53:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 18:53:00] HOME_URL="https://www.centos.org/"
[2025-07-27 18:53:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 18:53:00] 
[2025-07-27 18:53:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 18:53:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 18:53:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 18:53:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 18:53:00] 
[2025-07-27 18:53:00] 2025-07-27 22:52:29,686 | INFO     | ***************************************
[2025-07-27 18:53:00] 2025-07-27 22:52:30,189 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 18:53:00] 2025-07-27 22:52:30,205 | INFO     | sufficient remaining disk space (172391137280 B)
[2025-07-27 18:53:00] 2025-07-27 22:52:30,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 18:53:00] 2025-07-27 22:52:30,205 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 18:53:00] 2025-07-27 22:52:30,205 | INFO     | update_server=False
[2025-07-27 18:53:00] 2025-07-27 22:52:30,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 18:53:00] 2025-07-27 22:52:30,249 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 18:53:00] 2025-07-27 22:52:30,952 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:53:00] 2025-07-27 22:52:30,952 | INFO     | aborting loop
[2025-07-27 18:53:00] 2025-07-27 22:52:30,983 | INFO     | all payload control threads have been joined
[2025-07-27 18:53:00] 2025-07-27 22:52:31,140 | INFO     | all data control threads have been joined
[2025-07-27 18:53:00] 2025-07-27 22:52:31,211 | INFO     | [job] retrieve thread has finished
[2025-07-27 18:53:00] 2025-07-27 22:52:31,301 | INFO     | all job control threads have been joined
[2025-07-27 18:53:00] 2025-07-27 22:52:31,325 | INFO     | [payload] failed_post thread has finished
[2025-07-27 18:53:00] 2025-07-27 22:52:31,565 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 18:53:00] 2025-07-27 22:52:31,762 | INFO     | [job] validate thread has finished
[2025-07-27 18:53:00] 2025-07-27 22:52:31,787 | INFO     | [data] copytool_in thread has finished
[2025-07-27 18:53:00] 2025-07-27 22:52:31,941 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 18:53:00] 2025-07-27 22:52:31,953 | INFO     | [job] job monitor thread has finished
[2025-07-27 18:53:00] 2025-07-27 22:52:31,988 | INFO     | [payload] control thread has finished
[2025-07-27 18:53:00] 2025-07-27 22:52:32,029 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 18:53:00] 2025-07-27 22:52:32,145 | INFO     | [data] control thread has finished
[2025-07-27 18:53:00] 2025-07-27 22:52:32,254 | INFO     | [data] copytool_out thread has finished
[2025-07-27 18:53:00] 2025-07-27 22:52:32,271 | INFO     | [payload] validate_post thread has finished
[2025-07-27 18:53:00] 2025-07-27 22:52:32,306 | INFO     | [job] control thread has finished
[2025-07-27 18:53:00] 2025-07-27 22:52:32,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 18:53:00] 2025-07-27 22:52:33,075 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:53:00] 2025-07-27 22:52:34,081 | INFO     | [job] queue monitor thread has finished
[2025-07-27 18:53:00] 2025-07-27 22:52:36,809 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 18:53:00] 2025-07-27 22:52:40,777 | INFO     | job.realtimelogging is not enabled
[2025-07-27 18:53:00] 2025-07-27 22:52:41,782 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 18:53:00] 2025-07-27 22:52:43,446 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140652171663168)>', '<ExcThread(monitor, started 140651362502400)>']
[2025-07-27 18:53:00] 2025-07-27 22:52:48,471 | INFO     | all workflow threads have been joined
[2025-07-27 18:53:00] 2025-07-27 22:52:48,472 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 18:53:00] 2025-07-27 22:52:48,473 | INFO     | traces error code: 0
[2025-07-27 18:53:00] 2025-07-27 22:52:48,473 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 18:53:00] 2025-07-27 22:53:00,226 | INFO     | PID=732596 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 18:53:00] 2025-07-27 22:53:00,228 | INFO     | .. there are 23 such processes running
[2025-07-27 18:53:00] 2025-07-27 22:53:00,228 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 18:53:00] 2025-07-27 22:53:00,229 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 18:53:00] 2025-07-27 22:53:00,229 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 18:53:00] 2025-07-27 22:53:00,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 18:53:00] 2025-07-27 22:53:00,229 | INFO     | [monitor] control thread has ended
[2025-07-27 18:53:00] 2025-07-27 22:53:00,386 [wrapper] ==== pilot stdout END ====
[2025-07-27 18:53:00] 2025-07-27 22:53:00,392 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 18:53:00] 2025-07-27 22:53:00,395 [wrapper] pilotpid: 732596
[2025-07-27 18:53:00] 2025-07-27 22:53:00,399 [wrapper] Pilot exit status: 0
[2025-07-27 18:53:00] 2025-07-27 22:53:00,409 [wrapper] pandaids: 6747548477
[2025-07-27 18:53:00] 2025-07-27 22:53:00,506 [wrapper] cleanup supervisor_pilot 1200384 732597
[2025-07-27 18:53:00] 2025-07-27 22:53:00,511 [wrapper] Test setup, not cleaning
[2025-07-27 18:53:00] 2025-07-27 22:53:00,514 [wrapper] apfmon messages muted
[2025-07-27 18:53:00] 2025-07-27 22:53:00,519 [wrapper] ==== wrapper stdout END ====
[2025-07-27 18:53:00] 2025-07-27 22:53:00,524 [wrapper] ==== wrapper stderr END ====
[2025-07-27 18:53:00]  *** Error codes and diagnostics ***
[2025-07-27 18:53:00]     "exeErrorCode": 0,
[2025-07-27 18:53:00]     "exeErrorDiag": "",
[2025-07-27 18:53:00]     "pilotErrorCode": 0,
[2025-07-27 18:53:00]     "pilotErrorDiag": "",
[2025-07-27 18:53:00]  *** Listing of results directory ***
[2025-07-27 18:53:00] total 352324
[2025-07-27 18:53:00] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:55 pilot3.tar.gz
[2025-07-27 18:53:00] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 12:59 queuedata.json
[2025-07-27 18:53:00] -rwx------. 1 boincer umatlas     36292 Jul 27 12:59 runpilot2-wrapper.sh
[2025-07-27 18:53:00] -rw-r--r--. 1 boincer umatlas       100 Jul 27 17:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 18:53:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 17:54 run_atlas
[2025-07-27 18:53:00] -rw-r--r--. 1 boincer umatlas       105 Jul 27 17:54 job.xml
[2025-07-27 18:53:00] -rw-r--r--. 2 boincer umatlas 145905358 Jul 27 17:54 EVNT.45743347._002810.pool.root.1
[2025-07-27 18:53:00] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:54 start_atlas.sh
[2025-07-27 18:53:00] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 17:54 shared
[2025-07-27 18:53:00] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 17:54 input.tar.gz
[2025-07-27 18:53:00] -rw-r--r--. 1 boincer umatlas         0 Jul 27 17:54 boinc_lockfile
[2025-07-27 18:53:00] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 17:54 pandaJob.out
[2025-07-27 18:53:00] -rw-------. 1 boincer umatlas    980117 Jul 27 17:55 agis_schedconf.cvmfs.json
[2025-07-27 18:53:00] -rw-------. 1 boincer umatlas   1593052 Jul 27 17:55 agis_ddmendpoints.agis.ALL.json
[2025-07-27 18:53:00] drwx------. 4 boincer umatlas      4096 Jul 27 17:55 pilot3
[2025-07-27 18:53:00] -rw-r--r--. 1 boincer umatlas      7162 Jul 27 18:45 init_data.xml
[2025-07-27 18:53:00] -rw-r--r--. 1 boincer umatlas       529 Jul 27 18:51 boinc_task_state.xml
[2025-07-27 18:53:00] -rw-------. 1 boincer umatlas 209704598 Jul 27 18:51 HITS.45743349._052546.pool.root.1
[2025-07-27 18:53:00] -rw-------. 1 boincer umatlas      1032 Jul 27 18:52 memory_monitor_summary.json
[2025-07-27 18:53:00] -rw-------. 1 boincer umatlas        95 Jul 27 18:52 pilot_heartbeat.json
[2025-07-27 18:53:00] -rw-------. 1 boincer umatlas    288788 Jul 27 18:52 log.45743349._052546.job.log.tgz.1
[2025-07-27 18:53:00] -rw-------. 1 boincer umatlas      7772 Jul 27 18:52 heartbeat.json
[2025-07-27 18:53:00] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 18:52 boinc_mmap_file
[2025-07-27 18:53:00] -rw-r--r--. 1 boincer umatlas        27 Jul 27 18:52 wrapper_checkpoint.txt
[2025-07-27 18:53:00] -rw-------. 1 boincer umatlas       822 Jul 27 18:53 pilotlog.txt
[2025-07-27 18:53:00] -rw-------. 1 boincer umatlas    352424 Jul 27 18:53 log.45743349._052546.job.log.1
[2025-07-27 18:53:00] -rw-------. 1 boincer umatlas       357 Jul 27 18:53 output.list
[2025-07-27 18:53:00] -rw-r--r--. 1 boincer umatlas       620 Jul 27 18:53 runtime_log
[2025-07-27 18:53:00] -rw-------. 1 boincer umatlas    665600 Jul 27 18:53 result.tar.gz
[2025-07-27 18:53:00] -rw-------. 1 boincer umatlas       651 Jul 27 18:53 xxlKDmRtJ07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNuVLDmwB4MGn.diag
[2025-07-27 18:53:00] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 18:53 runtime_log.err
[2025-07-27 18:53:00] -rw-r--r--. 1 boincer umatlas     21937 Jul 27 18:53 stderr.txt
[2025-07-27 18:53:00] HITS file was successfully produced:
[2025-07-27 18:53:00] -rw-------. 1 boincer umatlas 209704598 Jul 27 18:51 shared/HITS.pool.root.1
[2025-07-27 18:53:00]  *** Contents of shared directory: ***
[2025-07-27 18:53:00] total 348488
[2025-07-27 18:53:00] -rw-r--r--. 2 boincer umatlas 145905358 Jul 27 17:54 ATLAS.root_0
[2025-07-27 18:53:00] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:54 start_atlas.sh
[2025-07-27 18:53:00] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 17:54 input.tar.gz
[2025-07-27 18:53:00] -rw-------. 1 boincer umatlas 209704598 Jul 27 18:51 HITS.pool.root.1
[2025-07-27 18:53:00] -rw-------. 1 boincer umatlas    665600 Jul 27 18:53 result.tar.gz
18:53:02 (728801): run_atlas exited; CPU time 25420.649638
18:53:02 (728801): called boinc_finish(0)

</stderr_txt>
]]>

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