Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:53:12 (251919): wrapper (7.7.26015): starting
17:53:12 (251919): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 17:53:12] Arguments: --nthreads 8
[2025-07-27 17:53:12] Threads: 8
[2025-07-27 17:53:12] Checking for CVMFS
[2025-07-27 17:53:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:53:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:53:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:53:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:53:13] 2.13.1.0 645510 14749 262784 148825 3 196 37083977 40960001 9722 16776704 0 51542070 99.794 41428136 36979 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 17:53:13] CVMFS is ok
[2025-07-27 17:53:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:53:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:53:13] Further information can be found at the LHC@home message board.
[2025-07-27 17:53:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:53:13] Checking for apptainer binary...
[2025-07-27 17:53:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:53:13] Running /usr/bin/apptainer --version
[2025-07-27 17:53:13] apptainer version 1.4.1-1.el9
[2025-07-27 17:53:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:53:13] c-212-5.aglt2.org
[2025-07-27 17:53:13] apptainer works
[2025-07-27 17:53:13] Set ATHENA_PROC_NUMBER=8
[2025-07-27 17:53:13] Set ATHENA_CORE_NUMBER=8
[2025-07-27 17:53:13] Starting ATLAS job with PandaID=6747535597
[2025-07-27 17:53:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:11:53]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:11:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 19:11:53]  replicas=None
[2025-07-27 19:11:53]  scope=mc23_13p6TeV
[2025-07-27 19:11:53]  status=None
[2025-07-27 19:11:53]  status_code=0
[2025-07-27 19:11:53]  storage_token=
[2025-07-27 19:11:53]  surl=/tmp/boinchome/slots/8/PanDA_Pilot-6747535597/log.45743349._052365.job.log.tgz.1
[2025-07-27 19:11:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/d3/log.45743349._052365.job.log.tgz.1
[2025-07-27 19:11:53]  workdir=None
[2025-07-27 19:11:53] ]
[2025-07-27 19:11:53] 2025-07-27 23:11:11,827 | INFO     | transferring file log.45743349._052365.job.log.tgz.1 from /tmp/boinchome/slots/8/PanDA_Pilot-6747535597/log.45743349._052365.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 19:11:53] 2025-07-27 23:11:11,827 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/8/PanDA_Pilot-6747535597/log.45743349._052365.job.log.tgz.1 /tmp/boinchome/slots/8/log.45743349._052365.job
[2025-07-27 19:11:53] 2025-07-27 23:11:11,850 | INFO     | adding to output.list: log.45743349._052365.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/d3/log.45743349._052365.job.log.tg
[2025-07-27 19:11:53] 2025-07-27 23:11:11,851 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 19:11:53] 2025-07-27 23:11:11,851 | INFO     | summary of transferred files:
[2025-07-27 19:11:53] 2025-07-27 23:11:11,851 | INFO     |  -- lfn=log.45743349._052365.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:11:53] 2025-07-27 23:11:11,851 | INFO     | stage-out finished correctly
[2025-07-27 19:11:53] 2025-07-27 23:11:12,719 | INFO     | monitor loop #343: job 0:6747535597 is in state 'finished'
[2025-07-27 19:11:53] 2025-07-27 23:11:12,719 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:11:53] 2025-07-27 23:11:14,970 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:11:53] 2025-07-27 23:11:15,222 | INFO     | monitor loop #344: job 0:6747535597 is in state 'finished'
[2025-07-27 19:11:53] 2025-07-27 23:11:15,223 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:11:53] 2025-07-27 23:11:16,986 | INFO     | job 6747535597 has state=finished
[2025-07-27 19:11:53] 2025-07-27 23:11:16,986 | INFO     | preparing for final server update for job 6747535597 in state='finished'
[2025-07-27 19:11:53] 2025-07-27 23:11:16,986 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:11:53] 2025-07-27 23:11:16,986 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:11:53] 2025-07-27 23:11:16,987 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:11:53] 2025-07-27 23:11:16,987 | INFO     | job 6747535597 has finished - writing final server update
[2025-07-27 19:11:53] 2025-07-27 23:11:16,987 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:11:53] 2025-07-27 23:11:16,988 | INFO     | executing command: lscpu
[2025-07-27 19:11:53] 2025-07-27 23:11:17,055 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:11:53] 2025-07-27 23:11:17,726 | INFO     | monitor loop #345: job 0:6747535597 is in state 'finished'
[2025-07-27 19:11:53] 2025-07-27 23:11:17,726 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:11:53] 2025-07-27 23:11:17,836 | INFO     | 4674s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-27 19:11:53] 2025-07-27 23:11:20,230 | INFO     | monitor loop #346: job 0:6747535597 is in state 'finished'
[2025-07-27 19:11:53] 2025-07-27 23:11:20,230 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:11:53] 2025-07-27 23:11:21,540 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 19:11:53] 2025-07-27 23:11:21,546 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3296.2731145833336
[2025-07-27 19:11:53] 2025-07-27 23:11:21,561 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6747535597/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:11:53] 2025-07-27 23:11:21,562 | INFO     | extracted standard info from prmon json
[2025-07-27 19:11:53] 2025-07-27 23:11:21,562 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:11:53] 2025-07-27 23:11:21,562 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:11:53] 2025-07-27 23:11:21,562 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:11:53] 2025-07-27 23:11:21,562 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:11:53] 2025-07-27 23:11:21,564 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:11:53] 2025-07-27 23:11:21,564 | INFO     | sum of square deviations: 101843770.0
[2025-07-27 19:11:53] 2025-07-27 23:11:21,565 | INFO     | sum of deviations: 248549257.99999997
[2025-07-27 19:11:53] 2025-07-27 23:11:21,565 | INFO     | mean x: 1753655616.0
[2025-07-27 19:11:53] 2025-07-27 23:11:21,565 | INFO     | mean y: 2522918.797101449
[2025-07-27 19:11:53] 2025-07-27 23:11:21,565 | INFO     | -- intersect: -4277265645.0427175
[2025-07-27 19:11:53] 2025-07-27 23:11:21,565 | INFO     | intersect: -4277265645.0427175
[2025-07-27 19:11:53] 2025-07-27 23:11:21,565 | INFO     | chi2: 0.0009050213020050378
[2025-07-27 19:11:53] 2025-07-27 23:11:21,565 | INFO     | -- intersect: -4277265645.0427175
[2025-07-27 19:11:53] 2025-07-27 23:11:21,566 | INFO     | current memory leak: 2.44 B/s (using 69 data points, chi2=0.00)
[2025-07-27 19:11:53] 2025-07-27 23:11:21,566 | INFO     | could have reported an average CPU frequency of 3280 MHz (6 samples)
[2025-07-27 19:11:53] 2025-07-27 23:11:21,566 | INFO     | ..............................
[2025-07-27 19:11:53] 2025-07-27 23:11:21,566 | INFO     | . Timing measurements:
[2025-07-27 19:11:53] 2025-07-27 23:11:21,566 | INFO     | . get job = 0 s
[2025-07-27 19:11:53] 2025-07-27 23:11:21,566 | INFO     | . initial setup = 2 s
[2025-07-27 19:11:53] 2025-07-27 23:11:21,566 | INFO     | . payload setup = 8 s
[2025-07-27 19:11:53] 2025-07-27 23:11:21,566 | INFO     | . stage-in = 0 s
[2025-07-27 19:11:53] 2025-07-27 23:11:21,566 | INFO     | . payload execution = 4636 s
[2025-07-27 19:11:53] 2025-07-27 23:11:21,567 | INFO     | . stage-out = 0 s
[2025-07-27 19:11:53] 2025-07-27 23:11:21,567 | INFO     | . log creation = 0 s
[2025-07-27 19:11:53] 2025-07-27 23:11:21,567 | INFO     | ..............................
[2025-07-27 19:11:53] 2025-07-27 23:11:21,649 | INFO     | 
[2025-07-27 19:11:53] 2025-07-27 23:11:21,650 | INFO     | job summary report
[2025-07-27 19:11:53] 2025-07-27 23:11:21,650 | INFO     | --------------------------------------------------
[2025-07-27 19:11:53] 2025-07-27 23:11:21,650 | INFO     | PanDA job id: 6747535597
[2025-07-27 19:11:53] 2025-07-27 23:11:21,650 | INFO     | task id: 45743349
[2025-07-27 19:11:53] 2025-07-27 23:11:21,650 | INFO     | errors: (none)
[2025-07-27 19:11:53] 2025-07-27 23:11:21,650 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:11:53] 2025-07-27 23:11:21,651 | INFO     | pilot state: finished 
[2025-07-27 19:11:53] 2025-07-27 23:11:21,651 | INFO     | transexitcode: 0
[2025-07-27 19:11:53] 2025-07-27 23:11:21,651 | INFO     | exeerrorcode: 0
[2025-07-27 19:11:53] 2025-07-27 23:11:21,651 | INFO     | exeerrordiag: 
[2025-07-27 19:11:53] 2025-07-27 23:11:21,651 | INFO     | exitcode: 0
[2025-07-27 19:11:53] 2025-07-27 23:11:21,651 | INFO     | exitmsg: OK
[2025-07-27 19:11:53] 2025-07-27 23:11:21,651 | INFO     | cpuconsumptiontime: 34058 s
[2025-07-27 19:11:53] 2025-07-27 23:11:21,651 | INFO     | nevents: 400
[2025-07-27 19:11:53] 2025-07-27 23:11:21,651 | INFO     | neventsw: 0
[2025-07-27 19:11:53] 2025-07-27 23:11:21,651 | INFO     | pid: 263221
[2025-07-27 19:11:53] 2025-07-27 23:11:21,651 | INFO     | pgrp: 263221
[2025-07-27 19:11:53] 2025-07-27 23:11:21,651 | INFO     | corecount: 8
[2025-07-27 19:11:53] 2025-07-27 23:11:21,651 | INFO     | event service: False
[2025-07-27 19:11:53] 2025-07-27 23:11:21,652 | INFO     | sizes: {0: 2397248, 1: 2397447, 6: 2397709, 11: 2397737, 4647: 2423835, 4649: 2432833, 4652: 2433017, 4659: 2433211}
[2025-07-27 19:11:53] 2025-07-27 23:11:21,652 | INFO     | --------------------------------------------------
[2025-07-27 19:11:53] 2025-07-27 23:11:21,652 | INFO     | 
[2025-07-27 19:11:53] 2025-07-27 23:11:21,652 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-07-27 19:11:53] 2025-07-27 23:11:21,677 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,677 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,678 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,678 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,678 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,678 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,678 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,678 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,678 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,678 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,678 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,678 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,678 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,678 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,679 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,679 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,679 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,679 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:11:53] 2025-07-27 23:11:21,679 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,679 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:11:53] 2025-07-27 23:11:21,679 | INFO     | job 6747535597 has completed (purged errors)
[2025-07-27 19:11:53] 2025-07-27 23:11:21,679 | INFO     | overall cleanup function is called
[2025-07-27 19:11:53] 2025-07-27 23:11:22,688 | INFO     | --- collectZombieJob: --- 10, [263221]
[2025-07-27 19:11:53] 2025-07-27 23:11:22,688 | INFO     | zombie collector waiting for pid 263221
[2025-07-27 19:11:53] 2025-07-27 23:11:22,688 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:11:53] 2025-07-27 23:11:22,688 | INFO     | collected zombie processes
[2025-07-27 19:11:53] 2025-07-27 23:11:22,688 | INFO     | will attempt to kill all subprocesses of pid=263221
[2025-07-27 19:11:53] 2025-07-27 23:11:23,073 | INFO     | process IDs to be killed: [263221] (in reverse order)
[2025-07-27 19:11:53] 2025-07-27 23:11:23,204 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:11:53] 2025-07-27 23:11:23,205 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:11:53] 2025-07-27 23:11:23,221 | INFO     | did not find any defunct processes belonging to 263221
[2025-07-27 19:11:53] 2025-07-27 23:11:23,235 | INFO     | did not find any defunct processes belonging to 263221
[2025-07-27 19:11:53] 2025-07-27 23:11:23,236 | INFO     | ready for new job
[2025-07-27 19:11:53] 2025-07-27 23:11:23,236 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:11:53] 2025-07-27 23:11:23,238 | INFO     | ***************************************
[2025-07-27 19:11:53] 2025-07-27 23:11:23,238 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:11:53] 2025-07-27 23:11:23,238 | INFO     | ***************************************
[2025-07-27 19:11:53] 2025-07-27 23:11:23,238 | INFO     | 
[2025-07-27 19:11:53] 2025-07-27 23:11:23,243 | INFO     | architecture information:
[2025-07-27 19:11:53] 2025-07-27 23:11:23,243 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:11:53] 2025-07-27 23:11:23,267 | INFO     | cat /etc/os-release:
[2025-07-27 19:11:53] NAME="CentOS Linux"
[2025-07-27 19:11:53] VERSION="7 (Core)"
[2025-07-27 19:11:53] ID="centos"
[2025-07-27 19:11:53] ID_LIKE="rhel fedora"
[2025-07-27 19:11:53] VERSION_ID="7"
[2025-07-27 19:11:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:11:53] ANSI_COLOR="0;31"
[2025-07-27 19:11:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:11:53] HOME_URL="https://www.centos.org/"
[2025-07-27 19:11:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:11:53] 
[2025-07-27 19:11:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:11:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:11:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:11:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:11:53] 
[2025-07-27 19:11:53] 2025-07-27 23:11:23,267 | INFO     | ***************************************
[2025-07-27 19:11:53] 2025-07-27 23:11:23,771 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-07-27 19:11:53] 2025-07-27 23:11:23,796 | INFO     | sufficient remaining disk space (124953559040 B)
[2025-07-27 19:11:53] 2025-07-27 23:11:23,796 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:11:53] 2025-07-27 23:11:23,796 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:11:53] 2025-07-27 23:11:23,796 | INFO     | update_server=False
[2025-07-27 19:11:53] 2025-07-27 23:11:23,797 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:11:53] 2025-07-27 23:11:23,798 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:11:53] 2025-07-27 23:11:23,798 | INFO     | aborting loop
[2025-07-27 19:11:53] 2025-07-27 23:11:23,914 | INFO     | all data control threads have been joined
[2025-07-27 19:11:53] 2025-07-27 23:11:24,556 | INFO     | all job control threads have been joined
[2025-07-27 19:11:53] 2025-07-27 23:11:24,593 | INFO     | all payload control threads have been joined
[2025-07-27 19:11:53] 2025-07-27 23:11:24,802 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:11:53] 2025-07-27 23:11:24,804 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:11:53] 2025-07-27 23:11:24,904 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:11:53] 2025-07-27 23:11:24,920 | INFO     | [data] control thread has finished
[2025-07-27 19:11:53] 2025-07-27 23:11:24,944 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:11:53] 2025-07-27 23:11:25,305 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:11:53] 2025-07-27 23:11:25,557 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:11:53] 2025-07-27 23:11:25,562 | INFO     | [job] control thread has finished
[2025-07-27 19:11:53] 2025-07-27 23:11:25,598 | INFO     | [payload] control thread has finished
[2025-07-27 19:11:53] 2025-07-27 23:11:25,803 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:11:53] 2025-07-27 23:11:25,838 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:11:53] 2025-07-27 23:11:25,853 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:11:53] 2025-07-27 23:11:25,881 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:11:53] 2025-07-27 23:11:26,001 | INFO     | [job] validate thread has finished
[2025-07-27 19:11:53] 2025-07-27 23:11:26,660 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:11:53] 2025-07-27 23:11:26,950 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:11:53] 2025-07-27 23:11:27,660 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:11:53] 2025-07-27 23:11:29,563 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:11:53] 2025-07-27 23:11:34,316 | INFO     | job.realtimelogging is not enabled
[2025-07-27 19:11:53] 2025-07-27 23:11:35,321 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:11:53] 2025-07-27 23:11:37,254 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140380006254400)>', '<ExcThread(monitor, started 140379496101632)>']
[2025-07-27 19:11:53] 2025-07-27 23:11:42,279 | INFO     | all workflow threads have been joined
[2025-07-27 19:11:53] 2025-07-27 23:11:42,279 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:11:53] 2025-07-27 23:11:42,280 | INFO     | traces error code: 0
[2025-07-27 19:11:53] 2025-07-27 23:11:42,280 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:11:53] 2025-07-27 23:11:53,381 | INFO     | PID=255506 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 19:11:53] 2025-07-27 23:11:53,382 | INFO     | .. there are 14 such processes running
[2025-07-27 19:11:53] 2025-07-27 23:11:53,382 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:11:53] 2025-07-27 23:11:53,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:11:53] 2025-07-27 23:11:53,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:11:53] 2025-07-27 23:11:53,382 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:11:53] 2025-07-27 23:11:53,382 | INFO     | [monitor] control thread has ended
[2025-07-27 19:11:53] 2025-07-27 23:11:53,493 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:11:53] 2025-07-27 23:11:53,497 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:11:53] 2025-07-27 23:11:53,503 [wrapper] pilotpid: 255506
[2025-07-27 19:11:53] 2025-07-27 23:11:53,506 [wrapper] Pilot exit status: 0
[2025-07-27 19:11:53] 2025-07-27 23:11:53,520 [wrapper] pandaids: 6747535597
[2025-07-27 19:11:53] 2025-07-27 23:11:53,605 [wrapper] cleanup supervisor_pilot  542626 255507
[2025-07-27 19:11:53] 2025-07-27 23:11:53,611 [wrapper] Test setup, not cleaning
[2025-07-27 19:11:53] 2025-07-27 23:11:53,614 [wrapper] apfmon messages muted
[2025-07-27 19:11:53] 2025-07-27 23:11:53,618 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:11:53] 2025-07-27 23:11:53,622 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:11:53]  *** Error codes and diagnostics ***
[2025-07-27 19:11:53]     "exeErrorCode": 0,
[2025-07-27 19:11:53]     "exeErrorDiag": "",
[2025-07-27 19:11:53]     "pilotErrorCode": 0,
[2025-07-27 19:11:53]     "pilotErrorDiag": "",
[2025-07-27 19:11:53]  *** Listing of results directory ***
[2025-07-27 19:11:53] total 359600
[2025-07-27 19:11:53] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:02 pilot3.tar.gz
[2025-07-27 19:11:53] -rwx------. 1 boincer umatlas     36292 Jul 27 12:39 runpilot2-wrapper.sh
[2025-07-27 19:11:53] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 12:39 queuedata.json
[2025-07-27 19:11:53] -rw-r--r--. 1 boincer umatlas       100 Jul 27 17:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:11:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 17:53 run_atlas
[2025-07-27 19:11:53] -rw-r--r--. 1 boincer umatlas       105 Jul 27 17:53 job.xml
[2025-07-27 19:11:53] -rw-r--r--. 2 boincer umatlas 147916450 Jul 27 17:53 EVNT.45743347._000207.pool.root.1
[2025-07-27 19:11:53] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:53 start_atlas.sh
[2025-07-27 19:11:53] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 17:53 shared
[2025-07-27 19:11:53] -rw-r--r--. 2 boincer umatlas    542878 Jul 27 17:53 input.tar.gz
[2025-07-27 19:11:53] -rw-r--r--. 1 boincer umatlas         0 Jul 27 17:53 boinc_lockfile
[2025-07-27 19:11:53] -rw-r--r--. 1 boincer umatlas      2560 Jul 27 17:53 pandaJob.out
[2025-07-27 19:11:53] -rw-------. 1 boincer umatlas    980117 Jul 27 17:53 agis_schedconf.cvmfs.json
[2025-07-27 19:11:53] -rw-------. 1 boincer umatlas   1593052 Jul 27 17:53 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:11:53] drwx------. 4 boincer umatlas      4096 Jul 27 17:53 pilot3
[2025-07-27 19:11:53] -rw-------. 1 boincer umatlas 214918504 Jul 27 19:10 HITS.45743349._052365.pool.root.1
[2025-07-27 19:11:53] -rw-r--r--. 1 boincer umatlas       529 Jul 27 19:10 boinc_task_state.xml
[2025-07-27 19:11:53] -rw-------. 1 boincer umatlas      1026 Jul 27 19:11 memory_monitor_summary.json
[2025-07-27 19:11:53] -rw-------. 1 boincer umatlas        95 Jul 27 19:11 pilot_heartbeat.json
[2025-07-27 19:11:53] -rw-------. 1 boincer umatlas    298228 Jul 27 19:11 log.45743349._052365.job.log.tgz.1
[2025-07-27 19:11:53] -rw-r--r--. 1 boincer umatlas      6946 Jul 27 19:11 init_data.xml
[2025-07-27 19:11:53] -rw-------. 1 boincer umatlas      7756 Jul 27 19:11 heartbeat.json
[2025-07-27 19:11:53] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:11 boinc_mmap_file
[2025-07-27 19:11:53] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:11 wrapper_checkpoint.txt
[2025-07-27 19:11:53] -rw-------. 1 boincer umatlas       822 Jul 27 19:11 pilotlog.txt
[2025-07-27 19:11:53] -rw-------. 1 boincer umatlas    459607 Jul 27 19:11 log.45743349._052365.job.log.1
[2025-07-27 19:11:53] -rw-------. 1 boincer umatlas       357 Jul 27 19:11 output.list
[2025-07-27 19:11:53] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:11 runtime_log
[2025-07-27 19:11:53] -rw-------. 1 boincer umatlas    778240 Jul 27 19:11 result.tar.gz
[2025-07-27 19:11:53] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 19:11 runtime_log.err
[2025-07-27 19:11:53] -rw-------. 1 boincer umatlas       651 Jul 27 19:11 3GANDmgaJ07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEqVLDmEF0dYo.diag
[2025-07-27 19:11:53] -rw-r--r--. 1 boincer umatlas     21924 Jul 27 19:11 stderr.txt
[2025-07-27 19:11:53] HITS file was successfully produced:
[2025-07-27 19:11:53] -rw-------. 1 boincer umatlas 214918504 Jul 27 19:10 shared/HITS.pool.root.1
[2025-07-27 19:11:53]  *** Contents of shared directory: ***
[2025-07-27 19:11:53] total 355652
[2025-07-27 19:11:53] -rw-r--r--. 2 boincer umatlas 147916450 Jul 27 17:53 ATLAS.root_0
[2025-07-27 19:11:53] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:53 start_atlas.sh
[2025-07-27 19:11:53] -rw-r--r--. 2 boincer umatlas    542878 Jul 27 17:53 input.tar.gz
[2025-07-27 19:11:53] -rw-------. 1 boincer umatlas 214918504 Jul 27 19:10 HITS.pool.root.1
[2025-07-27 19:11:53] -rw-------. 1 boincer umatlas    778240 Jul 27 19:11 result.tar.gz
19:11:55 (251919): run_atlas exited; CPU time 34169.636278
19:11:55 (251919): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN