Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:20:22 (4068984): wrapper (7.7.26015): starting
04:20:22 (4068984): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 04:20:22] Arguments: --nthreads 12
[2025-07-28 04:20:22] Threads: 12
[2025-07-28 04:20:22] Checking for CVMFS
[2025-07-28 04:20:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 04:20:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 04:20:22] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 04:20:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 04:20:22] 2.13.0.0 30494 4713 52376 148836 1 133 2204246 4096000 2724 130560 0 10890042 99.997 168573 259 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-28 04:20:22] CVMFS is ok
[2025-07-28 04:20:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 04:20:22] Checking for apptainer binary...
[2025-07-28 04:20:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 04:20:22] Running /usr/bin/apptainer --version
[2025-07-28 04:20:22] apptainer version 1.4.1
[2025-07-28 04:20:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 04:20:22] dualxeon1
[2025-07-28 04:20:22] apptainer works
[2025-07-28 04:20:22] Set ATHENA_PROC_NUMBER=12
[2025-07-28 04:20:22] Set ATHENA_CORE_NUMBER=12
[2025-07-28 04:20:22] Starting ATLAS job with PandaID=6747544583
[2025-07-28 04:20:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 08:03:54]  *** The last 200 lines of the pilot log: ***
[2025-07-28 08:03:54] 2025-07-28 08:03:21,626 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 08:03:54] 2025-07-28 08:03:21,627 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 08:03:54] 2025-07-28 08:03:21,632 | INFO     | fitting pss+swap vs Time
[2025-07-28 08:03:54] 2025-07-28 08:03:21,632 | INFO     | sum of square deviations: 3256879670.0
[2025-07-28 08:03:54] 2025-07-28 08:03:21,634 | INFO     | sum of deviations: 9309246355.999998
[2025-07-28 08:03:54] 2025-07-28 08:03:21,634 | INFO     | mean x: 1753683106.0
[2025-07-28 08:03:54] 2025-07-28 08:03:21,634 | INFO     | mean y: 2645581.3242009133
[2025-07-28 08:03:54] 2025-07-28 08:03:21,634 | INFO     | -- intersect: -5009964560.366806
[2025-07-28 08:03:54] 2025-07-28 08:03:21,634 | INFO     | intersect: -5009964560.366806
[2025-07-28 08:03:54] 2025-07-28 08:03:21,635 | INFO     | chi2: 2.472185554019374
[2025-07-28 08:03:54] 2025-07-28 08:03:21,635 | INFO     | sum of square deviations: 3038856977.5
[2025-07-28 08:03:54] 2025-07-28 08:03:21,637 | INFO     | sum of deviations: 25044969866.500004
[2025-07-28 08:03:54] 2025-07-28 08:03:21,637 | INFO     | mean x: 1753682953.5
[2025-07-28 08:03:54] 2025-07-28 08:03:21,637 | INFO     | mean y: 2656380.64953271
[2025-07-28 08:03:54] 2025-07-28 08:03:21,637 | INFO     | -- intersect: -14450454460.366423
[2025-07-28 08:03:54] 2025-07-28 08:03:21,637 | INFO     | intersect: -14450454460.366423
[2025-07-28 08:03:54] 2025-07-28 08:03:21,638 | INFO     | chi2: 1.6430591074965997
[2025-07-28 08:03:54] 2025-07-28 08:03:21,638 | INFO     | current chi2=1.6430591074965997 (change=33.53819640175264 %)
[2025-07-28 08:03:54] 2025-07-28 08:03:21,638 | INFO     | sum of square deviations: 2830787960.0
[2025-07-28 08:03:54] 2025-07-28 08:03:21,640 | INFO     | sum of deviations: 24476955098.999996
[2025-07-28 08:03:54] 2025-07-28 08:03:21,640 | INFO     | mean x: 1753682801.0
[2025-07-28 08:03:54] 2025-07-28 08:03:21,640 | INFO     | mean y: 2655964.224880383
[2025-07-28 08:03:54] 2025-07-28 08:03:21,640 | INFO     | -- intersect: -15160901244.759981
[2025-07-28 08:03:54] 2025-07-28 08:03:21,640 | INFO     | intersect: -15160901244.759981
[2025-07-28 08:03:54] 2025-07-28 08:03:21,641 | INFO     | chi2: 1.64406916622942
[2025-07-28 08:03:54] 2025-07-28 08:03:21,641 | INFO     | current chi2=1.64406916622942 (change=-0.06147427857049449 %)
[2025-07-28 08:03:54] 2025-07-28 08:03:21,641 | INFO     | right removable region: 208
[2025-07-28 08:03:54] 2025-07-28 08:03:21,641 | INFO     | sum of square deviations: 3038856977.5
[2025-07-28 08:03:54] 2025-07-28 08:03:21,643 | INFO     | sum of deviations: -28504168754.999996
[2025-07-28 08:03:54] 2025-07-28 08:03:21,643 | INFO     | mean x: 1753683258.5
[2025-07-28 08:03:54] 2025-07-28 08:03:21,643 | INFO     | mean y: 2671791.831775701
[2025-07-28 08:03:54] 2025-07-28 08:03:21,643 | INFO     | -- intersect: 16452042036.37211
[2025-07-28 08:03:54] 2025-07-28 08:03:21,644 | INFO     | intersect: 16452042036.37211
[2025-07-28 08:03:54] 2025-07-28 08:03:21,644 | INFO     | chi2: 0.9827418118404325
[2025-07-28 08:03:54] 2025-07-28 08:03:21,644 | INFO     | current chi2=0.9827418118404325 (change=60.24805620910399 %)
[2025-07-28 08:03:54] 2025-07-28 08:03:21,645 | INFO     | sum of square deviations: 2830787960.0
[2025-07-28 08:03:54] 2025-07-28 08:03:21,646 | INFO     | sum of deviations: -35857218860.0
[2025-07-28 08:03:54] 2025-07-28 08:03:21,646 | INFO     | mean x: 1753683411.0
[2025-07-28 08:03:54] 2025-07-28 08:03:21,646 | INFO     | mean y: 2677181.1196172247
[2025-07-28 08:03:54] 2025-07-28 08:03:21,646 | INFO     | -- intersect: 22216354350.842472
[2025-07-28 08:03:54] 2025-07-28 08:03:21,647 | INFO     | intersect: 22216354350.842472
[2025-07-28 08:03:54] 2025-07-28 08:03:21,647 | INFO     | chi2: 0.9307675668826745
[2025-07-28 08:03:54] 2025-07-28 08:03:21,647 | INFO     | current chi2=0.9307675668826745 (change=5.288697838186321 %)
[2025-07-28 08:03:54] 2025-07-28 08:03:21,647 | INFO     | left removable region: 20
[2025-07-28 08:03:54] 2025-07-28 08:03:21,648 | INFO     | sum of square deviations: 2060343747.0
[2025-07-28 08:03:54] 2025-07-28 08:03:21,649 | INFO     | sum of deviations: -17935127707.0
[2025-07-28 08:03:54] 2025-07-28 08:03:21,649 | INFO     | mean x: 1753683380.5
[2025-07-28 08:03:54] 2025-07-28 08:03:21,649 | INFO     | mean y: 2688466.0
[2025-07-28 08:03:54] 2025-07-28 08:03:21,649 | INFO     | -- intersect: 15268362183.168797
[2025-07-28 08:03:54] 2025-07-28 08:03:21,649 | INFO     | intersect: 15268362183.168797
[2025-07-28 08:03:54] 2025-07-28 08:03:21,650 | INFO     | chi2: 0.051073717064790775
[2025-07-28 08:03:54] 2025-07-28 08:03:21,650 | INFO     | -- intersect: 15268362183.168797
[2025-07-28 08:03:54] 2025-07-28 08:03:21,650 | INFO     | current memory leak: -8.70 B/s (using 188 data points, chi2=0.05)
[2025-07-28 08:03:54] 2025-07-28 08:03:21,650 | INFO     | could have reported an average CPU frequency of 2586 MHz (11 samples)
[2025-07-28 08:03:54] 2025-07-28 08:03:21,651 | INFO     | ..............................
[2025-07-28 08:03:54] 2025-07-28 08:03:21,651 | INFO     | . Timing measurements:
[2025-07-28 08:03:54] 2025-07-28 08:03:21,651 | INFO     | . get job = 0 s
[2025-07-28 08:03:54] 2025-07-28 08:03:21,651 | INFO     | . initial setup = 1 s
[2025-07-28 08:03:54] 2025-07-28 08:03:21,651 | INFO     | . payload setup = 6 s
[2025-07-28 08:03:54] 2025-07-28 08:03:21,651 | INFO     | . stage-in = 0 s
[2025-07-28 08:03:54] 2025-07-28 08:03:21,651 | INFO     | . payload execution = 13331 s
[2025-07-28 08:03:54] 2025-07-28 08:03:21,652 | INFO     | . stage-out = 1 s
[2025-07-28 08:03:54] 2025-07-28 08:03:21,652 | INFO     | . log creation = 0 s
[2025-07-28 08:03:54] 2025-07-28 08:03:21,652 | INFO     | ..............................
[2025-07-28 08:03:54] 2025-07-28 08:03:21,864 | INFO     | 
[2025-07-28 08:03:54] 2025-07-28 08:03:21,864 | INFO     | job summary report
[2025-07-28 08:03:54] 2025-07-28 08:03:21,864 | INFO     | --------------------------------------------------
[2025-07-28 08:03:54] 2025-07-28 08:03:21,864 | INFO     | PanDA job id: 6747544583
[2025-07-28 08:03:54] 2025-07-28 08:03:21,864 | INFO     | task id: 45758484
[2025-07-28 08:03:54] 2025-07-28 08:03:21,864 | INFO     | errors: (none)
[2025-07-28 08:03:54] 2025-07-28 08:03:21,864 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 08:03:54] 2025-07-28 08:03:21,865 | INFO     | pilot state: finished 
[2025-07-28 08:03:54] 2025-07-28 08:03:21,865 | INFO     | transexitcode: 0
[2025-07-28 08:03:54] 2025-07-28 08:03:21,865 | INFO     | exeerrorcode: 0
[2025-07-28 08:03:54] 2025-07-28 08:03:21,865 | INFO     | exeerrordiag: 
[2025-07-28 08:03:54] 2025-07-28 08:03:21,865 | INFO     | exitcode: 0
[2025-07-28 08:03:54] 2025-07-28 08:03:21,865 | INFO     | exitmsg: OK
[2025-07-28 08:03:54] 2025-07-28 08:03:21,865 | INFO     | cpuconsumptiontime: 94674 s
[2025-07-28 08:03:54] 2025-07-28 08:03:21,865 | INFO     | nevents: 400
[2025-07-28 08:03:54] 2025-07-28 08:03:21,865 | INFO     | neventsw: 0
[2025-07-28 08:03:54] 2025-07-28 08:03:21,866 | INFO     | pid: 4079449
[2025-07-28 08:03:54] 2025-07-28 08:03:21,866 | INFO     | pgrp: 4079449
[2025-07-28 08:03:54] 2025-07-28 08:03:21,866 | INFO     | corecount: 12
[2025-07-28 08:03:54] 2025-07-28 08:03:21,866 | INFO     | event service: False
[2025-07-28 08:03:54] 2025-07-28 08:03:21,866 | INFO     | sizes: {0: 2397320, 1: 2397519, 5: 2397781, 11: 2397837, 13341: 2428068, 13343: 2437112, 13345: 2437296, 13355: 2437490}
[2025-07-28 08:03:54] 2025-07-28 08:03:21,866 | INFO     | --------------------------------------------------
[2025-07-28 08:03:54] 2025-07-28 08:03:21,866 | INFO     | 
[2025-07-28 08:03:54] 2025-07-28 08:03:21,866 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-07-28 08:03:54] 2025-07-28 08:03:21,907 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,907 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,907 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,907 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,908 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,908 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,908 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,908 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,908 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,908 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,908 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,908 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,909 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,909 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,909 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,909 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,913 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,913 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 08:03:54] 2025-07-28 08:03:21,913 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,913 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 08:03:54] 2025-07-28 08:03:21,913 | INFO     | job 6747544583 has completed (purged errors)
[2025-07-28 08:03:54] 2025-07-28 08:03:21,913 | INFO     | overall cleanup function is called
[2025-07-28 08:03:54] 2025-07-28 08:03:22,931 | INFO     | --- collectZombieJob: --- 10, [4079449]
[2025-07-28 08:03:54] 2025-07-28 08:03:22,931 | INFO     | zombie collector waiting for pid 4079449
[2025-07-28 08:03:54] 2025-07-28 08:03:22,931 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 08:03:54] 2025-07-28 08:03:22,931 | INFO     | collected zombie processes
[2025-07-28 08:03:54] 2025-07-28 08:03:22,931 | INFO     | will attempt to kill all subprocesses of pid=4079449
[2025-07-28 08:03:54] 2025-07-28 08:03:23,278 | INFO     | process IDs to be killed: [4079449] (in reverse order)
[2025-07-28 08:03:54] 2025-07-28 08:03:23,371 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 08:03:54] 2025-07-28 08:03:23,371 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 08:03:54] 2025-07-28 08:03:23,386 | INFO     | did not find any defunct processes belonging to 4079449
[2025-07-28 08:03:54] 2025-07-28 08:03:23,395 | INFO     | did not find any defunct processes belonging to 4079449
[2025-07-28 08:03:54] 2025-07-28 08:03:23,395 | INFO     | ready for new job
[2025-07-28 08:03:54] 2025-07-28 08:03:23,396 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 08:03:54] 2025-07-28 08:03:23,401 | INFO     | ***************************************
[2025-07-28 08:03:54] 2025-07-28 08:03:23,401 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 08:03:54] 2025-07-28 08:03:23,401 | INFO     | ***************************************
[2025-07-28 08:03:54] 2025-07-28 08:03:23,401 | INFO     | 
[2025-07-28 08:03:54] 2025-07-28 08:03:23,403 | INFO     | architecture information:
[2025-07-28 08:03:54] 2025-07-28 08:03:23,407 | INFO     | executing command: cat /etc/os-release
[2025-07-28 08:03:54] 2025-07-28 08:03:23,437 | INFO     | cat /etc/os-release:
[2025-07-28 08:03:54] NAME="CentOS Linux"
[2025-07-28 08:03:54] VERSION="7 (Core)"
[2025-07-28 08:03:54] ID="centos"
[2025-07-28 08:03:54] ID_LIKE="rhel fedora"
[2025-07-28 08:03:54] VERSION_ID="7"
[2025-07-28 08:03:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 08:03:54] ANSI_COLOR="0;31"
[2025-07-28 08:03:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 08:03:54] HOME_URL="https://www.centos.org/"
[2025-07-28 08:03:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 08:03:54] 
[2025-07-28 08:03:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 08:03:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 08:03:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 08:03:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 08:03:54] 
[2025-07-28 08:03:54] 2025-07-28 08:03:23,438 | INFO     | ***************************************
[2025-07-28 08:03:54] 2025-07-28 08:03:23,943 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-07-28 08:03:54] 2025-07-28 08:03:23,974 | INFO     | sufficient remaining disk space (12067012608 B)
[2025-07-28 08:03:54] 2025-07-28 08:03:23,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 08:03:54] 2025-07-28 08:03:23,975 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 08:03:54] 2025-07-28 08:03:23,975 | INFO     | update_server=False
[2025-07-28 08:03:54] 2025-07-28 08:03:23,975 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 08:03:54] 2025-07-28 08:03:23,979 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 08:03:54] 2025-07-28 08:03:24,097 | INFO     | all payload control threads have been joined
[2025-07-28 08:03:54] 2025-07-28 08:03:24,104 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 08:03:54] 2025-07-28 08:03:24,104 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 08:03:54] 2025-07-28 08:03:24,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 08:03:54] 2025-07-28 08:03:24,104 | INFO     | will abort loop
[2025-07-28 08:03:54] 2025-07-28 08:03:24,984 | INFO     | [job] retrieve thread has finished
[2025-07-28 08:03:54] 2025-07-28 08:03:25,044 | INFO     | all data control threads have been joined
[2025-07-28 08:03:54] 2025-07-28 08:03:25,076 | INFO     | [payload] failed_post thread has finished
[2025-07-28 08:03:54] 2025-07-28 08:03:25,106 | INFO     | [payload] control thread has finished
[2025-07-28 08:03:54] 2025-07-28 08:03:25,111 | INFO     | [job] job monitor thread has finished
[2025-07-28 08:03:54] 2025-07-28 08:03:25,133 | INFO     | all job control threads have been joined
[2025-07-28 08:03:54] 2025-07-28 08:03:25,335 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 08:03:54] 2025-07-28 08:03:25,346 | INFO     | [job] validate thread has finished
[2025-07-28 08:03:54] 2025-07-28 08:03:25,435 | INFO     | [payload] validate_post thread has finished
[2025-07-28 08:03:54] 2025-07-28 08:03:25,530 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 08:03:54] 2025-07-28 08:03:25,796 | INFO     | [data] copytool_in thread has finished
[2025-07-28 08:03:54] 2025-07-28 08:03:25,913 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 08:03:54] 2025-07-28 08:03:25,984 | INFO     | [data] copytool_out thread has finished
[2025-07-28 08:03:54] 2025-07-28 08:03:26,049 | INFO     | [data] control thread has finished
[2025-07-28 08:03:54] 2025-07-28 08:03:26,132 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 08:03:54] 2025-07-28 08:03:26,138 | INFO     | [job] control thread has finished
[2025-07-28 08:03:54] 2025-07-28 08:03:26,634 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 08:03:54] 2025-07-28 08:03:26,870 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 08:03:54] 2025-07-28 08:03:27,875 | INFO     | [job] queue monitor thread has finished
[2025-07-28 08:03:54] 2025-07-28 08:03:30,643 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 08:03:54] 2025-07-28 08:03:31,735 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124728052082496)>', '<ExcThread(monitor, started 124727553140480)>']
[2025-07-28 08:03:54] 2025-07-28 08:03:36,760 | INFO     | all workflow threads have been joined
[2025-07-28 08:03:54] 2025-07-28 08:03:36,760 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 08:03:54] 2025-07-28 08:03:36,760 | INFO     | traces error code: 0
[2025-07-28 08:03:54] 2025-07-28 08:03:36,761 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 08:03:54] 2025-07-28 08:03:53,849 | INFO     | PID=4072751 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 08:03:54] 2025-07-28 08:03:53,849 | INFO     | .. there are 4 such processes running
[2025-07-28 08:03:54] 2025-07-28 08:03:53,850 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 08:03:54] 2025-07-28 08:03:53,851 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 08:03:54] 2025-07-28 08:03:53,851 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 08:03:54] 2025-07-28 08:03:53,851 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 08:03:54] 2025-07-28 08:03:53,851 | INFO     | [monitor] control thread has ended
[2025-07-28 08:03:54] 2025-07-28 08:03:53,979 [wrapper] ==== pilot stdout END ====
[2025-07-28 08:03:54] 2025-07-28 08:03:53,982 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 08:03:54] 2025-07-28 08:03:53,985 [wrapper] pilotpid: 4072751
[2025-07-28 08:03:54] 2025-07-28 08:03:53,988 [wrapper] Pilot exit status: 0
[2025-07-28 08:03:54] 2025-07-28 08:03:54,002 [wrapper] pandaids: 6747544583
[2025-07-28 08:03:54] 2025-07-28 08:03:54,036 [wrapper] cleanup supervisor_pilot   54355 4072752
[2025-07-28 08:03:54] 2025-07-28 08:03:54,040 [wrapper] Test setup, not cleaning
[2025-07-28 08:03:54] 2025-07-28 08:03:54,042 [wrapper] apfmon messages muted
[2025-07-28 08:03:54] 2025-07-28 08:03:54,045 [wrapper] ==== wrapper stdout END ====
[2025-07-28 08:03:54] 2025-07-28 08:03:54,048 [wrapper] ==== wrapper stderr END ====
[2025-07-28 08:03:54]  *** Error codes and diagnostics ***
[2025-07-28 08:03:54]     "exeErrorCode": 0,
[2025-07-28 08:03:54]     "exeErrorDiag": "",
[2025-07-28 08:03:54]     "pilotErrorCode": 0,
[2025-07-28 08:03:54]     "pilotErrorDiag": "",
[2025-07-28 08:03:54]  *** Listing of results directory ***
[2025-07-28 08:03:54] total 378096
[2025-07-28 08:03:54] -rw-r--r-- 1 boinc boinc    530466 Jul 27 16:02 pilot3.tar.gz
[2025-07-28 08:03:54] -rw-r--r-- 1 boinc boinc      5112 Jul 27 16:46 queuedata.json
[2025-07-28 08:03:54] -rwx------ 1 boinc boinc     36292 Jul 27 16:46 runpilot2-wrapper.sh
[2025-07-28 08:03:54] -rw-rw-r-- 1 boinc boinc       100 Jul 28 04:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 08:03:54] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 04:20 run_atlas
[2025-07-28 08:03:54] -rw-rw-r-- 1 boinc boinc       105 Jul 28 04:20 job.xml
[2025-07-28 08:03:54] -rw-r--r-- 2 boinc boinc 217893576 Jul 28 04:20 EVNT.45758482._000003.pool.root.1
[2025-07-28 08:03:54] -rw-rw-r-- 1 boinc boinc      9390 Jul 28 04:20 init_data.xml
[2025-07-28 08:03:54] -rw-r--r-- 2 boinc boinc     15095 Jul 28 04:20 start_atlas.sh
[2025-07-28 08:03:54] drwxrwx--x 2 boinc boinc      4096 Jul 28 04:20 shared
[2025-07-28 08:03:54] -rw-r--r-- 2 boinc boinc    542877 Jul 28 04:20 input.tar.gz
[2025-07-28 08:03:54] -rw-rw-r-- 1 boinc boinc         0 Jul 28 04:20 boinc_lockfile
[2025-07-28 08:03:54] -rw-rw-r-- 1 boinc boinc      2559 Jul 28 04:20 pandaJob.out
[2025-07-28 08:03:54] -rw------- 1 boinc boinc    980125 Jul 28 04:20 agis_schedconf.cvmfs.json
[2025-07-28 08:03:54] drwx------ 4 boinc boinc      4096 Jul 28 04:20 pilot3
[2025-07-28 08:03:54] -rw------- 1 boinc boinc 161955400 Jul 28 08:02 HITS.45758484._000059.pool.root.1
[2025-07-28 08:03:54] -rw-rw-r-- 1 boinc boinc       530 Jul 28 08:02 boinc_task_state.xml
[2025-07-28 08:03:54] -rw------- 1 boinc boinc      1026 Jul 28 08:03 memory_monitor_summary.json
[2025-07-28 08:03:54] -rw------- 1 boinc boinc   1593052 Jul 28 08:03 agis_ddmendpoints.agis.ALL.json
[2025-07-28 08:03:54] -rw------- 1 boinc boinc    445836 Jul 28 08:03 log.45758484._000059.job.log.tgz.1
[2025-07-28 08:03:54] -rw------- 1 boinc boinc      7768 Jul 28 08:03 heartbeat.json
[2025-07-28 08:03:54] -rw-rw-r-- 1 boinc boinc      8192 Jul 28 08:03 boinc_mmap_file
[2025-07-28 08:03:54] -rw-rw-r-- 1 boinc boinc        28 Jul 28 08:03 wrapper_checkpoint.txt
[2025-07-28 08:03:54] -rw------- 1 boinc boinc        95 Jul 28 08:03 pilot_heartbeat.json
[2025-07-28 08:03:54] -rw------- 1 boinc boinc       822 Jul 28 08:03 pilotlog.txt
[2025-07-28 08:03:54] -rw------- 1 boinc boinc   1277846 Jul 28 08:03 log.45758484._000059.job.log.1
[2025-07-28 08:03:54] -rw------- 1 boinc boinc       357 Jul 28 08:03 output.list
[2025-07-28 08:03:54] -rw-rw-r-- 1 boinc boinc       620 Jul 28 08:03 runtime_log
[2025-07-28 08:03:54] -rw------- 1 boinc boinc   1740800 Jul 28 08:03 result.tar.gz
[2025-07-28 08:03:54] -rw-rw-r-- 1 boinc boinc      8970 Jul 28 08:03 runtime_log.err
[2025-07-28 08:03:54] -rw------- 1 boinc boinc       657 Jul 28 08:03 G0LODmahJ07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmurVLDme3ryVm.diag
[2025-07-28 08:03:54] -rw-rw-r-- 1 boinc boinc     20684 Jul 28 08:03 stderr.txt
[2025-07-28 08:03:54] HITS file was successfully produced:
[2025-07-28 08:03:54] -rw------- 1 boinc boinc 161955400 Jul 28 08:02 shared/HITS.pool.root.1
[2025-07-28 08:03:54]  *** Contents of shared directory: ***
[2025-07-28 08:03:54] total 373204
[2025-07-28 08:03:54] -rw-r--r-- 2 boinc boinc 217893576 Jul 28 04:20 ATLAS.root_0
[2025-07-28 08:03:54] -rw-r--r-- 2 boinc boinc     15095 Jul 28 04:20 start_atlas.sh
[2025-07-28 08:03:54] -rw-r--r-- 2 boinc boinc    542877 Jul 28 04:20 input.tar.gz
[2025-07-28 08:03:54] -rw------- 1 boinc boinc 161955400 Jul 28 08:02 HITS.pool.root.1
[2025-07-28 08:03:54] -rw------- 1 boinc boinc   1740800 Jul 28 08:03 result.tar.gz
08:03:55 (4068984): run_atlas exited; CPU time 94896.530428
08:03:55 (4068984): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN