Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
02:51:11 (4003088): wrapper (7.7.26015): starting
02:51:11 (4003088): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 02:51:11] Arguments: --nthreads 12
[2025-07-28 02:51:11] Threads: 12
[2025-07-28 02:51:11] Checking for CVMFS
[2025-07-28 02:51:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 02:51:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 02:51:11] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 02:51:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 02:51:12] 2.13.0.0 30494 4624 52512 148832 2 188 2181963 4096000 2733 130560 0 10717371 99.997 163186 253 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-28 02:51:12] CVMFS is ok
[2025-07-28 02:51:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 02:51:12] Checking for apptainer binary...
[2025-07-28 02:51:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 02:51:12] Running /usr/bin/apptainer --version
[2025-07-28 02:51:12] apptainer version 1.4.1
[2025-07-28 02:51:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 02:51:12] dualxeon1
[2025-07-28 02:51:12] apptainer works
[2025-07-28 02:51:12] Set ATHENA_PROC_NUMBER=12
[2025-07-28 02:51:12] Set ATHENA_CORE_NUMBER=12
[2025-07-28 02:51:12] Starting ATLAS job with PandaID=6747626584
[2025-07-28 02:51:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 05:05:44]  *** The last 200 lines of the pilot log: ***
[2025-07-28 05:05:44] 2025-07-28 05:05:12,350 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 05:05:44] 2025-07-28 05:05:12,353 | INFO     | fitting pss+swap vs Time
[2025-07-28 05:05:44] 2025-07-28 05:05:12,353 | INFO     | sum of square deviations: 697054930.0
[2025-07-28 05:05:44] 2025-07-28 05:05:12,357 | INFO     | sum of deviations: 17539734857.0
[2025-07-28 05:05:44] 2025-07-28 05:05:12,357 | INFO     | mean x: 1753675102.0
[2025-07-28 05:05:44] 2025-07-28 05:05:12,357 | INFO     | mean y: 2612453.5496183205
[2025-07-28 05:05:44] 2025-07-28 05:05:12,358 | INFO     | -- intersect: -44124464180.71567
[2025-07-28 05:05:44] 2025-07-28 05:05:12,358 | INFO     | intersect: -44124464180.71567
[2025-07-28 05:05:44] 2025-07-28 05:05:12,358 | INFO     | chi2: 2.745298391992532
[2025-07-28 05:05:44] 2025-07-28 05:05:12,358 | INFO     | sum of square deviations: 620244187.5
[2025-07-28 05:05:44] 2025-07-28 05:05:12,359 | INFO     | sum of deviations: 26086764100.500004
[2025-07-28 05:05:44] 2025-07-28 05:05:12,359 | INFO     | mean x: 1753674949.5
[2025-07-28 05:05:44] 2025-07-28 05:05:12,359 | INFO     | mean y: 2628836.8492063493
[2025-07-28 05:05:44] 2025-07-28 05:05:12,360 | INFO     | -- intersect: -73754942194.90312
[2025-07-28 05:05:44] 2025-07-28 05:05:12,360 | INFO     | intersect: -73754942194.90312
[2025-07-28 05:05:44] 2025-07-28 05:05:12,360 | INFO     | chi2: 1.9349826926177034
[2025-07-28 05:05:44] 2025-07-28 05:05:12,360 | INFO     | current chi2=1.9349826926177034 (change=29.516489054098887 %)
[2025-07-28 05:05:44] 2025-07-28 05:05:12,360 | INFO     | sum of square deviations: 549294020.0
[2025-07-28 05:05:44] 2025-07-28 05:05:12,364 | INFO     | sum of deviations: 24911698378.0
[2025-07-28 05:05:44] 2025-07-28 05:05:12,364 | INFO     | mean x: 1753674797.0
[2025-07-28 05:05:44] 2025-07-28 05:05:12,364 | INFO     | mean y: 2626309.8099173554
[2025-07-28 05:05:44] 2025-07-28 05:05:12,365 | INFO     | -- intersect: -79530403370.65953
[2025-07-28 05:05:44] 2025-07-28 05:05:12,365 | INFO     | intersect: -79530403370.65953
[2025-07-28 05:05:44] 2025-07-28 05:05:12,365 | INFO     | chi2: 1.937782922209666
[2025-07-28 05:05:44] 2025-07-28 05:05:12,365 | INFO     | current chi2=1.937782922209666 (change=-0.14471600199040813 %)
[2025-07-28 05:05:44] 2025-07-28 05:05:12,365 | INFO     | right removable region: 120
[2025-07-28 05:05:44] 2025-07-28 05:05:12,366 | INFO     | sum of square deviations: 620244187.5
[2025-07-28 05:05:44] 2025-07-28 05:05:12,366 | INFO     | sum of deviations: -9299190445.000002
[2025-07-28 05:05:44] 2025-07-28 05:05:12,366 | INFO     | mean x: 1753675254.5
[2025-07-28 05:05:44] 2025-07-28 05:05:12,371 | INFO     | mean y: 2665136.4285714286
[2025-07-28 05:05:44] 2025-07-28 05:05:12,371 | INFO     | -- intersect: 26295148804.853672
[2025-07-28 05:05:44] 2025-07-28 05:05:12,371 | INFO     | intersect: 26295148804.853672
[2025-07-28 05:05:44] 2025-07-28 05:05:12,371 | INFO     | chi2: 0.9479894667881835
[2025-07-28 05:05:44] 2025-07-28 05:05:12,371 | INFO     | current chi2=0.9479894667881835 (change=65.46861829106545 %)
[2025-07-28 05:05:44] 2025-07-28 05:05:12,372 | INFO     | sum of square deviations: 549294020.0
[2025-07-28 05:05:44] 2025-07-28 05:05:12,372 | INFO     | sum of deviations: -12731017749.0
[2025-07-28 05:05:44] 2025-07-28 05:05:12,373 | INFO     | mean x: 1753675407.0
[2025-07-28 05:05:44] 2025-07-28 05:05:12,373 | INFO     | mean y: 2672334.652892562
[2025-07-28 05:05:44] 2025-07-28 05:05:12,373 | INFO     | -- intersect: 40647703810.695175
[2025-07-28 05:05:44] 2025-07-28 05:05:12,373 | INFO     | intersect: 40647703810.695175
[2025-07-28 05:05:44] 2025-07-28 05:05:12,373 | INFO     | chi2: 0.8855634621993234
[2025-07-28 05:05:44] 2025-07-28 05:05:12,373 | INFO     | current chi2=0.8855634621993234 (change=6.585094747978721 %)
[2025-07-28 05:05:44] 2025-07-28 05:05:12,374 | INFO     | left removable region: 20
[2025-07-28 05:05:44] 2025-07-28 05:05:12,374 | INFO     | sum of square deviations: 310052325.0
[2025-07-28 05:05:44] 2025-07-28 05:05:12,374 | INFO     | sum of deviations: 809191199.5
[2025-07-28 05:05:44] 2025-07-28 05:05:12,374 | INFO     | mean x: 1753675376.5
[2025-07-28 05:05:44] 2025-07-28 05:05:12,375 | INFO     | mean y: 2679475.65
[2025-07-28 05:05:44] 2025-07-28 05:05:12,375 | INFO     | -- intersect: -4574156648.522426
[2025-07-28 05:05:44] 2025-07-28 05:05:12,375 | INFO     | intersect: -4574156648.522426
[2025-07-28 05:05:44] 2025-07-28 05:05:12,375 | INFO     | chi2: 0.010157198050473243
[2025-07-28 05:05:44] 2025-07-28 05:05:12,375 | INFO     | -- intersect: -4574156648.522426
[2025-07-28 05:05:44] 2025-07-28 05:05:12,382 | INFO     | current memory leak: 2.61 B/s (using 100 data points, chi2=0.01)
[2025-07-28 05:05:44] 2025-07-28 05:05:12,383 | INFO     | could have reported an average CPU frequency of 2593 MHz (8 samples)
[2025-07-28 05:05:44] 2025-07-28 05:05:12,383 | INFO     | ..............................
[2025-07-28 05:05:44] 2025-07-28 05:05:12,383 | INFO     | . Timing measurements:
[2025-07-28 05:05:44] 2025-07-28 05:05:12,383 | INFO     | . get job = 0 s
[2025-07-28 05:05:44] 2025-07-28 05:05:12,383 | INFO     | . initial setup = 2 s
[2025-07-28 05:05:44] 2025-07-28 05:05:12,384 | INFO     | . payload setup = 14 s
[2025-07-28 05:05:44] 2025-07-28 05:05:12,384 | INFO     | . stage-in = 0 s
[2025-07-28 05:05:44] 2025-07-28 05:05:12,384 | INFO     | . payload execution = 7964 s
[2025-07-28 05:05:44] 2025-07-28 05:05:12,384 | INFO     | . stage-out = 1 s
[2025-07-28 05:05:44] 2025-07-28 05:05:12,384 | INFO     | . log creation = 0 s
[2025-07-28 05:05:44] 2025-07-28 05:05:12,384 | INFO     | ..............................
[2025-07-28 05:05:44] 2025-07-28 05:05:12,849 | INFO     | 
[2025-07-28 05:05:44] 2025-07-28 05:05:12,849 | INFO     | job summary report
[2025-07-28 05:05:44] 2025-07-28 05:05:12,849 | INFO     | --------------------------------------------------
[2025-07-28 05:05:44] 2025-07-28 05:05:12,849 | INFO     | PanDA job id: 6747626584
[2025-07-28 05:05:44] 2025-07-28 05:05:12,849 | INFO     | task id: 45743349
[2025-07-28 05:05:44] 2025-07-28 05:05:12,849 | INFO     | errors: (none)
[2025-07-28 05:05:44] 2025-07-28 05:05:12,849 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 05:05:44] 2025-07-28 05:05:12,850 | INFO     | pilot state: finished 
[2025-07-28 05:05:44] 2025-07-28 05:05:12,850 | INFO     | transexitcode: 0
[2025-07-28 05:05:44] 2025-07-28 05:05:12,850 | INFO     | exeerrorcode: 0
[2025-07-28 05:05:44] 2025-07-28 05:05:12,850 | INFO     | exeerrordiag: 
[2025-07-28 05:05:44] 2025-07-28 05:05:12,850 | INFO     | exitcode: 0
[2025-07-28 05:05:44] 2025-07-28 05:05:12,850 | INFO     | exitmsg: OK
[2025-07-28 05:05:44] 2025-07-28 05:05:12,850 | INFO     | cpuconsumptiontime: 64125 s
[2025-07-28 05:05:44] 2025-07-28 05:05:12,850 | INFO     | nevents: 400
[2025-07-28 05:05:44] 2025-07-28 05:05:12,850 | INFO     | neventsw: 0
[2025-07-28 05:05:44] 2025-07-28 05:05:12,851 | INFO     | pid: 4013559
[2025-07-28 05:05:44] 2025-07-28 05:05:12,851 | INFO     | pgrp: 4013559
[2025-07-28 05:05:44] 2025-07-28 05:05:12,851 | INFO     | corecount: 12
[2025-07-28 05:05:44] 2025-07-28 05:05:12,851 | INFO     | event service: False
[2025-07-28 05:05:44] 2025-07-28 05:05:12,851 | INFO     | sizes: {0: 2397378, 1: 2397520, 10: 2397782, 12: 2397810, 7983: 2425428, 7985: 2434472, 7988: 2434656, 7999: 2434850}
[2025-07-28 05:05:44] 2025-07-28 05:05:12,851 | INFO     | --------------------------------------------------
[2025-07-28 05:05:44] 2025-07-28 05:05:12,851 | INFO     | 
[2025-07-28 05:05:44] 2025-07-28 05:05:12,851 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-07-28 05:05:44] 2025-07-28 05:05:12,880 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,881 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,881 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,881 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,881 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,881 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,881 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,882 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,882 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,882 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,882 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,882 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,882 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,882 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,882 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,883 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,883 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,883 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 05:05:44] 2025-07-28 05:05:12,883 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,883 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 05:05:44] 2025-07-28 05:05:12,883 | INFO     | job 6747626584 has completed (purged errors)
[2025-07-28 05:05:44] 2025-07-28 05:05:12,883 | INFO     | overall cleanup function is called
[2025-07-28 05:05:44] 2025-07-28 05:05:13,901 | INFO     | --- collectZombieJob: --- 10, [4013559]
[2025-07-28 05:05:44] 2025-07-28 05:05:13,901 | INFO     | zombie collector waiting for pid 4013559
[2025-07-28 05:05:44] 2025-07-28 05:05:13,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 05:05:44] 2025-07-28 05:05:13,901 | INFO     | collected zombie processes
[2025-07-28 05:05:44] 2025-07-28 05:05:13,901 | INFO     | will attempt to kill all subprocesses of pid=4013559
[2025-07-28 05:05:44] 2025-07-28 05:05:14,228 | INFO     | process IDs to be killed: [4013559] (in reverse order)
[2025-07-28 05:05:44] 2025-07-28 05:05:14,328 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 05:05:44] 2025-07-28 05:05:14,329 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 05:05:44] 2025-07-28 05:05:14,335 | INFO     | did not find any defunct processes belonging to 4013559
[2025-07-28 05:05:44] 2025-07-28 05:05:14,343 | INFO     | did not find any defunct processes belonging to 4013559
[2025-07-28 05:05:44] 2025-07-28 05:05:14,343 | INFO     | ready for new job
[2025-07-28 05:05:44] 2025-07-28 05:05:14,344 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 05:05:44] 2025-07-28 05:05:14,352 | INFO     | ***************************************
[2025-07-28 05:05:44] 2025-07-28 05:05:14,352 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 05:05:44] 2025-07-28 05:05:14,353 | INFO     | ***************************************
[2025-07-28 05:05:44] 2025-07-28 05:05:14,353 | INFO     | 
[2025-07-28 05:05:44] 2025-07-28 05:05:14,355 | INFO     | architecture information:
[2025-07-28 05:05:44] 2025-07-28 05:05:14,355 | INFO     | executing command: cat /etc/os-release
[2025-07-28 05:05:44] 2025-07-28 05:05:14,385 | INFO     | cat /etc/os-release:
[2025-07-28 05:05:44] NAME="CentOS Linux"
[2025-07-28 05:05:44] VERSION="7 (Core)"
[2025-07-28 05:05:44] ID="centos"
[2025-07-28 05:05:44] ID_LIKE="rhel fedora"
[2025-07-28 05:05:44] VERSION_ID="7"
[2025-07-28 05:05:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 05:05:44] ANSI_COLOR="0;31"
[2025-07-28 05:05:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 05:05:44] HOME_URL="https://www.centos.org/"
[2025-07-28 05:05:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 05:05:44] 
[2025-07-28 05:05:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 05:05:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 05:05:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 05:05:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 05:05:44] 
[2025-07-28 05:05:44] 2025-07-28 05:05:14,386 | INFO     | ***************************************
[2025-07-28 05:05:44] 2025-07-28 05:05:14,888 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-07-28 05:05:44] 2025-07-28 05:05:14,919 | INFO     | sufficient remaining disk space (11266949120 B)
[2025-07-28 05:05:44] 2025-07-28 05:05:14,919 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 05:05:44] 2025-07-28 05:05:14,920 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 05:05:44] 2025-07-28 05:05:14,920 | INFO     | update_server=False
[2025-07-28 05:05:44] 2025-07-28 05:05:14,920 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 05:05:44] 2025-07-28 05:05:14,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 05:05:44] 2025-07-28 05:05:15,271 | INFO     | all data control threads have been joined
[2025-07-28 05:05:44] 2025-07-28 05:05:15,319 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 05:05:44] 2025-07-28 05:05:15,319 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 05:05:44] 2025-07-28 05:05:15,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 05:05:44] 2025-07-28 05:05:15,319 | INFO     | will abort loop
[2025-07-28 05:05:44] 2025-07-28 05:05:15,387 | INFO     | all job control threads have been joined
[2025-07-28 05:05:44] 2025-07-28 05:05:15,925 | INFO     | [job] retrieve thread has finished
[2025-07-28 05:05:44] 2025-07-28 05:05:16,001 | INFO     | all payload control threads have been joined
[2025-07-28 05:05:44] 2025-07-28 05:05:16,279 | INFO     | [data] control thread has finished
[2025-07-28 05:05:44] 2025-07-28 05:05:16,324 | INFO     | [job] job monitor thread has finished
[2025-07-28 05:05:44] 2025-07-28 05:05:16,328 | INFO     | [data] copytool_in thread has finished
[2025-07-28 05:05:44] 2025-07-28 05:05:16,346 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 05:05:44] 2025-07-28 05:05:16,392 | INFO     | [job] control thread has finished
[2025-07-28 05:05:44] 2025-07-28 05:05:16,435 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 05:05:44] 2025-07-28 05:05:16,925 | INFO     | [data] copytool_out thread has finished
[2025-07-28 05:05:44] 2025-07-28 05:05:17,000 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 05:05:44] 2025-07-28 05:05:17,005 | INFO     | [payload] failed_post thread has finished
[2025-07-28 05:05:44] 2025-07-28 05:05:17,005 | INFO     | [payload] validate_post thread has finished
[2025-07-28 05:05:44] 2025-07-28 05:05:17,006 | INFO     | [payload] control thread has finished
[2025-07-28 05:05:44] 2025-07-28 05:05:17,080 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 05:05:44] 2025-07-28 05:05:17,418 | INFO     | [job] validate thread has finished
[2025-07-28 05:05:44] 2025-07-28 05:05:17,581 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 05:05:44] 2025-07-28 05:05:18,586 | INFO     | [job] queue monitor thread has finished
[2025-07-28 05:05:44] 2025-07-28 05:05:21,005 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 05:05:44] 2025-07-28 05:05:25,437 | INFO     | job.realtimelogging is not enabled
[2025-07-28 05:05:44] 2025-07-28 05:05:26,442 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 05:05:44] 2025-07-28 05:05:28,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127604411086656)>', '<ExcThread(monitor, started 127603545470720)>']
[2025-07-28 05:05:44] 2025-07-28 05:05:33,388 | INFO     | all workflow threads have been joined
[2025-07-28 05:05:44] 2025-07-28 05:05:33,388 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 05:05:44] 2025-07-28 05:05:33,388 | INFO     | traces error code: 0
[2025-07-28 05:05:44] 2025-07-28 05:05:33,388 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 05:05:44] 2025-07-28 05:05:44,462 | INFO     | PID=4006856 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 05:05:44] 2025-07-28 05:05:44,463 | INFO     | .. there are 4 such processes running
[2025-07-28 05:05:44] 2025-07-28 05:05:44,463 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 05:05:44] 2025-07-28 05:05:44,463 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 05:05:44] 2025-07-28 05:05:44,463 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 05:05:44] 2025-07-28 05:05:44,463 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 05:05:44] 2025-07-28 05:05:44,463 | INFO     | [monitor] control thread has ended
[2025-07-28 05:05:44] 2025-07-28 05:05:44,605 [wrapper] ==== pilot stdout END ====
[2025-07-28 05:05:44] 2025-07-28 05:05:44,612 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 05:05:44] 2025-07-28 05:05:44,618 [wrapper] pilotpid: 4006856
[2025-07-28 05:05:44] 2025-07-28 05:05:44,623 [wrapper] Pilot exit status: 0
[2025-07-28 05:05:44] 2025-07-28 05:05:44,645 [wrapper] pandaids: 6747626584
[2025-07-28 05:05:44] 2025-07-28 05:05:44,717 [wrapper] cleanup supervisor_pilot 4114989 4006857
[2025-07-28 05:05:44] 2025-07-28 05:05:44,724 [wrapper] Test setup, not cleaning
[2025-07-28 05:05:44] 2025-07-28 05:05:44,730 [wrapper] apfmon messages muted
[2025-07-28 05:05:44] 2025-07-28 05:05:44,736 [wrapper] ==== wrapper stdout END ====
[2025-07-28 05:05:44] 2025-07-28 05:05:44,743 [wrapper] ==== wrapper stderr END ====
[2025-07-28 05:05:44]  *** Error codes and diagnostics ***
[2025-07-28 05:05:44]     "exeErrorCode": 0,
[2025-07-28 05:05:44]     "exeErrorDiag": "",
[2025-07-28 05:05:44]     "pilotErrorCode": 0,
[2025-07-28 05:05:44]     "pilotErrorDiag": "",
[2025-07-28 05:05:44]  *** Listing of results directory ***
[2025-07-28 05:05:44] total 353956
[2025-07-28 05:05:44] -rw-r--r-- 1 boinc boinc    530466 Jul 27 19:12 pilot3.tar.gz
[2025-07-28 05:05:44] -rwx------ 1 boinc boinc     36292 Jul 27 19:25 runpilot2-wrapper.sh
[2025-07-28 05:05:44] -rw-r--r-- 1 boinc boinc      5112 Jul 27 19:25 queuedata.json
[2025-07-28 05:05:44] -rw-rw-r-- 1 boinc boinc       100 Jul 28 02:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 05:05:44] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 02:51 run_atlas
[2025-07-28 05:05:44] -rw-rw-r-- 1 boinc boinc       105 Jul 28 02:51 job.xml
[2025-07-28 05:05:44] -rw-r--r-- 2 boinc boinc 142454651 Jul 28 02:51 EVNT.45743347._002963.pool.root.1
[2025-07-28 05:05:44] -rw-rw-r-- 1 boinc boinc      9390 Jul 28 02:51 init_data.xml
[2025-07-28 05:05:44] -rw-r--r-- 2 boinc boinc     15095 Jul 28 02:51 start_atlas.sh
[2025-07-28 05:05:44] drwxrwx--x 2 boinc boinc      4096 Jul 28 02:51 shared
[2025-07-28 05:05:44] -rw-r--r-- 2 boinc boinc    542880 Jul 28 02:51 input.tar.gz
[2025-07-28 05:05:44] -rw-rw-r-- 1 boinc boinc         0 Jul 28 02:51 boinc_lockfile
[2025-07-28 05:05:44] -rw-rw-r-- 1 boinc boinc      2560 Jul 28 02:51 pandaJob.out
[2025-07-28 05:05:44] -rw------- 1 boinc boinc    980125 Jul 28 02:51 agis_schedconf.cvmfs.json
[2025-07-28 05:05:44] -rw------- 1 boinc boinc   1593052 Jul 28 02:51 agis_ddmendpoints.agis.ALL.json
[2025-07-28 05:05:44] drwx------ 4 boinc boinc      4096 Jul 28 02:51 pilot3
[2025-07-28 05:05:44] -rw------- 1 boinc boinc 213781853 Jul 28 05:04 HITS.45743349._054645.pool.root.1
[2025-07-28 05:05:44] -rw-rw-r-- 1 boinc boinc       530 Jul 28 05:04 boinc_task_state.xml
[2025-07-28 05:05:44] -rw------- 1 boinc boinc      1024 Jul 28 05:04 memory_monitor_summary.json
[2025-07-28 05:05:44] -rw------- 1 boinc boinc    382694 Jul 28 05:04 log.45743349._054645.job.log.tgz.1
[2025-07-28 05:05:44] -rw------- 1 boinc boinc        95 Jul 28 05:05 pilot_heartbeat.json
[2025-07-28 05:05:44] -rw------- 1 boinc boinc      7769 Jul 28 05:05 heartbeat.json
[2025-07-28 05:05:44] -rw-rw-r-- 1 boinc boinc      8192 Jul 28 05:05 boinc_mmap_file
[2025-07-28 05:05:44] -rw-rw-r-- 1 boinc boinc        27 Jul 28 05:05 wrapper_checkpoint.txt
[2025-07-28 05:05:44] -rw------- 1 boinc boinc       822 Jul 28 05:05 pilotlog.txt
[2025-07-28 05:05:44] -rw------- 1 boinc boinc    783036 Jul 28 05:05 log.45743349._054645.job.log.1
[2025-07-28 05:05:44] -rw------- 1 boinc boinc       357 Jul 28 05:05 output.list
[2025-07-28 05:05:44] -rw-rw-r-- 1 boinc boinc       620 Jul 28 05:05 runtime_log
[2025-07-28 05:05:44] -rw------- 1 boinc boinc   1187840 Jul 28 05:05 result.tar.gz
[2025-07-28 05:05:44] -rw-rw-r-- 1 boinc boinc      8969 Jul 28 05:05 runtime_log.err
[2025-07-28 05:05:44] -rw------- 1 boinc boinc       653 Jul 28 05:05 FUiNDmyAM07n9Rq4apOajLDm4fhM0noT9bVof3QYDmV12KDml8iScn.diag
[2025-07-28 05:05:44] -rw-rw-r-- 1 boinc boinc     20658 Jul 28 05:05 stderr.txt
[2025-07-28 05:05:44] HITS file was successfully produced:
[2025-07-28 05:05:44] -rw------- 1 boinc boinc 213781853 Jul 28 05:04 shared/HITS.pool.root.1
[2025-07-28 05:05:44]  *** Contents of shared directory: ***
[2025-07-28 05:05:44] total 349604
[2025-07-28 05:05:44] -rw-r--r-- 2 boinc boinc 142454651 Jul 28 02:51 ATLAS.root_0
[2025-07-28 05:05:44] -rw-r--r-- 2 boinc boinc     15095 Jul 28 02:51 start_atlas.sh
[2025-07-28 05:05:44] -rw-r--r-- 2 boinc boinc    542880 Jul 28 02:51 input.tar.gz
[2025-07-28 05:05:44] -rw------- 1 boinc boinc 213781853 Jul 28 05:04 HITS.pool.root.1
[2025-07-28 05:05:44] -rw------- 1 boinc boinc   1187840 Jul 28 05:05 result.tar.gz
05:05:46 (4003088): run_atlas exited; CPU time 64229.666000
05:05:46 (4003088): called boinc_finish(0)

</stderr_txt>
]]>

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