Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:08:00 (2305929): wrapper (7.7.26015): starting
12:08:00 (2305929): wrapper: running run_atlas (--nthreads 3)
[2025-07-28 12:08:00] Arguments: --nthreads 3
[2025-07-28 12:08:00] Threads: 3
[2025-07-28 12:08:00] Checking for CVMFS
[2025-07-28 12:08:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 12:08:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 12:08:00] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 12:08:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 12:08:01] 2.9.2.0 752881 5505 83384 148844 4 1 35896290 36864001 0 130560 0 4123098 99.990 192277 2284 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 12:08:01] CVMFS is ok
[2025-07-28 12:08:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 12:08:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 12:08:01] Further information can be found at the LHC@home message board.
[2025-07-28 12:08:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 12:08:01] Checking for apptainer binary...
[2025-07-28 12:08:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 12:08:01] Running /usr/bin/apptainer --version
[2025-07-28 12:08:01] apptainer version 1.4.1-1.1
[2025-07-28 12:08:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 12:08:01] thA305b
[2025-07-28 12:08:01] apptainer works
[2025-07-28 12:08:01] Set ATHENA_PROC_NUMBER=3
[2025-07-28 12:08:01] Set ATHENA_CORE_NUMBER=3
[2025-07-28 12:08:01] Starting ATLAS job with PandaID=6747626553
[2025-07-28 12:08:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 13:45:17]  *** The last 200 lines of the pilot log: ***
[2025-07-28 13:45:17]  is_altstaged=None
[2025-07-28 13:45:17]  is_tar=False
[2025-07-28 13:45:17]  lfn=log.45743349._054614.job.log.tgz.1
[2025-07-28 13:45:17]  mtime=0
[2025-07-28 13:45:17]  protocol_id=None
[2025-07-28 13:45:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 13:45:17]  replicas=None
[2025-07-28 13:45:17]  scope=mc23_13p6TeV
[2025-07-28 13:45:17]  status=None
[2025-07-28 13:45:17]  status_code=0
[2025-07-28 13:45:17]  storage_token=
[2025-07-28 13:45:17]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6747626553/log.45743349._054614.job.log.tgz.1
[2025-07-28 13:45:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/f4/log.45743349._054614.job.log.tgz.1
[2025-07-28 13:45:17]  workdir=None
[2025-07-28 13:45:17] ]
[2025-07-28 13:45:17] 2025-07-28 11:44:43,567 | INFO     | transferring file log.45743349._054614.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6747626553/log.45743349._054614.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 13:45:17] 2025-07-28 11:44:43,567 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6747626553/log.45743349._054614.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0546
[2025-07-28 13:45:17] 2025-07-28 11:44:43,579 | INFO     | adding to output.list: log.45743349._054614.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/f4/log.45743349._054614.job.log.tg
[2025-07-28 13:45:17] 2025-07-28 11:44:43,579 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 13:45:17] 2025-07-28 11:44:43,579 | INFO     | summary of transferred files:
[2025-07-28 13:45:17] 2025-07-28 11:44:43,579 | INFO     |  -- lfn=log.45743349._054614.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 13:45:17] 2025-07-28 11:44:43,579 | INFO     | stage-out finished correctly
[2025-07-28 13:45:17] 2025-07-28 11:44:43,609 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 13:45:17] 2025-07-28 11:44:43,724 | INFO     | job 6747626553 has state=finished
[2025-07-28 13:45:17] 2025-07-28 11:44:43,724 | INFO     | preparing for final server update for job 6747626553 in state='finished'
[2025-07-28 13:45:17] 2025-07-28 11:44:43,725 | INFO     | this job has now completed (state=finished)
[2025-07-28 13:45:17] 2025-07-28 11:44:43,725 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 13:45:17] 2025-07-28 11:44:43,725 | INFO     | log transfer has been attempted: DONE
[2025-07-28 13:45:17] 2025-07-28 11:44:43,725 | INFO     | job 6747626553 has finished - writing final server update
[2025-07-28 13:45:17] 2025-07-28 11:44:43,725 | INFO     | total number of processed events: 400 (read)
[2025-07-28 13:45:17] 2025-07-28 11:44:43,726 | INFO     | executing command: lscpu
[2025-07-28 13:45:17] 2025-07-28 11:44:43,740 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 13:45:17] 2025-07-28 11:44:45,867 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 13:45:17] 2025-07-28 11:44:45,868 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3816.1659166666673
[2025-07-28 13:45:17] 2025-07-28 11:44:45,869 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747626553/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 13:45:17] 2025-07-28 11:44:45,869 | INFO     | extracted standard info from prmon json
[2025-07-28 13:45:17] 2025-07-28 11:44:45,869 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 13:45:17] 2025-07-28 11:44:45,869 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 13:45:17] 2025-07-28 11:44:45,870 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 13:45:17] 2025-07-28 11:44:45,870 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 13:45:17] 2025-07-28 11:44:45,870 | INFO     | fitting pss+swap vs Time
[2025-07-28 13:45:17] 2025-07-28 11:44:45,870 | INFO     | sum of square deviations: 211285822.0
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | sum of deviations: -902482159.5000004
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | mean x: 1753700263.5
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | mean y: 2373728.534090909
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | -- intersect: 7493094998.602083
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | intersect: 7493094998.602083
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | chi2: 0.056805778829094176
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | -- intersect: 7493094998.602083
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | current memory leak: -4.27 B/s (using 88 data points, chi2=0.06)
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | could have reported an average CPU frequency of 3888 MHz (7 samples)
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | ..............................
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | . Timing measurements:
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | . get job = 0 s
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | . initial setup = 1 s
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | . payload setup = 3 s
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | . stage-in = 0 s
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | . payload execution = 5777 s
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | . stage-out = 0 s
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | . log creation = 0 s
[2025-07-28 13:45:17] 2025-07-28 11:44:45,871 | INFO     | ..............................
[2025-07-28 13:45:17] 2025-07-28 11:44:46,109 | INFO     | 
[2025-07-28 13:45:17] 2025-07-28 11:44:46,109 | INFO     | job summary report
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | --------------------------------------------------
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | PanDA job id: 6747626553
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | task id: 45743349
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | errors: (none)
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | pilot state: finished 
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | transexitcode: 0
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | exeerrorcode: 0
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | exeerrordiag: 
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | exitcode: 0
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | exitmsg: OK
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | cpuconsumptiontime: 16560 s
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | nevents: 400
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | neventsw: 0
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | pid: 2316053
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | pgrp: 2316053
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | corecount: 3
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | event service: False
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | sizes: {0: 2397472, 2: 2397734, 11: 2397762, 5783: 2424594, 5784: 2433653, 5787: 2433791}
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | --------------------------------------------------
[2025-07-28 13:45:17] 2025-07-28 11:44:46,110 | INFO     | 
[2025-07-28 13:45:17] 2025-07-28 11:44:46,111 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 13:45:17] 2025-07-28 11:44:46,126 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,127 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 13:45:17] 2025-07-28 11:44:46,127 | INFO     | job 6747626553 has completed (purged errors)
[2025-07-28 13:45:17] 2025-07-28 11:44:46,127 | INFO     | overall cleanup function is called
[2025-07-28 13:45:17] 2025-07-28 11:44:47,133 | INFO     | --- collectZombieJob: --- 10, [2316053]
[2025-07-28 13:45:17] 2025-07-28 11:44:47,133 | INFO     | zombie collector waiting for pid 2316053
[2025-07-28 13:45:17] 2025-07-28 11:44:47,133 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 13:45:17] 2025-07-28 11:44:47,134 | INFO     | collected zombie processes
[2025-07-28 13:45:17] 2025-07-28 11:44:47,134 | INFO     | will attempt to kill all subprocesses of pid=2316053
[2025-07-28 13:45:17] 2025-07-28 11:44:47,178 | INFO     | process IDs to be killed: [2316053] (in reverse order)
[2025-07-28 13:45:17] 2025-07-28 11:44:47,202 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 13:45:17] 2025-07-28 11:44:47,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 13:45:17] 2025-07-28 11:44:47,204 | INFO     | did not find any defunct processes belonging to 2316053
[2025-07-28 13:45:17] 2025-07-28 11:44:47,205 | INFO     | did not find any defunct processes belonging to 2316053
[2025-07-28 13:45:17] 2025-07-28 11:44:47,205 | INFO     | ready for new job
[2025-07-28 13:45:17] 2025-07-28 11:44:47,205 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 13:45:17] 2025-07-28 11:44:47,206 | INFO     | ***************************************
[2025-07-28 13:45:17] 2025-07-28 11:44:47,206 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 13:45:17] 2025-07-28 11:44:47,206 | INFO     | ***************************************
[2025-07-28 13:45:17] 2025-07-28 11:44:47,206 | INFO     | 
[2025-07-28 13:45:17] 2025-07-28 11:44:47,206 | INFO     | architecture information:
[2025-07-28 13:45:17] 2025-07-28 11:44:47,206 | INFO     | executing command: cat /etc/os-release
[2025-07-28 13:45:17] 2025-07-28 11:44:47,214 | INFO     | cat /etc/os-release:
[2025-07-28 13:45:17] NAME="CentOS Linux"
[2025-07-28 13:45:17] VERSION="7 (Core)"
[2025-07-28 13:45:17] ID="centos"
[2025-07-28 13:45:17] ID_LIKE="rhel fedora"
[2025-07-28 13:45:17] VERSION_ID="7"
[2025-07-28 13:45:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 13:45:17] ANSI_COLOR="0;31"
[2025-07-28 13:45:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 13:45:17] HOME_URL="https://www.centos.org/"
[2025-07-28 13:45:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 13:45:17] 
[2025-07-28 13:45:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 13:45:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 13:45:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 13:45:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 13:45:17] 
[2025-07-28 13:45:17] 2025-07-28 11:44:47,214 | INFO     | ***************************************
[2025-07-28 13:45:17] 2025-07-28 11:44:47,443 | WARNING  | process 2316053 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 13:45:17] 2025-07-28 11:44:47,473 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 13:45:17] 2025-07-28 11:44:47,513 | INFO     | number of running child processes to parent process 2316053: 1
[2025-07-28 13:45:17] 2025-07-28 11:44:47,513 | INFO     | maximum number of monitored processes: 6
[2025-07-28 13:45:17] 2025-07-28 11:44:47,513 | INFO     | aborting job monitoring since job object (job id=6747626553) has expired
[2025-07-28 13:45:17] 2025-07-28 11:44:47,718 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 13:45:17] 2025-07-28 11:44:47,730 | INFO     | sufficient remaining disk space (164875993088 B)
[2025-07-28 13:45:17] 2025-07-28 11:44:47,730 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 13:45:17] 2025-07-28 11:44:47,730 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 13:45:17] 2025-07-28 11:44:47,730 | INFO     | update_server=False
[2025-07-28 13:45:17] 2025-07-28 11:44:47,730 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 13:45:17] 2025-07-28 11:44:47,731 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 13:45:17] 2025-07-28 11:44:47,731 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 13:45:17] 2025-07-28 11:44:47,731 | INFO     | will abort loop
[2025-07-28 13:45:17] 2025-07-28 11:44:47,840 | INFO     | all data control threads have been joined
[2025-07-28 13:45:17] 2025-07-28 11:44:48,302 | INFO     | all payload control threads have been joined
[2025-07-28 13:45:17] 2025-07-28 11:44:48,463 | INFO     | all job control threads have been joined
[2025-07-28 13:45:17] 2025-07-28 11:44:48,736 | INFO     | [job] retrieve thread has finished
[2025-07-28 13:45:17] 2025-07-28 11:44:48,736 | INFO     | [job] queue monitor thread has finished
[2025-07-28 13:45:17] 2025-07-28 11:44:48,736 | INFO     | [job] job monitor thread has finished
[2025-07-28 13:45:17] 2025-07-28 11:44:48,846 | INFO     | [data] control thread has finished
[2025-07-28 13:45:17] 2025-07-28 11:44:49,121 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 13:45:17] 2025-07-28 11:44:49,307 | INFO     | [payload] control thread has finished
[2025-07-28 13:45:17] 2025-07-28 11:44:49,468 | INFO     | [job] control thread has finished
[2025-07-28 13:45:17] 2025-07-28 11:44:49,515 | INFO     | [data] copytool_in thread has finished
[2025-07-28 13:45:17] 2025-07-28 11:44:49,633 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 13:45:17] 2025-07-28 11:44:49,642 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 13:45:17] 2025-07-28 11:44:49,763 | INFO     | [payload] failed_post thread has finished
[2025-07-28 13:45:17] 2025-07-28 11:44:50,128 | INFO     | [job] validate thread has finished
[2025-07-28 13:45:17] 2025-07-28 11:44:50,223 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 13:45:17] 2025-07-28 11:44:50,230 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 13:45:17] 2025-07-28 11:44:50,293 | INFO     | [payload] validate_post thread has finished
[2025-07-28 13:45:17] 2025-07-28 11:44:51,128 | INFO     | [data] copytool_out thread has finished
[2025-07-28 13:45:17] 2025-07-28 11:44:53,649 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 13:45:17] 2025-07-28 11:44:58,598 | INFO     | job.realtimelogging is not enabled
[2025-07-28 13:45:17] 2025-07-28 11:44:59,604 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 13:45:17] 2025-07-28 11:45:00,938 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140509496842048)>', '<ExcThread(monitor, started 140508705842944)>']
[2025-07-28 13:45:17] 2025-07-28 11:45:05,964 | INFO     | all workflow threads have been joined
[2025-07-28 13:45:17] 2025-07-28 11:45:05,964 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 13:45:17] 2025-07-28 11:45:05,964 | INFO     | traces error code: 0
[2025-07-28 13:45:17] 2025-07-28 11:45:05,964 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 13:45:17] 2025-07-28 11:45:17,268 | INFO     | PID=2309571 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 13:45:17] 2025-07-28 11:45:17,268 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 13:45:17] 2025-07-28 11:45:17,268 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 13:45:17] 2025-07-28 11:45:17,268 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 13:45:17] 2025-07-28 11:45:17,268 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 13:45:17] 2025-07-28 11:45:17,268 | INFO     | [monitor] control thread has ended
[2025-07-28 13:45:17] 2025-07-28 11:45:17,314 [wrapper] ==== pilot stdout END ====
[2025-07-28 13:45:17] 2025-07-28 11:45:17,317 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 13:45:17] 2025-07-28 11:45:17,319 [wrapper] pilotpid: 2309571
[2025-07-28 13:45:17] 2025-07-28 11:45:17,321 [wrapper] Pilot exit status: 0
[2025-07-28 13:45:17] 2025-07-28 11:45:17,329 [wrapper] pandaids: 6747626553
[2025-07-28 13:45:17] 2025-07-28 11:45:17,344 [wrapper] cleanup supervisor_pilot 2328430 2309572
[2025-07-28 13:45:17] 2025-07-28 11:45:17,347 [wrapper] Test setup, not cleaning
[2025-07-28 13:45:17] 2025-07-28 11:45:17,349 [wrapper] apfmon messages muted
[2025-07-28 13:45:17] 2025-07-28 11:45:17,351 [wrapper] ==== wrapper stdout END ====
[2025-07-28 13:45:17] 2025-07-28 11:45:17,353 [wrapper] ==== wrapper stderr END ====
[2025-07-28 13:45:17]  *** Error codes and diagnostics ***
[2025-07-28 13:45:17]     "exeErrorCode": 0,
[2025-07-28 13:45:17]     "exeErrorDiag": "",
[2025-07-28 13:45:17]     "pilotErrorCode": 0,
[2025-07-28 13:45:17]     "pilotErrorDiag": "",
[2025-07-28 13:45:17]  *** Listing of results directory ***
[2025-07-28 13:45:17] total 351604
[2025-07-28 13:45:17] -rw-r--r-- 1 boinc boinc    530466 Jul 27 21:12 pilot3.tar.gz
[2025-07-28 13:45:17] -rwx------ 1 boinc boinc     36292 Jul 27 21:25 runpilot2-wrapper.sh
[2025-07-28 13:45:17] -rw-r--r-- 1 boinc boinc      5112 Jul 27 21:25 queuedata.json
[2025-07-28 13:45:17] -rw-r--r-- 1 boinc boinc       100 Jul 28 12:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 13:45:17] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 12:08 run_atlas
[2025-07-28 13:45:17] -rw-r--r-- 1 boinc boinc       105 Jul 28 12:08 job.xml
[2025-07-28 13:45:17] -rw-r--r-- 2 boinc boinc 145146061 Jul 28 12:08 EVNT.45743347._002961.pool.root.1
[2025-07-28 13:45:17] -rw-r--r-- 2 boinc boinc    542881 Jul 28 12:08 input.tar.gz
[2025-07-28 13:45:17] -rw-r--r-- 2 boinc boinc     15095 Jul 28 12:08 start_atlas.sh
[2025-07-28 13:45:17] drwxrwx--x 2 boinc boinc      4096 Jul 28 12:08 shared
[2025-07-28 13:45:17] -rw-r--r-- 1 boinc boinc         0 Jul 28 12:08 boinc_setup_complete
[2025-07-28 13:45:17] -rw-r--r-- 1 boinc boinc      6449 Jul 28 12:08 init_data.xml
[2025-07-28 13:45:17] -rw-r--r-- 1 boinc boinc         0 Jul 28 12:08 boinc_lockfile
[2025-07-28 13:45:17] -rw-r--r-- 1 boinc boinc      2560 Jul 28 12:08 pandaJob.out
[2025-07-28 13:45:17] -rw------- 1 boinc boinc    978460 Jul 28 12:08 agis_schedconf.cvmfs.json
[2025-07-28 13:45:17] -rw------- 1 boinc boinc   1593052 Jul 28 12:08 agis_ddmendpoints.agis.ALL.json
[2025-07-28 13:45:17] drwx------ 4 boinc boinc      4096 Jul 28 12:08 pilot3
[2025-07-28 13:45:17] -rw------- 1 boinc boinc 209459280 Jul 28 13:44 HITS.45743349._054614.pool.root.1
[2025-07-28 13:45:17] -rw-r--r-- 1 boinc boinc       529 Jul 28 13:44 boinc_task_state.xml
[2025-07-28 13:45:17] -rw------- 1 boinc boinc        95 Jul 28 13:44 pilot_heartbeat.json
[2025-07-28 13:45:17] -rw------- 1 boinc boinc      1014 Jul 28 13:44 memory_monitor_summary.json
[2025-07-28 13:45:17] -rw------- 1 boinc boinc    221186 Jul 28 13:44 log.45743349._054614.job.log.tgz.1
[2025-07-28 13:45:17] -rw------- 1 boinc boinc      7739 Jul 28 13:44 heartbeat.json
[2025-07-28 13:45:17] -rw-r--r-- 1 boinc boinc      8192 Jul 28 13:45 boinc_mmap_file
[2025-07-28 13:45:17] -rw-r--r-- 1 boinc boinc        27 Jul 28 13:45 wrapper_checkpoint.txt
[2025-07-28 13:45:17] -rw------- 1 boinc boinc       747 Jul 28 13:45 pilotlog.txt
[2025-07-28 13:45:17] -rw------- 1 boinc boinc    558005 Jul 28 13:45 log.45743349._054614.job.log.1
[2025-07-28 13:45:17] -rw------- 1 boinc boinc       357 Jul 28 13:45 output.list
[2025-07-28 13:45:17] -rw-r--r-- 1 boinc boinc       620 Jul 28 13:45 runtime_log
[2025-07-28 13:45:17] -rw------- 1 boinc boinc    798720 Jul 28 13:45 result.tar.gz
[2025-07-28 13:45:17] -rw-r--r-- 1 boinc boinc      8739 Jul 28 13:45 runtime_log.err
[2025-07-28 13:45:17] -rw------- 1 boinc boinc       660 Jul 28 13:45 7baNDmyAM07n9Rq4apOajLDm4fhM0noT9bVof3QYDmQ12KDm93TKXn.diag
[2025-07-28 13:45:17] -rw-r--r-- 1 boinc boinc     21462 Jul 28 13:45 stderr.txt
[2025-07-28 13:45:17] HITS file was successfully produced:
[2025-07-28 13:45:17] -rw------- 1 boinc boinc 209459280 Jul 28 13:44 shared/HITS.pool.root.1
[2025-07-28 13:45:17]  *** Contents of shared directory: ***
[2025-07-28 13:45:17] total 347636
[2025-07-28 13:45:17] -rw-r--r-- 2 boinc boinc 145146061 Jul 28 12:08 ATLAS.root_0
[2025-07-28 13:45:17] -rw-r--r-- 2 boinc boinc    542881 Jul 28 12:08 input.tar.gz
[2025-07-28 13:45:17] -rw-r--r-- 2 boinc boinc     15095 Jul 28 12:08 start_atlas.sh
[2025-07-28 13:45:17] -rw------- 1 boinc boinc 209459280 Jul 28 13:44 HITS.pool.root.1
[2025-07-28 13:45:17] -rw------- 1 boinc boinc    798720 Jul 28 13:45 result.tar.gz
13:45:18 (2305929): run_atlas exited; CPU time 16579.776754
13:45:18 (2305929): called boinc_finish(0)

</stderr_txt>
]]>

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