Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:47:01 (440060): wrapper (7.7.26015): starting
17:47:01 (440060): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 17:47:01] Arguments: --nthreads 8
[2025-07-27 17:47:01] Threads: 8
[2025-07-27 17:47:01] Checking for CVMFS
[2025-07-27 17:47:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:47:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:47:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:47:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:47:01] 2.12.6.0 3576101 18922 375580 148825 0 310 26551580 40960000 12371 16776704 0 62836145 99.864 68614884 24665 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 17:47:01] CVMFS is ok
[2025-07-27 17:47:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:47:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:47:01] Further information can be found at the LHC@home message board.
[2025-07-27 17:47:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:47:01] Checking for apptainer binary...
[2025-07-27 17:47:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:47:01] Running /usr/bin/apptainer --version
[2025-07-27 17:47:01] apptainer version 1.4.1-1.el9
[2025-07-27 17:47:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:47:02] c7-11-12.aglt2.org
[2025-07-27 17:47:02] apptainer works
[2025-07-27 17:47:02] Set ATHENA_PROC_NUMBER=8
[2025-07-27 17:47:02] Set ATHENA_CORE_NUMBER=8
[2025-07-27 17:47:02] Starting ATLAS job with PandaID=6747412692
[2025-07-27 17:47:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:10:47]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:10:47]  lfn=log.45743349._049612.job.log.tgz.1
[2025-07-27 19:10:47]  mtime=0
[2025-07-27 19:10:47]  protocol_id=None
[2025-07-27 19:10:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 19:10:47]  replicas=None
[2025-07-27 19:10:47]  scope=mc23_13p6TeV
[2025-07-27 19:10:47]  status=None
[2025-07-27 19:10:47]  status_code=0
[2025-07-27 19:10:47]  storage_token=
[2025-07-27 19:10:47]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747412692/log.45743349._049612.job.log.tgz.1
[2025-07-27 19:10:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/dc/log.45743349._049612.job.log.tgz.1
[2025-07-27 19:10:47]  workdir=None
[2025-07-27 19:10:47] ]
[2025-07-27 19:10:47] 2025-07-27 23:10:25,821 | INFO     | transferring file log.45743349._049612.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747412692/log.45743349._049612.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 19:10:47] 2025-07-27 23:10:25,822 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747412692/log.45743349._049612.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._049612.job
[2025-07-27 19:10:47] 2025-07-27 23:10:25,847 | INFO     | adding to output.list: log.45743349._049612.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/dc/log.45743349._049612.job.log.tg
[2025-07-27 19:10:47] 2025-07-27 23:10:25,848 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 19:10:47] 2025-07-27 23:10:25,848 | INFO     | summary of transferred files:
[2025-07-27 19:10:47] 2025-07-27 23:10:25,848 | INFO     |  -- lfn=log.45743349._049612.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:10:47] 2025-07-27 23:10:25,849 | INFO     | stage-out finished correctly
[2025-07-27 19:10:47] 2025-07-27 23:10:25,922 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:10:47] 2025-07-27 23:10:26,529 | INFO     | monitor loop #368: job 0:6747412692 is in state 'finished'
[2025-07-27 19:10:47] 2025-07-27 23:10:26,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:10:47] 2025-07-27 23:10:26,906 | INFO     | job 6747412692 has state=finished
[2025-07-27 19:10:47] 2025-07-27 23:10:26,909 | INFO     | preparing for final server update for job 6747412692 in state='finished'
[2025-07-27 19:10:47] 2025-07-27 23:10:26,909 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:10:47] 2025-07-27 23:10:26,909 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:10:47] 2025-07-27 23:10:26,910 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:10:47] 2025-07-27 23:10:26,910 | INFO     | job 6747412692 has finished - writing final server update
[2025-07-27 19:10:47] 2025-07-27 23:10:26,910 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:10:47] 2025-07-27 23:10:26,911 | INFO     | executing command: lscpu
[2025-07-27 19:10:47] 2025-07-27 23:10:26,969 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:10:47] 2025-07-27 23:10:29,033 | INFO     | monitor loop #369: job 0:6747412692 is in state 'finished'
[2025-07-27 19:10:47] 2025-07-27 23:10:29,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:10:47] 2025-07-27 23:10:31,536 | INFO     | monitor loop #370: job 0:6747412692 is in state 'finished'
[2025-07-27 19:10:47] 2025-07-27 23:10:31,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:10:47] 2025-07-27 23:10:32,241 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 19:10:47] 2025-07-27 23:10:32,258 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3267.206546875
[2025-07-27 19:10:47] 2025-07-27 23:10:32,268 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747412692/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:10:47] 2025-07-27 23:10:32,268 | INFO     | extracted standard info from prmon json
[2025-07-27 19:10:47] 2025-07-27 23:10:32,268 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:10:47] 2025-07-27 23:10:32,268 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:10:47] 2025-07-27 23:10:32,269 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:10:47] 2025-07-27 23:10:32,269 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:10:47] 2025-07-27 23:10:32,270 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:10:47] 2025-07-27 23:10:32,270 | INFO     | sum of square deviations: 130793150.0
[2025-07-27 19:10:47] 2025-07-27 23:10:32,271 | INFO     | sum of deviations: -7388963122.999999
[2025-07-27 19:10:47] 2025-07-27 23:10:32,271 | INFO     | mean x: 1753655426.0
[2025-07-27 19:10:47] 2025-07-27 23:10:32,271 | INFO     | mean y: 2223121.7733333334
[2025-07-27 19:10:47] 2025-07-27 23:10:32,271 | INFO     | -- intersect: 99072359999.45273
[2025-07-27 19:10:47] 2025-07-27 23:10:32,271 | INFO     | intersect: 99072359999.45273
[2025-07-27 19:10:47] 2025-07-27 23:10:32,271 | INFO     | chi2: 0.1927055314608187
[2025-07-27 19:10:47] 2025-07-27 23:10:32,271 | INFO     | -- intersect: 99072359999.45273
[2025-07-27 19:10:47] 2025-07-27 23:10:32,271 | INFO     | current memory leak: -56.49 B/s (using 75 data points, chi2=0.19)
[2025-07-27 19:10:47] 2025-07-27 23:10:32,272 | INFO     | could have reported an average CPU frequency of 3259 MHz (6 samples)
[2025-07-27 19:10:47] 2025-07-27 23:10:32,272 | INFO     | ..............................
[2025-07-27 19:10:47] 2025-07-27 23:10:32,272 | INFO     | . Timing measurements:
[2025-07-27 19:10:47] 2025-07-27 23:10:32,272 | INFO     | . get job = 0 s
[2025-07-27 19:10:47] 2025-07-27 23:10:32,272 | INFO     | . initial setup = 2 s
[2025-07-27 19:10:47] 2025-07-27 23:10:32,272 | INFO     | . payload setup = 7 s
[2025-07-27 19:10:47] 2025-07-27 23:10:32,272 | INFO     | . stage-in = 0 s
[2025-07-27 19:10:47] 2025-07-27 23:10:32,272 | INFO     | . payload execution = 4963 s
[2025-07-27 19:10:47] 2025-07-27 23:10:32,272 | INFO     | . stage-out = 0 s
[2025-07-27 19:10:47] 2025-07-27 23:10:32,272 | INFO     | . log creation = 0 s
[2025-07-27 19:10:47] 2025-07-27 23:10:32,272 | INFO     | ..............................
[2025-07-27 19:10:47] 2025-07-27 23:10:32,346 | INFO     | 
[2025-07-27 19:10:47] 2025-07-27 23:10:32,347 | INFO     | job summary report
[2025-07-27 19:10:47] 2025-07-27 23:10:32,347 | INFO     | --------------------------------------------------
[2025-07-27 19:10:47] 2025-07-27 23:10:32,347 | INFO     | PanDA job id: 6747412692
[2025-07-27 19:10:47] 2025-07-27 23:10:32,347 | INFO     | task id: 45743349
[2025-07-27 19:10:47] 2025-07-27 23:10:32,347 | INFO     | errors: (none)
[2025-07-27 19:10:47] 2025-07-27 23:10:32,347 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:10:47] 2025-07-27 23:10:32,347 | INFO     | pilot state: finished 
[2025-07-27 19:10:47] 2025-07-27 23:10:32,347 | INFO     | transexitcode: 0
[2025-07-27 19:10:47] 2025-07-27 23:10:32,347 | INFO     | exeerrorcode: 0
[2025-07-27 19:10:47] 2025-07-27 23:10:32,347 | INFO     | exeerrordiag: 
[2025-07-27 19:10:47] 2025-07-27 23:10:32,347 | INFO     | exitcode: 0
[2025-07-27 19:10:47] 2025-07-27 23:10:32,347 | INFO     | exitmsg: OK
[2025-07-27 19:10:47] 2025-07-27 23:10:32,348 | INFO     | cpuconsumptiontime: 35389 s
[2025-07-27 19:10:47] 2025-07-27 23:10:32,348 | INFO     | nevents: 400
[2025-07-27 19:10:47] 2025-07-27 23:10:32,348 | INFO     | neventsw: 0
[2025-07-27 19:10:47] 2025-07-27 23:10:32,348 | INFO     | pid: 451425
[2025-07-27 19:10:47] 2025-07-27 23:10:32,348 | INFO     | pgrp: 451425
[2025-07-27 19:10:47] 2025-07-27 23:10:32,348 | INFO     | corecount: 8
[2025-07-27 19:10:47] 2025-07-27 23:10:32,348 | INFO     | event service: False
[2025-07-27 19:10:47] 2025-07-27 23:10:32,348 | INFO     | sizes: {0: 2397304, 1: 2397503, 6: 2397765, 11: 2397793, 4974: 2424040, 4975: 2433222, 4981: 2433360}
[2025-07-27 19:10:47] 2025-07-27 23:10:32,348 | INFO     | --------------------------------------------------
[2025-07-27 19:10:47] 2025-07-27 23:10:32,348 | INFO     | 
[2025-07-27 19:10:47] 2025-07-27 23:10:32,348 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 19:10:47] 2025-07-27 23:10:32,374 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,374 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,374 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,374 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,374 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,374 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,374 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,374 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,375 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,375 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,375 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,375 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,375 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,375 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:10:47] 2025-07-27 23:10:32,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,375 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:10:47] 2025-07-27 23:10:32,375 | INFO     | job 6747412692 has completed (purged errors)
[2025-07-27 19:10:47] 2025-07-27 23:10:32,375 | INFO     | overall cleanup function is called
[2025-07-27 19:10:47] 2025-07-27 23:10:33,384 | INFO     | --- collectZombieJob: --- 10, [451425]
[2025-07-27 19:10:47] 2025-07-27 23:10:33,384 | INFO     | zombie collector waiting for pid 451425
[2025-07-27 19:10:47] 2025-07-27 23:10:33,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:10:47] 2025-07-27 23:10:33,386 | INFO     | collected zombie processes
[2025-07-27 19:10:47] 2025-07-27 23:10:33,388 | INFO     | will attempt to kill all subprocesses of pid=451425
[2025-07-27 19:10:47] 2025-07-27 23:10:34,007 | INFO     | PID=443643 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:10:47] 2025-07-27 23:10:34,007 | INFO     | .. there are 17 such processes running
[2025-07-27 19:10:47] 2025-07-27 23:10:34,011 | INFO     | process IDs to be killed: [451425] (in reverse order)
[2025-07-27 19:10:47] 2025-07-27 23:10:34,121 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:10:47] 2025-07-27 23:10:34,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:10:47] 2025-07-27 23:10:34,138 | INFO     | did not find any defunct processes belonging to 451425
[2025-07-27 19:10:47] 2025-07-27 23:10:34,155 | INFO     | did not find any defunct processes belonging to 451425
[2025-07-27 19:10:47] 2025-07-27 23:10:34,155 | INFO     | ready for new job
[2025-07-27 19:10:47] 2025-07-27 23:10:34,155 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:10:47] 2025-07-27 23:10:34,157 | INFO     | ***************************************
[2025-07-27 19:10:47] 2025-07-27 23:10:34,157 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:10:47] 2025-07-27 23:10:34,157 | INFO     | ***************************************
[2025-07-27 19:10:47] 2025-07-27 23:10:34,157 | INFO     | 
[2025-07-27 19:10:47] 2025-07-27 23:10:34,173 | INFO     | architecture information:
[2025-07-27 19:10:47] 2025-07-27 23:10:34,173 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:10:47] 2025-07-27 23:10:34,191 | INFO     | cat /etc/os-release:
[2025-07-27 19:10:47] NAME="CentOS Linux"
[2025-07-27 19:10:47] VERSION="7 (Core)"
[2025-07-27 19:10:47] ID="centos"
[2025-07-27 19:10:47] ID_LIKE="rhel fedora"
[2025-07-27 19:10:47] VERSION_ID="7"
[2025-07-27 19:10:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:10:47] ANSI_COLOR="0;31"
[2025-07-27 19:10:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:10:47] HOME_URL="https://www.centos.org/"
[2025-07-27 19:10:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:10:47] 
[2025-07-27 19:10:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:10:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:10:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:10:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:10:47] 
[2025-07-27 19:10:47] 2025-07-27 23:10:34,191 | INFO     | ***************************************
[2025-07-27 19:10:47] 2025-07-27 23:10:34,694 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 19:10:47] 2025-07-27 23:10:34,713 | INFO     | sufficient remaining disk space (85875228672 B)
[2025-07-27 19:10:47] 2025-07-27 23:10:34,714 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:10:47] 2025-07-27 23:10:34,714 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:10:47] 2025-07-27 23:10:34,714 | INFO     | update_server=False
[2025-07-27 19:10:47] 2025-07-27 23:10:34,714 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:10:47] 2025-07-27 23:10:34,715 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:10:47] 2025-07-27 23:10:34,715 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 19:10:47] 2025-07-27 23:10:34,715 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:10:47] 2025-07-27 23:10:34,716 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:10:47] 2025-07-27 23:10:34,716 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:10:47] 2025-07-27 23:10:34,843 | INFO     | all data control threads have been joined
[2025-07-27 19:10:47] 2025-07-27 23:10:35,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:10:47] 2025-07-27 23:10:35,045 | INFO     | aborting loop
[2025-07-27 19:10:47] 2025-07-27 23:10:35,269 | INFO     | all job control threads have been joined
[2025-07-27 19:10:47] 2025-07-27 23:10:35,720 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:10:47] 2025-07-27 23:10:35,746 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:10:47] 2025-07-27 23:10:35,748 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:10:47] 2025-07-27 23:10:35,848 | INFO     | [data] control thread has finished
[2025-07-27 19:10:47] 2025-07-27 23:10:35,894 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:10:47] 2025-07-27 23:10:36,049 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:10:47] 2025-07-27 23:10:36,161 | INFO     | all payload control threads have been joined
[2025-07-27 19:10:47] 2025-07-27 23:10:36,266 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:10:47] 2025-07-27 23:10:36,274 | INFO     | [job] control thread has finished
[2025-07-27 19:10:47] 2025-07-27 23:10:36,433 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:10:47] 2025-07-27 23:10:36,504 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:10:47] 2025-07-27 23:10:36,561 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:10:47] 2025-07-27 23:10:36,721 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:10:47] 2025-07-27 23:10:36,954 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:10:47] 2025-07-27 23:10:37,166 | INFO     | [payload] control thread has finished
[2025-07-27 19:10:47] 2025-07-27 23:10:37,179 | INFO     | [job] validate thread has finished
[2025-07-27 19:10:47] 2025-07-27 23:10:37,359 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:10:47] 2025-07-27 23:10:38,364 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:10:47] 2025-07-27 23:10:40,511 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:10:47] 2025-07-27 23:10:42,092 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140663518046016)>', '<ExcThread(monitor, started 140662661969664)>']
[2025-07-27 19:10:47] 2025-07-27 23:10:42,754 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:10:47] 2025-07-27 23:10:42,754 | INFO     | [monitor] control thread has ended
[2025-07-27 19:10:47] 2025-07-27 23:10:47,117 | INFO     | all workflow threads have been joined
[2025-07-27 19:10:47] 2025-07-27 23:10:47,119 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:10:47] 2025-07-27 23:10:47,119 | INFO     | traces error code: 0
[2025-07-27 19:10:47] 2025-07-27 23:10:47,120 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:10:47] 2025-07-27 23:10:47,254 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:10:47] 2025-07-27 23:10:47,260 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:10:47] 2025-07-27 23:10:47,265 [wrapper] pilotpid: 443643
[2025-07-27 19:10:47] 2025-07-27 23:10:47,270 [wrapper] Pilot exit status: 0
[2025-07-27 19:10:47] 2025-07-27 23:10:47,291 [wrapper] pandaids: 6747412692
[2025-07-27 19:10:47] 2025-07-27 23:10:47,371 [wrapper] cleanup supervisor_pilot  789359 443644
[2025-07-27 19:10:47] 2025-07-27 23:10:47,376 [wrapper] Test setup, not cleaning
[2025-07-27 19:10:47] 2025-07-27 23:10:47,381 [wrapper] apfmon messages muted
[2025-07-27 19:10:47] 2025-07-27 23:10:47,387 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:10:47] 2025-07-27 23:10:47,392 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:10:47]  *** Error codes and diagnostics ***
[2025-07-27 19:10:47]     "exeErrorCode": 0,
[2025-07-27 19:10:47]     "exeErrorDiag": "",
[2025-07-27 19:10:47]     "pilotErrorCode": 0,
[2025-07-27 19:10:47]     "pilotErrorDiag": "",
[2025-07-27 19:10:47]  *** Listing of results directory ***
[2025-07-27 19:10:47] total 429724
[2025-07-27 19:10:47] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 09:42 pilot3.tar.gz
[2025-07-27 19:10:47] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 10:04 queuedata.json
[2025-07-27 19:10:47] -rwx------. 1 boincer umatlas     36292 Jul 27 10:06 runpilot2-wrapper.sh
[2025-07-27 19:10:47] -rw-r--r--. 1 boincer umatlas       100 Jul 27 17:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:10:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 17:47 run_atlas
[2025-07-27 19:10:47] -rw-r--r--. 1 boincer umatlas       105 Jul 27 17:47 job.xml
[2025-07-27 19:10:47] -rw-r--r--. 2 boincer umatlas 228737137 Jul 27 17:47 EVNT.45743347._002735.pool.root.1
[2025-07-27 19:10:47] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 17:47 shared
[2025-07-27 19:10:47] -rw-r--r--. 2 boincer umatlas    542902 Jul 27 17:47 input.tar.gz
[2025-07-27 19:10:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:47 start_atlas.sh
[2025-07-27 19:10:47] -rw-r--r--. 1 boincer umatlas         0 Jul 27 17:47 boinc_lockfile
[2025-07-27 19:10:47] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 17:47 pandaJob.out
[2025-07-27 19:10:47] -rw-------. 1 boincer umatlas    980117 Jul 27 17:47 agis_schedconf.cvmfs.json
[2025-07-27 19:10:47] -rw-------. 1 boincer umatlas   1593052 Jul 27 17:47 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:10:47] drwx------. 4 boincer umatlas      4096 Jul 27 17:47 pilot3
[2025-07-27 19:10:47] -rw-r--r--. 1 boincer umatlas      6897 Jul 27 19:09 init_data.xml
[2025-07-27 19:10:47] -rw-------. 1 boincer umatlas 205817421 Jul 27 19:09 HITS.45743349._049612.pool.root.1
[2025-07-27 19:10:47] -rw-r--r--. 1 boincer umatlas       529 Jul 27 19:10 boinc_task_state.xml
[2025-07-27 19:10:47] -rw-------. 1 boincer umatlas        95 Jul 27 19:10 pilot_heartbeat.json
[2025-07-27 19:10:47] -rw-------. 1 boincer umatlas      1027 Jul 27 19:10 memory_monitor_summary.json
[2025-07-27 19:10:47] -rw-------. 1 boincer umatlas    314802 Jul 27 19:10 log.45743349._049612.job.log.tgz.1
[2025-07-27 19:10:47] -rw-------. 1 boincer umatlas      7766 Jul 27 19:10 heartbeat.json
[2025-07-27 19:10:47] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:10 boinc_mmap_file
[2025-07-27 19:10:47] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:10 wrapper_checkpoint.txt
[2025-07-27 19:10:47] -rw-------. 1 boincer umatlas      4480 Jul 27 19:10 pilotlog.txt
[2025-07-27 19:10:47] -rw-------. 1 boincer umatlas    487165 Jul 27 19:10 log.45743349._049612.job.log.1
[2025-07-27 19:10:47] -rw-------. 1 boincer umatlas       357 Jul 27 19:10 output.list
[2025-07-27 19:10:47] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:10 runtime_log
[2025-07-27 19:10:47] -rw-------. 1 boincer umatlas    819200 Jul 27 19:10 result.tar.gz
[2025-07-27 19:10:47] -rw-------. 1 boincer umatlas       652 Jul 27 19:10 TLlNDmfCH07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOTVLDmxtvdem.diag
[2025-07-27 19:10:47] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 19:10 runtime_log.err
[2025-07-27 19:10:47] -rw-r--r--. 1 boincer umatlas     21691 Jul 27 19:10 stderr.txt
[2025-07-27 19:10:47] HITS file was successfully produced:
[2025-07-27 19:10:47] -rw-------. 1 boincer umatlas 205817421 Jul 27 19:09 shared/HITS.pool.root.1
[2025-07-27 19:10:47]  *** Contents of shared directory: ***
[2025-07-27 19:10:47] total 425732
[2025-07-27 19:10:47] -rw-r--r--. 2 boincer umatlas 228737137 Jul 27 17:47 ATLAS.root_0
[2025-07-27 19:10:47] -rw-r--r--. 2 boincer umatlas    542902 Jul 27 17:47 input.tar.gz
[2025-07-27 19:10:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:47 start_atlas.sh
[2025-07-27 19:10:47] -rw-------. 1 boincer umatlas 205817421 Jul 27 19:09 HITS.pool.root.1
[2025-07-27 19:10:47] -rw-------. 1 boincer umatlas    819200 Jul 27 19:10 result.tar.gz
19:10:49 (440060): run_atlas exited; CPU time 35422.303209
19:10:49 (440060): called boinc_finish(0)

</stderr_txt>
]]>

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