Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:42:50 (199768): wrapper (7.7.26015): starting
17:42:50 (199768): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 17:42:50] Arguments: --nthreads 8
[2025-07-27 17:42:50] Threads: 8
[2025-07-27 17:42:50] Checking for CVMFS
[2025-07-27 17:42:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:42:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:42:51] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:42:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:42:51] 2.13.1.0 645510 14739 263584 148825 1 196 37083977 40960001 9756 16776704 0 51412986 99.793 41428134 36979 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 17:42:51] CVMFS is ok
[2025-07-27 17:42:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:42:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:42:51] Further information can be found at the LHC@home message board.
[2025-07-27 17:42:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:42:51] Checking for apptainer binary...
[2025-07-27 17:42:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:42:51] Running /usr/bin/apptainer --version
[2025-07-27 17:42:51] apptainer version 1.4.1-1.el9
[2025-07-27 17:42:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:42:51] c-212-5.aglt2.org
[2025-07-27 17:42:51] apptainer works
[2025-07-27 17:42:51] Set ATHENA_PROC_NUMBER=8
[2025-07-27 17:42:51] Set ATHENA_CORE_NUMBER=8
[2025-07-27 17:42:51] Starting ATLAS job with PandaID=6747626383
[2025-07-27 17:42:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:00:25]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:00:25]  status=None
[2025-07-27 19:00:25]  status_code=0
[2025-07-27 19:00:25]  storage_token=
[2025-07-27 19:00:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747626383/log.45743349._054485.job.log.tgz.1
[2025-07-27 19:00:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/d8/log.45743349._054485.job.log.tgz.1
[2025-07-27 19:00:25]  workdir=None
[2025-07-27 19:00:25] ]
[2025-07-27 19:00:25] 2025-07-27 22:59:43,127 | INFO     | transferring file log.45743349._054485.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747626383/log.45743349._054485.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 19:00:25] 2025-07-27 22:59:43,127 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747626383/log.45743349._054485.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._054485.job
[2025-07-27 19:00:25] 2025-07-27 22:59:43,155 | INFO     | adding to output.list: log.45743349._054485.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/d8/log.45743349._054485.job.log.tg
[2025-07-27 19:00:25] 2025-07-27 22:59:43,156 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 19:00:25] 2025-07-27 22:59:43,156 | INFO     | summary of transferred files:
[2025-07-27 19:00:25] 2025-07-27 22:59:43,156 | INFO     |  -- lfn=log.45743349._054485.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:00:25] 2025-07-27 22:59:43,156 | INFO     | stage-out finished correctly
[2025-07-27 19:00:25] 2025-07-27 22:59:43,951 | WARNING  | process 212428 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 19:00:25] 2025-07-27 22:59:43,951 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747626383/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:00:25] 2025-07-27 22:59:43,952 | INFO     | reaping zombies for max 20 seconds
[2025-07-27 19:00:25] 2025-07-27 22:59:43,969 | INFO     | checking for looping job (in state=finished)
[2025-07-27 19:00:25] 2025-07-27 22:59:43,970 | INFO     | using looping job limit: 7200 s
[2025-07-27 19:00:25] 2025-07-27 22:59:44,306 | INFO     | number of running child processes to parent process 212428: 1
[2025-07-27 19:00:25] 2025-07-27 22:59:44,306 | INFO     | maximum number of monitored processes: 6
[2025-07-27 19:00:25] 2025-07-27 22:59:46,093 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:00:25] 2025-07-27 22:59:46,322 | INFO     | job 6747626383 has state=finished
[2025-07-27 19:00:25] 2025-07-27 22:59:46,322 | INFO     | preparing for final server update for job 6747626383 in state='finished'
[2025-07-27 19:00:25] 2025-07-27 22:59:46,323 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:00:25] 2025-07-27 22:59:46,323 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:00:25] 2025-07-27 22:59:46,323 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:00:25] 2025-07-27 22:59:46,323 | INFO     | job 6747626383 has finished - writing final server update
[2025-07-27 19:00:25] 2025-07-27 22:59:46,323 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:00:25] 2025-07-27 22:59:46,324 | INFO     | executing command: lscpu
[2025-07-27 19:00:25] 2025-07-27 22:59:46,392 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:00:25] 2025-07-27 22:59:46,810 | INFO     | monitor loop #339: job 0:6747626383 is in state 'finished'
[2025-07-27 19:00:25] 2025-07-27 22:59:46,810 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:00:25] 2025-07-27 22:59:49,313 | INFO     | monitor loop #340: job 0:6747626383 is in state 'finished'
[2025-07-27 19:00:25] 2025-07-27 22:59:49,315 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:00:25] 2025-07-27 22:59:51,818 | INFO     | monitor loop #341: job 0:6747626383 is in state 'finished'
[2025-07-27 19:00:25] 2025-07-27 22:59:51,819 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:00:25] 2025-07-27 22:59:52,513 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 19:00:25] 2025-07-27 22:59:52,519 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3279.135083333333
[2025-07-27 19:00:25] 2025-07-27 22:59:52,535 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747626383/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:00:25] 2025-07-27 22:59:52,536 | INFO     | extracted standard info from prmon json
[2025-07-27 19:00:25] 2025-07-27 22:59:52,536 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:00:25] 2025-07-27 22:59:52,536 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:00:25] 2025-07-27 22:59:52,536 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:00:25] 2025-07-27 22:59:52,536 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:00:25] 2025-07-27 22:59:52,538 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:00:25] 2025-07-27 22:59:52,538 | INFO     | sum of square deviations: 97479037.0
[2025-07-27 19:00:25] 2025-07-27 22:59:52,538 | INFO     | sum of deviations: -1162351523.0000002
[2025-07-27 19:00:25] 2025-07-27 22:59:52,538 | INFO     | mean x: 1753654962.5
[2025-07-27 19:00:25] 2025-07-27 22:59:52,538 | INFO     | mean y: 2535713.7352941176
[2025-07-27 19:00:25] 2025-07-27 22:59:52,539 | INFO     | -- intersect: 20913324117.178215
[2025-07-27 19:00:25] 2025-07-27 22:59:52,539 | INFO     | intersect: 20913324117.178215
[2025-07-27 19:00:25] 2025-07-27 22:59:52,539 | INFO     | chi2: 0.007033434767241749
[2025-07-27 19:00:25] 2025-07-27 22:59:52,539 | INFO     | -- intersect: 20913324117.178215
[2025-07-27 19:00:25] 2025-07-27 22:59:52,539 | INFO     | current memory leak: -11.92 B/s (using 68 data points, chi2=0.01)
[2025-07-27 19:00:25] 2025-07-27 22:59:52,539 | INFO     | could have reported an average CPU frequency of 3279 MHz (6 samples)
[2025-07-27 19:00:25] 2025-07-27 22:59:52,539 | INFO     | ..............................
[2025-07-27 19:00:25] 2025-07-27 22:59:52,539 | INFO     | . Timing measurements:
[2025-07-27 19:00:25] 2025-07-27 22:59:52,540 | INFO     | . get job = 0 s
[2025-07-27 19:00:25] 2025-07-27 22:59:52,540 | INFO     | . initial setup = 2 s
[2025-07-27 19:00:25] 2025-07-27 22:59:52,540 | INFO     | . payload setup = 8 s
[2025-07-27 19:00:25] 2025-07-27 22:59:52,540 | INFO     | . stage-in = 0 s
[2025-07-27 19:00:25] 2025-07-27 22:59:52,540 | INFO     | . payload execution = 4570 s
[2025-07-27 19:00:25] 2025-07-27 22:59:52,540 | INFO     | . stage-out = 0 s
[2025-07-27 19:00:25] 2025-07-27 22:59:52,540 | INFO     | . log creation = 0 s
[2025-07-27 19:00:25] 2025-07-27 22:59:52,540 | INFO     | ..............................
[2025-07-27 19:00:25] 2025-07-27 22:59:52,620 | INFO     | 
[2025-07-27 19:00:25] 2025-07-27 22:59:52,620 | INFO     | job summary report
[2025-07-27 19:00:25] 2025-07-27 22:59:52,620 | INFO     | --------------------------------------------------
[2025-07-27 19:00:25] 2025-07-27 22:59:52,620 | INFO     | PanDA job id: 6747626383
[2025-07-27 19:00:25] 2025-07-27 22:59:52,620 | INFO     | task id: 45743349
[2025-07-27 19:00:25] 2025-07-27 22:59:52,620 | INFO     | errors: (none)
[2025-07-27 19:00:25] 2025-07-27 22:59:52,620 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:00:25] 2025-07-27 22:59:52,620 | INFO     | pilot state: finished 
[2025-07-27 19:00:25] 2025-07-27 22:59:52,620 | INFO     | transexitcode: 0
[2025-07-27 19:00:25] 2025-07-27 22:59:52,620 | INFO     | exeerrorcode: 0
[2025-07-27 19:00:25] 2025-07-27 22:59:52,621 | INFO     | exeerrordiag: 
[2025-07-27 19:00:25] 2025-07-27 22:59:52,621 | INFO     | exitcode: 0
[2025-07-27 19:00:25] 2025-07-27 22:59:52,621 | INFO     | exitmsg: OK
[2025-07-27 19:00:25] 2025-07-27 22:59:52,621 | INFO     | cpuconsumptiontime: 33688 s
[2025-07-27 19:00:25] 2025-07-27 22:59:52,621 | INFO     | nevents: 400
[2025-07-27 19:00:25] 2025-07-27 22:59:52,621 | INFO     | neventsw: 0
[2025-07-27 19:00:25] 2025-07-27 22:59:52,621 | INFO     | pid: 212428
[2025-07-27 19:00:25] 2025-07-27 22:59:52,621 | INFO     | pgrp: 212428
[2025-07-27 19:00:25] 2025-07-27 22:59:52,621 | INFO     | corecount: 8
[2025-07-27 19:00:25] 2025-07-27 22:59:52,621 | INFO     | event service: False
[2025-07-27 19:00:25] 2025-07-27 22:59:52,621 | INFO     | sizes: {0: 2397304, 1: 2397503, 6: 2397765, 11: 2397793, 4582: 2423816, 4583: 2432814, 4586: 2432998, 4593: 2433192}
[2025-07-27 19:00:25] 2025-07-27 22:59:52,621 | INFO     | --------------------------------------------------
[2025-07-27 19:00:25] 2025-07-27 22:59:52,621 | INFO     | 
[2025-07-27 19:00:25] 2025-07-27 22:59:52,622 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 19:00:25] 2025-07-27 22:59:52,647 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,647 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,647 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,647 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,647 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,647 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,647 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,647 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,647 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,648 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,648 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,648 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,648 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,648 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,648 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,648 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,648 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,648 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:00:25] 2025-07-27 22:59:52,648 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,648 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:00:25] 2025-07-27 22:59:52,649 | INFO     | job 6747626383 has completed (purged errors)
[2025-07-27 19:00:25] 2025-07-27 22:59:52,649 | INFO     | overall cleanup function is called
[2025-07-27 19:00:25] 2025-07-27 22:59:53,656 | INFO     | --- collectZombieJob: --- 10, [212428]
[2025-07-27 19:00:25] 2025-07-27 22:59:53,657 | INFO     | zombie collector waiting for pid 212428
[2025-07-27 19:00:25] 2025-07-27 22:59:53,657 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:00:25] 2025-07-27 22:59:53,657 | INFO     | collected zombie processes
[2025-07-27 19:00:25] 2025-07-27 22:59:53,657 | INFO     | will attempt to kill all subprocesses of pid=212428
[2025-07-27 19:00:25] 2025-07-27 22:59:54,031 | INFO     | process IDs to be killed: [212428] (in reverse order)
[2025-07-27 19:00:25] 2025-07-27 22:59:54,170 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:00:25] 2025-07-27 22:59:54,171 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:00:25] 2025-07-27 22:59:54,185 | INFO     | did not find any defunct processes belonging to 212428
[2025-07-27 19:00:25] 2025-07-27 22:59:54,197 | INFO     | did not find any defunct processes belonging to 212428
[2025-07-27 19:00:25] 2025-07-27 22:59:54,198 | INFO     | ready for new job
[2025-07-27 19:00:25] 2025-07-27 22:59:54,198 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:00:25] 2025-07-27 22:59:54,199 | INFO     | ***************************************
[2025-07-27 19:00:25] 2025-07-27 22:59:54,199 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:00:25] 2025-07-27 22:59:54,199 | INFO     | ***************************************
[2025-07-27 19:00:25] 2025-07-27 22:59:54,199 | INFO     | 
[2025-07-27 19:00:25] 2025-07-27 22:59:54,204 | INFO     | architecture information:
[2025-07-27 19:00:25] 2025-07-27 22:59:54,205 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:00:25] 2025-07-27 22:59:54,228 | INFO     | cat /etc/os-release:
[2025-07-27 19:00:25] NAME="CentOS Linux"
[2025-07-27 19:00:25] VERSION="7 (Core)"
[2025-07-27 19:00:25] ID="centos"
[2025-07-27 19:00:25] ID_LIKE="rhel fedora"
[2025-07-27 19:00:25] VERSION_ID="7"
[2025-07-27 19:00:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:00:25] ANSI_COLOR="0;31"
[2025-07-27 19:00:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:00:25] HOME_URL="https://www.centos.org/"
[2025-07-27 19:00:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:00:25] 
[2025-07-27 19:00:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:00:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:00:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:00:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:00:25] 
[2025-07-27 19:00:25] 2025-07-27 22:59:54,228 | INFO     | ***************************************
[2025-07-27 19:00:25] 2025-07-27 22:59:54,731 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 19:00:25] 2025-07-27 22:59:54,759 | INFO     | sufficient remaining disk space (124750135296 B)
[2025-07-27 19:00:25] 2025-07-27 22:59:54,760 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:00:25] 2025-07-27 22:59:54,760 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:00:25] 2025-07-27 22:59:54,760 | INFO     | update_server=False
[2025-07-27 19:00:25] 2025-07-27 22:59:54,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:00:25] 2025-07-27 22:59:54,806 | INFO     | all payload control threads have been joined
[2025-07-27 19:00:25] 2025-07-27 22:59:55,329 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:00:25] 2025-07-27 22:59:55,329 | INFO     | aborting loop
[2025-07-27 19:00:25] 2025-07-27 22:59:55,713 | INFO     | all data control threads have been joined
[2025-07-27 19:00:25] 2025-07-27 22:59:55,765 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:00:25] 2025-07-27 22:59:55,812 | INFO     | [payload] control thread has finished
[2025-07-27 19:00:25] 2025-07-27 22:59:55,818 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:00:25] 2025-07-27 22:59:56,119 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:00:25] 2025-07-27 22:59:56,239 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:00:25] 2025-07-27 22:59:56,334 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:00:25] 2025-07-27 22:59:56,368 | INFO     | all job control threads have been joined
[2025-07-27 19:00:25] 2025-07-27 22:59:56,378 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:00:25] 2025-07-27 22:59:56,669 | INFO     | [job] validate thread has finished
[2025-07-27 19:00:25] 2025-07-27 22:59:56,680 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:00:25] 2025-07-27 22:59:56,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:00:25] 2025-07-27 22:59:56,719 | INFO     | [data] control thread has finished
[2025-07-27 19:00:25] 2025-07-27 22:59:56,967 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:00:25] 2025-07-27 22:59:56,974 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:00:25] 2025-07-27 22:59:57,244 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:00:25] 2025-07-27 22:59:57,373 | INFO     | [job] control thread has finished
[2025-07-27 19:00:25] 2025-07-27 22:59:57,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:00:25] 2025-07-27 22:59:58,246 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:00:25] 2025-07-27 22:59:58,638 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:00:25] 2025-07-27 23:00:00,690 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:00:25] 2025-07-27 23:00:01,240 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140480720787264)>', '<ExcThread(monitor, started 140479781922560)>']
[2025-07-27 19:00:25] 2025-07-27 23:00:06,265 | INFO     | all workflow threads have been joined
[2025-07-27 19:00:25] 2025-07-27 23:00:06,266 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:00:25] 2025-07-27 23:00:06,266 | INFO     | traces error code: 0
[2025-07-27 19:00:25] 2025-07-27 23:00:06,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:00:25] 2025-07-27 23:00:24,731 | INFO     | PID=204524 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 19:00:25] 2025-07-27 23:00:24,732 | INFO     | .. there are 15 such processes running
[2025-07-27 19:00:25] 2025-07-27 23:00:24,732 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:00:25] 2025-07-27 23:00:24,732 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:00:25] 2025-07-27 23:00:24,732 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:00:25] 2025-07-27 23:00:24,732 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:00:25] 2025-07-27 23:00:24,732 | INFO     | [monitor] control thread has ended
[2025-07-27 19:00:25] 2025-07-27 23:00:24,833 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:00:25] 2025-07-27 23:00:24,836 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:00:25] 2025-07-27 23:00:24,839 [wrapper] pilotpid: 204524
[2025-07-27 19:00:25] 2025-07-27 23:00:24,841 [wrapper] Pilot exit status: 0
[2025-07-27 19:00:25] 2025-07-27 23:00:24,862 [wrapper] pandaids: 6747626383
[2025-07-27 19:00:25] 2025-07-27 23:00:24,941 [wrapper] cleanup supervisor_pilot  488142 204525
[2025-07-27 19:00:25] 2025-07-27 23:00:24,947 [wrapper] Test setup, not cleaning
[2025-07-27 19:00:25] 2025-07-27 23:00:24,952 [wrapper] apfmon messages muted
[2025-07-27 19:00:25] 2025-07-27 23:00:24,957 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:00:25] 2025-07-27 23:00:24,961 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:00:25]  *** Error codes and diagnostics ***
[2025-07-27 19:00:25]     "exeErrorCode": 0,
[2025-07-27 19:00:25]     "exeErrorDiag": "",
[2025-07-27 19:00:25]     "pilotErrorCode": 0,
[2025-07-27 19:00:25]     "pilotErrorDiag": "",
[2025-07-27 19:00:25]  *** Listing of results directory ***
[2025-07-27 19:00:25] total 356652
[2025-07-27 19:00:25] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 15:12 pilot3.tar.gz
[2025-07-27 19:00:25] -rwx------. 1 boincer umatlas     36292 Jul 27 15:18 runpilot2-wrapper.sh
[2025-07-27 19:00:25] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 15:18 queuedata.json
[2025-07-27 19:00:25] -rw-r--r--. 1 boincer umatlas       100 Jul 27 17:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:00:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 17:42 run_atlas
[2025-07-27 19:00:25] -rw-r--r--. 1 boincer umatlas       105 Jul 27 17:42 job.xml
[2025-07-27 19:00:25] -rw-r--r--. 2 boincer umatlas 148122593 Jul 27 17:42 EVNT.45743347._002952.pool.root.1
[2025-07-27 19:00:25] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:42 start_atlas.sh
[2025-07-27 19:00:25] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 17:42 shared
[2025-07-27 19:00:25] -rw-r--r--. 2 boincer umatlas    542894 Jul 27 17:42 input.tar.gz
[2025-07-27 19:00:25] -rw-r--r--. 1 boincer umatlas         0 Jul 27 17:42 boinc_lockfile
[2025-07-27 19:00:25] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 17:42 pandaJob.out
[2025-07-27 19:00:25] -rw-------. 1 boincer umatlas    980117 Jul 27 17:43 agis_schedconf.cvmfs.json
[2025-07-27 19:00:25] -rw-------. 1 boincer umatlas   1593052 Jul 27 17:43 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:00:25] drwx------. 4 boincer umatlas      4096 Jul 27 17:43 pilot3
[2025-07-27 19:00:25] -rw-r--r--. 1 boincer umatlas      6946 Jul 27 18:57 init_data.xml
[2025-07-27 19:00:25] -rw-------. 1 boincer umatlas 211698779 Jul 27 18:59 HITS.45743349._054485.pool.root.1
[2025-07-27 19:00:25] -rw-r--r--. 1 boincer umatlas       529 Jul 27 18:59 boinc_task_state.xml
[2025-07-27 19:00:25] -rw-------. 1 boincer umatlas      1025 Jul 27 18:59 memory_monitor_summary.json
[2025-07-27 19:00:25] -rw-------. 1 boincer umatlas    301995 Jul 27 18:59 log.45743349._054485.job.log.tgz.1
[2025-07-27 19:00:25] -rw-------. 1 boincer umatlas        95 Jul 27 18:59 pilot_heartbeat.json
[2025-07-27 19:00:25] -rw-------. 1 boincer umatlas      7757 Jul 27 18:59 heartbeat.json
[2025-07-27 19:00:25] -rw-------. 1 boincer umatlas       822 Jul 27 19:00 pilotlog.txt
[2025-07-27 19:00:25] -rw-------. 1 boincer umatlas    452959 Jul 27 19:00 log.45743349._054485.job.log.1
[2025-07-27 19:00:25] -rw-------. 1 boincer umatlas       357 Jul 27 19:00 output.list
[2025-07-27 19:00:25] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:00 runtime_log
[2025-07-27 19:00:25] -rw-------. 1 boincer umatlas    778240 Jul 27 19:00 result.tar.gz
[2025-07-27 19:00:25] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:00 boinc_mmap_file
[2025-07-27 19:00:25] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 19:00 runtime_log.err
[2025-07-27 19:00:25] -rw-------. 1 boincer umatlas       650 Jul 27 19:00 P3DODmx3L07n9Rq4apOajLDm4fhM0noT9bVof3QYDmy02KDmW1YOHn.diag
[2025-07-27 19:00:25] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:00 wrapper_checkpoint.txt
[2025-07-27 19:00:25] -rw-r--r--. 1 boincer umatlas     20677 Jul 27 19:00 stderr.txt
[2025-07-27 19:00:25] HITS file was successfully produced:
[2025-07-27 19:00:25] -rw-------. 1 boincer umatlas 211698779 Jul 27 18:59 shared/HITS.pool.root.1
[2025-07-27 19:00:25]  *** Contents of shared directory: ***
[2025-07-27 19:00:25] total 352708
[2025-07-27 19:00:25] -rw-r--r--. 2 boincer umatlas 148122593 Jul 27 17:42 ATLAS.root_0
[2025-07-27 19:00:25] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:42 start_atlas.sh
[2025-07-27 19:00:25] -rw-r--r--. 2 boincer umatlas    542894 Jul 27 17:42 input.tar.gz
[2025-07-27 19:00:25] -rw-------. 1 boincer umatlas 211698779 Jul 27 18:59 HITS.pool.root.1
[2025-07-27 19:00:25] -rw-------. 1 boincer umatlas    778240 Jul 27 19:00 result.tar.gz
19:00:27 (199768): run_atlas exited; CPU time 33789.630816
19:00:27 (199768): called boinc_finish(0)

</stderr_txt>
]]>

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