Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:42:25 (12303): wrapper (7.7.26015): starting
14:42:25 (12303): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 14:42:25] Arguments: --nthreads 8
[2025-07-28 14:42:25] Threads: 8
[2025-07-28 14:42:25] Checking for CVMFS
[2025-07-28 14:42:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 14:42:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 14:42:25] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 14:42:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 14:42:26] 2.11.2.0 896 110970 133980 148848 1 266 17530644 25165824 4006 130560 0 74564936 99.865 47753879 3680 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-28 14:42:26] CVMFS is ok
[2025-07-28 14:42:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 14:42:26] Checking for apptainer binary...
[2025-07-28 14:42:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 14:42:26] Running /usr/bin/apptainer --version
[2025-07-28 14:42:26] apptainer version 1.3.2-1.el7
[2025-07-28 14:42:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 14:42:27] cg-vwn277.simple-grid.lan
[2025-07-28 14:42:27] apptainer works
[2025-07-28 14:42:27] Set ATHENA_PROC_NUMBER=8
[2025-07-28 14:42:27] Set ATHENA_CORE_NUMBER=8
[2025-07-28 14:42:27] Starting ATLAS job with PandaID=6747626336
[2025-07-28 14:42:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 19:49:51]  *** The last 200 lines of the pilot log: ***
[2025-07-28 19:49:51] 2025-07-28 17:11:29,329 | INFO     | monitor loop #1094: job 0:6747626336 is in state 'finished'
[2025-07-28 19:49:51] 2025-07-28 17:11:29,329 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 19:49:51] 2025-07-28 17:11:30,416 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 19:49:51] 2025-07-28 17:11:30,417 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-07-28 19:49:51] 2025-07-28 17:11:30,419 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6747626336/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 19:49:51] 2025-07-28 17:11:30,420 | INFO     | extracted standard info from prmon json
[2025-07-28 19:49:51] 2025-07-28 17:11:30,420 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 19:49:51] 2025-07-28 17:11:30,420 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 19:49:51] 2025-07-28 17:11:30,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 19:49:51] 2025-07-28 17:11:30,421 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 19:49:51] 2025-07-28 17:11:30,426 | INFO     | fitting pss+swap vs Time
[2025-07-28 19:49:51] 2025-07-28 17:11:30,427 | INFO     | sum of square deviations: 5640782972.0
[2025-07-28 19:49:51] 2025-07-28 17:11:30,430 | INFO     | sum of deviations: 6522683212.999994
[2025-07-28 19:49:51] 2025-07-28 17:11:30,430 | INFO     | mean x: 1753714609.0
[2025-07-28 19:49:51] 2025-07-28 17:11:30,430 | INFO     | mean y: 2497990.661596958
[2025-07-28 19:49:51] 2025-07-28 17:11:30,430 | INFO     | -- intersect: -2025398650.1590576
[2025-07-28 19:49:51] 2025-07-28 17:11:30,430 | INFO     | intersect: -2025398650.1590576
[2025-07-28 19:49:51] 2025-07-28 17:11:30,431 | INFO     | chi2: 1.713652609170627
[2025-07-28 19:49:51] 2025-07-28 17:11:30,431 | INFO     | sum of square deviations: 5325139844.5
[2025-07-28 19:49:51] 2025-07-28 17:11:30,434 | INFO     | sum of deviations: 6321610742.999994
[2025-07-28 19:49:51] 2025-07-28 17:11:30,434 | INFO     | mean x: 1753714456.5
[2025-07-28 19:49:51] 2025-07-28 17:11:30,434 | INFO     | mean y: 2497893.503875969
[2025-07-28 19:49:51] 2025-07-28 17:11:30,434 | INFO     | -- intersect: -2079381732.589913
[2025-07-28 19:49:51] 2025-07-28 17:11:30,434 | INFO     | intersect: -2079381732.589913
[2025-07-28 19:49:51] 2025-07-28 17:11:30,435 | INFO     | chi2: 1.7138513833044728
[2025-07-28 19:49:51] 2025-07-28 17:11:30,435 | INFO     | current chi2=1.7138513833044728 (change=-0.011599441612733786 %)
[2025-07-28 19:49:51] 2025-07-28 17:11:30,435 | INFO     | right removable region: 257
[2025-07-28 19:49:51] 2025-07-28 17:11:30,436 | INFO     | sum of square deviations: 5325139844.5
[2025-07-28 19:49:51] 2025-07-28 17:11:30,438 | INFO     | sum of deviations: -36022058214.50001
[2025-07-28 19:49:51] 2025-07-28 17:11:30,438 | INFO     | mean x: 1753714761.5
[2025-07-28 19:49:51] 2025-07-28 17:11:30,438 | INFO     | mean y: 2518384.081395349
[2025-07-28 19:49:51] 2025-07-28 17:11:30,438 | INFO     | -- intersect: 11865571200.549267
[2025-07-28 19:49:51] 2025-07-28 17:11:30,438 | INFO     | intersect: 11865571200.549267
[2025-07-28 19:49:51] 2025-07-28 17:11:30,439 | INFO     | chi2: 0.1930286037376781
[2025-07-28 19:49:51] 2025-07-28 17:11:30,440 | INFO     | current chi2=0.1930286037376781 (change=88.73583813284654 %)
[2025-07-28 19:49:51] 2025-07-28 17:11:30,440 | INFO     | sum of square deviations: 5021496942.0
[2025-07-28 19:49:51] 2025-07-28 17:11:30,442 | INFO     | sum of deviations: -35614843838.99999
[2025-07-28 19:49:51] 2025-07-28 17:11:30,442 | INFO     | mean x: 1753714914.0
[2025-07-28 19:49:51] 2025-07-28 17:11:30,442 | INFO     | mean y: 2518153.4782608696
[2025-07-28 19:49:51] 2025-07-28 17:11:30,443 | INFO     | -- intersect: 12440698146.745157
[2025-07-28 19:49:51] 2025-07-28 17:11:30,443 | INFO     | intersect: 12440698146.745157
[2025-07-28 19:49:51] 2025-07-28 17:11:30,443 | INFO     | chi2: 0.17713588811486009
[2025-07-28 19:49:51] 2025-07-28 17:11:30,443 | INFO     | current chi2=0.17713588811486009 (change=8.233347449591404 %)
[2025-07-28 19:49:51] 2025-07-28 17:11:30,443 | INFO     | left removable region: 20
[2025-07-28 19:49:51] 2025-07-28 17:11:30,444 | INFO     | sum of square deviations: 4127772278.0
[2025-07-28 19:49:51] 2025-07-28 17:11:30,449 | INFO     | sum of deviations: -18114629113.0
[2025-07-28 19:49:51] 2025-07-28 17:11:30,450 | INFO     | mean x: 1753715036.0
[2025-07-28 19:49:51] 2025-07-28 17:11:30,450 | INFO     | mean y: 2509097.240506329
[2025-07-28 19:49:51] 2025-07-28 17:11:30,450 | INFO     | -- intersect: 7698645247.082502
[2025-07-28 19:49:51] 2025-07-28 17:11:30,450 | INFO     | intersect: 7698645247.082502
[2025-07-28 19:49:51] 2025-07-28 17:11:30,450 | INFO     | chi2: 0.1257179218839327
[2025-07-28 19:49:51] 2025-07-28 17:11:30,451 | INFO     | -- intersect: 7698645247.082502
[2025-07-28 19:49:51] 2025-07-28 17:11:30,451 | INFO     | current memory leak: -4.39 B/s (using 237 data points, chi2=0.13)
[2025-07-28 19:49:51] 2025-07-28 17:11:30,452 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-28 19:49:51] 2025-07-28 17:11:30,452 | INFO     | ..............................
[2025-07-28 19:49:51] 2025-07-28 17:11:30,452 | INFO     | . Timing measurements:
[2025-07-28 19:49:51] 2025-07-28 17:11:30,452 | INFO     | . get job = 0 s
[2025-07-28 19:49:51] 2025-07-28 17:11:30,453 | INFO     | . initial setup = 2 s
[2025-07-28 19:49:51] 2025-07-28 17:11:30,453 | INFO     | . payload setup = 13 s
[2025-07-28 19:49:51] 2025-07-28 17:11:30,453 | INFO     | . stage-in = 0 s
[2025-07-28 19:49:51] 2025-07-28 17:11:30,453 | INFO     | . payload execution = 16054 s
[2025-07-28 19:49:51] 2025-07-28 17:11:30,453 | INFO     | . stage-out = 1 s
[2025-07-28 19:49:51] 2025-07-28 17:11:30,453 | INFO     | . log creation = 0 s
[2025-07-28 19:49:51] 2025-07-28 17:11:30,453 | INFO     | ..............................
[2025-07-28 19:49:51] 2025-07-28 17:11:30,611 | INFO     | 
[2025-07-28 19:49:51] 2025-07-28 17:11:30,611 | INFO     | job summary report
[2025-07-28 19:49:51] 2025-07-28 17:11:30,611 | INFO     | --------------------------------------------------
[2025-07-28 19:49:51] 2025-07-28 17:11:30,611 | INFO     | PanDA job id: 6747626336
[2025-07-28 19:49:51] 2025-07-28 17:11:30,612 | INFO     | task id: 45743349
[2025-07-28 19:49:51] 2025-07-28 17:11:30,612 | INFO     | errors: (none)
[2025-07-28 19:49:51] 2025-07-28 17:11:30,612 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 19:49:51] 2025-07-28 17:11:30,612 | INFO     | pilot state: finished 
[2025-07-28 19:49:51] 2025-07-28 17:11:30,612 | INFO     | transexitcode: 0
[2025-07-28 19:49:51] 2025-07-28 17:11:30,612 | INFO     | exeerrorcode: 0
[2025-07-28 19:49:51] 2025-07-28 17:11:30,612 | INFO     | exeerrordiag: 
[2025-07-28 19:49:51] 2025-07-28 17:11:30,612 | INFO     | exitcode: 0
[2025-07-28 19:49:51] 2025-07-28 17:11:30,612 | INFO     | exitmsg: OK
[2025-07-28 19:49:51] 2025-07-28 17:11:30,612 | INFO     | cpuconsumptiontime: 61345 s
[2025-07-28 19:49:51] 2025-07-28 17:11:30,612 | INFO     | nevents: 400
[2025-07-28 19:49:51] 2025-07-28 17:11:30,613 | INFO     | neventsw: 0
[2025-07-28 19:49:51] 2025-07-28 17:11:30,613 | INFO     | pid: 22455
[2025-07-28 19:49:51] 2025-07-28 17:11:30,613 | INFO     | pgrp: 22455
[2025-07-28 19:49:51] 2025-07-28 17:11:30,613 | INFO     | corecount: 8
[2025-07-28 19:49:51] 2025-07-28 17:11:30,613 | INFO     | event service: False
[2025-07-28 19:49:51] 2025-07-28 17:11:30,613 | INFO     | sizes: {0: 2397475, 1: 2397475, 9: 2397765, 11: 2397793, 16071: 2428714, 16073: 2432146, 16074: 2432330, 16105: 2432524}
[2025-07-28 19:49:51] 2025-07-28 17:11:30,613 | INFO     | --------------------------------------------------
[2025-07-28 19:49:51] 2025-07-28 17:11:30,613 | INFO     | 
[2025-07-28 19:49:51] 2025-07-28 17:11:30,613 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-07-28 19:49:51] 2025-07-28 17:11:30,667 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,668 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,668 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,668 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,668 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,668 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,668 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,669 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,669 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,669 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,669 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,669 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,669 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,669 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,670 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,670 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,670 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,670 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 19:49:51] 2025-07-28 17:11:30,670 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,670 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 19:49:51] 2025-07-28 17:11:30,670 | INFO     | job 6747626336 has completed (purged errors)
[2025-07-28 19:49:51] 2025-07-28 17:11:30,670 | INFO     | overall cleanup function is called
[2025-07-28 19:49:51] 2025-07-28 17:11:31,678 | INFO     | --- collectZombieJob: --- 10, [22455]
[2025-07-28 19:49:51] 2025-07-28 17:11:31,678 | INFO     | zombie collector waiting for pid 22455
[2025-07-28 19:49:51] 2025-07-28 17:11:31,678 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 19:49:51] 2025-07-28 17:11:31,679 | INFO     | collected zombie processes
[2025-07-28 19:49:51] 2025-07-28 17:11:31,679 | INFO     | will attempt to kill all subprocesses of pid=22455
[2025-07-28 19:49:51] 2025-07-28 17:11:31,790 | INFO     | process IDs to be killed: [22455] (in reverse order)
[2025-07-28 19:49:51] 2025-07-28 17:11:31,860 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 19:49:51] 2025-07-28 17:11:31,861 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 19:49:51] 2025-07-28 17:11:31,864 | INFO     | did not find any defunct processes belonging to 22455
[2025-07-28 19:49:51] 2025-07-28 17:11:31,867 | INFO     | did not find any defunct processes belonging to 22455
[2025-07-28 19:49:51] 2025-07-28 17:11:31,868 | INFO     | ready for new job
[2025-07-28 19:49:51] 2025-07-28 17:11:31,868 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 19:49:51] 2025-07-28 17:11:31,870 | INFO     | ***************************************
[2025-07-28 19:49:51] 2025-07-28 17:11:31,870 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 19:49:51] 2025-07-28 17:11:31,870 | INFO     | ***************************************
[2025-07-28 19:49:51] 2025-07-28 17:11:31,870 | INFO     | 
[2025-07-28 19:49:51] 2025-07-28 17:11:31,871 | INFO     | pilot is running in a VM
[2025-07-28 19:49:51] 2025-07-28 17:11:31,871 | INFO     | architecture information:
[2025-07-28 19:49:51] 2025-07-28 17:11:31,871 | INFO     | executing command: cat /etc/os-release
[2025-07-28 19:49:51] 2025-07-28 17:11:31,898 | INFO     | cat /etc/os-release:
[2025-07-28 19:49:51] NAME="CentOS Linux"
[2025-07-28 19:49:51] VERSION="7 (Core)"
[2025-07-28 19:49:51] ID="centos"
[2025-07-28 19:49:51] ID_LIKE="rhel fedora"
[2025-07-28 19:49:51] VERSION_ID="7"
[2025-07-28 19:49:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 19:49:51] ANSI_COLOR="0;31"
[2025-07-28 19:49:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 19:49:51] HOME_URL="https://www.centos.org/"
[2025-07-28 19:49:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 19:49:51] 
[2025-07-28 19:49:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 19:49:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 19:49:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 19:49:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 19:49:51] 
[2025-07-28 19:49:51] 2025-07-28 17:11:31,899 | INFO     | ***************************************
[2025-07-28 19:49:51] 2025-07-28 17:11:32,401 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-07-28 19:49:51] 2025-07-28 17:11:32,420 | INFO     | sufficient remaining disk space (494808334336 B)
[2025-07-28 19:49:51] 2025-07-28 17:11:32,421 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 19:49:51] 2025-07-28 17:11:32,421 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 19:49:51] 2025-07-28 17:11:32,421 | INFO     | update_server=False
[2025-07-28 19:49:51] 2025-07-28 17:11:32,421 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 19:49:51] 2025-07-28 17:11:32,422 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 19:49:51] 2025-07-28 17:11:32,422 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 19:49:51] 2025-07-28 17:11:32,425 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 19:49:51] 2025-07-28 17:11:32,842 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 19:49:51] 2025-07-28 17:11:32,842 | INFO     | aborting loop
[2025-07-28 19:49:51] 2025-07-28 17:11:33,044 | INFO     | all data control threads have been joined
[2025-07-28 19:49:51] 2025-07-28 17:11:33,426 | INFO     | [job] queue monitor thread has finished
[2025-07-28 19:49:51] 2025-07-28 17:11:33,427 | INFO     | [job] retrieve thread has finished
[2025-07-28 19:49:51] 2025-07-28 17:11:33,439 | INFO     | all payload control threads have been joined
[2025-07-28 19:49:51] 2025-07-28 17:11:33,467 | INFO     | all job control threads have been joined
[2025-07-28 19:49:51] 2025-07-28 17:11:33,692 | INFO     | [payload] failed_post thread has finished
[2025-07-28 19:49:51] 2025-07-28 17:11:33,848 | INFO     | [job] job monitor thread has finished
[2025-07-28 19:49:51] 2025-07-28 17:11:33,881 | INFO     | [job] validate thread has finished
[2025-07-28 19:49:51] 2025-07-28 17:11:34,050 | INFO     | [data] control thread has finished
[2025-07-28 19:49:51] 2025-07-28 17:11:34,349 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 19:49:51] 2025-07-28 17:11:34,362 | INFO     | [payload] validate_post thread has finished
[2025-07-28 19:49:51] 2025-07-28 17:11:34,395 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 19:49:51] 2025-07-28 17:11:34,432 | INFO     | [data] copytool_out thread has finished
[2025-07-28 19:49:51] 2025-07-28 17:11:34,445 | INFO     | [payload] control thread has finished
[2025-07-28 19:49:51] 2025-07-28 17:11:34,473 | INFO     | [job] control thread has finished
[2025-07-28 19:49:51] 2025-07-28 17:11:34,662 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 19:49:51] 2025-07-28 17:11:34,897 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 19:49:51] 2025-07-28 17:11:34,902 | INFO     | [data] copytool_in thread has finished
[2025-07-28 19:49:51] 2025-07-28 17:11:36,430 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 19:49:51] 2025-07-28 17:11:38,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140545093363520)>', '<ExcThread(monitor, started 140544659408640)>']
[2025-07-28 19:49:51] 2025-07-28 17:11:43,255 | INFO     | all workflow threads have been joined
[2025-07-28 19:49:51] 2025-07-28 17:11:43,255 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 19:49:51] 2025-07-28 17:11:43,256 | INFO     | traces error code: 0
[2025-07-28 19:49:51] 2025-07-28 17:11:43,256 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 19:49:51] 2025-07-28 17:12:02,165 | INFO     | 16129s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-28 19:49:51] 2025-07-28 17:12:03,308 | INFO     | PID=15965 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-28 19:49:51] 2025-07-28 17:12:03,308 | INFO     | .. there are 9 such processes running
[2025-07-28 19:49:51] 2025-07-28 17:12:03,309 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 19:49:51] 2025-07-28 17:12:03,309 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 19:49:51] 2025-07-28 17:12:03,309 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 19:49:51] 2025-07-28 17:12:03,309 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 19:49:51] 2025-07-28 17:12:03,309 | INFO     | [monitor] control thread has ended
[2025-07-28 19:49:51] 2025-07-28 17:12:03,621 [wrapper] ==== pilot stdout END ====
[2025-07-28 19:49:51] 2025-07-28 17:12:03,668 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 19:49:51] 2025-07-28 17:12:03,731 [wrapper] pilotpid: 15965
[2025-07-28 19:49:51] 2025-07-28 17:12:03,776 [wrapper] Pilot exit status: 0
[2025-07-28 19:49:51] 2025-07-28 17:12:04,275 [wrapper] pandaids: 6747626336
[2025-07-28 19:49:51] 2025-07-28 17:12:05,212 [wrapper] cleanup supervisor_pilot 22796 15966
[2025-07-28 19:49:51] 2025-07-28 17:12:05,327 [wrapper] Test setup, not cleaning
[2025-07-28 19:49:51] 2025-07-28 17:12:05,437 [wrapper] apfmon messages muted
[2025-07-28 19:49:51] 2025-07-28 17:12:05,473 [wrapper] ==== wrapper stdout END ====
[2025-07-28 19:49:51] 2025-07-28 17:12:05,604 [wrapper] ==== wrapper stderr END ====
[2025-07-28 19:49:51]  *** Error codes and diagnostics ***
[2025-07-28 19:49:51]     "exeErrorCode": 0,
[2025-07-28 19:49:51]     "exeErrorDiag": "",
[2025-07-28 19:49:51]     "pilotErrorCode": 0,
[2025-07-28 19:49:51]     "pilotErrorDiag": "",
[2025-07-28 19:49:51]  *** Listing of results directory ***
[2025-07-28 19:49:51] total 350200
[2025-07-28 19:49:51] -rw-r--r--. 1 boinc boinc    530466 Jul 27 21:12 pilot3.tar.gz
[2025-07-28 19:49:51] -rw-r--r--. 1 boinc boinc      5112 Jul 27 21:15 queuedata.json
[2025-07-28 19:49:51] -rwx------. 1 boinc boinc     36292 Jul 27 21:18 runpilot2-wrapper.sh
[2025-07-28 19:49:51] -rw-r--r--. 1 boinc boinc       100 Jul 28 14:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 19:49:51] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 14:42 run_atlas
[2025-07-28 19:49:51] -rw-r--r--. 1 boinc boinc       105 Jul 28 14:42 job.xml
[2025-07-28 19:49:51] -rw-r--r--. 1 boinc boinc      6390 Jul 28 14:42 init_data.xml
[2025-07-28 19:49:51] -rw-r--r--. 2 boinc boinc 146628240 Jul 28 14:42 EVNT.45743347._002949.pool.root.1
[2025-07-28 19:49:51] -rw-r--r--. 2 boinc boinc     15095 Jul 28 14:42 start_atlas.sh
[2025-07-28 19:49:51] drwxrwx--x. 2 boinc boinc        68 Jul 28 14:42 shared
[2025-07-28 19:49:51] -rw-r--r--. 2 boinc boinc    542905 Jul 28 14:42 input.tar.gz
[2025-07-28 19:49:51] -rw-r--r--. 1 boinc boinc         0 Jul 28 14:42 boinc_lockfile
[2025-07-28 19:49:51] -rw-r--r--. 1 boinc boinc      2563 Jul 28 14:42 pandaJob.out
[2025-07-28 19:49:51] -rw-------. 1 boinc boinc    977006 Jul 28 14:42 agis_schedconf.cvmfs.json
[2025-07-28 19:49:51] drwx------. 4 boinc boinc      4096 Jul 28 14:42 pilot3
[2025-07-28 19:49:51] -rw-------. 1 boinc boinc 204553785 Jul 28 19:10 HITS.45743349._054438.pool.root.1
[2025-07-28 19:49:51] -rw-r--r--. 1 boinc boinc       531 Jul 28 19:10 boinc_task_state.xml
[2025-07-28 19:49:51] -rw-------. 1 boinc boinc      1034 Jul 28 19:10 memory_monitor_summary.json
[2025-07-28 19:49:51] -rw-------. 1 boinc boinc   1589827 Jul 28 19:10 agis_ddmendpoints.agis.ALL.json
[2025-07-28 19:49:51] -rw-------. 1 boinc boinc    402000 Jul 28 19:10 log.45743349._054438.job.log.tgz.1
[2025-07-28 19:49:51] -rw-------. 1 boinc boinc        95 Jul 28 19:11 pilot_heartbeat.json
[2025-07-28 19:49:51] -rw-------. 1 boinc boinc      7777 Jul 28 19:11 heartbeat.json
[2025-07-28 19:49:51] -rw-------. 1 boinc boinc       936 Jul 28 19:12 pilotlog.txt
[2025-07-28 19:49:51] -rw-------. 1 boinc boinc   1382162 Jul 28 19:12 log.45743349._054438.job.log.1
[2025-07-28 19:49:51] -rw-------. 1 boinc boinc       357 Jul 28 19:12 output.list
[2025-07-28 19:49:51] -rw-r--r--. 1 boinc boinc       620 Jul 28 19:12 runtime_log
[2025-07-28 19:49:51] -rw-------. 1 boinc boinc   1802240 Jul 28 19:12 result.tar.gz
[2025-07-28 19:49:51] -rw-------. 1 boinc boinc       656 Jul 28 19:12 UDkNDmx3L07n9Rq4apOajLDm4fhM0noT9bVof3QYDme02KDmg0XUIo.diag
[2025-07-28 19:49:51] -rw-r--r--. 1 boinc boinc      8660 Jul 28 19:12 runtime_log.err
[2025-07-28 19:49:51] -rw-r--r--. 1 boinc boinc      8192 Jul 28 19:49 boinc_mmap_file
[2025-07-28 19:49:51] -rw-r--r--. 1 boinc boinc        28 Jul 28 19:49 wrapper_checkpoint.txt
[2025-07-28 19:49:51] -rw-r--r--. 1 boinc boinc     20818 Jul 28 19:49 stderr.txt
[2025-07-28 19:49:51] HITS file was successfully produced:
[2025-07-28 19:49:51] -rw-------. 1 boinc boinc 204553785 Jul 28 19:10 shared/HITS.pool.root.1
[2025-07-28 19:49:51]  *** Contents of shared directory: ***
[2025-07-28 19:49:51] total 345260
[2025-07-28 19:49:51] -rw-r--r--. 2 boinc boinc 146628240 Jul 28 14:42 ATLAS.root_0
[2025-07-28 19:49:51] -rw-r--r--. 2 boinc boinc     15095 Jul 28 14:42 start_atlas.sh
[2025-07-28 19:49:51] -rw-r--r--. 2 boinc boinc    542905 Jul 28 14:42 input.tar.gz
[2025-07-28 19:49:51] -rw-------. 1 boinc boinc 204553785 Jul 28 19:10 HITS.pool.root.1
[2025-07-28 19:49:51] -rw-------. 1 boinc boinc   1802240 Jul 28 19:12 result.tar.gz
19:49:53 (12303): run_atlas exited; CPU time 61534.729432
19:49:53 (12303): called boinc_finish(0)

</stderr_txt>
]]>

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