Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:53:33 (3375741): wrapper (7.7.26015): starting
17:53:33 (3375741): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 17:53:33] Arguments: --nthreads 8
[2025-07-27 17:53:33] Threads: 8
[2025-07-27 17:53:33] Checking for CVMFS
[2025-07-27 17:53:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:53:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:53:34] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:53:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:53:35] 2.13.1.0 87270 8746 225132 148825 0 695 23545621 40960001 19703 16776704 0 23550103 99.820 16480675 35700 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 17:53:35] CVMFS is ok
[2025-07-27 17:53:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:53:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:53:35] Further information can be found at the LHC@home message board.
[2025-07-27 17:53:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:53:35] Checking for apptainer binary...
[2025-07-27 17:53:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:53:35] Running /usr/bin/apptainer --version
[2025-07-27 17:53:36] apptainer version 1.4.1-1.el9
[2025-07-27 17:53:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:53:36] c-211-33-3.aglt2.org
[2025-07-27 17:53:36] apptainer works
[2025-07-27 17:53:36] Set ATHENA_PROC_NUMBER=8
[2025-07-27 17:53:36] Set ATHENA_CORE_NUMBER=8
[2025-07-27 17:53:36] Starting ATLAS job with PandaID=6745059658
[2025-07-27 17:53:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:36:55]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:36:55] 2025-07-28 00:36:20,298 | INFO     | sum of square deviations: 1110642544.9411738
[2025-07-27 20:36:55] 2025-07-28 00:36:20,299 | INFO     | sum of deviations: 33325627221.64706
[2025-07-27 20:36:55] 2025-07-28 00:36:20,299 | INFO     | mean x: 1753657965.3529413
[2025-07-27 20:36:55] 2025-07-28 00:36:20,300 | INFO     | mean y: 2485569.7843137253
[2025-07-27 20:36:55] 2025-07-28 00:36:20,300 | INFO     | -- intersect: -52617281153.378265
[2025-07-27 20:36:55] 2025-07-28 00:36:20,300 | INFO     | intersect: -52617281153.378265
[2025-07-27 20:36:55] 2025-07-28 00:36:20,300 | INFO     | chi2: 1.5448374219686851
[2025-07-27 20:36:55] 2025-07-28 00:36:20,300 | INFO     | current chi2=1.5448374219686851 (change=0.04830609512255461 %)
[2025-07-27 20:36:55] 2025-07-28 00:36:20,300 | INFO     | right removable region: 152
[2025-07-27 20:36:55] 2025-07-28 00:36:20,300 | INFO     | sum of square deviations: 1110636813.7647018
[2025-07-27 20:36:55] 2025-07-28 00:36:20,301 | INFO     | sum of deviations: 8667613899.196068
[2025-07-27 20:36:55] 2025-07-28 00:36:20,301 | INFO     | mean x: 1753658270.372549
[2025-07-27 20:36:55] 2025-07-28 00:36:20,301 | INFO     | mean y: 2521294.522875817
[2025-07-27 20:36:55] 2025-07-28 00:36:20,301 | INFO     | -- intersect: -13683350279.640072
[2025-07-27 20:36:55] 2025-07-28 00:36:20,301 | INFO     | intersect: -13683350279.640072
[2025-07-27 20:36:55] 2025-07-28 00:36:20,302 | INFO     | chi2: 0.024666524995133266
[2025-07-27 20:36:55] 2025-07-28 00:36:20,302 | INFO     | current chi2=0.024666524995133266 (change=98.40406445302919 %)
[2025-07-27 20:36:55] 2025-07-28 00:36:20,302 | INFO     | sum of square deviations: 1005259313.047297
[2025-07-27 20:36:55] 2025-07-28 00:36:20,303 | INFO     | sum of deviations: 4791433297.790542
[2025-07-27 20:36:55] 2025-07-28 00:36:20,303 | INFO     | mean x: 1753658422.8851352
[2025-07-27 20:36:55] 2025-07-28 00:36:20,303 | INFO     | mean y: 2526905.222972973
[2025-07-27 20:36:55] 2025-07-28 00:36:20,303 | INFO     | -- intersect: -8356050082.133271
[2025-07-27 20:36:55] 2025-07-28 00:36:20,303 | INFO     | intersect: -8356050082.133271
[2025-07-27 20:36:55] 2025-07-28 00:36:20,303 | INFO     | chi2: 0.008854173831066674
[2025-07-27 20:36:55] 2025-07-28 00:36:20,304 | INFO     | current chi2=0.008854173831066674 (change=64.10449452116335 %)
[2025-07-27 20:36:55] 2025-07-28 00:36:20,304 | INFO     | sum of square deviations: 906783839.8461545
[2025-07-27 20:36:55] 2025-07-28 00:36:20,305 | INFO     | sum of deviations: 2614640255.8461537
[2025-07-27 20:36:55] 2025-07-28 00:36:20,305 | INFO     | mean x: 1753658575.3846154
[2025-07-27 20:36:55] 2025-07-28 00:36:20,305 | INFO     | mean y: 2530250.111888112
[2025-07-27 20:36:55] 2025-07-28 00:36:20,305 | INFO     | -- intersect: -5054007046.56993
[2025-07-27 20:36:55] 2025-07-28 00:36:20,305 | INFO     | intersect: -5054007046.56993
[2025-07-27 20:36:55] 2025-07-28 00:36:20,305 | INFO     | chi2: 0.002308956711742333
[2025-07-27 20:36:55] 2025-07-28 00:36:20,305 | INFO     | current chi2=0.002308956711742333 (change=73.92239235646258 %)
[2025-07-27 20:36:55] 2025-07-28 00:36:20,305 | INFO     | sum of square deviations: 814942086.5797083
[2025-07-27 20:36:55] 2025-07-28 00:36:20,306 | INFO     | sum of deviations: 1871273104.8695662
[2025-07-27 20:36:55] 2025-07-28 00:36:20,306 | INFO     | mean x: 1753658727.8985507
[2025-07-27 20:36:55] 2025-07-28 00:36:20,306 | INFO     | mean y: 2531485.347826087
[2025-07-27 20:36:55] 2025-07-28 00:36:20,306 | INFO     | -- intersect: -4024226325.6384993
[2025-07-27 20:36:55] 2025-07-28 00:36:20,306 | INFO     | intersect: -4024226325.6384993
[2025-07-27 20:36:55] 2025-07-28 00:36:20,307 | INFO     | chi2: 0.0017824697171544698
[2025-07-27 20:36:55] 2025-07-28 00:36:20,307 | INFO     | current chi2=0.0017824697171544698 (change=22.801943055510016 %)
[2025-07-27 20:36:55] 2025-07-28 00:36:20,307 | INFO     | left removable region: 40
[2025-07-27 20:36:55] 2025-07-28 00:36:20,307 | INFO     | sum of square deviations: 435607263.42857164
[2025-07-27 20:36:55] 2025-07-28 00:36:20,308 | INFO     | sum of deviations: 137046747.21428555
[2025-07-27 20:36:55] 2025-07-28 00:36:20,308 | INFO     | mean x: 1753659154.9285715
[2025-07-27 20:36:55] 2025-07-28 00:36:20,308 | INFO     | mean y: 2535421.776785714
[2025-07-27 20:36:55] 2025-07-28 00:36:20,308 | INFO     | -- intersect: -549184678.1451064
[2025-07-27 20:36:55] 2025-07-28 00:36:20,308 | INFO     | intersect: -549184678.1451064
[2025-07-27 20:36:55] 2025-07-28 00:36:20,308 | INFO     | chi2: 0.00042023991437909126
[2025-07-27 20:36:55] 2025-07-28 00:36:20,308 | INFO     | -- intersect: -549184678.1451064
[2025-07-27 20:36:55] 2025-07-28 00:36:20,308 | INFO     | current memory leak: 0.31 B/s (using 112 data points, chi2=0.00)
[2025-07-27 20:36:55] 2025-07-28 00:36:20,309 | INFO     | could have reported an average CPU frequency of 2523 MHz (9 samples)
[2025-07-27 20:36:55] 2025-07-28 00:36:20,309 | INFO     | ..............................
[2025-07-27 20:36:55] 2025-07-28 00:36:20,309 | INFO     | . Timing measurements:
[2025-07-27 20:36:55] 2025-07-28 00:36:20,309 | INFO     | . get job = 0 s
[2025-07-27 20:36:55] 2025-07-28 00:36:20,309 | INFO     | . initial setup = 4 s
[2025-07-27 20:36:55] 2025-07-28 00:36:20,309 | INFO     | . payload setup = 22 s
[2025-07-27 20:36:55] 2025-07-28 00:36:20,309 | INFO     | . stage-in = 0 s
[2025-07-27 20:36:55] 2025-07-28 00:36:20,309 | INFO     | . payload execution = 9638 s
[2025-07-27 20:36:55] 2025-07-28 00:36:20,309 | INFO     | . stage-out = 2 s
[2025-07-27 20:36:55] 2025-07-28 00:36:20,310 | INFO     | . log creation = 0 s
[2025-07-27 20:36:55] 2025-07-28 00:36:20,310 | INFO     | ..............................
[2025-07-27 20:36:55] 2025-07-28 00:36:20,409 | INFO     | 
[2025-07-27 20:36:55] 2025-07-28 00:36:20,409 | INFO     | job summary report
[2025-07-27 20:36:55] 2025-07-28 00:36:20,410 | INFO     | --------------------------------------------------
[2025-07-27 20:36:55] 2025-07-28 00:36:20,410 | INFO     | PanDA job id: 6745059658
[2025-07-27 20:36:55] 2025-07-28 00:36:20,410 | INFO     | task id: 45743349
[2025-07-27 20:36:55] 2025-07-28 00:36:20,410 | INFO     | errors: (none)
[2025-07-27 20:36:55] 2025-07-28 00:36:20,410 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:36:55] 2025-07-28 00:36:20,410 | INFO     | pilot state: finished 
[2025-07-27 20:36:55] 2025-07-28 00:36:20,410 | INFO     | transexitcode: 0
[2025-07-27 20:36:55] 2025-07-28 00:36:20,410 | INFO     | exeerrorcode: 0
[2025-07-27 20:36:55] 2025-07-28 00:36:20,410 | INFO     | exeerrordiag: 
[2025-07-27 20:36:55] 2025-07-28 00:36:20,410 | INFO     | exitcode: 0
[2025-07-27 20:36:55] 2025-07-28 00:36:20,410 | INFO     | exitmsg: OK
[2025-07-27 20:36:55] 2025-07-28 00:36:20,410 | INFO     | cpuconsumptiontime: 56357 s
[2025-07-27 20:36:55] 2025-07-28 00:36:20,411 | INFO     | nevents: 400
[2025-07-27 20:36:55] 2025-07-28 00:36:20,411 | INFO     | neventsw: 0
[2025-07-27 20:36:55] 2025-07-28 00:36:20,411 | INFO     | pid: 3386093
[2025-07-27 20:36:55] 2025-07-28 00:36:20,411 | INFO     | pgrp: 3386093
[2025-07-27 20:36:55] 2025-07-28 00:36:20,411 | INFO     | corecount: 8
[2025-07-27 20:36:55] 2025-07-28 00:36:20,411 | INFO     | event service: False
[2025-07-27 20:36:55] 2025-07-28 00:36:20,411 | INFO     | sizes: {0: 2396645, 1: 2397501, 2: 2397501, 13: 2397529, 15: 2397847, 24: 2397875, 9665: 2426485, 9668: 2435483, 9669: 2435539, 9686: 2435797}
[2025-07-27 20:36:55] 2025-07-28 00:36:20,411 | INFO     | --------------------------------------------------
[2025-07-27 20:36:55] 2025-07-28 00:36:20,411 | INFO     | 
[2025-07-27 20:36:55] 2025-07-28 00:36:20,411 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 20:36:55] 2025-07-28 00:36:20,481 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,482 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,482 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,482 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,482 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,483 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,483 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,483 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,483 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,483 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,483 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,483 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,483 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,483 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,483 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,484 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,484 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,484 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:36:55] 2025-07-28 00:36:20,484 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,484 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:36:55] 2025-07-28 00:36:20,484 | INFO     | job 6745059658 has completed (purged errors)
[2025-07-27 20:36:55] 2025-07-28 00:36:20,484 | INFO     | overall cleanup function is called
[2025-07-27 20:36:55] 2025-07-28 00:36:21,521 | INFO     | --- collectZombieJob: --- 10, [3386093]
[2025-07-27 20:36:55] 2025-07-28 00:36:21,521 | INFO     | zombie collector waiting for pid 3386093
[2025-07-27 20:36:55] 2025-07-28 00:36:21,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:36:55] 2025-07-28 00:36:21,522 | INFO     | collected zombie processes
[2025-07-27 20:36:55] 2025-07-28 00:36:21,522 | INFO     | will attempt to kill all subprocesses of pid=3386093
[2025-07-27 20:36:55] 2025-07-28 00:36:21,572 | INFO     | PID=3379436 has CPU usage=12.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 20:36:55] 2025-07-28 00:36:21,572 | INFO     | .. there are 15 such processes running
[2025-07-27 20:36:55] 2025-07-28 00:36:22,178 | INFO     | process IDs to be killed: [3386093] (in reverse order)
[2025-07-27 20:36:55] 2025-07-28 00:36:22,337 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:36:55] 2025-07-28 00:36:22,338 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:36:55] 2025-07-28 00:36:22,364 | INFO     | did not find any defunct processes belonging to 3386093
[2025-07-27 20:36:55] 2025-07-28 00:36:22,390 | INFO     | did not find any defunct processes belonging to 3386093
[2025-07-27 20:36:55] 2025-07-28 00:36:22,390 | INFO     | ready for new job
[2025-07-27 20:36:55] 2025-07-28 00:36:22,391 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:36:55] 2025-07-28 00:36:22,398 | INFO     | ***************************************
[2025-07-27 20:36:55] 2025-07-28 00:36:22,398 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:36:55] 2025-07-28 00:36:22,398 | INFO     | ***************************************
[2025-07-27 20:36:55] 2025-07-28 00:36:22,398 | INFO     | 
[2025-07-27 20:36:55] 2025-07-28 00:36:22,412 | INFO     | architecture information:
[2025-07-27 20:36:55] 2025-07-28 00:36:22,415 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:36:55] 2025-07-28 00:36:22,528 | INFO     | cat /etc/os-release:
[2025-07-27 20:36:55] NAME="CentOS Linux"
[2025-07-27 20:36:55] VERSION="7 (Core)"
[2025-07-27 20:36:55] ID="centos"
[2025-07-27 20:36:55] ID_LIKE="rhel fedora"
[2025-07-27 20:36:55] VERSION_ID="7"
[2025-07-27 20:36:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:36:55] ANSI_COLOR="0;31"
[2025-07-27 20:36:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:36:55] HOME_URL="https://www.centos.org/"
[2025-07-27 20:36:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:36:55] 
[2025-07-27 20:36:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:36:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:36:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:36:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:36:55] 
[2025-07-27 20:36:55] 2025-07-28 00:36:22,529 | INFO     | ***************************************
[2025-07-27 20:36:55] 2025-07-28 00:36:23,035 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 20:36:55] 2025-07-28 00:36:23,160 | INFO     | sufficient remaining disk space (128743112704 B)
[2025-07-27 20:36:55] 2025-07-28 00:36:23,160 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:36:55] 2025-07-28 00:36:23,161 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:36:55] 2025-07-28 00:36:23,161 | INFO     | update_server=False
[2025-07-27 20:36:55] 2025-07-28 00:36:23,161 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:36:55] 2025-07-28 00:36:23,162 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:36:55] 2025-07-28 00:36:23,170 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:36:55] 2025-07-28 00:36:23,323 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 20:36:55] 2025-07-28 00:36:23,324 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 20:36:55] 2025-07-28 00:36:23,324 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:36:55] 2025-07-28 00:36:23,324 | INFO     | will abort loop
[2025-07-27 20:36:55] 2025-07-28 00:36:23,477 | INFO     | all data control threads have been joined
[2025-07-27 20:36:55] 2025-07-28 00:36:24,173 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:36:55] 2025-07-28 00:36:24,203 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:36:55] 2025-07-28 00:36:24,203 | INFO     | all job control threads have been joined
[2025-07-27 20:36:55] 2025-07-28 00:36:24,223 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:36:55] 2025-07-28 00:36:24,330 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:36:55] 2025-07-28 00:36:24,454 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:36:55] 2025-07-28 00:36:24,479 | INFO     | all payload control threads have been joined
[2025-07-27 20:36:55] 2025-07-28 00:36:24,481 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:36:55] 2025-07-28 00:36:24,483 | INFO     | [data] control thread has finished
[2025-07-27 20:36:55] 2025-07-28 00:36:24,617 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:36:55] 2025-07-28 00:36:25,036 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:36:55] 2025-07-28 00:36:25,169 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:36:55] 2025-07-28 00:36:25,215 | INFO     | [job] control thread has finished
[2025-07-27 20:36:55] 2025-07-28 00:36:25,346 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:36:55] 2025-07-28 00:36:25,447 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:36:55] 2025-07-28 00:36:25,456 | INFO     | [job] validate thread has finished
[2025-07-27 20:36:55] 2025-07-28 00:36:25,485 | INFO     | [payload] control thread has finished
[2025-07-27 20:36:55] 2025-07-28 00:36:26,453 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:36:55] 2025-07-28 00:36:27,182 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:36:55] 2025-07-28 00:36:28,789 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140150566479680)>', '<ExcThread(monitor, started 140150084466432)>']
[2025-07-27 20:36:55] 2025-07-28 00:36:33,815 | INFO     | all workflow threads have been joined
[2025-07-27 20:36:55] 2025-07-28 00:36:33,816 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:36:55] 2025-07-28 00:36:33,816 | INFO     | traces error code: 0
[2025-07-27 20:36:55] 2025-07-28 00:36:33,816 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:36:55] 2025-07-28 00:36:54,429 | INFO     | PID=3379436 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 20:36:55] 2025-07-28 00:36:54,430 | INFO     | .. there are 15 such processes running
[2025-07-27 20:36:55] 2025-07-28 00:36:54,431 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:36:55] 2025-07-28 00:36:54,431 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:36:55] 2025-07-28 00:36:54,431 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:36:55] 2025-07-28 00:36:54,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:36:55] 2025-07-28 00:36:54,431 | INFO     | [monitor] control thread has ended
[2025-07-27 20:36:55] 2025-07-28 00:36:54,710 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:36:55] 2025-07-28 00:36:54,735 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:36:55] 2025-07-28 00:36:54,761 [wrapper] pilotpid: 3379436
[2025-07-27 20:36:55] 2025-07-28 00:36:54,783 [wrapper] Pilot exit status: 0
[2025-07-27 20:36:55] 2025-07-28 00:36:54,928 [wrapper] pandaids: 6745059658
[2025-07-27 20:36:55] 2025-07-28 00:36:55,718 [wrapper] cleanup supervisor_pilot 3585263 3379437
[2025-07-27 20:36:55] 2025-07-28 00:36:55,749 [wrapper] Test setup, not cleaning
[2025-07-27 20:36:55] 2025-07-28 00:36:55,754 [wrapper] apfmon messages muted
[2025-07-27 20:36:55] 2025-07-28 00:36:55,757 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:36:55] 2025-07-28 00:36:55,761 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:36:55]  *** Error codes and diagnostics ***
[2025-07-27 20:36:55]     "exeErrorCode": 0,
[2025-07-27 20:36:55]     "exeErrorDiag": "",
[2025-07-27 20:36:55]     "pilotErrorCode": 0,
[2025-07-27 20:36:55]     "pilotErrorDiag": "",
[2025-07-27 20:36:55]  *** Listing of results directory ***
[2025-07-27 20:36:55] total 435128
[2025-07-27 20:36:55] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 13:56 pilot3.tar.gz
[2025-07-27 20:36:55] -rwx------. 1 boincer umatlas     36292 Jul 25 14:11 runpilot2-wrapper.sh
[2025-07-27 20:36:55] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 14:11 queuedata.json
[2025-07-27 20:36:55] -rw-r--r--. 1 boincer umatlas       100 Jul 27 17:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:36:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 17:53 run_atlas
[2025-07-27 20:36:55] -rw-r--r--. 1 boincer umatlas       105 Jul 27 17:53 job.xml
[2025-07-27 20:36:55] -rw-r--r--. 2 boincer umatlas 226894198 Jul 27 17:53 EVNT.45743347._001412.pool.root.1
[2025-07-27 20:36:55] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:53 start_atlas.sh
[2025-07-27 20:36:55] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 17:53 shared
[2025-07-27 20:36:55] -rw-r--r--. 2 boincer umatlas    542884 Jul 27 17:53 input.tar.gz
[2025-07-27 20:36:55] -rw-r--r--. 1 boincer umatlas         0 Jul 27 17:53 boinc_lockfile
[2025-07-27 20:36:55] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 17:53 pandaJob.out
[2025-07-27 20:36:55] -rw-------. 1 boincer umatlas    980117 Jul 27 17:54 agis_schedconf.cvmfs.json
[2025-07-27 20:36:55] -rw-------. 1 boincer umatlas   1593052 Jul 27 17:54 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:36:55] drwx------. 4 boincer umatlas      4096 Jul 27 17:54 pilot3
[2025-07-27 20:36:55] -rw-r--r--. 1 boincer umatlas      6857 Jul 27 20:27 init_data.xml
[2025-07-27 20:36:55] -rw-------. 1 boincer umatlas 212354941 Jul 27 20:35 HITS.45743349._024950.pool.root.1
[2025-07-27 20:36:55] -rw-r--r--. 1 boincer umatlas       530 Jul 27 20:35 boinc_task_state.xml
[2025-07-27 20:36:55] -rw-------. 1 boincer umatlas      1039 Jul 27 20:35 memory_monitor_summary.json
[2025-07-27 20:36:55] -rw-------. 1 boincer umatlas    369735 Jul 27 20:36 log.45743349._024950.job.log.tgz.1
[2025-07-27 20:36:55] -rw-------. 1 boincer umatlas      7822 Jul 27 20:36 heartbeat.json
[2025-07-27 20:36:55] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 20:36 boinc_mmap_file
[2025-07-27 20:36:55] -rw-r--r--. 1 boincer umatlas        27 Jul 27 20:36 wrapper_checkpoint.txt
[2025-07-27 20:36:55] -rw-------. 1 boincer umatlas        95 Jul 27 20:36 pilot_heartbeat.json
[2025-07-27 20:36:55] -rw-------. 1 boincer umatlas       823 Jul 27 20:36 pilotlog.txt
[2025-07-27 20:36:55] -rw-------. 1 boincer umatlas    851320 Jul 27 20:36 log.45743349._024950.job.log.1
[2025-07-27 20:36:55] -rw-------. 1 boincer umatlas       357 Jul 27 20:36 output.list
[2025-07-27 20:36:55] -rw-r--r--. 1 boincer umatlas       620 Jul 27 20:36 runtime_log
[2025-07-27 20:36:55] -rw-------. 1 boincer umatlas   1239040 Jul 27 20:36 result.tar.gz
[2025-07-27 20:36:55] -rw-r--r--. 1 boincer umatlas      8670 Jul 27 20:36 runtime_log.err
[2025-07-27 20:36:55] -rw-------. 1 boincer umatlas       654 Jul 27 20:36 CayNDmc4bz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmWMzKDman7EFm.diag
[2025-07-27 20:36:55] -rw-r--r--. 1 boincer umatlas     21224 Jul 27 20:36 stderr.txt
[2025-07-27 20:36:56] HITS file was successfully produced:
[2025-07-27 20:36:56] -rw-------. 1 boincer umatlas 212354941 Jul 27 20:35 shared/HITS.pool.root.1
[2025-07-27 20:36:56]  *** Contents of shared directory: ***
[2025-07-27 20:36:56] total 430728
[2025-07-27 20:36:56] -rw-r--r--. 2 boincer umatlas 226894198 Jul 27 17:53 ATLAS.root_0
[2025-07-27 20:36:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:53 start_atlas.sh
[2025-07-27 20:36:56] -rw-r--r--. 2 boincer umatlas    542884 Jul 27 17:53 input.tar.gz
[2025-07-27 20:36:56] -rw-------. 1 boincer umatlas 212354941 Jul 27 20:35 HITS.pool.root.1
[2025-07-27 20:36:56] -rw-------. 1 boincer umatlas   1239040 Jul 27 20:36 result.tar.gz
20:36:57 (3375741): run_atlas exited; CPU time 56649.895334
20:36:57 (3375741): called boinc_finish(0)

</stderr_txt>
]]>

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