Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:34:31 (711927): wrapper (7.7.26015): starting
17:34:31 (711927): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 17:34:31] Arguments: --nthreads 10
[2025-07-27 17:34:31] Threads: 10
[2025-07-27 17:34:31] Checking for CVMFS
[2025-07-27 17:34:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:34:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:34:31] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:34:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:34:31] 2.13.1.0 158023 7233 148808 148825 3 65 36568837 39288833 5057 16776704 0 6834763 99.635 8884888 39442 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 17:34:31] CVMFS is ok
[2025-07-27 17:34:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:34:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:34:31] Further information can be found at the LHC@home message board.
[2025-07-27 17:34:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:34:31] Checking for apptainer binary...
[2025-07-27 17:34:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:34:31] Running /usr/bin/apptainer --version
[2025-07-27 17:34:31] apptainer version 1.4.1-1.el9
[2025-07-27 17:34:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:34:31] c-210-6.aglt2.org
[2025-07-27 17:34:31] apptainer works
[2025-07-27 17:34:31] Set ATHENA_PROC_NUMBER=10
[2025-07-27 17:34:31] Set ATHENA_CORE_NUMBER=10
[2025-07-27 17:34:31] Starting ATLAS job with PandaID=6747525754
[2025-07-27 17:34:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:12:01]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:12:01]  is_altstaged=None
[2025-07-27 19:12:01]  is_tar=False
[2025-07-27 19:12:01]  lfn=log.45743349._052301.job.log.tgz.1
[2025-07-27 19:12:01]  mtime=0
[2025-07-27 19:12:01]  protocol_id=None
[2025-07-27 19:12:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 19:12:01]  replicas=None
[2025-07-27 19:12:01]  scope=mc23_13p6TeV
[2025-07-27 19:12:01]  status=None
[2025-07-27 19:12:01]  status_code=0
[2025-07-27 19:12:01]  storage_token=
[2025-07-27 19:12:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747525754/log.45743349._052301.job.log.tgz.1
[2025-07-27 19:12:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/ed/log.45743349._052301.job.log.tgz.1
[2025-07-27 19:12:01]  workdir=None
[2025-07-27 19:12:01] ]
[2025-07-27 19:12:01] 2025-07-27 23:11:19,512 | INFO     | transferring file log.45743349._052301.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747525754/log.45743349._052301.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 19:12:01] 2025-07-27 23:11:19,513 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747525754/log.45743349._052301.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._052301.job
[2025-07-27 19:12:01] 2025-07-27 23:11:19,532 | INFO     | adding to output.list: log.45743349._052301.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/ed/log.45743349._052301.job.log.tg
[2025-07-27 19:12:01] 2025-07-27 23:11:19,533 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 19:12:01] 2025-07-27 23:11:19,533 | INFO     | summary of transferred files:
[2025-07-27 19:12:01] 2025-07-27 23:11:19,533 | INFO     |  -- lfn=log.45743349._052301.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:12:01] 2025-07-27 23:11:19,533 | INFO     | stage-out finished correctly
[2025-07-27 19:12:01] 2025-07-27 23:11:20,945 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:12:01] 2025-07-27 23:11:22,426 | INFO     | job 6747525754 has state=finished
[2025-07-27 19:12:01] 2025-07-27 23:11:22,427 | INFO     | preparing for final server update for job 6747525754 in state='finished'
[2025-07-27 19:12:01] 2025-07-27 23:11:22,427 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:12:01] 2025-07-27 23:11:22,427 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:12:01] 2025-07-27 23:11:22,427 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:12:01] 2025-07-27 23:11:22,428 | INFO     | job 6747525754 has finished - writing final server update
[2025-07-27 19:12:01] 2025-07-27 23:11:22,428 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:12:01] 2025-07-27 23:11:22,429 | INFO     | executing command: lscpu
[2025-07-27 19:12:01] 2025-07-27 23:11:22,470 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:12:01] 2025-07-27 23:11:25,130 | WARNING  | process 722332 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 19:12:01] 2025-07-27 23:11:25,130 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747525754/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:12:01] 2025-07-27 23:11:25,349 | INFO     | number of running child processes to parent process 722332: 1
[2025-07-27 19:12:01] 2025-07-27 23:11:25,349 | INFO     | maximum number of monitored processes: 6
[2025-07-27 19:12:01] 2025-07-27 23:11:27,670 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 19:12:01] 2025-07-27 23:11:27,677 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.181675
[2025-07-27 19:12:01] 2025-07-27 23:11:27,682 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747525754/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:12:01] 2025-07-27 23:11:27,683 | INFO     | extracted standard info from prmon json
[2025-07-27 19:12:01] 2025-07-27 23:11:27,683 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:12:01] 2025-07-27 23:11:27,683 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:12:01] 2025-07-27 23:11:27,683 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:12:01] 2025-07-27 23:11:27,684 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:12:01] 2025-07-27 23:11:27,686 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:12:01] 2025-07-27 23:11:27,686 | INFO     | sum of square deviations: 211285822.0
[2025-07-27 19:12:01] 2025-07-27 23:11:27,687 | INFO     | sum of deviations: -17175510719.5
[2025-07-27 19:12:01] 2025-07-27 23:11:27,687 | INFO     | mean x: 1753655068.5
[2025-07-27 19:12:01] 2025-07-27 23:11:27,687 | INFO     | mean y: 2781758.5568181816
[2025-07-27 19:12:01] 2025-07-27 23:11:27,687 | INFO     | -- intersect: 142558118137.57452
[2025-07-27 19:12:01] 2025-07-27 23:11:27,687 | INFO     | intersect: 142558118137.57452
[2025-07-27 19:12:01] 2025-07-27 23:11:27,687 | INFO     | chi2: 0.14146018521057702
[2025-07-27 19:12:01] 2025-07-27 23:11:27,688 | INFO     | -- intersect: 142558118137.57452
[2025-07-27 19:12:01] 2025-07-27 23:11:27,688 | INFO     | current memory leak: -81.29 B/s (using 88 data points, chi2=0.14)
[2025-07-27 19:12:01] 2025-07-27 23:11:27,688 | INFO     | could have reported an average CPU frequency of 2594 MHz (7 samples)
[2025-07-27 19:12:01] 2025-07-27 23:11:27,688 | INFO     | ..............................
[2025-07-27 19:12:01] 2025-07-27 23:11:27,688 | INFO     | . Timing measurements:
[2025-07-27 19:12:01] 2025-07-27 23:11:27,689 | INFO     | . get job = 0 s
[2025-07-27 19:12:01] 2025-07-27 23:11:27,689 | INFO     | . initial setup = 3 s
[2025-07-27 19:12:01] 2025-07-27 23:11:27,689 | INFO     | . payload setup = 7 s
[2025-07-27 19:12:01] 2025-07-27 23:11:27,689 | INFO     | . stage-in = 0 s
[2025-07-27 19:12:01] 2025-07-27 23:11:27,689 | INFO     | . payload execution = 5769 s
[2025-07-27 19:12:01] 2025-07-27 23:11:27,689 | INFO     | . stage-out = 0 s
[2025-07-27 19:12:01] 2025-07-27 23:11:27,689 | INFO     | . log creation = 0 s
[2025-07-27 19:12:01] 2025-07-27 23:11:27,689 | INFO     | ..............................
[2025-07-27 19:12:01] 2025-07-27 23:11:27,785 | INFO     | 
[2025-07-27 19:12:01] 2025-07-27 23:11:27,785 | INFO     | job summary report
[2025-07-27 19:12:01] 2025-07-27 23:11:27,785 | INFO     | --------------------------------------------------
[2025-07-27 19:12:01] 2025-07-27 23:11:27,785 | INFO     | PanDA job id: 6747525754
[2025-07-27 19:12:01] 2025-07-27 23:11:27,785 | INFO     | task id: 45743349
[2025-07-27 19:12:01] 2025-07-27 23:11:27,785 | INFO     | errors: (none)
[2025-07-27 19:12:01] 2025-07-27 23:11:27,786 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:12:01] 2025-07-27 23:11:27,786 | INFO     | pilot state: finished 
[2025-07-27 19:12:01] 2025-07-27 23:11:27,786 | INFO     | transexitcode: 0
[2025-07-27 19:12:01] 2025-07-27 23:11:27,786 | INFO     | exeerrorcode: 0
[2025-07-27 19:12:01] 2025-07-27 23:11:27,786 | INFO     | exeerrordiag: 
[2025-07-27 19:12:01] 2025-07-27 23:11:27,786 | INFO     | exitcode: 0
[2025-07-27 19:12:01] 2025-07-27 23:11:27,786 | INFO     | exitmsg: OK
[2025-07-27 19:12:01] 2025-07-27 23:11:27,786 | INFO     | cpuconsumptiontime: 53600 s
[2025-07-27 19:12:01] 2025-07-27 23:11:27,786 | INFO     | nevents: 400
[2025-07-27 19:12:01] 2025-07-27 23:11:27,787 | INFO     | neventsw: 0
[2025-07-27 19:12:01] 2025-07-27 23:11:27,787 | INFO     | pid: 722332
[2025-07-27 19:12:01] 2025-07-27 23:11:27,787 | INFO     | pgrp: 722332
[2025-07-27 19:12:01] 2025-07-27 23:11:27,787 | INFO     | corecount: 10
[2025-07-27 19:12:01] 2025-07-27 23:11:27,787 | INFO     | event service: False
[2025-07-27 19:12:01] 2025-07-27 23:11:27,787 | INFO     | sizes: {0: 2397304, 1: 2397503, 5: 2397765, 12: 2397821, 5780: 2424430, 5781: 2433428, 5783: 2433612, 5789: 2433806}
[2025-07-27 19:12:01] 2025-07-27 23:11:27,787 | INFO     | --------------------------------------------------
[2025-07-27 19:12:01] 2025-07-27 23:11:27,787 | INFO     | 
[2025-07-27 19:12:01] 2025-07-27 23:11:27,788 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 19:12:01] 2025-07-27 23:11:27,813 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,813 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,814 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,814 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,814 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,814 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,814 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,815 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,815 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,815 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,815 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,815 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,815 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:12:01] 2025-07-27 23:11:27,815 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,816 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:12:01] 2025-07-27 23:11:27,816 | INFO     | job 6747525754 has completed (purged errors)
[2025-07-27 19:12:01] 2025-07-27 23:11:27,816 | INFO     | overall cleanup function is called
[2025-07-27 19:12:01] 2025-07-27 23:11:28,824 | INFO     | --- collectZombieJob: --- 10, [722332]
[2025-07-27 19:12:01] 2025-07-27 23:11:28,824 | INFO     | zombie collector waiting for pid 722332
[2025-07-27 19:12:01] 2025-07-27 23:11:28,825 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:12:01] 2025-07-27 23:11:28,825 | INFO     | collected zombie processes
[2025-07-27 19:12:01] 2025-07-27 23:11:28,825 | INFO     | will attempt to kill all subprocesses of pid=722332
[2025-07-27 19:12:01] 2025-07-27 23:11:29,050 | INFO     | process IDs to be killed: [722332] (in reverse order)
[2025-07-27 19:12:01] 2025-07-27 23:11:29,129 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:12:01] 2025-07-27 23:11:29,130 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:12:01] 2025-07-27 23:11:29,140 | INFO     | did not find any defunct processes belonging to 722332
[2025-07-27 19:12:01] 2025-07-27 23:11:29,150 | INFO     | did not find any defunct processes belonging to 722332
[2025-07-27 19:12:01] 2025-07-27 23:11:29,150 | INFO     | ready for new job
[2025-07-27 19:12:01] 2025-07-27 23:11:29,150 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:12:01] 2025-07-27 23:11:29,152 | INFO     | ***************************************
[2025-07-27 19:12:01] 2025-07-27 23:11:29,152 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:12:01] 2025-07-27 23:11:29,152 | INFO     | ***************************************
[2025-07-27 19:12:01] 2025-07-27 23:11:29,152 | INFO     | 
[2025-07-27 19:12:01] 2025-07-27 23:11:29,154 | INFO     | architecture information:
[2025-07-27 19:12:01] 2025-07-27 23:11:29,155 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:12:01] 2025-07-27 23:11:29,171 | INFO     | cat /etc/os-release:
[2025-07-27 19:12:01] NAME="CentOS Linux"
[2025-07-27 19:12:01] VERSION="7 (Core)"
[2025-07-27 19:12:01] ID="centos"
[2025-07-27 19:12:01] ID_LIKE="rhel fedora"
[2025-07-27 19:12:01] VERSION_ID="7"
[2025-07-27 19:12:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:12:01] ANSI_COLOR="0;31"
[2025-07-27 19:12:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:12:01] HOME_URL="https://www.centos.org/"
[2025-07-27 19:12:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:12:01] 
[2025-07-27 19:12:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:12:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:12:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:12:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:12:01] 
[2025-07-27 19:12:01] 2025-07-27 23:11:29,171 | INFO     | ***************************************
[2025-07-27 19:12:01] 2025-07-27 23:11:29,675 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 19:12:01] 2025-07-27 23:11:29,691 | INFO     | sufficient remaining disk space (54005858304 B)
[2025-07-27 19:12:01] 2025-07-27 23:11:29,691 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:12:01] 2025-07-27 23:11:29,692 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:12:01] 2025-07-27 23:11:29,692 | INFO     | update_server=False
[2025-07-27 19:12:01] 2025-07-27 23:11:29,692 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:12:01] 2025-07-27 23:11:29,692 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:12:01] 2025-07-27 23:11:29,692 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:12:01] 2025-07-27 23:11:29,693 | INFO     | aborting loop
[2025-07-27 19:12:01] 2025-07-27 23:11:29,966 | INFO     | all job control threads have been joined
[2025-07-27 19:12:01] 2025-07-27 23:11:30,154 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:12:01] 2025-07-27 23:11:30,583 | INFO     | all data control threads have been joined
[2025-07-27 19:12:01] 2025-07-27 23:11:30,697 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:12:01] 2025-07-27 23:11:30,698 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:12:01] 2025-07-27 23:11:30,698 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:12:01] 2025-07-27 23:11:30,851 | INFO     | all payload control threads have been joined
[2025-07-27 19:12:01] 2025-07-27 23:11:30,884 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:12:01] 2025-07-27 23:11:30,971 | INFO     | [job] control thread has finished
[2025-07-27 19:12:01] 2025-07-27 23:11:31,178 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:12:01] 2025-07-27 23:11:31,189 | INFO     | [job] validate thread has finished
[2025-07-27 19:12:01] 2025-07-27 23:11:31,211 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:12:01] 2025-07-27 23:11:31,242 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:12:01] 2025-07-27 23:11:31,543 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:12:01] 2025-07-27 23:11:31,589 | INFO     | [data] control thread has finished
[2025-07-27 19:12:01] 2025-07-27 23:11:31,589 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:12:01] 2025-07-27 23:11:31,589 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:12:01] 2025-07-27 23:11:31,857 | INFO     | [payload] control thread has finished
[2025-07-27 19:12:01] 2025-07-27 23:11:32,160 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:12:01] 2025-07-27 23:11:35,549 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:12:01] 2025-07-27 23:11:40,220 | INFO     | job.realtimelogging is not enabled
[2025-07-27 19:12:01] 2025-07-27 23:11:41,225 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:12:01] 2025-07-27 23:11:41,594 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140605181634368)>', '<ExcThread(monitor, started 140604470191872)>']
[2025-07-27 19:12:01] 2025-07-27 23:11:46,619 | INFO     | all workflow threads have been joined
[2025-07-27 19:12:01] 2025-07-27 23:11:46,620 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:12:01] 2025-07-27 23:11:46,620 | INFO     | traces error code: 0
[2025-07-27 19:12:01] 2025-07-27 23:11:46,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:12:01] 2025-07-27 23:12:00,681 | INFO     | PID=715526 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 19:12:01] 2025-07-27 23:12:00,682 | INFO     | .. there are 6 such processes running
[2025-07-27 19:12:01] 2025-07-27 23:12:00,682 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:12:01] 2025-07-27 23:12:00,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:12:01] 2025-07-27 23:12:00,683 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:12:01] 2025-07-27 23:12:00,683 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:12:01] 2025-07-27 23:12:00,683 | INFO     | [monitor] control thread has ended
[2025-07-27 19:12:01] 2025-07-27 23:12:00,838 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:12:01] 2025-07-27 23:12:00,843 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:12:01] 2025-07-27 23:12:00,847 [wrapper] pilotpid: 715526
[2025-07-27 19:12:01] 2025-07-27 23:12:00,850 [wrapper] Pilot exit status: 0
[2025-07-27 19:12:01] 2025-07-27 23:12:00,868 [wrapper] pandaids: 6747525754
[2025-07-27 19:12:01] 2025-07-27 23:12:00,920 [wrapper] cleanup supervisor_pilot  803708 715527
[2025-07-27 19:12:01] 2025-07-27 23:12:00,924 [wrapper] Test setup, not cleaning
[2025-07-27 19:12:01] 2025-07-27 23:12:00,929 [wrapper] apfmon messages muted
[2025-07-27 19:12:01] 2025-07-27 23:12:00,933 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:12:01] 2025-07-27 23:12:00,938 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:12:01]  *** Error codes and diagnostics ***
[2025-07-27 19:12:01]     "exeErrorCode": 0,
[2025-07-27 19:12:01]     "exeErrorDiag": "",
[2025-07-27 19:12:01]     "pilotErrorCode": 0,
[2025-07-27 19:12:01]     "pilotErrorDiag": "",
[2025-07-27 19:12:01]  *** Listing of results directory ***
[2025-07-27 19:12:01] total 344204
[2025-07-27 19:12:01] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:02 pilot3.tar.gz
[2025-07-27 19:12:01] -rwx------. 1 boincer umatlas     36292 Jul 27 12:20 runpilot2-wrapper.sh
[2025-07-27 19:12:01] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 12:20 queuedata.json
[2025-07-27 19:12:01] -rw-r--r--. 1 boincer umatlas       100 Jul 27 17:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:12:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 17:34 run_atlas
[2025-07-27 19:12:01] -rw-r--r--. 1 boincer umatlas       105 Jul 27 17:34 job.xml
[2025-07-27 19:12:01] -rw-r--r--. 2 boincer umatlas 145010082 Jul 27 17:34 EVNT.45743347._002880.pool.root.1
[2025-07-27 19:12:01] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:34 start_atlas.sh
[2025-07-27 19:12:01] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 17:34 shared
[2025-07-27 19:12:01] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 17:34 input.tar.gz
[2025-07-27 19:12:01] -rw-r--r--. 1 boincer umatlas         0 Jul 27 17:34 boinc_lockfile
[2025-07-27 19:12:01] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 17:34 pandaJob.out
[2025-07-27 19:12:01] -rw-------. 1 boincer umatlas    980117 Jul 27 17:34 agis_schedconf.cvmfs.json
[2025-07-27 19:12:01] -rw-------. 1 boincer umatlas   1593052 Jul 27 17:34 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:12:01] drwx------. 4 boincer umatlas      4096 Jul 27 17:34 pilot3
[2025-07-27 19:12:01] -rw-r--r--. 1 boincer umatlas      6657 Jul 27 19:10 init_data.xml
[2025-07-27 19:12:01] -rw-------. 1 boincer umatlas 201754232 Jul 27 19:10 HITS.45743349._052301.pool.root.1
[2025-07-27 19:12:01] -rw-r--r--. 1 boincer umatlas       530 Jul 27 19:10 boinc_task_state.xml
[2025-07-27 19:12:01] -rw-------. 1 boincer umatlas      1030 Jul 27 19:11 memory_monitor_summary.json
[2025-07-27 19:12:01] -rw-------. 1 boincer umatlas    348527 Jul 27 19:11 log.45743349._052301.job.log.tgz.1
[2025-07-27 19:12:01] -rw-------. 1 boincer umatlas      7810 Jul 27 19:11 heartbeat.json
[2025-07-27 19:12:01] -rw-------. 1 boincer umatlas        95 Jul 27 19:11 pilot_heartbeat.json
[2025-07-27 19:12:01] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:11 boinc_mmap_file
[2025-07-27 19:12:01] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:11 wrapper_checkpoint.txt
[2025-07-27 19:12:01] -rw-------. 1 boincer umatlas       821 Jul 27 19:12 pilotlog.txt
[2025-07-27 19:12:01] -rw-------. 1 boincer umatlas    564053 Jul 27 19:12 log.45743349._052301.job.log.1
[2025-07-27 19:12:01] -rw-------. 1 boincer umatlas       357 Jul 27 19:12 output.list
[2025-07-27 19:12:01] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:12 runtime_log
[2025-07-27 19:12:01] -rw-------. 1 boincer umatlas    931840 Jul 27 19:12 result.tar.gz
[2025-07-27 19:12:01] -rw-------. 1 boincer umatlas       652 Jul 27 19:12 WCoKDmmHJ07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXpVLDmcDWpmn.diag
[2025-07-27 19:12:01] -rw-r--r--. 1 boincer umatlas      8657 Jul 27 19:12 runtime_log.err
[2025-07-27 19:12:01] -rw-r--r--. 1 boincer umatlas     21474 Jul 27 19:12 stderr.txt
[2025-07-27 19:12:01] HITS file was successfully produced:
[2025-07-27 19:12:01] -rw-------. 1 boincer umatlas 201754232 Jul 27 19:10 shared/HITS.pool.root.1
[2025-07-27 19:12:01]  *** Contents of shared directory: ***
[2025-07-27 19:12:01] total 340104
[2025-07-27 19:12:01] -rw-r--r--. 2 boincer umatlas 145010082 Jul 27 17:34 ATLAS.root_0
[2025-07-27 19:12:01] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:34 start_atlas.sh
[2025-07-27 19:12:01] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 17:34 input.tar.gz
[2025-07-27 19:12:01] -rw-------. 1 boincer umatlas 201754232 Jul 27 19:10 HITS.pool.root.1
[2025-07-27 19:12:01] -rw-------. 1 boincer umatlas    931840 Jul 27 19:12 result.tar.gz
19:12:02 (711927): run_atlas exited; CPU time 53690.853942
19:12:02 (711927): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN