Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:38:14 (1996726): wrapper (7.7.26015): starting
17:38:14 (1996726): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 17:38:14] Arguments: --nthreads 8
[2025-07-27 17:38:14] Threads: 8
[2025-07-27 17:38:14] Checking for CVMFS
[2025-07-27 17:38:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:38:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:38:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:38:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:38:15] 2.13.1.0 682970 14695 206316 148825 1 315 32871356 40960001 20347 16776704 0 43971957 99.722 62583095 40184 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 17:38:15] CVMFS is ok
[2025-07-27 17:38:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:38:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:38:15] Further information can be found at the LHC@home message board.
[2025-07-27 17:38:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:38:15] Checking for apptainer binary...
[2025-07-27 17:38:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:38:15] Running /usr/bin/apptainer --version
[2025-07-27 17:38:15] apptainer version 1.4.1-1.el9
[2025-07-27 17:38:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:38:15] c-212-13.aglt2.org
[2025-07-27 17:38:15] apptainer works
[2025-07-27 17:38:15] Set ATHENA_PROC_NUMBER=8
[2025-07-27 17:38:15] Set ATHENA_CORE_NUMBER=8
[2025-07-27 17:38:15] Starting ATLAS job with PandaID=6747525970
[2025-07-27 17:38:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:49:10]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:49:10] 2025-07-27 23:48:35,813 | INFO     | chi2: 1.9628236229936586
[2025-07-27 19:49:10] 2025-07-27 23:48:35,813 | INFO     | sum of square deviations: 576988021.9674811
[2025-07-27 19:49:10] 2025-07-27 23:48:35,814 | INFO     | sum of deviations: 4127275544.3414645
[2025-07-27 19:49:10] 2025-07-27 23:48:35,814 | INFO     | mean x: 1753656066.0162601
[2025-07-27 19:49:10] 2025-07-27 23:48:35,814 | INFO     | mean y: 2533998.8292682925
[2025-07-27 19:49:10] 2025-07-27 23:48:35,814 | INFO     | -- intersect: -12541611666.057503
[2025-07-27 19:49:10] 2025-07-27 23:48:35,814 | INFO     | intersect: -12541611666.057503
[2025-07-27 19:49:10] 2025-07-27 23:48:35,814 | INFO     | chi2: 1.189061322059289
[2025-07-27 19:49:10] 2025-07-27 23:48:35,814 | INFO     | current chi2=1.189061322059289 (change=39.420877753358354 %)
[2025-07-27 19:49:10] 2025-07-27 23:48:35,815 | INFO     | sum of square deviations: 509443179.46610177
[2025-07-27 19:49:10] 2025-07-27 23:48:35,815 | INFO     | sum of deviations: 4142871740.415255
[2025-07-27 19:49:10] 2025-07-27 23:48:35,815 | INFO     | mean x: 1753655913.5169492
[2025-07-27 19:49:10] 2025-07-27 23:48:35,815 | INFO     | mean y: 2534034.0423728814
[2025-07-27 19:49:10] 2025-07-27 23:48:35,815 | INFO     | -- intersect: -14258470567.364584
[2025-07-27 19:49:10] 2025-07-27 23:48:35,815 | INFO     | intersect: -14258470567.364584
[2025-07-27 19:49:10] 2025-07-27 23:48:35,816 | INFO     | chi2: 1.1905244190628874
[2025-07-27 19:49:10] 2025-07-27 23:48:35,816 | INFO     | current chi2=1.1905244190628874 (change=-0.12304638763832622 %)
[2025-07-27 19:49:10] 2025-07-27 23:48:35,816 | INFO     | right removable region: 117
[2025-07-27 19:49:10] 2025-07-27 23:48:35,816 | INFO     | sum of square deviations: 576986801.9674811
[2025-07-27 19:49:10] 2025-07-27 23:48:35,816 | INFO     | sum of deviations: -18755066817.528454
[2025-07-27 19:49:10] 2025-07-27 23:48:35,816 | INFO     | mean x: 1753656371.0162601
[2025-07-27 19:49:10] 2025-07-27 23:48:35,817 | INFO     | mean y: 2545606.764227642
[2025-07-27 19:49:10] 2025-07-27 23:48:35,817 | INFO     | -- intersect: 57005482764.49856
[2025-07-27 19:49:10] 2025-07-27 23:48:35,817 | INFO     | intersect: 57005482764.49856
[2025-07-27 19:49:10] 2025-07-27 23:48:35,817 | INFO     | chi2: 0.8499498650449041
[2025-07-27 19:49:10] 2025-07-27 23:48:35,817 | INFO     | current chi2=0.8499498650449041 (change=56.69759345220341 %)
[2025-07-27 19:49:10] 2025-07-27 23:48:35,817 | INFO     | sum of square deviations: 509440739.46610177
[2025-07-27 19:49:10] 2025-07-27 23:48:35,818 | INFO     | sum of deviations: -16429400371.177963
[2025-07-27 19:49:10] 2025-07-27 23:48:35,818 | INFO     | mean x: 1753656523.5169492
[2025-07-27 19:49:10] 2025-07-27 23:48:35,818 | INFO     | mean y: 2540331.838983051
[2025-07-27 19:49:10] 2025-07-27 23:48:35,818 | INFO     | -- intersect: 56557744708.667465
[2025-07-27 19:49:10] 2025-07-27 23:48:35,818 | INFO     | intersect: 56557744708.667465
[2025-07-27 19:49:10] 2025-07-27 23:48:35,818 | INFO     | chi2: 0.8491092262743795
[2025-07-27 19:49:10] 2025-07-27 23:48:35,818 | INFO     | current chi2=0.8491092262743795 (change=0.09890451250089162 %)
[2025-07-27 19:49:10] 2025-07-27 23:48:35,818 | INFO     | left removable region: 20
[2025-07-27 19:49:10] 2025-07-27 23:48:35,818 | INFO     | sum of square deviations: 282975219.9587634
[2025-07-27 19:49:10] 2025-07-27 23:48:35,819 | INFO     | sum of deviations: -2483619869.5567
[2025-07-27 19:49:10] 2025-07-27 23:48:35,819 | INFO     | mean x: 1753656493.0206184
[2025-07-27 19:49:10] 2025-07-27 23:48:35,819 | INFO     | mean y: 2546066.2783505153
[2025-07-27 19:49:10] 2025-07-27 23:48:35,819 | INFO     | -- intersect: 15394056711.902452
[2025-07-27 19:49:10] 2025-07-27 23:48:35,819 | INFO     | intersect: 15394056711.902452
[2025-07-27 19:49:10] 2025-07-27 23:48:35,819 | INFO     | chi2: 0.02502184352339944
[2025-07-27 19:49:10] 2025-07-27 23:48:35,819 | INFO     | -- intersect: 15394056711.902452
[2025-07-27 19:49:10] 2025-07-27 23:48:35,820 | INFO     | current memory leak: -8.78 B/s (using 97 data points, chi2=0.03)
[2025-07-27 19:49:10] 2025-07-27 23:48:35,820 | INFO     | could have reported an average CPU frequency of 2915 MHz (8 samples)
[2025-07-27 19:49:10] 2025-07-27 23:48:35,820 | INFO     | ..............................
[2025-07-27 19:49:10] 2025-07-27 23:48:35,820 | INFO     | . Timing measurements:
[2025-07-27 19:49:10] 2025-07-27 23:48:35,821 | INFO     | . get job = 0 s
[2025-07-27 19:49:10] 2025-07-27 23:48:35,821 | INFO     | . initial setup = 2 s
[2025-07-27 19:49:10] 2025-07-27 23:48:35,821 | INFO     | . payload setup = 9 s
[2025-07-27 19:49:10] 2025-07-27 23:48:35,821 | INFO     | . stage-in = 0 s
[2025-07-27 19:49:10] 2025-07-27 23:48:35,821 | INFO     | . payload execution = 7760 s
[2025-07-27 19:49:10] 2025-07-27 23:48:35,821 | INFO     | . stage-out = 0 s
[2025-07-27 19:49:10] 2025-07-27 23:48:35,821 | INFO     | . log creation = 0 s
[2025-07-27 19:49:10] 2025-07-27 23:48:35,821 | INFO     | ..............................
[2025-07-27 19:49:10] 2025-07-27 23:48:35,843 | INFO     | sufficient remaining disk space (128511377408 B)
[2025-07-27 19:49:10] 2025-07-27 23:48:35,844 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-27 19:49:10] 2025-07-27 23:48:35,881 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6747525970: 3376763 B (within 2537553920 B limit)
[2025-07-27 19:49:10] 2025-07-27 23:48:35,881 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6747525970/HITS.45743349._052339.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-27 19:49:10] 2025-07-27 23:48:35,881 | INFO     | total size of present files: 0 B (workdir size: 3376763 B)
[2025-07-27 19:49:10] 2025-07-27 23:48:35,882 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6747525970/HITS.45743349._052339.pool.root.1 since it does not exist
[2025-07-27 19:49:10] 2025-07-27 23:48:36,385 | INFO     | number of running child processes to parent process 2007426: 1
[2025-07-27 19:49:10] 2025-07-27 23:48:36,385 | INFO     | maximum number of monitored processes: 6
[2025-07-27 19:49:10] 2025-07-27 23:48:36,385 | INFO     | aborting job monitoring since job object (job id=6747525970) has expired
[2025-07-27 19:49:10] 2025-07-27 23:48:36,416 | INFO     | 
[2025-07-27 19:49:10] 2025-07-27 23:48:36,416 | INFO     | job summary report
[2025-07-27 19:49:10] 2025-07-27 23:48:36,416 | INFO     | --------------------------------------------------
[2025-07-27 19:49:10] 2025-07-27 23:48:36,416 | INFO     | PanDA job id: 6747525970
[2025-07-27 19:49:10] 2025-07-27 23:48:36,416 | INFO     | task id: 45743349
[2025-07-27 19:49:10] 2025-07-27 23:48:36,416 | INFO     | errors: (none)
[2025-07-27 19:49:10] 2025-07-27 23:48:36,416 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:49:10] 2025-07-27 23:48:36,418 | INFO     | pilot state: finished 
[2025-07-27 19:49:10] 2025-07-27 23:48:36,418 | INFO     | transexitcode: 0
[2025-07-27 19:49:10] 2025-07-27 23:48:36,418 | INFO     | exeerrorcode: 0
[2025-07-27 19:49:10] 2025-07-27 23:48:36,418 | INFO     | exeerrordiag: 
[2025-07-27 19:49:10] 2025-07-27 23:48:36,418 | INFO     | exitcode: 0
[2025-07-27 19:49:10] 2025-07-27 23:48:36,418 | INFO     | exitmsg: OK
[2025-07-27 19:49:10] 2025-07-27 23:48:36,418 | INFO     | cpuconsumptiontime: 40761 s
[2025-07-27 19:49:10] 2025-07-27 23:48:36,418 | INFO     | nevents: 400
[2025-07-27 19:49:10] 2025-07-27 23:48:36,418 | INFO     | neventsw: 0
[2025-07-27 19:49:10] 2025-07-27 23:48:36,418 | INFO     | pid: 2007426
[2025-07-27 19:49:10] 2025-07-27 23:48:36,418 | INFO     | pgrp: 2007426
[2025-07-27 19:49:10] 2025-07-27 23:48:36,418 | INFO     | corecount: 8
[2025-07-27 19:49:10] 2025-07-27 23:48:36,419 | INFO     | event service: False
[2025-07-27 19:49:10] 2025-07-27 23:48:36,419 | INFO     | sizes: {0: 2397248, 1: 2397503, 7: 2397765, 12: 2397793, 7774: 2425398, 7777: 2434396, 7778: 2434580, 7788: 2434802}
[2025-07-27 19:49:10] 2025-07-27 23:48:36,419 | INFO     | --------------------------------------------------
[2025-07-27 19:49:10] 2025-07-27 23:48:36,419 | INFO     | 
[2025-07-27 19:49:10] 2025-07-27 23:48:36,419 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 19:49:10] 2025-07-27 23:48:36,448 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,448 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,448 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,448 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,448 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,448 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,449 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,449 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,449 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,449 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,449 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,449 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,449 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,449 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,449 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,449 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,449 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,449 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:49:10] 2025-07-27 23:48:36,450 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,450 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:49:10] 2025-07-27 23:48:36,450 | INFO     | job 6747525970 has completed (purged errors)
[2025-07-27 19:49:10] 2025-07-27 23:48:36,450 | INFO     | overall cleanup function is called
[2025-07-27 19:49:10] 2025-07-27 23:48:37,459 | INFO     | --- collectZombieJob: --- 10, [2007426]
[2025-07-27 19:49:10] 2025-07-27 23:48:37,459 | INFO     | zombie collector waiting for pid 2007426
[2025-07-27 19:49:10] 2025-07-27 23:48:37,459 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:49:10] 2025-07-27 23:48:37,459 | INFO     | collected zombie processes
[2025-07-27 19:49:10] 2025-07-27 23:48:37,459 | INFO     | will attempt to kill all subprocesses of pid=2007426
[2025-07-27 19:49:10] 2025-07-27 23:48:37,885 | INFO     | process IDs to be killed: [2007426] (in reverse order)
[2025-07-27 19:49:10] 2025-07-27 23:48:38,025 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:49:10] 2025-07-27 23:48:38,025 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:49:10] 2025-07-27 23:48:38,048 | INFO     | did not find any defunct processes belonging to 2007426
[2025-07-27 19:49:10] 2025-07-27 23:48:38,069 | INFO     | did not find any defunct processes belonging to 2007426
[2025-07-27 19:49:10] 2025-07-27 23:48:38,069 | INFO     | ready for new job
[2025-07-27 19:49:10] 2025-07-27 23:48:38,069 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:49:10] 2025-07-27 23:48:38,071 | INFO     | ***************************************
[2025-07-27 19:49:10] 2025-07-27 23:48:38,071 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:49:10] 2025-07-27 23:48:38,072 | INFO     | ***************************************
[2025-07-27 19:49:10] 2025-07-27 23:48:38,072 | INFO     | 
[2025-07-27 19:49:10] 2025-07-27 23:48:38,078 | INFO     | architecture information:
[2025-07-27 19:49:10] 2025-07-27 23:48:38,078 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:49:10] 2025-07-27 23:48:38,107 | INFO     | cat /etc/os-release:
[2025-07-27 19:49:10] NAME="CentOS Linux"
[2025-07-27 19:49:10] VERSION="7 (Core)"
[2025-07-27 19:49:10] ID="centos"
[2025-07-27 19:49:10] ID_LIKE="rhel fedora"
[2025-07-27 19:49:10] VERSION_ID="7"
[2025-07-27 19:49:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:49:10] ANSI_COLOR="0;31"
[2025-07-27 19:49:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:49:10] HOME_URL="https://www.centos.org/"
[2025-07-27 19:49:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:49:10] 
[2025-07-27 19:49:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:49:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:49:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:49:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:49:10] 
[2025-07-27 19:49:10] 2025-07-27 23:48:38,107 | INFO     | ***************************************
[2025-07-27 19:49:10] 2025-07-27 23:48:38,611 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 19:49:10] 2025-07-27 23:48:38,635 | INFO     | sufficient remaining disk space (128515571712 B)
[2025-07-27 19:49:10] 2025-07-27 23:48:38,635 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:49:10] 2025-07-27 23:48:38,635 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:49:10] 2025-07-27 23:48:38,635 | INFO     | update_server=False
[2025-07-27 19:49:10] 2025-07-27 23:48:38,635 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:49:10] 2025-07-27 23:48:38,636 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:49:10] 2025-07-27 23:48:38,889 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 19:49:10] 2025-07-27 23:48:38,889 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 19:49:10] 2025-07-27 23:48:38,889 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:49:10] 2025-07-27 23:48:38,889 | INFO     | will abort loop
[2025-07-27 19:49:10] 2025-07-27 23:48:39,439 | INFO     | all payload control threads have been joined
[2025-07-27 19:49:10] 2025-07-27 23:48:39,553 | INFO     | all data control threads have been joined
[2025-07-27 19:49:10] 2025-07-27 23:48:39,642 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:49:10] 2025-07-27 23:48:39,701 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:49:10] 2025-07-27 23:48:39,896 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:49:10] 2025-07-27 23:48:39,999 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:49:10] 2025-07-27 23:48:40,038 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:49:10] 2025-07-27 23:48:40,049 | INFO     | all job control threads have been joined
[2025-07-27 19:49:10] 2025-07-27 23:48:40,118 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:49:10] 2025-07-27 23:48:40,409 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:49:10] 2025-07-27 23:48:40,448 | INFO     | [payload] control thread has finished
[2025-07-27 19:49:10] 2025-07-27 23:48:40,558 | INFO     | [data] control thread has finished
[2025-07-27 19:49:10] 2025-07-27 23:48:40,633 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:49:10] 2025-07-27 23:48:40,643 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:49:10] 2025-07-27 23:48:40,810 | INFO     | [job] validate thread has finished
[2025-07-27 19:49:10] 2025-07-27 23:48:40,949 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:49:10] 2025-07-27 23:48:40,950 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:49:10] 2025-07-27 23:48:41,054 | INFO     | [job] control thread has finished
[2025-07-27 19:49:10] 2025-07-27 23:48:41,135 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:49:10] 2025-07-27 23:48:41,956 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:49:10] 2025-07-27 23:48:44,643 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:49:10] 2025-07-27 23:48:45,888 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140034393753408)>', '<ExcThread(monitor, started 140033877059328)>']
[2025-07-27 19:49:10] 2025-07-27 23:48:50,914 | INFO     | all workflow threads have been joined
[2025-07-27 19:49:10] 2025-07-27 23:48:50,914 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:49:10] 2025-07-27 23:48:50,914 | INFO     | traces error code: 0
[2025-07-27 19:49:10] 2025-07-27 23:48:50,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:49:10] 2025-07-27 23:49:09,420 | INFO     | PID=2000302 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:49:10] 2025-07-27 23:49:09,420 | INFO     | .. there are 17 such processes running
[2025-07-27 19:49:10] 2025-07-27 23:49:09,421 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:49:10] 2025-07-27 23:49:09,421 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:49:10] 2025-07-27 23:49:09,421 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:49:10] 2025-07-27 23:49:09,421 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:49:10] 2025-07-27 23:49:09,421 | INFO     | [monitor] control thread has ended
[2025-07-27 19:49:10] 2025-07-27 23:49:09,589 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:49:10] 2025-07-27 23:49:09,620 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:49:10] 2025-07-27 23:49:09,630 [wrapper] pilotpid: 2000302
[2025-07-27 19:49:10] 2025-07-27 23:49:09,638 [wrapper] Pilot exit status: 0
[2025-07-27 19:49:10] 2025-07-27 23:49:09,751 [wrapper] pandaids: 6747525970
[2025-07-27 19:49:10] 2025-07-27 23:49:10,015 [wrapper] cleanup supervisor_pilot 2295348 2000303
[2025-07-27 19:49:10] 2025-07-27 23:49:10,019 [wrapper] Test setup, not cleaning
[2025-07-27 19:49:10] 2025-07-27 23:49:10,048 [wrapper] apfmon messages muted
[2025-07-27 19:49:10] 2025-07-27 23:49:10,056 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:49:10] 2025-07-27 23:49:10,063 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:49:10]  *** Error codes and diagnostics ***
[2025-07-27 19:49:10]     "exeErrorCode": 0,
[2025-07-27 19:49:10]     "exeErrorDiag": "",
[2025-07-27 19:49:10]     "pilotErrorCode": 0,
[2025-07-27 19:49:10]     "pilotErrorDiag": "",
[2025-07-27 19:49:10]  *** Listing of results directory ***
[2025-07-27 19:49:10] total 352260
[2025-07-27 19:49:10] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:02 pilot3.tar.gz
[2025-07-27 19:49:10] -rwx------. 1 boincer umatlas     36292 Jul 27 12:41 runpilot2-wrapper.sh
[2025-07-27 19:49:10] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 12:41 queuedata.json
[2025-07-27 19:49:10] -rw-r--r--. 1 boincer umatlas       100 Jul 27 17:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:49:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 17:38 run_atlas
[2025-07-27 19:49:10] -rw-r--r--. 1 boincer umatlas       105 Jul 27 17:38 job.xml
[2025-07-27 19:49:10] -rw-r--r--. 2 boincer umatlas 147548819 Jul 27 17:38 EVNT.45743347._002883.pool.root.1
[2025-07-27 19:49:10] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 17:38 shared
[2025-07-27 19:49:10] -rw-r--r--. 2 boincer umatlas    542887 Jul 27 17:38 input.tar.gz
[2025-07-27 19:49:10] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:38 start_atlas.sh
[2025-07-27 19:49:10] -rw-r--r--. 1 boincer umatlas         0 Jul 27 17:38 boinc_lockfile
[2025-07-27 19:49:10] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 17:38 pandaJob.out
[2025-07-27 19:49:10] -rw-------. 1 boincer umatlas    980117 Jul 27 17:38 agis_schedconf.cvmfs.json
[2025-07-27 19:49:10] -rw-------. 1 boincer umatlas   1593052 Jul 27 17:38 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:49:10] drwx------. 4 boincer umatlas      4096 Jul 27 17:38 pilot3
[2025-07-27 19:49:10] -rw-r--r--. 1 boincer umatlas      6943 Jul 27 19:46 init_data.xml
[2025-07-27 19:49:10] -rw-------. 1 boincer umatlas 207224575 Jul 27 19:47 HITS.45743349._052339.pool.root.1
[2025-07-27 19:49:10] -rw-r--r--. 1 boincer umatlas       529 Jul 27 19:47 boinc_task_state.xml
[2025-07-27 19:49:10] -rw-------. 1 boincer umatlas      1037 Jul 27 19:48 memory_monitor_summary.json
[2025-07-27 19:49:10] -rw-------. 1 boincer umatlas    326607 Jul 27 19:48 log.45743349._052339.job.log.tgz.1
[2025-07-27 19:49:10] -rw-------. 1 boincer umatlas      7792 Jul 27 19:48 heartbeat.json
[2025-07-27 19:49:10] -rw-------. 1 boincer umatlas       823 Jul 27 19:49 pilotlog.txt
[2025-07-27 19:49:10] -rw-------. 1 boincer umatlas        95 Jul 27 19:49 pilot_heartbeat.json
[2025-07-27 19:49:10] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:49 boinc_mmap_file
[2025-07-27 19:49:10] -rw-------. 1 boincer umatlas    705631 Jul 27 19:49 log.45743349._052339.job.log.1
[2025-07-27 19:49:10] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:49 wrapper_checkpoint.txt
[2025-07-27 19:49:10] -rw-------. 1 boincer umatlas       357 Jul 27 19:49 output.list
[2025-07-27 19:49:10] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:49 runtime_log
[2025-07-27 19:49:10] -rw-------. 1 boincer umatlas   1054720 Jul 27 19:49 result.tar.gz
[2025-07-27 19:49:10] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 19:49 runtime_log.err
[2025-07-27 19:49:10] -rw-------. 1 boincer umatlas       655 Jul 27 19:49 qNJNDmdcJ07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcqVLDmBXjDOn.diag
[2025-07-27 19:49:10] -rw-r--r--. 1 boincer umatlas     21487 Jul 27 19:49 stderr.txt
[2025-07-27 19:49:10] HITS file was successfully produced:
[2025-07-27 19:49:10] -rw-------. 1 boincer umatlas 207224575 Jul 27 19:47 shared/HITS.pool.root.1
[2025-07-27 19:49:10]  *** Contents of shared directory: ***
[2025-07-27 19:49:10] total 348044
[2025-07-27 19:49:10] -rw-r--r--. 2 boincer umatlas 147548819 Jul 27 17:38 ATLAS.root_0
[2025-07-27 19:49:10] -rw-r--r--. 2 boincer umatlas    542887 Jul 27 17:38 input.tar.gz
[2025-07-27 19:49:10] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:38 start_atlas.sh
[2025-07-27 19:49:10] -rw-------. 1 boincer umatlas 207224575 Jul 27 19:47 HITS.pool.root.1
[2025-07-27 19:49:10] -rw-------. 1 boincer umatlas   1054720 Jul 27 19:49 result.tar.gz
19:49:12 (1996726): run_atlas exited; CPU time 41021.963304
19:49:12 (1996726): called boinc_finish(0)

</stderr_txt>
]]>

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