Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:32:33 (3336574): wrapper (7.7.26015): starting
17:32:33 (3336574): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 17:32:33] Arguments: --nthreads 8
[2025-07-27 17:32:33] Threads: 8
[2025-07-27 17:32:33] Checking for CVMFS
[2025-07-27 17:32:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:32:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:32:33] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:32:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:32:33] 2.12.6.0 1094862 18925 414572 148825 2 427 21630308 32935936 13322 16776704 1 119000226 99.603 120484449 20196 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 17:32:33] CVMFS is ok
[2025-07-27 17:32:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:32:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:32:33] Further information can be found at the LHC@home message board.
[2025-07-27 17:32:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:32:33] Checking for apptainer binary...
[2025-07-27 17:32:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:32:33] Running /usr/bin/apptainer --version
[2025-07-27 17:32:33] apptainer version 1.4.1-1.el9
[2025-07-27 17:32:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:32:34] lc-12-33.aglt2.org
[2025-07-27 17:32:34] apptainer works
[2025-07-27 17:32:34] Set ATHENA_PROC_NUMBER=8
[2025-07-27 17:32:34] Set ATHENA_CORE_NUMBER=8
[2025-07-27 17:32:34] Starting ATLAS job with PandaID=6747411949
[2025-07-27 17:32:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:11:49]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:11:49]  lfn=log.45743349._049082.job.log.tgz.1
[2025-07-27 19:11:49]  mtime=0
[2025-07-27 19:11:49]  protocol_id=None
[2025-07-27 19:11:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 19:11:49]  replicas=None
[2025-07-27 19:11:49]  scope=mc23_13p6TeV
[2025-07-27 19:11:49]  status=None
[2025-07-27 19:11:49]  status_code=0
[2025-07-27 19:11:49]  storage_token=
[2025-07-27 19:11:49]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6747411949/log.45743349._049082.job.log.tgz.1
[2025-07-27 19:11:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/0c/log.45743349._049082.job.log.tgz.1
[2025-07-27 19:11:49]  workdir=None
[2025-07-27 19:11:49] ]
[2025-07-27 19:11:49] 2025-07-27 23:11:09,473 | INFO     | transferring file log.45743349._049082.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6747411949/log.45743349._049082.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 19:11:49] 2025-07-27 23:11:09,473 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6747411949/log.45743349._049082.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._049082.job
[2025-07-27 19:11:49] 2025-07-27 23:11:09,490 | INFO     | adding to output.list: log.45743349._049082.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/0c/log.45743349._049082.job.log.tg
[2025-07-27 19:11:49] 2025-07-27 23:11:09,490 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 19:11:49] 2025-07-27 23:11:09,490 | INFO     | summary of transferred files:
[2025-07-27 19:11:49] 2025-07-27 23:11:09,491 | INFO     |  -- lfn=log.45743349._049082.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:11:49] 2025-07-27 23:11:09,491 | INFO     | stage-out finished correctly
[2025-07-27 19:11:49] 2025-07-27 23:11:10,482 | INFO     | monitor loop #430: job 0:6747411949 is in state 'finished'
[2025-07-27 19:11:49] 2025-07-27 23:11:10,483 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:11:49] 2025-07-27 23:11:12,482 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:11:49] 2025-07-27 23:11:12,975 | INFO     | job 6747411949 has state=finished
[2025-07-27 19:11:49] 2025-07-27 23:11:12,975 | INFO     | preparing for final server update for job 6747411949 in state='finished'
[2025-07-27 19:11:49] 2025-07-27 23:11:12,975 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:11:49] 2025-07-27 23:11:12,975 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:11:49] 2025-07-27 23:11:12,976 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:11:49] 2025-07-27 23:11:12,976 | INFO     | job 6747411949 has finished - writing final server update
[2025-07-27 19:11:49] 2025-07-27 23:11:12,976 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:11:49] 2025-07-27 23:11:12,977 | INFO     | executing command: lscpu
[2025-07-27 19:11:49] 2025-07-27 23:11:12,990 | INFO     | monitor loop #431: job 0:6747411949 is in state 'finished'
[2025-07-27 19:11:49] 2025-07-27 23:11:12,990 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:11:49] 2025-07-27 23:11:13,031 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:11:49] 2025-07-27 23:11:15,493 | INFO     | monitor loop #432: job 0:6747411949 is in state 'finished'
[2025-07-27 19:11:49] 2025-07-27 23:11:15,493 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:11:49] 2025-07-27 23:11:17,052 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 19:11:49] 2025-07-27 23:11:17,056 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2606.711177083332
[2025-07-27 19:11:49] 2025-07-27 23:11:17,069 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747411949/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:11:49] 2025-07-27 23:11:17,070 | INFO     | extracted standard info from prmon json
[2025-07-27 19:11:49] 2025-07-27 23:11:17,070 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:11:49] 2025-07-27 23:11:17,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:11:49] 2025-07-27 23:11:17,071 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:11:49] 2025-07-27 23:11:17,071 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:11:49] 2025-07-27 23:11:17,073 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:11:49] 2025-07-27 23:11:17,073 | INFO     | sum of square deviations: 226022842.5
[2025-07-27 19:11:49] 2025-07-27 23:11:17,074 | INFO     | sum of deviations: -6565956064.0
[2025-07-27 19:11:49] 2025-07-27 23:11:17,074 | INFO     | mean x: 1753655015.5
[2025-07-27 19:11:49] 2025-07-27 23:11:17,074 | INFO     | mean y: 2210623.711111111
[2025-07-27 19:11:49] 2025-07-27 23:11:17,074 | INFO     | -- intersect: 50945830550.91488
[2025-07-27 19:11:49] 2025-07-27 23:11:17,074 | INFO     | intersect: 50945830550.91488
[2025-07-27 19:11:49] 2025-07-27 23:11:17,074 | INFO     | chi2: 0.12961478916371488
[2025-07-27 19:11:49] 2025-07-27 23:11:17,074 | INFO     | -- intersect: 50945830550.91488
[2025-07-27 19:11:49] 2025-07-27 23:11:17,074 | INFO     | current memory leak: -29.05 B/s (using 90 data points, chi2=0.13)
[2025-07-27 19:11:49] 2025-07-27 23:11:17,075 | INFO     | could have reported an average CPU frequency of 2576 MHz (7 samples)
[2025-07-27 19:11:49] 2025-07-27 23:11:17,075 | INFO     | ..............................
[2025-07-27 19:11:49] 2025-07-27 23:11:17,075 | INFO     | . Timing measurements:
[2025-07-27 19:11:49] 2025-07-27 23:11:17,075 | INFO     | . get job = 0 s
[2025-07-27 19:11:49] 2025-07-27 23:11:17,075 | INFO     | . initial setup = 2 s
[2025-07-27 19:11:49] 2025-07-27 23:11:17,075 | INFO     | . payload setup = 8 s
[2025-07-27 19:11:49] 2025-07-27 23:11:17,075 | INFO     | . stage-in = 0 s
[2025-07-27 19:11:49] 2025-07-27 23:11:17,075 | INFO     | . payload execution = 5874 s
[2025-07-27 19:11:49] 2025-07-27 23:11:17,075 | INFO     | . stage-out = 0 s
[2025-07-27 19:11:49] 2025-07-27 23:11:17,075 | INFO     | . log creation = 0 s
[2025-07-27 19:11:49] 2025-07-27 23:11:17,076 | INFO     | ..............................
[2025-07-27 19:11:49] 2025-07-27 23:11:17,153 | INFO     | 
[2025-07-27 19:11:49] 2025-07-27 23:11:17,153 | INFO     | job summary report
[2025-07-27 19:11:49] 2025-07-27 23:11:17,153 | INFO     | --------------------------------------------------
[2025-07-27 19:11:49] 2025-07-27 23:11:17,153 | INFO     | PanDA job id: 6747411949
[2025-07-27 19:11:49] 2025-07-27 23:11:17,153 | INFO     | task id: 45743349
[2025-07-27 19:11:49] 2025-07-27 23:11:17,154 | INFO     | errors: (none)
[2025-07-27 19:11:49] 2025-07-27 23:11:17,154 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:11:49] 2025-07-27 23:11:17,154 | INFO     | pilot state: finished 
[2025-07-27 19:11:49] 2025-07-27 23:11:17,154 | INFO     | transexitcode: 0
[2025-07-27 19:11:49] 2025-07-27 23:11:17,154 | INFO     | exeerrorcode: 0
[2025-07-27 19:11:49] 2025-07-27 23:11:17,154 | INFO     | exeerrordiag: 
[2025-07-27 19:11:49] 2025-07-27 23:11:17,154 | INFO     | exitcode: 0
[2025-07-27 19:11:49] 2025-07-27 23:11:17,154 | INFO     | exitmsg: OK
[2025-07-27 19:11:49] 2025-07-27 23:11:17,154 | INFO     | cpuconsumptiontime: 43655 s
[2025-07-27 19:11:49] 2025-07-27 23:11:17,154 | INFO     | nevents: 400
[2025-07-27 19:11:49] 2025-07-27 23:11:17,154 | INFO     | neventsw: 0
[2025-07-27 19:11:49] 2025-07-27 23:11:17,154 | INFO     | pid: 3350328
[2025-07-27 19:11:49] 2025-07-27 23:11:17,154 | INFO     | pgrp: 3350328
[2025-07-27 19:11:49] 2025-07-27 23:11:17,154 | INFO     | corecount: 8
[2025-07-27 19:11:49] 2025-07-27 23:11:17,154 | INFO     | event service: False
[2025-07-27 19:11:49] 2025-07-27 23:11:17,154 | INFO     | sizes: {0: 2396596, 1: 2397452, 6: 2397714, 12: 2397742, 5885: 2424331, 5886: 2433329, 5889: 2433513, 5894: 2433707}
[2025-07-27 19:11:49] 2025-07-27 23:11:17,154 | INFO     | --------------------------------------------------
[2025-07-27 19:11:49] 2025-07-27 23:11:17,155 | INFO     | 
[2025-07-27 19:11:49] 2025-07-27 23:11:17,155 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 19:11:49] 2025-07-27 23:11:17,170 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,171 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,171 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,171 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,171 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,171 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,171 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,171 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,171 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,171 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,171 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,171 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,171 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,172 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,172 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,172 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,172 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,172 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:11:49] 2025-07-27 23:11:17,172 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,172 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:11:49] 2025-07-27 23:11:17,172 | INFO     | job 6747411949 has completed (purged errors)
[2025-07-27 19:11:49] 2025-07-27 23:11:17,172 | INFO     | overall cleanup function is called
[2025-07-27 19:11:49] 2025-07-27 23:11:18,180 | INFO     | --- collectZombieJob: --- 10, [3350328]
[2025-07-27 19:11:49] 2025-07-27 23:11:18,181 | INFO     | zombie collector waiting for pid 3350328
[2025-07-27 19:11:49] 2025-07-27 23:11:18,181 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:11:49] 2025-07-27 23:11:18,181 | INFO     | collected zombie processes
[2025-07-27 19:11:49] 2025-07-27 23:11:18,181 | INFO     | will attempt to kill all subprocesses of pid=3350328
[2025-07-27 19:11:49] 2025-07-27 23:11:18,500 | INFO     | process IDs to be killed: [3350328] (in reverse order)
[2025-07-27 19:11:49] 2025-07-27 23:11:18,587 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:11:49] 2025-07-27 23:11:18,588 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:11:49] 2025-07-27 23:11:18,601 | INFO     | did not find any defunct processes belonging to 3350328
[2025-07-27 19:11:49] 2025-07-27 23:11:18,615 | INFO     | did not find any defunct processes belonging to 3350328
[2025-07-27 19:11:49] 2025-07-27 23:11:18,615 | INFO     | ready for new job
[2025-07-27 19:11:49] 2025-07-27 23:11:18,615 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:11:49] 2025-07-27 23:11:18,616 | INFO     | ***************************************
[2025-07-27 19:11:49] 2025-07-27 23:11:18,617 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:11:49] 2025-07-27 23:11:18,617 | INFO     | ***************************************
[2025-07-27 19:11:49] 2025-07-27 23:11:18,617 | INFO     | 
[2025-07-27 19:11:49] 2025-07-27 23:11:18,632 | INFO     | architecture information:
[2025-07-27 19:11:49] 2025-07-27 23:11:18,633 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:11:49] 2025-07-27 23:11:18,648 | INFO     | cat /etc/os-release:
[2025-07-27 19:11:49] NAME="CentOS Linux"
[2025-07-27 19:11:49] VERSION="7 (Core)"
[2025-07-27 19:11:49] ID="centos"
[2025-07-27 19:11:49] ID_LIKE="rhel fedora"
[2025-07-27 19:11:49] VERSION_ID="7"
[2025-07-27 19:11:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:11:49] ANSI_COLOR="0;31"
[2025-07-27 19:11:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:11:49] HOME_URL="https://www.centos.org/"
[2025-07-27 19:11:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:11:49] 
[2025-07-27 19:11:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:11:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:11:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:11:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:11:49] 
[2025-07-27 19:11:49] 2025-07-27 23:11:18,651 | INFO     | ***************************************
[2025-07-27 19:11:49] 2025-07-27 23:11:19,154 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 19:11:49] 2025-07-27 23:11:19,165 | INFO     | sufficient remaining disk space (75455528960 B)
[2025-07-27 19:11:49] 2025-07-27 23:11:19,166 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:11:49] 2025-07-27 23:11:19,166 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:11:49] 2025-07-27 23:11:19,166 | INFO     | update_server=False
[2025-07-27 19:11:49] 2025-07-27 23:11:19,166 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:11:49] 2025-07-27 23:11:19,166 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:11:49] 2025-07-27 23:11:19,166 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:11:49] 2025-07-27 23:11:19,167 | INFO     | aborting loop
[2025-07-27 19:11:49] 2025-07-27 23:11:19,708 | INFO     | all job control threads have been joined
[2025-07-27 19:11:49] 2025-07-27 23:11:19,895 | INFO     | all data control threads have been joined
[2025-07-27 19:11:49] 2025-07-27 23:11:20,017 | INFO     | all payload control threads have been joined
[2025-07-27 19:11:49] 2025-07-27 23:11:20,079 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:11:49] 2025-07-27 23:11:20,171 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:11:49] 2025-07-27 23:11:20,172 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:11:49] 2025-07-27 23:11:20,703 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:11:49] 2025-07-27 23:11:20,713 | INFO     | [job] control thread has finished
[2025-07-27 19:11:49] 2025-07-27 23:11:20,728 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:11:49] 2025-07-27 23:11:20,901 | INFO     | [data] control thread has finished
[2025-07-27 19:11:49] 2025-07-27 23:11:21,023 | INFO     | [payload] control thread has finished
[2025-07-27 19:11:49] 2025-07-27 23:11:21,172 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:11:49] 2025-07-27 23:11:21,244 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:11:49] 2025-07-27 23:11:21,272 | INFO     | [job] validate thread has finished
[2025-07-27 19:11:49] 2025-07-27 23:11:21,445 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:11:49] 2025-07-27 23:11:21,597 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:11:49] 2025-07-27 23:11:22,084 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:11:49] 2025-07-27 23:11:22,162 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:11:49] 2025-07-27 23:11:23,167 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:11:49] 2025-07-27 23:11:23,171 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:11:49] 2025-07-27 23:11:30,209 | INFO     | job.realtimelogging is not enabled
[2025-07-27 19:11:49] 2025-07-27 23:11:31,213 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:11:49] 2025-07-27 23:11:31,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140120339621696)>', '<ExcThread(monitor, started 140119482824448)>']
[2025-07-27 19:11:49] 2025-07-27 23:11:36,387 | INFO     | all workflow threads have been joined
[2025-07-27 19:11:49] 2025-07-27 23:11:36,388 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:11:49] 2025-07-27 23:11:36,388 | INFO     | traces error code: 0
[2025-07-27 19:11:49] 2025-07-27 23:11:36,388 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:11:49] 2025-07-27 23:11:49,356 | INFO     | PID=3341920 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:11:49] 2025-07-27 23:11:49,357 | INFO     | .. there are 20 such processes running
[2025-07-27 19:11:49] 2025-07-27 23:11:49,357 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:11:49] 2025-07-27 23:11:49,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:11:49] 2025-07-27 23:11:49,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:11:49] 2025-07-27 23:11:49,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:11:49] 2025-07-27 23:11:49,357 | INFO     | [monitor] control thread has ended
[2025-07-27 19:11:49] 2025-07-27 23:11:49,498 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:11:49] 2025-07-27 23:11:49,501 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:11:49] 2025-07-27 23:11:49,504 [wrapper] pilotpid: 3341920
[2025-07-27 19:11:49] 2025-07-27 23:11:49,506 [wrapper] Pilot exit status: 0
[2025-07-27 19:11:49] 2025-07-27 23:11:49,515 [wrapper] pandaids: 6747411949
[2025-07-27 19:11:49] 2025-07-27 23:11:49,590 [wrapper] cleanup supervisor_pilot 3846648 3341921
[2025-07-27 19:11:49] 2025-07-27 23:11:49,593 [wrapper] Test setup, not cleaning
[2025-07-27 19:11:49] 2025-07-27 23:11:49,595 [wrapper] apfmon messages muted
[2025-07-27 19:11:49] 2025-07-27 23:11:49,598 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:11:49] 2025-07-27 23:11:49,601 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:11:49]  *** Error codes and diagnostics ***
[2025-07-27 19:11:49]     "exeErrorCode": 0,
[2025-07-27 19:11:49]     "exeErrorDiag": "",
[2025-07-27 19:11:49]     "pilotErrorCode": 0,
[2025-07-27 19:11:49]     "pilotErrorDiag": "",
[2025-07-27 19:11:49]  *** Listing of results directory ***
[2025-07-27 19:11:49] total 437960
[2025-07-27 19:11:49] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 09:04 pilot3.tar.gz
[2025-07-27 19:11:49] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 09:19 queuedata.json
[2025-07-27 19:11:49] -rwx------. 1 boincer umatlas     36292 Jul 27 09:19 runpilot2-wrapper.sh
[2025-07-27 19:11:49] -rw-r--r--. 1 boincer umatlas       100 Jul 27 17:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:11:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 17:32 run_atlas
[2025-07-27 19:11:49] -rw-r--r--. 1 boincer umatlas       105 Jul 27 17:32 job.xml
[2025-07-27 19:11:49] -rw-r--r--. 2 boincer umatlas 229620733 Jul 27 17:32 EVNT.45743347._002714.pool.root.1
[2025-07-27 19:11:49] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 17:32 input.tar.gz
[2025-07-27 19:11:49] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:32 start_atlas.sh
[2025-07-27 19:11:49] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 17:32 shared
[2025-07-27 19:11:49] -rw-r--r--. 1 boincer umatlas         0 Jul 27 17:32 boinc_lockfile
[2025-07-27 19:11:49] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 17:32 pandaJob.out
[2025-07-27 19:11:49] -rw-------. 1 boincer umatlas    980117 Jul 27 17:32 agis_schedconf.cvmfs.json
[2025-07-27 19:11:49] -rw-------. 1 boincer umatlas   1593052 Jul 27 17:32 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:11:49] drwx------. 4 boincer umatlas      4096 Jul 27 17:32 pilot3
[2025-07-27 19:11:49] -rw-r--r--. 1 boincer umatlas      6878 Jul 27 19:00 init_data.xml
[2025-07-27 19:11:49] -rw-------. 1 boincer umatlas 213198616 Jul 27 19:10 HITS.45743349._049082.pool.root.1
[2025-07-27 19:11:49] -rw-r--r--. 1 boincer umatlas       530 Jul 27 19:10 boinc_task_state.xml
[2025-07-27 19:11:49] -rw-------. 1 boincer umatlas        95 Jul 27 19:10 pilot_heartbeat.json
[2025-07-27 19:11:49] -rw-------. 1 boincer umatlas      1039 Jul 27 19:11 memory_monitor_summary.json
[2025-07-27 19:11:49] -rw-------. 1 boincer umatlas    319670 Jul 27 19:11 log.45743349._049082.job.log.tgz.1
[2025-07-27 19:11:49] -rw-------. 1 boincer umatlas      7823 Jul 27 19:11 heartbeat.json
[2025-07-27 19:11:49] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:11 boinc_mmap_file
[2025-07-27 19:11:49] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:11 wrapper_checkpoint.txt
[2025-07-27 19:11:49] -rw-------. 1 boincer umatlas       823 Jul 27 19:11 pilotlog.txt
[2025-07-27 19:11:49] -rw-------. 1 boincer umatlas    566270 Jul 27 19:11 log.45743349._049082.job.log.1
[2025-07-27 19:11:49] -rw-------. 1 boincer umatlas       357 Jul 27 19:11 output.list
[2025-07-27 19:11:49] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:11 runtime_log
[2025-07-27 19:11:49] -rw-------. 1 boincer umatlas    901120 Jul 27 19:11 result.tar.gz
[2025-07-27 19:11:49] -rw-------. 1 boincer umatlas       652 Jul 27 19:11 yp4MDmMTG07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0MVLDmP9hZ4m.diag
[2025-07-27 19:11:49] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 19:11 runtime_log.err
[2025-07-27 19:11:49] -rw-r--r--. 1 boincer umatlas     21667 Jul 27 19:11 stderr.txt
[2025-07-27 19:11:49] HITS file was successfully produced:
[2025-07-27 19:11:49] -rw-------. 1 boincer umatlas 213198616 Jul 27 19:10 shared/HITS.pool.root.1
[2025-07-27 19:11:49]  *** Contents of shared directory: ***
[2025-07-27 19:11:49] total 433880
[2025-07-27 19:11:49] -rw-r--r--. 2 boincer umatlas 229620733 Jul 27 17:32 ATLAS.root_0
[2025-07-27 19:11:49] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 17:32 input.tar.gz
[2025-07-27 19:11:49] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:32 start_atlas.sh
[2025-07-27 19:11:49] -rw-------. 1 boincer umatlas 213198616 Jul 27 19:10 HITS.pool.root.1
[2025-07-27 19:11:49] -rw-------. 1 boincer umatlas    901120 Jul 27 19:11 result.tar.gz
19:11:50 (3336574): run_atlas exited; CPU time 43912.690933
19:11:50 (3336574): called boinc_finish(0)

</stderr_txt>
]]>

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