Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:08:05 (1630809): wrapper (7.7.26015): starting
19:08:05 (1630809): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 19:08:05] Arguments: --nthreads 12
[2025-07-27 19:08:05] Threads: 12
[2025-07-27 19:08:05] Checking for CVMFS
[2025-07-27 19:08:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 19:08:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 19:08:05] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 19:08:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 19:08:06] 2.13.1.0 5053 11392 200796 148827 3 390 31626720 40960001 9661 16776704 0 12931560 99.866 14742451 47813 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 19:08:06] CVMFS is ok
[2025-07-27 19:08:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 19:08:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 19:08:06] Further information can be found at the LHC@home message board.
[2025-07-27 19:08:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 19:08:06] Checking for apptainer binary...
[2025-07-27 19:08:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 19:08:06] Running /usr/bin/apptainer --version
[2025-07-27 19:08:06] apptainer version 1.4.1-1.el9
[2025-07-27 19:08:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 19:08:06] c-210-33-1.aglt2.org
[2025-07-27 19:08:06] apptainer works
[2025-07-27 19:08:06] Set ATHENA_PROC_NUMBER=12
[2025-07-27 19:08:06] Set ATHENA_CORE_NUMBER=12
[2025-07-27 19:08:06] Starting ATLAS job with PandaID=6747525723
[2025-07-27 19:08:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:47:24]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:47:24]  replicas=None
[2025-07-27 20:47:24]  scope=mc23_13p6TeV
[2025-07-27 20:47:24]  status=None
[2025-07-27 20:47:24]  status_code=0
[2025-07-27 20:47:24]  storage_token=
[2025-07-27 20:47:24]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747525723/log.45743349._052270.job.log.tgz.1
[2025-07-27 20:47:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/52/log.45743349._052270.job.log.tgz.1
[2025-07-27 20:47:24]  workdir=None
[2025-07-27 20:47:24] ]
[2025-07-27 20:47:24] 2025-07-28 00:46:45,299 | INFO     | transferring file log.45743349._052270.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747525723/log.45743349._052270.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 20:47:24] 2025-07-28 00:46:45,300 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747525723/log.45743349._052270.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._052270.job
[2025-07-27 20:47:24] 2025-07-28 00:46:45,321 | INFO     | adding to output.list: log.45743349._052270.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/52/log.45743349._052270.job.log.tg
[2025-07-27 20:47:24] 2025-07-28 00:46:45,323 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 20:47:24] 2025-07-28 00:46:45,323 | INFO     | summary of transferred files:
[2025-07-27 20:47:24] 2025-07-28 00:46:45,323 | INFO     |  -- lfn=log.45743349._052270.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 20:47:24] 2025-07-28 00:46:45,323 | INFO     | stage-out finished correctly
[2025-07-27 20:47:24] 2025-07-28 00:46:46,121 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 20:47:24] 2025-07-28 00:46:46,814 | WARNING  | process 1640870 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 20:47:24] 2025-07-28 00:46:46,814 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747525723/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:47:24] 2025-07-28 00:46:46,982 | INFO     | number of running child processes to parent process 1640870: 1
[2025-07-27 20:47:24] 2025-07-28 00:46:46,982 | INFO     | maximum number of monitored processes: 6
[2025-07-27 20:47:24] 2025-07-28 00:46:47,206 | INFO     | job 6747525723 has state=finished
[2025-07-27 20:47:24] 2025-07-28 00:46:47,207 | INFO     | preparing for final server update for job 6747525723 in state='finished'
[2025-07-27 20:47:24] 2025-07-28 00:46:47,208 | INFO     | this job has now completed (state=finished)
[2025-07-27 20:47:24] 2025-07-28 00:46:47,208 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 20:47:24] 2025-07-28 00:46:47,208 | INFO     | log transfer has been attempted: DONE
[2025-07-27 20:47:24] 2025-07-28 00:46:47,209 | INFO     | job 6747525723 has finished - writing final server update
[2025-07-27 20:47:24] 2025-07-28 00:46:47,209 | INFO     | total number of processed events: 400 (read)
[2025-07-27 20:47:24] 2025-07-28 00:46:47,210 | INFO     | executing command: lscpu
[2025-07-27 20:47:24] 2025-07-28 00:46:47,253 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 20:47:24] 2025-07-28 00:46:49,485 | INFO     | monitor loop #417: job 0:6747525723 is in state 'finished'
[2025-07-27 20:47:24] 2025-07-28 00:46:49,485 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:47:24] 2025-07-28 00:46:51,987 | INFO     | monitor loop #418: job 0:6747525723 is in state 'finished'
[2025-07-27 20:47:24] 2025-07-28 00:46:51,988 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:47:24] 2025-07-28 00:46:52,048 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 20:47:24] 2025-07-28 00:46:52,055 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2463.54575
[2025-07-27 20:47:24] 2025-07-28 00:46:52,064 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747525723/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:47:24] 2025-07-28 00:46:52,064 | INFO     | extracted standard info from prmon json
[2025-07-27 20:47:24] 2025-07-28 00:46:52,064 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:47:24] 2025-07-28 00:46:52,064 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:47:24] 2025-07-28 00:46:52,065 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:47:24] 2025-07-28 00:46:52,065 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:47:24] 2025-07-28 00:46:52,067 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:47:24] 2025-07-28 00:46:52,067 | INFO     | sum of square deviations: 226013827.65555552
[2025-07-27 20:47:24] 2025-07-28 00:46:52,068 | INFO     | sum of deviations: 869558706.7888889
[2025-07-27 20:47:24] 2025-07-28 00:46:52,068 | INFO     | mean x: 1753660752.6777778
[2025-07-27 20:47:24] 2025-07-28 00:46:52,068 | INFO     | mean y: 2725054.5444444446
[2025-07-27 20:47:24] 2025-07-28 00:46:52,068 | INFO     | -- intersect: -6744255836.239276
[2025-07-27 20:47:24] 2025-07-28 00:46:52,068 | INFO     | intersect: -6744255836.239276
[2025-07-27 20:47:24] 2025-07-28 00:46:52,068 | INFO     | chi2: 0.03148527237885347
[2025-07-27 20:47:24] 2025-07-28 00:46:52,068 | INFO     | -- intersect: -6744255836.239276
[2025-07-27 20:47:24] 2025-07-28 00:46:52,068 | INFO     | current memory leak: 3.85 B/s (using 90 data points, chi2=0.03)
[2025-07-27 20:47:24] 2025-07-28 00:46:52,069 | INFO     | could have reported an average CPU frequency of 2542 MHz (7 samples)
[2025-07-27 20:47:24] 2025-07-28 00:46:52,069 | INFO     | ..............................
[2025-07-27 20:47:24] 2025-07-28 00:46:52,069 | INFO     | . Timing measurements:
[2025-07-27 20:47:24] 2025-07-28 00:46:52,069 | INFO     | . get job = 0 s
[2025-07-27 20:47:24] 2025-07-28 00:46:52,069 | INFO     | . initial setup = 2 s
[2025-07-27 20:47:24] 2025-07-28 00:46:52,069 | INFO     | . payload setup = 9 s
[2025-07-27 20:47:24] 2025-07-28 00:46:52,069 | INFO     | . stage-in = 0 s
[2025-07-27 20:47:24] 2025-07-28 00:46:52,069 | INFO     | . payload execution = 5874 s
[2025-07-27 20:47:24] 2025-07-28 00:46:52,069 | INFO     | . stage-out = 0 s
[2025-07-27 20:47:24] 2025-07-28 00:46:52,069 | INFO     | . log creation = 0 s
[2025-07-27 20:47:24] 2025-07-28 00:46:52,069 | INFO     | ..............................
[2025-07-27 20:47:24] 2025-07-28 00:46:52,158 | INFO     | 
[2025-07-27 20:47:24] 2025-07-28 00:46:52,158 | INFO     | job summary report
[2025-07-27 20:47:24] 2025-07-28 00:46:52,158 | INFO     | --------------------------------------------------
[2025-07-27 20:47:24] 2025-07-28 00:46:52,159 | INFO     | PanDA job id: 6747525723
[2025-07-27 20:47:24] 2025-07-28 00:46:52,159 | INFO     | task id: 45743349
[2025-07-27 20:47:24] 2025-07-28 00:46:52,159 | INFO     | errors: (none)
[2025-07-27 20:47:24] 2025-07-28 00:46:52,159 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:47:24] 2025-07-28 00:46:52,159 | INFO     | pilot state: finished 
[2025-07-27 20:47:24] 2025-07-28 00:46:52,159 | INFO     | transexitcode: 0
[2025-07-27 20:47:24] 2025-07-28 00:46:52,159 | INFO     | exeerrorcode: 0
[2025-07-27 20:47:24] 2025-07-28 00:46:52,159 | INFO     | exeerrordiag: 
[2025-07-27 20:47:24] 2025-07-28 00:46:52,159 | INFO     | exitcode: 0
[2025-07-27 20:47:24] 2025-07-28 00:46:52,159 | INFO     | exitmsg: OK
[2025-07-27 20:47:24] 2025-07-28 00:46:52,159 | INFO     | cpuconsumptiontime: 49396 s
[2025-07-27 20:47:24] 2025-07-28 00:46:52,159 | INFO     | nevents: 400
[2025-07-27 20:47:24] 2025-07-28 00:46:52,159 | INFO     | neventsw: 0
[2025-07-27 20:47:24] 2025-07-28 00:46:52,159 | INFO     | pid: 1640870
[2025-07-27 20:47:24] 2025-07-28 00:46:52,160 | INFO     | pgrp: 1640870
[2025-07-27 20:47:24] 2025-07-28 00:46:52,160 | INFO     | corecount: 12
[2025-07-27 20:47:24] 2025-07-28 00:46:52,160 | INFO     | event service: False
[2025-07-27 20:47:24] 2025-07-28 00:46:52,160 | INFO     | sizes: {0: 2397475, 7: 2397737, 11: 2397765, 5887: 2424496, 5889: 2433494, 5890: 2433550, 5896: 2433872}
[2025-07-27 20:47:24] 2025-07-28 00:46:52,160 | INFO     | --------------------------------------------------
[2025-07-27 20:47:24] 2025-07-28 00:46:52,160 | INFO     | 
[2025-07-27 20:47:24] 2025-07-28 00:46:52,160 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 20:47:24] 2025-07-28 00:46:52,185 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,185 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,185 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,185 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,186 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,186 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,186 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,186 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,186 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,186 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,186 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,186 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,186 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,186 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,186 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:47:24] 2025-07-28 00:46:52,187 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,187 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:47:24] 2025-07-28 00:46:52,187 | INFO     | job 6747525723 has completed (purged errors)
[2025-07-27 20:47:24] 2025-07-28 00:46:52,187 | INFO     | overall cleanup function is called
[2025-07-27 20:47:24] 2025-07-28 00:46:53,194 | INFO     | --- collectZombieJob: --- 10, [1640870]
[2025-07-27 20:47:24] 2025-07-28 00:46:53,195 | INFO     | zombie collector waiting for pid 1640870
[2025-07-27 20:47:24] 2025-07-28 00:46:53,195 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:47:24] 2025-07-28 00:46:53,195 | INFO     | collected zombie processes
[2025-07-27 20:47:24] 2025-07-28 00:46:53,195 | INFO     | will attempt to kill all subprocesses of pid=1640870
[2025-07-27 20:47:24] 2025-07-28 00:46:53,406 | INFO     | process IDs to be killed: [1640870] (in reverse order)
[2025-07-27 20:47:24] 2025-07-28 00:46:53,499 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:47:24] 2025-07-28 00:46:53,499 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:47:24] 2025-07-28 00:46:53,510 | INFO     | did not find any defunct processes belonging to 1640870
[2025-07-27 20:47:24] 2025-07-28 00:46:53,520 | INFO     | did not find any defunct processes belonging to 1640870
[2025-07-27 20:47:24] 2025-07-28 00:46:53,520 | INFO     | ready for new job
[2025-07-27 20:47:24] 2025-07-28 00:46:53,520 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:47:24] 2025-07-28 00:46:53,522 | INFO     | ***************************************
[2025-07-27 20:47:24] 2025-07-28 00:46:53,524 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:47:24] 2025-07-28 00:46:53,524 | INFO     | ***************************************
[2025-07-27 20:47:24] 2025-07-28 00:46:53,524 | INFO     | 
[2025-07-27 20:47:24] 2025-07-28 00:46:53,527 | INFO     | architecture information:
[2025-07-27 20:47:24] 2025-07-28 00:46:53,528 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:47:24] 2025-07-28 00:46:53,547 | INFO     | cat /etc/os-release:
[2025-07-27 20:47:24] NAME="CentOS Linux"
[2025-07-27 20:47:24] VERSION="7 (Core)"
[2025-07-27 20:47:24] ID="centos"
[2025-07-27 20:47:24] ID_LIKE="rhel fedora"
[2025-07-27 20:47:24] VERSION_ID="7"
[2025-07-27 20:47:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:47:24] ANSI_COLOR="0;31"
[2025-07-27 20:47:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:47:24] HOME_URL="https://www.centos.org/"
[2025-07-27 20:47:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:47:24] 
[2025-07-27 20:47:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:47:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:47:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:47:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:47:24] 
[2025-07-27 20:47:24] 2025-07-28 00:46:53,548 | INFO     | ***************************************
[2025-07-27 20:47:24] 2025-07-28 00:46:54,051 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 20:47:24] 2025-07-28 00:46:54,069 | INFO     | sufficient remaining disk space (75533123584 B)
[2025-07-27 20:47:24] 2025-07-28 00:46:54,069 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:47:24] 2025-07-28 00:46:54,070 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:47:24] 2025-07-28 00:46:54,070 | INFO     | update_server=False
[2025-07-27 20:47:24] 2025-07-28 00:46:54,070 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:47:24] 2025-07-28 00:46:54,070 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:47:24] 2025-07-28 00:46:54,070 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:47:24] 2025-07-28 00:46:54,166 | INFO     | all payload control threads have been joined
[2025-07-27 20:47:24] 2025-07-28 00:46:54,342 | INFO     | all data control threads have been joined
[2025-07-27 20:47:24] 2025-07-28 00:46:54,468 | INFO     | all job control threads have been joined
[2025-07-27 20:47:24] 2025-07-28 00:46:54,490 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 20:47:24] 2025-07-28 00:46:54,491 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 20:47:24] 2025-07-28 00:46:54,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:47:24] 2025-07-28 00:46:54,491 | INFO     | will abort loop
[2025-07-27 20:47:24] 2025-07-28 00:46:55,075 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:47:24] 2025-07-28 00:46:55,076 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:47:24] 2025-07-28 00:46:55,172 | INFO     | [payload] control thread has finished
[2025-07-27 20:47:24] 2025-07-28 00:46:55,348 | INFO     | [data] control thread has finished
[2025-07-27 20:47:24] 2025-07-28 00:46:55,438 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:47:24] 2025-07-28 00:46:55,473 | INFO     | [job] control thread has finished
[2025-07-27 20:47:24] 2025-07-28 00:46:55,496 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:47:24] 2025-07-28 00:46:55,618 | INFO     | [job] validate thread has finished
[2025-07-27 20:47:24] 2025-07-28 00:46:55,802 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:47:24] 2025-07-28 00:46:55,853 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:47:24] 2025-07-28 00:46:55,868 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:47:24] 2025-07-28 00:46:56,063 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:47:24] 2025-07-28 00:46:56,076 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:47:24] 2025-07-28 00:46:56,521 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:47:24] 2025-07-28 00:46:56,715 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:47:24] 2025-07-28 00:47:00,720 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:47:24] 2025-07-28 00:47:04,609 | INFO     | job.realtimelogging is not enabled
[2025-07-27 20:47:24] 2025-07-28 00:47:05,613 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:47:24] 2025-07-28 00:47:07,003 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321228900160)>', '<ExcThread(monitor, started 140320591304448)>']
[2025-07-27 20:47:24] 2025-07-28 00:47:12,027 | INFO     | all workflow threads have been joined
[2025-07-27 20:47:24] 2025-07-28 00:47:12,028 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:47:24] 2025-07-28 00:47:12,028 | INFO     | traces error code: 0
[2025-07-27 20:47:24] 2025-07-28 00:47:12,028 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:47:24] 2025-07-28 00:47:23,707 | INFO     | PID=1634381 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 20:47:24] 2025-07-28 00:47:23,707 | INFO     | .. there are 8 such processes running
[2025-07-27 20:47:24] 2025-07-28 00:47:23,708 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:47:24] 2025-07-28 00:47:23,709 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:47:24] 2025-07-28 00:47:23,709 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:47:24] 2025-07-28 00:47:23,709 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:47:24] 2025-07-28 00:47:23,709 | INFO     | [monitor] control thread has ended
[2025-07-27 20:47:24] 2025-07-28 00:47:23,856 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:47:24] 2025-07-28 00:47:23,860 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:47:24] 2025-07-28 00:47:23,864 [wrapper] pilotpid: 1634381
[2025-07-27 20:47:24] 2025-07-28 00:47:23,868 [wrapper] Pilot exit status: 0
[2025-07-27 20:47:24] 2025-07-28 00:47:23,882 [wrapper] pandaids: 6747525723
[2025-07-27 20:47:24] 2025-07-28 00:47:23,937 [wrapper] cleanup supervisor_pilot 1759403 1634382
[2025-07-27 20:47:24] 2025-07-28 00:47:23,940 [wrapper] Test setup, not cleaning
[2025-07-27 20:47:24] 2025-07-28 00:47:23,946 [wrapper] apfmon messages muted
[2025-07-27 20:47:24] 2025-07-28 00:47:23,949 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:47:24] 2025-07-28 00:47:23,953 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:47:24]  *** Error codes and diagnostics ***
[2025-07-27 20:47:24]     "exeErrorCode": 0,
[2025-07-27 20:47:24]     "exeErrorDiag": "",
[2025-07-27 20:47:24]     "pilotErrorCode": 0,
[2025-07-27 20:47:24]     "pilotErrorDiag": "",
[2025-07-27 20:47:24]  *** Listing of results directory ***
[2025-07-27 20:47:24] total 348756
[2025-07-27 20:47:24] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:02 pilot3.tar.gz
[2025-07-27 20:47:24] -rwx------. 1 boincer umatlas     36292 Jul 27 12:13 runpilot2-wrapper.sh
[2025-07-27 20:47:24] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 12:13 queuedata.json
[2025-07-27 20:47:24] -rw-r--r--. 1 boincer umatlas       100 Jul 27 19:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:47:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 19:08 run_atlas
[2025-07-27 20:47:24] -rw-r--r--. 1 boincer umatlas       105 Jul 27 19:08 job.xml
[2025-07-27 20:47:24] -rw-r--r--. 2 boincer umatlas 146686383 Jul 27 19:08 EVNT.45743347._002878.pool.root.1
[2025-07-27 20:47:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 19:08 start_atlas.sh
[2025-07-27 20:47:24] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 19:08 shared
[2025-07-27 20:47:24] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 19:08 input.tar.gz
[2025-07-27 20:47:24] -rw-r--r--. 1 boincer umatlas         0 Jul 27 19:08 boinc_lockfile
[2025-07-27 20:47:24] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 19:08 pandaJob.out
[2025-07-27 20:47:24] -rw-------. 1 boincer umatlas    980109 Jul 27 19:08 agis_schedconf.cvmfs.json
[2025-07-27 20:47:24] -rw-------. 1 boincer umatlas   1593052 Jul 27 19:08 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:47:24] drwx------. 4 boincer umatlas      4096 Jul 27 19:08 pilot3
[2025-07-27 20:47:24] -rw-r--r--. 1 boincer umatlas      6840 Jul 27 20:39 init_data.xml
[2025-07-27 20:47:24] -rw-------. 1 boincer umatlas 204682805 Jul 27 20:46 HITS.45743349._052270.pool.root.1
[2025-07-27 20:47:24] -rw-r--r--. 1 boincer umatlas       530 Jul 27 20:46 boinc_task_state.xml
[2025-07-27 20:47:24] -rw-------. 1 boincer umatlas      1036 Jul 27 20:46 memory_monitor_summary.json
[2025-07-27 20:47:24] -rw-------. 1 boincer umatlas    379146 Jul 27 20:46 log.45743349._052270.job.log.tgz.1
[2025-07-27 20:47:24] -rw-------. 1 boincer umatlas      7817 Jul 27 20:46 heartbeat.json
[2025-07-27 20:47:24] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 20:47 boinc_mmap_file
[2025-07-27 20:47:24] -rw-r--r--. 1 boincer umatlas        27 Jul 27 20:47 wrapper_checkpoint.txt
[2025-07-27 20:47:24] -rw-------. 1 boincer umatlas        95 Jul 27 20:47 pilot_heartbeat.json
[2025-07-27 20:47:24] -rw-------. 1 boincer umatlas       822 Jul 27 20:47 pilotlog.txt
[2025-07-27 20:47:24] -rw-------. 1 boincer umatlas    560508 Jul 27 20:47 log.45743349._052270.job.log.1
[2025-07-27 20:47:24] -rw-------. 1 boincer umatlas       357 Jul 27 20:47 output.list
[2025-07-27 20:47:24] -rw-r--r--. 1 boincer umatlas       620 Jul 27 20:47 runtime_log
[2025-07-27 20:47:24] -rw-------. 1 boincer umatlas    962560 Jul 27 20:47 result.tar.gz
[2025-07-27 20:47:24] -rw-------. 1 boincer umatlas       655 Jul 27 20:47 yCHKDmTBJ07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdoVLDmRBV4tm.diag
[2025-07-27 20:47:24] -rw-r--r--. 1 boincer umatlas      8672 Jul 27 20:47 runtime_log.err
[2025-07-27 20:47:24] -rw-r--r--. 1 boincer umatlas     21877 Jul 27 20:47 stderr.txt
[2025-07-27 20:47:24] HITS file was successfully produced:
[2025-07-27 20:47:24] -rw-------. 1 boincer umatlas 204682805 Jul 27 20:46 shared/HITS.pool.root.1
[2025-07-27 20:47:24]  *** Contents of shared directory: ***
[2025-07-27 20:47:24] total 344632
[2025-07-27 20:47:24] -rw-r--r--. 2 boincer umatlas 146686383 Jul 27 19:08 ATLAS.root_0
[2025-07-27 20:47:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 19:08 start_atlas.sh
[2025-07-27 20:47:24] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 19:08 input.tar.gz
[2025-07-27 20:47:24] -rw-------. 1 boincer umatlas 204682805 Jul 27 20:46 HITS.pool.root.1
[2025-07-27 20:47:24] -rw-------. 1 boincer umatlas    962560 Jul 27 20:47 result.tar.gz
20:47:45 (1630809): run_atlas exited; CPU time 49482.043647
20:47:45 (1630809): called boinc_finish(0)

</stderr_txt>
]]>

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