Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:31:21 (3085): wrapper (7.7.26015): starting
17:31:21 (3085): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 17:31:21] Arguments: --nthreads 12
[2025-07-27 17:31:21] Threads: 12
[2025-07-27 17:31:21] Checking for CVMFS
[2025-07-27 17:31:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:31:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:31:21] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:31:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:31:21] 2.11.2.0 2991 112499 94432 148825 2 57 13868749 20275200 1 130560 0 39631984 99.970 9955768 10829 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 17:31:21] CVMFS is ok
[2025-07-27 17:31:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:31:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:31:21] Further information can be found at the LHC@home message board.
[2025-07-27 17:31:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:31:21] Checking for apptainer binary...
[2025-07-27 17:31:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:31:21] Running /usr/bin/apptainer --version
[2025-07-27 17:31:21] apptainer version 1.3.2-1.el7
[2025-07-27 17:31:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:31:23] c-205-32.aglt2.org
[2025-07-27 17:31:23] apptainer works
[2025-07-27 17:31:23] Set ATHENA_PROC_NUMBER=12
[2025-07-27 17:31:23] Set ATHENA_CORE_NUMBER=12
[2025-07-27 17:31:23] Starting ATLAS job with PandaID=6747525541
[2025-07-27 17:31:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 18:53:22]  *** The last 200 lines of the pilot log: ***
[2025-07-27 18:53:22]  replicas=None
[2025-07-27 18:53:22]  scope=mc23_13p6TeV
[2025-07-27 18:53:22]  status=None
[2025-07-27 18:53:22]  status_code=0
[2025-07-27 18:53:22]  storage_token=
[2025-07-27 18:53:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747525541/log.45743349._052088.job.log.tgz.1
[2025-07-27 18:53:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/30/log.45743349._052088.job.log.tgz.1
[2025-07-27 18:53:22]  workdir=None
[2025-07-27 18:53:22] ]
[2025-07-27 18:53:22] 2025-07-27 22:52:41,129 | INFO     | transferring file log.45743349._052088.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747525541/log.45743349._052088.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 18:53:22] 2025-07-27 22:52:41,129 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747525541/log.45743349._052088.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._052088.job
[2025-07-27 18:53:22] 2025-07-27 22:52:41,152 | INFO     | adding to output.list: log.45743349._052088.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/30/log.45743349._052088.job.log.tg
[2025-07-27 18:53:22] 2025-07-27 22:52:41,153 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 18:53:22] 2025-07-27 22:52:41,153 | INFO     | summary of transferred files:
[2025-07-27 18:53:22] 2025-07-27 22:52:41,153 | INFO     |  -- lfn=log.45743349._052088.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 18:53:22] 2025-07-27 22:52:41,154 | INFO     | stage-out finished correctly
[2025-07-27 18:53:22] 2025-07-27 22:52:42,556 | INFO     | 4869s have passed since pilot start - server update state is 'RUNNING'
[2025-07-27 18:53:22] 2025-07-27 22:52:43,589 | WARNING  | process 13135 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 18:53:22] 2025-07-27 22:52:43,589 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747525541/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:53:22] 2025-07-27 22:52:43,675 | INFO     | number of running child processes to parent process 13135: 1
[2025-07-27 18:53:22] 2025-07-27 22:52:43,675 | INFO     | maximum number of monitored processes: 6
[2025-07-27 18:53:22] 2025-07-27 22:52:44,198 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 18:53:22] 2025-07-27 22:52:44,282 | INFO     | job 6747525541 has state=finished
[2025-07-27 18:53:22] 2025-07-27 22:52:44,283 | INFO     | preparing for final server update for job 6747525541 in state='finished'
[2025-07-27 18:53:22] 2025-07-27 22:52:44,283 | INFO     | this job has now completed (state=finished)
[2025-07-27 18:53:22] 2025-07-27 22:52:44,283 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 18:53:22] 2025-07-27 22:52:44,284 | INFO     | log transfer has been attempted: DONE
[2025-07-27 18:53:22] 2025-07-27 22:52:44,284 | INFO     | job 6747525541 has finished - writing final server update
[2025-07-27 18:53:22] 2025-07-27 22:52:44,284 | INFO     | total number of processed events: 400 (read)
[2025-07-27 18:53:22] 2025-07-27 22:52:44,285 | INFO     | executing command: lscpu
[2025-07-27 18:53:22] 2025-07-27 22:52:44,310 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 18:53:22] 2025-07-27 22:52:46,178 | INFO     | monitor loop #363: job 0:6747525541 is in state 'finished'
[2025-07-27 18:53:22] 2025-07-27 22:52:46,178 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:53:22] 2025-07-27 22:52:48,697 | INFO     | monitor loop #364: job 0:6747525541 is in state 'finished'
[2025-07-27 18:53:22] 2025-07-27 22:52:48,697 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:53:22] 2025-07-27 22:52:49,102 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 18:53:22] 2025-07-27 22:52:49,105 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-07-27 18:53:22] 2025-07-27 22:52:49,108 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747525541/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:53:22] 2025-07-27 22:52:49,108 | INFO     | extracted standard info from prmon json
[2025-07-27 18:53:22] 2025-07-27 22:52:49,109 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 18:53:22] 2025-07-27 22:52:49,109 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 18:53:22] 2025-07-27 22:52:49,109 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 18:53:22] 2025-07-27 22:52:49,109 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 18:53:22] 2025-07-27 22:52:49,111 | INFO     | fitting pss+swap vs Time
[2025-07-27 18:53:22] 2025-07-27 22:52:49,111 | INFO     | sum of square deviations: 120605052.0
[2025-07-27 18:53:22] 2025-07-27 22:52:49,111 | INFO     | sum of deviations: -9820364990.0
[2025-07-27 18:53:22] 2025-07-27 22:52:49,111 | INFO     | mean x: 1753654427.0
[2025-07-27 18:53:22] 2025-07-27 22:52:49,112 | INFO     | mean y: 2794170.671232877
[2025-07-27 18:53:22] 2025-07-27 22:52:49,112 | INFO     | -- intersect: 142795540029.02307
[2025-07-27 18:53:22] 2025-07-27 22:52:49,112 | INFO     | intersect: 142795540029.02307
[2025-07-27 18:53:22] 2025-07-27 22:52:49,112 | INFO     | chi2: 0.05903619608393281
[2025-07-27 18:53:22] 2025-07-27 22:52:49,112 | INFO     | -- intersect: 142795540029.02307
[2025-07-27 18:53:22] 2025-07-27 22:52:49,112 | INFO     | current memory leak: -81.43 B/s (using 73 data points, chi2=0.06)
[2025-07-27 18:53:22] 2025-07-27 22:52:49,112 | INFO     | could have reported an average CPU frequency of 2032 MHz (6 samples)
[2025-07-27 18:53:22] 2025-07-27 22:52:49,113 | INFO     | ..............................
[2025-07-27 18:53:22] 2025-07-27 22:52:49,113 | INFO     | . Timing measurements:
[2025-07-27 18:53:22] 2025-07-27 22:52:49,113 | INFO     | . get job = 0 s
[2025-07-27 18:53:22] 2025-07-27 22:52:49,113 | INFO     | . initial setup = 2 s
[2025-07-27 18:53:22] 2025-07-27 22:52:49,113 | INFO     | . payload setup = 9 s
[2025-07-27 18:53:22] 2025-07-27 22:52:49,113 | INFO     | . stage-in = 0 s
[2025-07-27 18:53:22] 2025-07-27 22:52:49,113 | INFO     | . payload execution = 4836 s
[2025-07-27 18:53:22] 2025-07-27 22:52:49,113 | INFO     | . stage-out = 0 s
[2025-07-27 18:53:22] 2025-07-27 22:52:49,113 | INFO     | . log creation = 0 s
[2025-07-27 18:53:22] 2025-07-27 22:52:49,114 | INFO     | ..............................
[2025-07-27 18:53:22] 2025-07-27 22:52:49,302 | INFO     | 
[2025-07-27 18:53:22] 2025-07-27 22:52:49,302 | INFO     | job summary report
[2025-07-27 18:53:22] 2025-07-27 22:52:49,302 | INFO     | --------------------------------------------------
[2025-07-27 18:53:22] 2025-07-27 22:52:49,302 | INFO     | PanDA job id: 6747525541
[2025-07-27 18:53:22] 2025-07-27 22:52:49,302 | INFO     | task id: 45743349
[2025-07-27 18:53:22] 2025-07-27 22:52:49,303 | INFO     | errors: (none)
[2025-07-27 18:53:22] 2025-07-27 22:52:49,303 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 18:53:22] 2025-07-27 22:52:49,303 | INFO     | pilot state: finished 
[2025-07-27 18:53:22] 2025-07-27 22:52:49,303 | INFO     | transexitcode: 0
[2025-07-27 18:53:22] 2025-07-27 22:52:49,303 | INFO     | exeerrorcode: 0
[2025-07-27 18:53:22] 2025-07-27 22:52:49,303 | INFO     | exeerrordiag: 
[2025-07-27 18:53:22] 2025-07-27 22:52:49,303 | INFO     | exitcode: 0
[2025-07-27 18:53:22] 2025-07-27 22:52:49,304 | INFO     | exitmsg: OK
[2025-07-27 18:53:22] 2025-07-27 22:52:49,304 | INFO     | cpuconsumptiontime: 52635 s
[2025-07-27 18:53:22] 2025-07-27 22:52:49,304 | INFO     | nevents: 400
[2025-07-27 18:53:22] 2025-07-27 22:52:49,304 | INFO     | neventsw: 0
[2025-07-27 18:53:22] 2025-07-27 22:52:49,304 | INFO     | pid: 13135
[2025-07-27 18:53:22] 2025-07-27 22:52:49,305 | INFO     | pgrp: 13135
[2025-07-27 18:53:22] 2025-07-27 22:52:49,305 | INFO     | corecount: 12
[2025-07-27 18:53:22] 2025-07-27 22:52:49,305 | INFO     | event service: False
[2025-07-27 18:53:22] 2025-07-27 22:52:49,305 | INFO     | sizes: {0: 2397469, 5: 2397731, 11: 2397787, 4848: 2424030, 4849: 2433028, 4852: 2433084, 4857: 2433406}
[2025-07-27 18:53:22] 2025-07-27 22:52:49,305 | INFO     | --------------------------------------------------
[2025-07-27 18:53:22] 2025-07-27 22:52:49,305 | INFO     | 
[2025-07-27 18:53:22] 2025-07-27 22:52:49,306 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 18:53:22] 2025-07-27 22:52:49,432 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,433 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,433 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,433 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,433 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,433 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,434 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,434 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,434 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,434 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,434 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,434 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,435 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,435 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,435 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,435 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,435 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,435 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 18:53:22] 2025-07-27 22:52:49,436 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,436 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 18:53:22] 2025-07-27 22:52:49,436 | INFO     | job 6747525541 has completed (purged errors)
[2025-07-27 18:53:22] 2025-07-27 22:52:49,436 | INFO     | overall cleanup function is called
[2025-07-27 18:53:22] 2025-07-27 22:52:50,444 | INFO     | --- collectZombieJob: --- 10, [13135]
[2025-07-27 18:53:22] 2025-07-27 22:52:50,444 | INFO     | zombie collector waiting for pid 13135
[2025-07-27 18:53:22] 2025-07-27 22:52:50,444 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 18:53:22] 2025-07-27 22:52:50,444 | INFO     | collected zombie processes
[2025-07-27 18:53:22] 2025-07-27 22:52:50,445 | INFO     | will attempt to kill all subprocesses of pid=13135
[2025-07-27 18:53:22] 2025-07-27 22:52:50,534 | INFO     | process IDs to be killed: [13135] (in reverse order)
[2025-07-27 18:53:22] 2025-07-27 22:52:50,584 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 18:53:22] 2025-07-27 22:52:50,585 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 18:53:22] 2025-07-27 22:52:50,588 | INFO     | did not find any defunct processes belonging to 13135
[2025-07-27 18:53:22] 2025-07-27 22:52:50,590 | INFO     | did not find any defunct processes belonging to 13135
[2025-07-27 18:53:22] 2025-07-27 22:52:50,590 | INFO     | ready for new job
[2025-07-27 18:53:22] 2025-07-27 22:52:50,591 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 18:53:22] 2025-07-27 22:52:50,592 | INFO     | ***************************************
[2025-07-27 18:53:22] 2025-07-27 22:52:50,592 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 18:53:22] 2025-07-27 22:52:50,592 | INFO     | ***************************************
[2025-07-27 18:53:22] 2025-07-27 22:52:50,592 | INFO     | 
[2025-07-27 18:53:22] 2025-07-27 22:52:50,593 | INFO     | architecture information:
[2025-07-27 18:53:22] 2025-07-27 22:52:50,593 | INFO     | executing command: cat /etc/os-release
[2025-07-27 18:53:22] 2025-07-27 22:52:50,608 | INFO     | cat /etc/os-release:
[2025-07-27 18:53:22] NAME="CentOS Linux"
[2025-07-27 18:53:22] VERSION="7 (Core)"
[2025-07-27 18:53:22] ID="centos"
[2025-07-27 18:53:22] ID_LIKE="rhel fedora"
[2025-07-27 18:53:22] VERSION_ID="7"
[2025-07-27 18:53:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 18:53:22] ANSI_COLOR="0;31"
[2025-07-27 18:53:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 18:53:22] HOME_URL="https://www.centos.org/"
[2025-07-27 18:53:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 18:53:22] 
[2025-07-27 18:53:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 18:53:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 18:53:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 18:53:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 18:53:22] 
[2025-07-27 18:53:22] 2025-07-27 22:52:50,608 | INFO     | ***************************************
[2025-07-27 18:53:22] 2025-07-27 22:52:51,111 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 18:53:22] 2025-07-27 22:52:51,127 | INFO     | sufficient remaining disk space (29513220096 B)
[2025-07-27 18:53:22] 2025-07-27 22:52:51,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 18:53:22] 2025-07-27 22:52:51,128 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 18:53:22] 2025-07-27 22:52:51,128 | INFO     | update_server=False
[2025-07-27 18:53:22] 2025-07-27 22:52:51,128 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 18:53:22] 2025-07-27 22:52:51,129 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:53:22] 2025-07-27 22:52:51,129 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 18:53:22] 2025-07-27 22:52:51,200 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 18:53:22] 2025-07-27 22:52:51,201 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 18:53:22] 2025-07-27 22:52:51,211 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:53:22] 2025-07-27 22:52:51,211 | INFO     | will abort loop
[2025-07-27 18:53:22] 2025-07-27 22:52:51,324 | INFO     | all data control threads have been joined
[2025-07-27 18:53:22] 2025-07-27 22:52:51,617 | INFO     | all job control threads have been joined
[2025-07-27 18:53:22] 2025-07-27 22:52:51,756 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 18:53:22] 2025-07-27 22:52:52,134 | INFO     | [job] retrieve thread has finished
[2025-07-27 18:53:22] 2025-07-27 22:52:52,135 | INFO     | [job] queue monitor thread has finished
[2025-07-27 18:53:22] 2025-07-27 22:52:52,145 | INFO     | [job] validate thread has finished
[2025-07-27 18:53:22] 2025-07-27 22:52:52,217 | INFO     | [job] job monitor thread has finished
[2025-07-27 18:53:22] 2025-07-27 22:52:52,330 | INFO     | [data] control thread has finished
[2025-07-27 18:53:22] 2025-07-27 22:52:52,407 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 18:53:22] 2025-07-27 22:52:52,422 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 18:53:22] 2025-07-27 22:52:52,521 | INFO     | [payload] validate_post thread has finished
[2025-07-27 18:53:22] 2025-07-27 22:52:52,569 | INFO     | [data] copytool_in thread has finished
[2025-07-27 18:53:22] 2025-07-27 22:52:52,619 | INFO     | all payload control threads have been joined
[2025-07-27 18:53:22] 2025-07-27 22:52:52,621 | INFO     | [job] control thread has finished
[2025-07-27 18:53:22] 2025-07-27 22:52:52,788 | INFO     | [payload] failed_post thread has finished
[2025-07-27 18:53:22] 2025-07-27 22:52:53,286 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 18:53:22] 2025-07-27 22:52:53,625 | INFO     | [payload] control thread has finished
[2025-07-27 18:53:22] 2025-07-27 22:52:53,757 | INFO     | [data] copytool_out thread has finished
[2025-07-27 18:53:22] 2025-07-27 22:52:55,135 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 18:53:22] 2025-07-27 22:53:01,786 | INFO     | job.realtimelogging is not enabled
[2025-07-27 18:53:22] 2025-07-27 22:53:02,791 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 18:53:22] 2025-07-27 22:53:04,277 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140303566165824)>', '<ExcThread(monitor, started 140303126214400)>']
[2025-07-27 18:53:22] 2025-07-27 22:53:09,300 | INFO     | all workflow threads have been joined
[2025-07-27 18:53:22] 2025-07-27 22:53:09,300 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 18:53:22] 2025-07-27 22:53:09,300 | INFO     | traces error code: 0
[2025-07-27 18:53:22] 2025-07-27 22:53:09,301 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 18:53:22] 2025-07-27 22:53:21,763 | INFO     | PID=6687 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 18:53:22] 2025-07-27 22:53:21,763 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 18:53:22] 2025-07-27 22:53:21,763 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 18:53:22] 2025-07-27 22:53:21,763 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 18:53:22] 2025-07-27 22:53:21,764 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 18:53:22] 2025-07-27 22:53:21,764 | INFO     | [monitor] control thread has ended
[2025-07-27 18:53:22] 2025-07-27 22:53:21,854 [wrapper] ==== pilot stdout END ====
[2025-07-27 18:53:22] 2025-07-27 22:53:21,858 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 18:53:22] 2025-07-27 22:53:21,862 [wrapper] pilotpid: 6687
[2025-07-27 18:53:22] 2025-07-27 22:53:21,865 [wrapper] Pilot exit status: 0
[2025-07-27 18:53:22] 2025-07-27 22:53:21,881 [wrapper] pandaids: 6747525541
[2025-07-27 18:53:22] 2025-07-27 22:53:21,922 [wrapper] cleanup supervisor_pilot  2434 6688
[2025-07-27 18:53:22] 2025-07-27 22:53:21,926 [wrapper] Test setup, not cleaning
[2025-07-27 18:53:22] 2025-07-27 22:53:21,930 [wrapper] apfmon messages muted
[2025-07-27 18:53:22] 2025-07-27 22:53:21,934 [wrapper] ==== wrapper stdout END ====
[2025-07-27 18:53:22] 2025-07-27 22:53:21,938 [wrapper] ==== wrapper stderr END ====
[2025-07-27 18:53:22]  *** Error codes and diagnostics ***
[2025-07-27 18:53:22]     "exeErrorCode": 0,
[2025-07-27 18:53:22]     "exeErrorDiag": "",
[2025-07-27 18:53:22]     "pilotErrorCode": 0,
[2025-07-27 18:53:22]     "pilotErrorDiag": "",
[2025-07-27 18:53:22]  *** Listing of results directory ***
[2025-07-27 18:53:22] total 355988
[2025-07-27 18:53:22] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 12:02 pilot3.tar.gz
[2025-07-27 18:53:22] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 12:04 queuedata.json
[2025-07-27 18:53:22] -rwx------ 1 boincer umatlas     36292 Jul 27 12:06 runpilot2-wrapper.sh
[2025-07-27 18:53:22] -rw-r--r-- 1 boincer umatlas       100 Jul 27 17:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 18:53:22] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 17:31 run_atlas
[2025-07-27 18:53:22] -rw-r--r-- 1 boincer umatlas       105 Jul 27 17:31 job.xml
[2025-07-27 18:53:22] -rw-r--r-- 2 boincer umatlas 145403940 Jul 27 17:31 EVNT.45743347._002842.pool.root.1
[2025-07-27 18:53:22] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 17:31 start_atlas.sh
[2025-07-27 18:53:22] drwxrwx--x 2 boincer umatlas      4096 Jul 27 17:31 shared
[2025-07-27 18:53:22] -rw-r--r-- 2 boincer umatlas    542888 Jul 27 17:31 input.tar.gz
[2025-07-27 18:53:22] -rw-r--r-- 1 boincer umatlas         0 Jul 27 17:31 boinc_lockfile
[2025-07-27 18:53:22] -rw-r--r-- 1 boincer umatlas      2560 Jul 27 17:31 pandaJob.out
[2025-07-27 18:53:22] -rw------- 1 boincer umatlas    980117 Jul 27 17:31 agis_schedconf.cvmfs.json
[2025-07-27 18:53:22] -rw------- 1 boincer umatlas   1593052 Jul 27 17:31 agis_ddmendpoints.agis.ALL.json
[2025-07-27 18:53:22] drwx------ 4 boincer umatlas      4096 Jul 27 17:31 pilot3
[2025-07-27 18:53:22] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 18:49 init_data.xml
[2025-07-27 18:53:22] -rw-r--r-- 1 boincer umatlas       529 Jul 27 18:52 boinc_task_state.xml
[2025-07-27 18:53:22] -rw------- 1 boincer umatlas 213611704 Jul 27 18:52 HITS.45743349._052088.pool.root.1
[2025-07-27 18:53:22] -rw------- 1 boincer umatlas      1048 Jul 27 18:52 memory_monitor_summary.json
[2025-07-27 18:53:22] -rw------- 1 boincer umatlas        95 Jul 27 18:52 pilot_heartbeat.json
[2025-07-27 18:53:22] -rw------- 1 boincer umatlas    352417 Jul 27 18:52 log.45743349._052088.job.log.tgz.1
[2025-07-27 18:53:22] -rw------- 1 boincer umatlas      7854 Jul 27 18:52 heartbeat.json
[2025-07-27 18:53:22] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 18:52 boinc_mmap_file
[2025-07-27 18:53:22] -rw-r--r-- 1 boincer umatlas        27 Jul 27 18:52 wrapper_checkpoint.txt
[2025-07-27 18:53:22] -rw------- 1 boincer umatlas       744 Jul 27 18:53 pilotlog.txt
[2025-07-27 18:53:22] -rw------- 1 boincer umatlas    464430 Jul 27 18:53 log.45743349._052088.job.log.1
[2025-07-27 18:53:22] -rw------- 1 boincer umatlas       357 Jul 27 18:53 output.list
[2025-07-27 18:53:22] -rw-r--r-- 1 boincer umatlas       620 Jul 27 18:53 runtime_log
[2025-07-27 18:53:22] -rw------- 1 boincer umatlas    839680 Jul 27 18:53 result.tar.gz
[2025-07-27 18:53:22] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 18:53 runtime_log.err
[2025-07-27 18:53:22] -rw------- 1 boincer umatlas       659 Jul 27 18:53 F7LMDmc4I07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSmVLDm0mttNo.diag
[2025-07-27 18:53:22] -rw-r--r-- 1 boincer umatlas     21856 Jul 27 18:53 stderr.txt
[2025-07-27 18:53:22] HITS file was successfully produced:
[2025-07-27 18:53:22] -rw------- 1 boincer umatlas 213611704 Jul 27 18:52 shared/HITS.pool.root.1
[2025-07-27 18:53:22]  *** Contents of shared directory: ***
[2025-07-27 18:53:22] total 351980
[2025-07-27 18:53:22] -rw-r--r-- 2 boincer umatlas 145403940 Jul 27 17:31 ATLAS.root_0
[2025-07-27 18:53:22] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 17:31 start_atlas.sh
[2025-07-27 18:53:22] -rw-r--r-- 2 boincer umatlas    542888 Jul 27 17:31 input.tar.gz
[2025-07-27 18:53:22] -rw------- 1 boincer umatlas 213611704 Jul 27 18:52 HITS.pool.root.1
[2025-07-27 18:53:22] -rw------- 1 boincer umatlas    839680 Jul 27 18:53 result.tar.gz
18:53:23 (3085): run_atlas exited; CPU time 52608.614744
18:53:23 (3085): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN