Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:38:05 (1047355): wrapper (7.7.26015): starting
17:38:05 (1047355): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 17:38:05] Arguments: --nthreads 8
[2025-07-27 17:38:05] Threads: 8
[2025-07-27 17:38:05] Checking for CVMFS
[2025-07-27 17:38:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:38:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:38:05] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:38:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:38:06] 2.13.0.0 3724680 19496 234124 148825 1 477 18711819 32935936 18558 16776704 1 91168437 99.571 131448834 19431 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 17:38:06] CVMFS is ok
[2025-07-27 17:38:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:38:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:38:06] Further information can be found at the LHC@home message board.
[2025-07-27 17:38:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:38:06] Checking for apptainer binary...
[2025-07-27 17:38:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:38:06] Running /usr/bin/apptainer --version
[2025-07-27 17:38:06] apptainer version 1.4.1-1.el9
[2025-07-27 17:38:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:38:06] c7-4-31.aglt2.org
[2025-07-27 17:38:06] apptainer works
[2025-07-27 17:38:06] Set ATHENA_PROC_NUMBER=8
[2025-07-27 17:38:06] Set ATHENA_CORE_NUMBER=8
[2025-07-27 17:38:06] Starting ATLAS job with PandaID=6747525675
[2025-07-27 17:38:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:18:10]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:18:10]  replicas=None
[2025-07-27 19:18:10]  scope=mc23_13p6TeV
[2025-07-27 19:18:10]  status=None
[2025-07-27 19:18:10]  status_code=0
[2025-07-27 19:18:10]  storage_token=
[2025-07-27 19:18:10]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6747525675/log.45743349._052222.job.log.tgz.1
[2025-07-27 19:18:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/08/ab/log.45743349._052222.job.log.tgz.1
[2025-07-27 19:18:10]  workdir=None
[2025-07-27 19:18:10] ]
[2025-07-27 19:18:10] 2025-07-27 23:17:27,771 | INFO     | transferring file log.45743349._052222.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6747525675/log.45743349._052222.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 19:18:10] 2025-07-27 23:17:27,771 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6747525675/log.45743349._052222.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._052222.job
[2025-07-27 19:18:10] 2025-07-27 23:17:27,796 | INFO     | adding to output.list: log.45743349._052222.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/08/ab/log.45743349._052222.job.log.tg
[2025-07-27 19:18:10] 2025-07-27 23:17:27,797 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 19:18:10] 2025-07-27 23:17:27,797 | INFO     | summary of transferred files:
[2025-07-27 19:18:10] 2025-07-27 23:17:27,797 | INFO     |  -- lfn=log.45743349._052222.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:18:10] 2025-07-27 23:17:27,798 | INFO     | stage-out finished correctly
[2025-07-27 19:18:10] 2025-07-27 23:17:30,126 | INFO     | monitor loop #409: job 0:6747525675 is in state 'finished'
[2025-07-27 19:18:10] 2025-07-27 23:17:30,126 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:18:10] 2025-07-27 23:17:30,405 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:18:10] 2025-07-27 23:17:31,762 | INFO     | job 6747525675 has state=finished
[2025-07-27 19:18:10] 2025-07-27 23:17:31,763 | INFO     | preparing for final server update for job 6747525675 in state='finished'
[2025-07-27 19:18:10] 2025-07-27 23:17:31,828 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-27 19:18:10] 2025-07-27 23:17:31,829 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:18:10] 2025-07-27 23:17:31,829 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:18:10] 2025-07-27 23:17:31,829 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:18:10] 2025-07-27 23:17:31,829 | INFO     | job 6747525675 has finished - writing final server update
[2025-07-27 19:18:10] 2025-07-27 23:17:31,830 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:18:10] 2025-07-27 23:17:31,832 | INFO     | executing command: lscpu
[2025-07-27 19:18:10] 2025-07-27 23:17:31,908 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:18:10] 2025-07-27 23:17:32,629 | INFO     | monitor loop #410: job 0:6747525675 is in state 'finished'
[2025-07-27 19:18:10] 2025-07-27 23:17:32,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:18:10] 2025-07-27 23:17:35,134 | INFO     | monitor loop #411: job 0:6747525675 is in state 'finished'
[2025-07-27 19:18:10] 2025-07-27 23:17:35,134 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:18:10] 2025-07-27 23:17:36,414 | INFO     | 5954s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-27 19:18:10] 2025-07-27 23:17:37,637 | INFO     | monitor loop #412: job 0:6747525675 is in state 'finished'
[2025-07-27 19:18:10] 2025-07-27 23:17:37,637 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:18:10] 2025-07-27 23:17:38,094 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 19:18:10] 2025-07-27 23:17:38,123 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3022.7646041666685
[2025-07-27 19:18:10] 2025-07-27 23:17:38,139 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747525675/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:18:10] 2025-07-27 23:17:38,140 | INFO     | extracted standard info from prmon json
[2025-07-27 19:18:10] 2025-07-27 23:17:38,140 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:18:10] 2025-07-27 23:17:38,140 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:18:10] 2025-07-27 23:17:38,141 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:18:10] 2025-07-27 23:17:38,141 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:18:10] 2025-07-27 23:17:38,143 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:18:10] 2025-07-27 23:17:38,143 | INFO     | sum of square deviations: 226022842.5
[2025-07-27 19:18:10] 2025-07-27 23:17:38,144 | INFO     | sum of deviations: -13590137692.5
[2025-07-27 19:18:10] 2025-07-27 23:17:38,144 | INFO     | mean x: 1753655366.5
[2025-07-27 19:18:10] 2025-07-27 23:17:38,144 | INFO     | mean y: 2230858.722222222
[2025-07-27 19:18:10] 2025-07-27 23:17:38,144 | INFO     | -- intersect: 105444749996.70073
[2025-07-27 19:18:10] 2025-07-27 23:17:38,144 | INFO     | intersect: 105444749996.70073
[2025-07-27 19:18:10] 2025-07-27 23:17:38,144 | INFO     | chi2: 0.25305648773943085
[2025-07-27 19:18:10] 2025-07-27 23:17:38,144 | INFO     | -- intersect: 105444749996.70073
[2025-07-27 19:18:10] 2025-07-27 23:17:38,144 | INFO     | current memory leak: -60.13 B/s (using 90 data points, chi2=0.25)
[2025-07-27 19:18:10] 2025-07-27 23:17:38,145 | INFO     | could have reported an average CPU frequency of 2991 MHz (7 samples)
[2025-07-27 19:18:10] 2025-07-27 23:17:38,145 | INFO     | ..............................
[2025-07-27 19:18:10] 2025-07-27 23:17:38,145 | INFO     | . Timing measurements:
[2025-07-27 19:18:10] 2025-07-27 23:17:38,145 | INFO     | . get job = 0 s
[2025-07-27 19:18:10] 2025-07-27 23:17:38,145 | INFO     | . initial setup = 3 s
[2025-07-27 19:18:10] 2025-07-27 23:17:38,145 | INFO     | . payload setup = 12 s
[2025-07-27 19:18:10] 2025-07-27 23:17:38,145 | INFO     | . stage-in = 0 s
[2025-07-27 19:18:10] 2025-07-27 23:17:38,145 | INFO     | . payload execution = 5905 s
[2025-07-27 19:18:10] 2025-07-27 23:17:38,145 | INFO     | . stage-out = 0 s
[2025-07-27 19:18:10] 2025-07-27 23:17:38,145 | INFO     | . log creation = 0 s
[2025-07-27 19:18:10] 2025-07-27 23:17:38,145 | INFO     | ..............................
[2025-07-27 19:18:10] 2025-07-27 23:17:38,229 | INFO     | 
[2025-07-27 19:18:10] 2025-07-27 23:17:38,229 | INFO     | job summary report
[2025-07-27 19:18:10] 2025-07-27 23:17:38,229 | INFO     | --------------------------------------------------
[2025-07-27 19:18:10] 2025-07-27 23:17:38,229 | INFO     | PanDA job id: 6747525675
[2025-07-27 19:18:10] 2025-07-27 23:17:38,229 | INFO     | task id: 45743349
[2025-07-27 19:18:10] 2025-07-27 23:17:38,229 | INFO     | errors: (none)
[2025-07-27 19:18:10] 2025-07-27 23:17:38,230 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:18:10] 2025-07-27 23:17:38,230 | INFO     | pilot state: finished 
[2025-07-27 19:18:10] 2025-07-27 23:17:38,230 | INFO     | transexitcode: 0
[2025-07-27 19:18:10] 2025-07-27 23:17:38,230 | INFO     | exeerrorcode: 0
[2025-07-27 19:18:10] 2025-07-27 23:17:38,230 | INFO     | exeerrordiag: 
[2025-07-27 19:18:10] 2025-07-27 23:17:38,230 | INFO     | exitcode: 0
[2025-07-27 19:18:10] 2025-07-27 23:17:38,230 | INFO     | exitmsg: OK
[2025-07-27 19:18:10] 2025-07-27 23:17:38,230 | INFO     | cpuconsumptiontime: 39106 s
[2025-07-27 19:18:10] 2025-07-27 23:17:38,230 | INFO     | nevents: 400
[2025-07-27 19:18:10] 2025-07-27 23:17:38,230 | INFO     | neventsw: 0
[2025-07-27 19:18:10] 2025-07-27 23:17:38,230 | INFO     | pid: 1059648
[2025-07-27 19:18:10] 2025-07-27 23:17:38,230 | INFO     | pgrp: 1059648
[2025-07-27 19:18:10] 2025-07-27 23:17:38,230 | INFO     | corecount: 8
[2025-07-27 19:18:10] 2025-07-27 23:17:38,231 | INFO     | event service: False
[2025-07-27 19:18:10] 2025-07-27 23:17:38,231 | INFO     | sizes: {0: 2397303, 1: 2397502, 10: 2397764, 11: 2397792, 5922: 2424528, 5923: 2433526, 5925: 2433710, 5933: 2433904}
[2025-07-27 19:18:10] 2025-07-27 23:17:38,231 | INFO     | --------------------------------------------------
[2025-07-27 19:18:10] 2025-07-27 23:17:38,231 | INFO     | 
[2025-07-27 19:18:10] 2025-07-27 23:17:38,231 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 19:18:10] 2025-07-27 23:17:38,252 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,252 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,252 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,253 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:18:10] 2025-07-27 23:17:38,253 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,253 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:18:10] 2025-07-27 23:17:38,253 | INFO     | job 6747525675 has completed (purged errors)
[2025-07-27 19:18:10] 2025-07-27 23:17:38,254 | INFO     | overall cleanup function is called
[2025-07-27 19:18:10] 2025-07-27 23:17:39,263 | INFO     | --- collectZombieJob: --- 10, [1059648]
[2025-07-27 19:18:10] 2025-07-27 23:17:39,263 | INFO     | zombie collector waiting for pid 1059648
[2025-07-27 19:18:10] 2025-07-27 23:17:39,264 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:18:10] 2025-07-27 23:17:39,264 | INFO     | collected zombie processes
[2025-07-27 19:18:10] 2025-07-27 23:17:39,264 | INFO     | will attempt to kill all subprocesses of pid=1059648
[2025-07-27 19:18:10] 2025-07-27 23:17:39,689 | INFO     | process IDs to be killed: [1059648] (in reverse order)
[2025-07-27 19:18:10] 2025-07-27 23:17:39,831 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:18:10] 2025-07-27 23:17:39,831 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:18:10] 2025-07-27 23:17:39,848 | INFO     | did not find any defunct processes belonging to 1059648
[2025-07-27 19:18:10] 2025-07-27 23:17:39,865 | INFO     | did not find any defunct processes belonging to 1059648
[2025-07-27 19:18:10] 2025-07-27 23:17:39,865 | INFO     | ready for new job
[2025-07-27 19:18:10] 2025-07-27 23:17:39,865 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:18:10] 2025-07-27 23:17:39,867 | INFO     | ***************************************
[2025-07-27 19:18:10] 2025-07-27 23:17:39,867 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:18:10] 2025-07-27 23:17:39,867 | INFO     | ***************************************
[2025-07-27 19:18:10] 2025-07-27 23:17:39,867 | INFO     | 
[2025-07-27 19:18:10] 2025-07-27 23:17:39,886 | INFO     | architecture information:
[2025-07-27 19:18:10] 2025-07-27 23:17:39,887 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:18:10] 2025-07-27 23:17:39,904 | INFO     | cat /etc/os-release:
[2025-07-27 19:18:10] NAME="CentOS Linux"
[2025-07-27 19:18:10] VERSION="7 (Core)"
[2025-07-27 19:18:10] ID="centos"
[2025-07-27 19:18:10] ID_LIKE="rhel fedora"
[2025-07-27 19:18:10] VERSION_ID="7"
[2025-07-27 19:18:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:18:10] ANSI_COLOR="0;31"
[2025-07-27 19:18:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:18:10] HOME_URL="https://www.centos.org/"
[2025-07-27 19:18:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:18:10] 
[2025-07-27 19:18:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:18:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:18:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:18:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:18:10] 
[2025-07-27 19:18:10] 2025-07-27 23:17:39,904 | INFO     | ***************************************
[2025-07-27 19:18:10] 2025-07-27 23:17:40,406 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 19:18:10] 2025-07-27 23:17:40,429 | INFO     | sufficient remaining disk space (76004982784 B)
[2025-07-27 19:18:10] 2025-07-27 23:17:40,429 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:18:10] 2025-07-27 23:17:40,429 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:18:10] 2025-07-27 23:17:40,430 | INFO     | update_server=False
[2025-07-27 19:18:10] 2025-07-27 23:17:40,430 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:18:10] 2025-07-27 23:17:40,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:18:10] 2025-07-27 23:17:40,984 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:18:10] 2025-07-27 23:17:41,119 | INFO     | all data control threads have been joined
[2025-07-27 19:18:10] 2025-07-27 23:17:41,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:18:10] 2025-07-27 23:17:41,146 | INFO     | aborting loop
[2025-07-27 19:18:10] 2025-07-27 23:17:41,435 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:18:10] 2025-07-27 23:17:41,474 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:18:10] 2025-07-27 23:17:41,644 | INFO     | all payload control threads have been joined
[2025-07-27 19:18:10] 2025-07-27 23:17:41,918 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:18:10] 2025-07-27 23:17:41,950 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:18:10] 2025-07-27 23:17:41,990 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:18:10] 2025-07-27 23:17:42,107 | INFO     | all job control threads have been joined
[2025-07-27 19:18:10] 2025-07-27 23:17:42,124 | INFO     | [data] control thread has finished
[2025-07-27 19:18:10] 2025-07-27 23:17:42,151 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:18:10] 2025-07-27 23:17:42,239 | INFO     | [job] validate thread has finished
[2025-07-27 19:18:10] 2025-07-27 23:17:42,450 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:18:10] 2025-07-27 23:17:42,649 | INFO     | [payload] control thread has finished
[2025-07-27 19:18:10] 2025-07-27 23:17:42,665 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:18:10] 2025-07-27 23:17:42,897 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:18:10] 2025-07-27 23:17:43,112 | INFO     | [job] control thread has finished
[2025-07-27 19:18:10] 2025-07-27 23:17:43,239 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:18:10] 2025-07-27 23:17:44,244 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:18:10] 2025-07-27 23:17:44,991 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:18:10] 2025-07-27 23:17:51,450 | INFO     | job.realtimelogging is not enabled
[2025-07-27 19:18:10] 2025-07-27 23:17:52,455 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:18:10] 2025-07-27 23:17:52,786 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140712225642304)>', '<ExcThread(monitor, started 140711508829952)>']
[2025-07-27 19:18:10] 2025-07-27 23:17:57,812 | INFO     | all workflow threads have been joined
[2025-07-27 19:18:10] 2025-07-27 23:17:57,812 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:18:10] 2025-07-27 23:17:57,812 | INFO     | traces error code: 0
[2025-07-27 19:18:10] 2025-07-27 23:17:57,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:18:10] 2025-07-27 23:18:10,030 | INFO     | PID=1051418 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:18:10] 2025-07-27 23:18:10,030 | INFO     | .. there are 18 such processes running
[2025-07-27 19:18:10] 2025-07-27 23:18:10,031 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:18:10] 2025-07-27 23:18:10,031 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:18:10] 2025-07-27 23:18:10,031 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:18:10] 2025-07-27 23:18:10,031 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:18:10] 2025-07-27 23:18:10,031 | INFO     | [monitor] control thread has ended
[2025-07-27 19:18:10] 2025-07-27 23:18:10,185 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:18:10] 2025-07-27 23:18:10,190 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:18:10] 2025-07-27 23:18:10,201 [wrapper] pilotpid: 1051418
[2025-07-27 19:18:10] 2025-07-27 23:18:10,209 [wrapper] Pilot exit status: 0
[2025-07-27 19:18:10] 2025-07-27 23:18:10,241 [wrapper] pandaids: 6747525675
[2025-07-27 19:18:10] 2025-07-27 23:18:10,362 [wrapper] cleanup supervisor_pilot 1444315 1051419
[2025-07-27 19:18:10] 2025-07-27 23:18:10,370 [wrapper] Test setup, not cleaning
[2025-07-27 19:18:10] 2025-07-27 23:18:10,377 [wrapper] apfmon messages muted
[2025-07-27 19:18:10] 2025-07-27 23:18:10,385 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:18:10] 2025-07-27 23:18:10,390 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:18:10]  *** Error codes and diagnostics ***
[2025-07-27 19:18:10]     "exeErrorCode": 0,
[2025-07-27 19:18:10]     "exeErrorDiag": "",
[2025-07-27 19:18:10]     "pilotErrorCode": 0,
[2025-07-27 19:18:10]     "pilotErrorDiag": "",
[2025-07-27 19:18:10]  *** Listing of results directory ***
[2025-07-27 19:18:10] total 350728
[2025-07-27 19:18:10] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:02 pilot3.tar.gz
[2025-07-27 19:18:10] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 12:09 queuedata.json
[2025-07-27 19:18:10] -rwx------. 1 boincer umatlas     36292 Jul 27 12:11 runpilot2-wrapper.sh
[2025-07-27 19:18:10] -rw-r--r--. 1 boincer umatlas       100 Jul 27 17:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:18:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 17:38 run_atlas
[2025-07-27 19:18:10] -rw-r--r--. 1 boincer umatlas       105 Jul 27 17:38 job.xml
[2025-07-27 19:18:10] -rw-r--r--. 2 boincer umatlas 147389806 Jul 27 17:38 EVNT.45743347._002875.pool.root.1
[2025-07-27 19:18:10] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 17:38 input.tar.gz
[2025-07-27 19:18:10] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:38 start_atlas.sh
[2025-07-27 19:18:10] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 17:38 shared
[2025-07-27 19:18:10] -rw-r--r--. 1 boincer umatlas         0 Jul 27 17:38 boinc_lockfile
[2025-07-27 19:18:10] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 17:38 pandaJob.out
[2025-07-27 19:18:10] -rw-------. 1 boincer umatlas    980117 Jul 27 17:38 agis_schedconf.cvmfs.json
[2025-07-27 19:18:10] -rw-------. 1 boincer umatlas   1593052 Jul 27 17:38 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:18:10] drwx------. 4 boincer umatlas      4096 Jul 27 17:38 pilot3
[2025-07-27 19:18:10] -rw-r--r--. 1 boincer umatlas      6934 Jul 27 19:11 init_data.xml
[2025-07-27 19:18:10] -rw-------. 1 boincer umatlas 206134257 Jul 27 19:16 HITS.45743349._052222.pool.root.1
[2025-07-27 19:18:10] -rw-r--r--. 1 boincer umatlas       530 Jul 27 19:16 boinc_task_state.xml
[2025-07-27 19:18:10] -rw-------. 1 boincer umatlas      1030 Jul 27 19:17 memory_monitor_summary.json
[2025-07-27 19:18:10] -rw-------. 1 boincer umatlas    316917 Jul 27 19:17 log.45743349._052222.job.log.tgz.1
[2025-07-27 19:18:10] -rw-------. 1 boincer umatlas      7769 Jul 27 19:17 heartbeat.json
[2025-07-27 19:18:10] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:18 boinc_mmap_file
[2025-07-27 19:18:10] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:18 wrapper_checkpoint.txt
[2025-07-27 19:18:10] -rw-------. 1 boincer umatlas        95 Jul 27 19:18 pilot_heartbeat.json
[2025-07-27 19:18:10] -rw-------. 1 boincer umatlas       823 Jul 27 19:18 pilotlog.txt
[2025-07-27 19:18:10] -rw-------. 1 boincer umatlas    557456 Jul 27 19:18 log.45743349._052222.job.log.1
[2025-07-27 19:18:10] -rw-------. 1 boincer umatlas       357 Jul 27 19:18 output.list
[2025-07-27 19:18:10] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:18 runtime_log
[2025-07-27 19:18:10] -rw-------. 1 boincer umatlas    890880 Jul 27 19:18 result.tar.gz
[2025-07-27 19:18:10] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 19:18 runtime_log.err
[2025-07-27 19:18:10] -rw-------. 1 boincer umatlas       652 Jul 27 19:18 a1YKDmd9I07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMoVLDmbDof9m.diag
[2025-07-27 19:18:10] -rw-r--r--. 1 boincer umatlas     21903 Jul 27 19:18 stderr.txt
[2025-07-27 19:18:10] HITS file was successfully produced:
[2025-07-27 19:18:10] -rw-------. 1 boincer umatlas 206134257 Jul 27 19:16 shared/HITS.pool.root.1
[2025-07-27 19:18:10]  *** Contents of shared directory: ***
[2025-07-27 19:18:10] total 346664
[2025-07-27 19:18:10] -rw-r--r--. 2 boincer umatlas 147389806 Jul 27 17:38 ATLAS.root_0
[2025-07-27 19:18:10] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 17:38 input.tar.gz
[2025-07-27 19:18:10] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:38 start_atlas.sh
[2025-07-27 19:18:10] -rw-------. 1 boincer umatlas 206134257 Jul 27 19:16 HITS.pool.root.1
[2025-07-27 19:18:10] -rw-------. 1 boincer umatlas    890880 Jul 27 19:18 result.tar.gz
19:18:11 (1047355): run_atlas exited; CPU time 39279.994635
19:18:11 (1047355): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN