Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:25:45 (1966579): wrapper (7.7.26015): starting
17:25:45 (1966579): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 17:25:45] Arguments: --nthreads 8
[2025-07-27 17:25:45] Threads: 8
[2025-07-27 17:25:45] Checking for CVMFS
[2025-07-27 17:25:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:25:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:25:45] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:25:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:25:46] 2.12.6.0 126724 14699 367272 148825 2 364 21835365 32935937 13262 16776704 2 47977173 99.663 74790109 11734 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 17:25:46] CVMFS is ok
[2025-07-27 17:25:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:25:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:25:46] Further information can be found at the LHC@home message board.
[2025-07-27 17:25:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:25:46] Checking for apptainer binary...
[2025-07-27 17:25:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:25:46] Running /usr/bin/apptainer --version
[2025-07-27 17:25:46] apptainer version 1.4.1-1.el9
[2025-07-27 17:25:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:25:46] c6-12-27-3.aglt2.org
[2025-07-27 17:25:46] apptainer works
[2025-07-27 17:25:46] Set ATHENA_PROC_NUMBER=8
[2025-07-27 17:25:46] Set ATHENA_CORE_NUMBER=8
[2025-07-27 17:25:46] Starting ATLAS job with PandaID=6747525125
[2025-07-27 17:25:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:17:45]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:17:45] 2025-07-27 23:17:08,342 | INFO     | maximum number of monitored processes: 6
[2025-07-27 19:17:45] 2025-07-27 23:17:10,845 | INFO     | monitor loop #481: job 0:6747525125 is in state 'finished'
[2025-07-27 19:17:45] 2025-07-27 23:17:10,846 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:17:45] 2025-07-27 23:17:11,566 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 19:17:45] 2025-07-27 23:17:11,589 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2680.7935312499985
[2025-07-27 19:17:45] 2025-07-27 23:17:11,605 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747525125/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:17:45] 2025-07-27 23:17:11,605 | INFO     | extracted standard info from prmon json
[2025-07-27 19:17:45] 2025-07-27 23:17:11,606 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:17:45] 2025-07-27 23:17:11,606 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:17:45] 2025-07-27 23:17:11,606 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:17:45] 2025-07-27 23:17:11,606 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:17:45] 2025-07-27 23:17:11,608 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:17:45] 2025-07-27 23:17:11,609 | INFO     | sum of square deviations: 401533110.0
[2025-07-27 19:17:45] 2025-07-27 23:17:11,609 | INFO     | sum of deviations: -4828284810.000001
[2025-07-27 19:17:45] 2025-07-27 23:17:11,609 | INFO     | mean x: 1753654883.0
[2025-07-27 19:17:45] 2025-07-27 23:17:11,609 | INFO     | mean y: 2229944.908256881
[2025-07-27 19:17:45] 2025-07-27 23:17:11,610 | INFO     | -- intersect: 21089271144.502556
[2025-07-27 19:17:45] 2025-07-27 23:17:11,610 | INFO     | intersect: 21089271144.502556
[2025-07-27 19:17:45] 2025-07-27 23:17:11,610 | INFO     | chi2: 1.8691342709690701
[2025-07-27 19:17:45] 2025-07-27 23:17:11,610 | INFO     | sum of square deviations: 348769330.0
[2025-07-27 19:17:45] 2025-07-27 23:17:11,611 | INFO     | sum of deviations: -4607280620.499999
[2025-07-27 19:17:45] 2025-07-27 23:17:11,611 | INFO     | mean x: 1753654730.5
[2025-07-27 19:17:45] 2025-07-27 23:17:11,611 | INFO     | mean y: 2230571.0673076925
[2025-07-27 19:17:45] 2025-07-27 23:17:11,611 | INFO     | -- intersect: 23168199479.17284
[2025-07-27 19:17:45] 2025-07-27 23:17:11,611 | INFO     | intersect: 23168199479.17284
[2025-07-27 19:17:45] 2025-07-27 23:17:11,611 | INFO     | chi2: 1.864888300870447
[2025-07-27 19:17:45] 2025-07-27 23:17:11,611 | INFO     | current chi2=1.864888300870447 (change=0.22716239087637505 %)
[2025-07-27 19:17:45] 2025-07-27 23:17:11,611 | INFO     | right removable region: 103
[2025-07-27 19:17:45] 2025-07-27 23:17:11,612 | INFO     | sum of square deviations: 348769330.0
[2025-07-27 19:17:45] 2025-07-27 23:17:11,612 | INFO     | sum of deviations: -20557224663.0
[2025-07-27 19:17:45] 2025-07-27 23:17:11,612 | INFO     | mean x: 1753655035.5
[2025-07-27 19:17:45] 2025-07-27 23:17:11,612 | INFO     | mean y: 2274630.173076923
[2025-07-27 19:17:45] 2025-07-27 23:17:11,612 | INFO     | -- intersect: 103366525569.82635
[2025-07-27 19:17:45] 2025-07-27 23:17:11,612 | INFO     | intersect: 103366525569.82635
[2025-07-27 19:17:45] 2025-07-27 23:17:11,613 | INFO     | chi2: 0.2751915129191197
[2025-07-27 19:17:45] 2025-07-27 23:17:11,613 | INFO     | current chi2=0.2751915129191197 (change=85.27706023086057 %)
[2025-07-27 19:17:45] 2025-07-27 23:17:11,613 | INFO     | sum of square deviations: 300842850.0
[2025-07-27 19:17:45] 2025-07-27 23:17:11,613 | INFO     | sum of deviations: -17743172785.0
[2025-07-27 19:17:45] 2025-07-27 23:17:11,614 | INFO     | mean x: 1753655188.0
[2025-07-27 19:17:45] 2025-07-27 23:17:11,614 | INFO     | mean y: 2265623.202020202
[2025-07-27 19:17:45] 2025-07-27 23:17:11,614 | INFO     | -- intersect: 103429709572.74466
[2025-07-27 19:17:45] 2025-07-27 23:17:11,614 | INFO     | intersect: 103429709572.74466
[2025-07-27 19:17:45] 2025-07-27 23:17:11,614 | INFO     | chi2: 0.27383774541555456
[2025-07-27 19:17:45] 2025-07-27 23:17:11,614 | INFO     | current chi2=0.27383774541555456 (change=0.4919365024033352 %)
[2025-07-27 19:17:45] 2025-07-27 23:17:11,614 | INFO     | left removable region: 20
[2025-07-27 19:17:45] 2025-07-27 23:17:11,614 | INFO     | sum of square deviations: 177275882.0
[2025-07-27 19:17:45] 2025-07-27 23:17:11,615 | INFO     | sum of deviations: -10421080240.999998
[2025-07-27 19:17:45] 2025-07-27 23:17:11,615 | INFO     | mean x: 1753655310.0
[2025-07-27 19:17:45] 2025-07-27 23:17:11,615 | INFO     | mean y: 2241104.795180723
[2025-07-27 19:17:45] 2025-07-27 23:17:11,615 | INFO     | -- intersect: 103090052567.86676
[2025-07-27 19:17:45] 2025-07-27 23:17:11,615 | INFO     | intersect: 103090052567.86676
[2025-07-27 19:17:45] 2025-07-27 23:17:11,615 | INFO     | chi2: 0.23865124821786332
[2025-07-27 19:17:45] 2025-07-27 23:17:11,615 | INFO     | -- intersect: 103090052567.86676
[2025-07-27 19:17:45] 2025-07-27 23:17:11,616 | INFO     | current memory leak: -58.78 B/s (using 83 data points, chi2=0.24)
[2025-07-27 19:17:45] 2025-07-27 23:17:11,616 | INFO     | could have reported an average CPU frequency of 2613 MHz (7 samples)
[2025-07-27 19:17:45] 2025-07-27 23:17:11,616 | INFO     | ..............................
[2025-07-27 19:17:45] 2025-07-27 23:17:11,616 | INFO     | . Timing measurements:
[2025-07-27 19:17:45] 2025-07-27 23:17:11,616 | INFO     | . get job = 0 s
[2025-07-27 19:17:45] 2025-07-27 23:17:11,616 | INFO     | . initial setup = 2 s
[2025-07-27 19:17:45] 2025-07-27 23:17:11,617 | INFO     | . payload setup = 8 s
[2025-07-27 19:17:45] 2025-07-27 23:17:11,617 | INFO     | . stage-in = 0 s
[2025-07-27 19:17:45] 2025-07-27 23:17:11,617 | INFO     | . payload execution = 6635 s
[2025-07-27 19:17:45] 2025-07-27 23:17:11,617 | INFO     | . stage-out = 1 s
[2025-07-27 19:17:45] 2025-07-27 23:17:11,617 | INFO     | . log creation = 0 s
[2025-07-27 19:17:45] 2025-07-27 23:17:11,617 | INFO     | ..............................
[2025-07-27 19:17:45] 2025-07-27 23:17:11,707 | INFO     | 
[2025-07-27 19:17:45] 2025-07-27 23:17:11,708 | INFO     | job summary report
[2025-07-27 19:17:45] 2025-07-27 23:17:11,708 | INFO     | --------------------------------------------------
[2025-07-27 19:17:45] 2025-07-27 23:17:11,708 | INFO     | PanDA job id: 6747525125
[2025-07-27 19:17:45] 2025-07-27 23:17:11,708 | INFO     | task id: 45743349
[2025-07-27 19:17:45] 2025-07-27 23:17:11,708 | INFO     | errors: (none)
[2025-07-27 19:17:45] 2025-07-27 23:17:11,708 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:17:45] 2025-07-27 23:17:11,708 | INFO     | pilot state: finished 
[2025-07-27 19:17:45] 2025-07-27 23:17:11,708 | INFO     | transexitcode: 0
[2025-07-27 19:17:45] 2025-07-27 23:17:11,708 | INFO     | exeerrorcode: 0
[2025-07-27 19:17:45] 2025-07-27 23:17:11,708 | INFO     | exeerrordiag: 
[2025-07-27 19:17:45] 2025-07-27 23:17:11,708 | INFO     | exitcode: 0
[2025-07-27 19:17:45] 2025-07-27 23:17:11,708 | INFO     | exitmsg: OK
[2025-07-27 19:17:45] 2025-07-27 23:17:11,708 | INFO     | cpuconsumptiontime: 50178 s
[2025-07-27 19:17:45] 2025-07-27 23:17:11,708 | INFO     | nevents: 400
[2025-07-27 19:17:45] 2025-07-27 23:17:11,708 | INFO     | neventsw: 0
[2025-07-27 19:17:45] 2025-07-27 23:17:11,709 | INFO     | pid: 1977699
[2025-07-27 19:17:45] 2025-07-27 23:17:11,709 | INFO     | pgrp: 1977699
[2025-07-27 19:17:45] 2025-07-27 23:17:11,709 | INFO     | corecount: 8
[2025-07-27 19:17:45] 2025-07-27 23:17:11,709 | INFO     | event service: False
[2025-07-27 19:17:45] 2025-07-27 23:17:11,709 | INFO     | sizes: {0: 2397475, 5: 2397737, 11: 2397793, 6648: 2424793, 6649: 2424792, 6650: 2434030, 6657: 2434168}
[2025-07-27 19:17:45] 2025-07-27 23:17:11,709 | INFO     | --------------------------------------------------
[2025-07-27 19:17:45] 2025-07-27 23:17:11,709 | INFO     | 
[2025-07-27 19:17:45] 2025-07-27 23:17:11,709 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 19:17:45] 2025-07-27 23:17:11,734 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,734 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,734 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,735 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,735 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,735 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,735 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,735 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,735 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,735 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,735 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,735 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,735 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,735 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,735 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,735 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,736 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,736 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:17:45] 2025-07-27 23:17:11,736 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,736 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:17:45] 2025-07-27 23:17:11,736 | INFO     | job 6747525125 has completed (purged errors)
[2025-07-27 19:17:45] 2025-07-27 23:17:11,736 | INFO     | overall cleanup function is called
[2025-07-27 19:17:45] 2025-07-27 23:17:12,744 | INFO     | --- collectZombieJob: --- 10, [1977699]
[2025-07-27 19:17:45] 2025-07-27 23:17:12,744 | INFO     | zombie collector waiting for pid 1977699
[2025-07-27 19:17:45] 2025-07-27 23:17:12,744 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:17:45] 2025-07-27 23:17:12,744 | INFO     | collected zombie processes
[2025-07-27 19:17:45] 2025-07-27 23:17:12,744 | INFO     | will attempt to kill all subprocesses of pid=1977699
[2025-07-27 19:17:45] 2025-07-27 23:17:13,120 | INFO     | process IDs to be killed: [1977699] (in reverse order)
[2025-07-27 19:17:45] 2025-07-27 23:17:13,253 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:17:45] 2025-07-27 23:17:13,253 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:17:45] 2025-07-27 23:17:13,271 | INFO     | did not find any defunct processes belonging to 1977699
[2025-07-27 19:17:45] 2025-07-27 23:17:13,291 | INFO     | did not find any defunct processes belonging to 1977699
[2025-07-27 19:17:45] 2025-07-27 23:17:13,291 | INFO     | ready for new job
[2025-07-27 19:17:45] 2025-07-27 23:17:13,292 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:17:45] 2025-07-27 23:17:13,294 | INFO     | ***************************************
[2025-07-27 19:17:45] 2025-07-27 23:17:13,294 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:17:45] 2025-07-27 23:17:13,294 | INFO     | ***************************************
[2025-07-27 19:17:45] 2025-07-27 23:17:13,294 | INFO     | 
[2025-07-27 19:17:45] 2025-07-27 23:17:13,313 | INFO     | architecture information:
[2025-07-27 19:17:45] 2025-07-27 23:17:13,313 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:17:45] 2025-07-27 23:17:13,335 | INFO     | cat /etc/os-release:
[2025-07-27 19:17:45] NAME="CentOS Linux"
[2025-07-27 19:17:45] VERSION="7 (Core)"
[2025-07-27 19:17:45] ID="centos"
[2025-07-27 19:17:45] ID_LIKE="rhel fedora"
[2025-07-27 19:17:45] VERSION_ID="7"
[2025-07-27 19:17:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:17:45] ANSI_COLOR="0;31"
[2025-07-27 19:17:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:17:45] HOME_URL="https://www.centos.org/"
[2025-07-27 19:17:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:17:45] 
[2025-07-27 19:17:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:17:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:17:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:17:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:17:45] 
[2025-07-27 19:17:45] 2025-07-27 23:17:13,335 | INFO     | ***************************************
[2025-07-27 19:17:45] 2025-07-27 23:17:13,838 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 19:17:45] 2025-07-27 23:17:13,859 | INFO     | sufficient remaining disk space (95948898304 B)
[2025-07-27 19:17:45] 2025-07-27 23:17:13,860 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:17:45] 2025-07-27 23:17:13,860 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:17:45] 2025-07-27 23:17:13,860 | INFO     | update_server=False
[2025-07-27 19:17:45] 2025-07-27 23:17:13,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:17:45] 2025-07-27 23:17:14,353 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:17:45] 2025-07-27 23:17:14,355 | INFO     | aborting loop
[2025-07-27 19:17:45] 2025-07-27 23:17:14,500 | INFO     | all job control threads have been joined
[2025-07-27 19:17:45] 2025-07-27 23:17:14,656 | INFO     | all data control threads have been joined
[2025-07-27 19:17:45] 2025-07-27 23:17:14,849 | INFO     | all payload control threads have been joined
[2025-07-27 19:17:45] 2025-07-27 23:17:14,865 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:17:45] 2025-07-27 23:17:15,076 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:17:45] 2025-07-27 23:17:15,288 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:17:45] 2025-07-27 23:17:15,289 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:17:45] 2025-07-27 23:17:15,295 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:17:45] 2025-07-27 23:17:15,360 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:17:45] 2025-07-27 23:17:15,408 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:17:45] 2025-07-27 23:17:15,506 | INFO     | [job] control thread has finished
[2025-07-27 19:17:45] 2025-07-27 23:17:15,661 | INFO     | [data] control thread has finished
[2025-07-27 19:17:45] 2025-07-27 23:17:15,855 | INFO     | [payload] control thread has finished
[2025-07-27 19:17:45] 2025-07-27 23:17:15,918 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:17:45] 2025-07-27 23:17:16,016 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:17:45] 2025-07-27 23:17:16,276 | INFO     | [job] validate thread has finished
[2025-07-27 19:17:45] 2025-07-27 23:17:16,286 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:17:45] 2025-07-27 23:17:16,718 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:17:45] 2025-07-27 23:17:17,293 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:17:45] 2025-07-27 23:17:17,723 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:17:45] 2025-07-27 23:17:19,415 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:17:45] 2025-07-27 23:17:24,773 | INFO     | job.realtimelogging is not enabled
[2025-07-27 19:17:45] 2025-07-27 23:17:25,781 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:17:45] 2025-07-27 23:17:26,798 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140134716716864)>', '<ExcThread(monitor, started 140134221596416)>']
[2025-07-27 19:17:45] 2025-07-27 23:17:31,823 | INFO     | all workflow threads have been joined
[2025-07-27 19:17:45] 2025-07-27 23:17:31,823 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:17:45] 2025-07-27 23:17:31,824 | INFO     | traces error code: 0
[2025-07-27 19:17:45] 2025-07-27 23:17:31,825 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:17:45] 2025-07-27 23:17:44,567 | INFO     | PID=1970188 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:17:45] 2025-07-27 23:17:44,569 | INFO     | .. there are 23 such processes running
[2025-07-27 19:17:45] 2025-07-27 23:17:44,571 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:17:45] 2025-07-27 23:17:44,572 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:17:45] 2025-07-27 23:17:44,572 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:17:45] 2025-07-27 23:17:44,572 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:17:45] 2025-07-27 23:17:44,572 | INFO     | [monitor] control thread has ended
[2025-07-27 19:17:45] 2025-07-27 23:17:44,864 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:17:45] 2025-07-27 23:17:44,869 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:17:45] 2025-07-27 23:17:44,873 [wrapper] pilotpid: 1970188
[2025-07-27 19:17:45] 2025-07-27 23:17:44,877 [wrapper] Pilot exit status: 0
[2025-07-27 19:17:45] 2025-07-27 23:17:44,894 [wrapper] pandaids: 6747525125
[2025-07-27 19:17:45] 2025-07-27 23:17:44,991 [wrapper] cleanup supervisor_pilot 2303663 1970189
[2025-07-27 19:17:45] 2025-07-27 23:17:44,995 [wrapper] Test setup, not cleaning
[2025-07-27 19:17:45] 2025-07-27 23:17:45,000 [wrapper] apfmon messages muted
[2025-07-27 19:17:45] 2025-07-27 23:17:45,005 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:17:45] 2025-07-27 23:17:45,010 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:17:45]  *** Error codes and diagnostics ***
[2025-07-27 19:17:45]     "exeErrorCode": 0,
[2025-07-27 19:17:45]     "exeErrorDiag": "",
[2025-07-27 19:17:45]     "pilotErrorCode": 0,
[2025-07-27 19:17:45]     "pilotErrorDiag": "",
[2025-07-27 19:17:45]  *** Listing of results directory ***
[2025-07-27 19:17:45] total 435252
[2025-07-27 19:17:45] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:02 pilot3.tar.gz
[2025-07-27 19:17:45] -rwx------. 1 boincer umatlas     36292 Jul 27 12:04 runpilot2-wrapper.sh
[2025-07-27 19:17:45] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 12:04 queuedata.json
[2025-07-27 19:17:45] -rw-r--r--. 1 boincer umatlas       100 Jul 27 17:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:17:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 17:25 run_atlas
[2025-07-27 19:17:45] -rw-r--r--. 1 boincer umatlas       105 Jul 27 17:25 job.xml
[2025-07-27 19:17:45] -rw-r--r--. 2 boincer umatlas 228883159 Jul 27 17:25 EVNT.45743347._002839.pool.root.1
[2025-07-27 19:17:45] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:25 start_atlas.sh
[2025-07-27 19:17:45] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 17:25 shared
[2025-07-27 19:17:45] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 17:25 input.tar.gz
[2025-07-27 19:17:45] -rw-r--r--. 1 boincer umatlas         0 Jul 27 17:25 boinc_lockfile
[2025-07-27 19:17:45] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 17:25 pandaJob.out
[2025-07-27 19:17:45] -rw-------. 1 boincer umatlas    980117 Jul 27 17:25 agis_schedconf.cvmfs.json
[2025-07-27 19:17:45] -rw-------. 1 boincer umatlas   1593052 Jul 27 17:25 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:17:45] drwx------. 4 boincer umatlas      4096 Jul 27 17:25 pilot3
[2025-07-27 19:17:45] -rw-r--r--. 1 boincer umatlas      6856 Jul 27 19:12 init_data.xml
[2025-07-27 19:17:45] -rw-------. 1 boincer umatlas 211036532 Jul 27 19:16 HITS.45743349._052038.pool.root.1
[2025-07-27 19:17:45] -rw-r--r--. 1 boincer umatlas       529 Jul 27 19:16 boinc_task_state.xml
[2025-07-27 19:17:45] -rw-------. 1 boincer umatlas      1038 Jul 27 19:16 memory_monitor_summary.json
[2025-07-27 19:17:45] -rw-------. 1 boincer umatlas    323506 Jul 27 19:17 log.45743349._052038.job.log.tgz.1
[2025-07-27 19:17:45] -rw-------. 1 boincer umatlas      7825 Jul 27 19:17 heartbeat.json
[2025-07-27 19:17:45] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:17 boinc_mmap_file
[2025-07-27 19:17:45] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:17 wrapper_checkpoint.txt
[2025-07-27 19:17:45] -rw-------. 1 boincer umatlas        95 Jul 27 19:17 pilot_heartbeat.json
[2025-07-27 19:17:45] -rw-------. 1 boincer umatlas       823 Jul 27 19:17 pilotlog.txt
[2025-07-27 19:17:45] -rw-------. 1 boincer umatlas    628026 Jul 27 19:17 log.45743349._052038.job.log.1
[2025-07-27 19:17:45] -rw-------. 1 boincer umatlas       357 Jul 27 19:17 output.list
[2025-07-27 19:17:45] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:17 runtime_log
[2025-07-27 19:17:45] -rw-------. 1 boincer umatlas    972800 Jul 27 19:17 result.tar.gz
[2025-07-27 19:17:45] -rw-------. 1 boincer umatlas       654 Jul 27 19:17 183KDmf2I07n9Rq4apOajLDm4fhM0noT9bVof3QYDmMm2KDmBH4Z2n.diag
[2025-07-27 19:17:45] -rw-r--r--. 1 boincer umatlas      8670 Jul 27 19:17 runtime_log.err
[2025-07-27 19:17:45] -rw-r--r--. 1 boincer umatlas     21106 Jul 27 19:17 stderr.txt
[2025-07-27 19:17:45] HITS file was successfully produced:
[2025-07-27 19:17:45] -rw-------. 1 boincer umatlas 211036532 Jul 27 19:16 shared/HITS.pool.root.1
[2025-07-27 19:17:45]  *** Contents of shared directory: ***
[2025-07-27 19:17:45] total 431116
[2025-07-27 19:17:45] -rw-r--r--. 2 boincer umatlas 228883159 Jul 27 17:25 ATLAS.root_0
[2025-07-27 19:17:45] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:25 start_atlas.sh
[2025-07-27 19:17:45] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 17:25 input.tar.gz
[2025-07-27 19:17:45] -rw-------. 1 boincer umatlas 211036532 Jul 27 19:16 HITS.pool.root.1
[2025-07-27 19:17:45] -rw-------. 1 boincer umatlas    972800 Jul 27 19:17 result.tar.gz
19:17:46 (1966579): run_atlas exited; CPU time 50487.321380
19:17:46 (1966579): called boinc_finish(0)

</stderr_txt>
]]>

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