Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:17:17 (1743): wrapper (7.7.26015): starting
12:17:17 (1743): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 12:17:17] Arguments: --nthreads 8
[2025-07-28 12:17:17] Threads: 8
[2025-07-28 12:17:17] Checking for CVMFS
[2025-07-28 12:17:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 12:17:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 12:17:18] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 12:17:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 12:17:18] 2.11.2.0 28846 111003 137968 148845 1 109 21259242 25165824 4353 130560 0 85651782 99.881 48624785 5183 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-28 12:17:18] CVMFS is ok
[2025-07-28 12:17:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 12:17:18] Checking for apptainer binary...
[2025-07-28 12:17:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 12:17:18] Running /usr/bin/apptainer --version
[2025-07-28 12:17:18] apptainer version 1.3.2-1.el7
[2025-07-28 12:17:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 12:17:20] cg-vwn318.simple-grid.lan
[2025-07-28 12:17:20] apptainer works
[2025-07-28 12:17:20] Set ATHENA_PROC_NUMBER=8
[2025-07-28 12:17:20] Set ATHENA_CORE_NUMBER=8
[2025-07-28 12:17:20] Starting ATLAS job with PandaID=6744948972
[2025-07-28 12:17:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 16:48:03]  *** The last 200 lines of the pilot log: ***
[2025-07-28 16:48:03] 2025-07-28 14:47:31,421 | INFO     | fitting pss+swap vs Time
[2025-07-28 16:48:03] 2025-07-28 14:47:31,422 | INFO     | sum of square deviations: 5770452380.0
[2025-07-28 16:48:03] 2025-07-28 14:47:31,424 | INFO     | sum of deviations: -69761924771.0
[2025-07-28 16:48:03] 2025-07-28 14:47:31,424 | INFO     | mean x: 1753705966.0
[2025-07-28 16:48:03] 2025-07-28 14:47:31,424 | INFO     | mean y: 2541658.196226415
[2025-07-28 16:48:03] 2025-07-28 14:47:31,424 | INFO     | -- intersect: 21203982310.332047
[2025-07-28 16:48:03] 2025-07-28 14:47:31,425 | INFO     | intersect: 21203982310.332047
[2025-07-28 16:48:03] 2025-07-28 14:47:31,425 | INFO     | chi2: 2.7274483472815065
[2025-07-28 16:48:03] 2025-07-28 14:47:31,426 | INFO     | sum of square deviations: 5449944045.0
[2025-07-28 16:48:03] 2025-07-28 14:47:31,428 | INFO     | sum of deviations: -50309691531.50001
[2025-07-28 16:48:03] 2025-07-28 14:47:31,428 | INFO     | mean x: 1753705813.5
[2025-07-28 16:48:03] 2025-07-28 14:47:31,428 | INFO     | mean y: 2550786.1346153845
[2025-07-28 16:48:03] 2025-07-28 14:47:31,429 | INFO     | -- intersect: 16191413971.82688
[2025-07-28 16:48:03] 2025-07-28 14:47:31,429 | INFO     | intersect: 16191413971.82688
[2025-07-28 16:48:03] 2025-07-28 14:47:31,429 | INFO     | chi2: 1.961869765288155
[2025-07-28 16:48:03] 2025-07-28 14:47:31,429 | INFO     | current chi2=1.961869765288155 (change=28.069407171593795 %)
[2025-07-28 16:48:03] 2025-07-28 14:47:31,430 | INFO     | sum of square deviations: 5141528960.0
[2025-07-28 16:48:03] 2025-07-28 14:47:31,432 | INFO     | sum of deviations: -48684152399.0
[2025-07-28 16:48:03] 2025-07-28 14:47:31,432 | INFO     | mean x: 1753705661.0
[2025-07-28 16:48:03] 2025-07-28 14:47:31,433 | INFO     | mean y: 2551590.0
[2025-07-28 16:48:03] 2025-07-28 14:47:31,433 | INFO     | -- intersect: 16608054413.641205
[2025-07-28 16:48:03] 2025-07-28 14:47:31,433 | INFO     | intersect: 16608054413.641205
[2025-07-28 16:48:03] 2025-07-28 14:47:31,433 | INFO     | chi2: 1.9593991623057225
[2025-07-28 16:48:03] 2025-07-28 14:47:31,434 | INFO     | current chi2=1.9593991623057225 (change=0.12593103916199683 %)
[2025-07-28 16:48:03] 2025-07-28 14:47:31,434 | INFO     | right removable region: 254
[2025-07-28 16:48:03] 2025-07-28 14:47:31,434 | INFO     | sum of square deviations: 5449944045.0
[2025-07-28 16:48:03] 2025-07-28 14:47:31,437 | INFO     | sum of deviations: -117087665089.5
[2025-07-28 16:48:03] 2025-07-28 14:47:31,437 | INFO     | mean x: 1753706118.5
[2025-07-28 16:48:03] 2025-07-28 14:47:31,437 | INFO     | mean y: 2564022.8346153847
[2025-07-28 16:48:03] 2025-07-28 14:47:31,437 | INFO     | -- intersect: 37679529689.43074
[2025-07-28 16:48:03] 2025-07-28 14:47:31,437 | INFO     | intersect: 37679529689.43074
[2025-07-28 16:48:03] 2025-07-28 14:47:31,438 | INFO     | chi2: 1.0676350958728604
[2025-07-28 16:48:03] 2025-07-28 14:47:31,438 | INFO     | current chi2=1.0676350958728604 (change=60.855900463266686 %)
[2025-07-28 16:48:03] 2025-07-28 14:47:31,438 | INFO     | sum of square deviations: 5141528960.0
[2025-07-28 16:48:03] 2025-07-28 14:47:31,441 | INFO     | sum of deviations: -116384729972.99997
[2025-07-28 16:48:03] 2025-07-28 14:47:31,441 | INFO     | mean x: 1753706271.0
[2025-07-28 16:48:03] 2025-07-28 14:47:31,441 | INFO     | mean y: 2563649.1764705884
[2025-07-28 16:48:03] 2025-07-28 14:47:31,441 | INFO     | -- intersect: 39699827321.166306
[2025-07-28 16:48:03] 2025-07-28 14:47:31,441 | INFO     | intersect: 39699827321.166306
[2025-07-28 16:48:03] 2025-07-28 14:47:31,442 | INFO     | chi2: 1.04279689299044
[2025-07-28 16:48:03] 2025-07-28 14:47:31,442 | INFO     | current chi2=1.04279689299044 (change=2.32646931319858 %)
[2025-07-28 16:48:03] 2025-07-28 14:47:31,442 | INFO     | left removable region: 20
[2025-07-28 16:48:03] 2025-07-28 14:47:31,443 | INFO     | sum of square deviations: 3972995422.5
[2025-07-28 16:48:03] 2025-07-28 14:47:31,445 | INFO     | sum of deviations: -81603606806.00002
[2025-07-28 16:48:03] 2025-07-28 14:47:31,445 | INFO     | mean x: 1753706240.5
[2025-07-28 16:48:03] 2025-07-28 14:47:31,445 | INFO     | mean y: 2568084.2735042735
[2025-07-28 16:48:03] 2025-07-28 14:47:31,445 | INFO     | -- intersect: 36022935410.279526
[2025-07-28 16:48:03] 2025-07-28 14:47:31,445 | INFO     | intersect: 36022935410.279526
[2025-07-28 16:48:03] 2025-07-28 14:47:31,446 | INFO     | chi2: 0.24518091103658884
[2025-07-28 16:48:03] 2025-07-28 14:47:31,446 | INFO     | -- intersect: 36022935410.279526
[2025-07-28 16:48:03] 2025-07-28 14:47:31,446 | INFO     | current memory leak: -20.54 B/s (using 234 data points, chi2=0.25)
[2025-07-28 16:48:03] 2025-07-28 14:47:31,447 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-28 16:48:03] 2025-07-28 14:47:31,447 | INFO     | ..............................
[2025-07-28 16:48:03] 2025-07-28 14:47:31,447 | INFO     | . Timing measurements:
[2025-07-28 16:48:03] 2025-07-28 14:47:31,448 | INFO     | . get job = 0 s
[2025-07-28 16:48:03] 2025-07-28 14:47:31,448 | INFO     | . initial setup = 2 s
[2025-07-28 16:48:03] 2025-07-28 14:47:31,448 | INFO     | . payload setup = 12 s
[2025-07-28 16:48:03] 2025-07-28 14:47:31,448 | INFO     | . stage-in = 0 s
[2025-07-28 16:48:03] 2025-07-28 14:47:31,448 | INFO     | . payload execution = 16141 s
[2025-07-28 16:48:03] 2025-07-28 14:47:31,448 | INFO     | . stage-out = 1 s
[2025-07-28 16:48:03] 2025-07-28 14:47:31,448 | INFO     | . log creation = 0 s
[2025-07-28 16:48:03] 2025-07-28 14:47:31,448 | INFO     | ..............................
[2025-07-28 16:48:03] 2025-07-28 14:47:31,572 | INFO     | 
[2025-07-28 16:48:03] 2025-07-28 14:47:31,572 | INFO     | job summary report
[2025-07-28 16:48:03] 2025-07-28 14:47:31,572 | INFO     | --------------------------------------------------
[2025-07-28 16:48:03] 2025-07-28 14:47:31,573 | INFO     | PanDA job id: 6744948972
[2025-07-28 16:48:03] 2025-07-28 14:47:31,573 | INFO     | task id: 45743349
[2025-07-28 16:48:03] 2025-07-28 14:47:31,573 | INFO     | errors: (none)
[2025-07-28 16:48:03] 2025-07-28 14:47:31,573 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 16:48:03] 2025-07-28 14:47:31,573 | INFO     | pilot state: finished 
[2025-07-28 16:48:03] 2025-07-28 14:47:31,573 | INFO     | transexitcode: 0
[2025-07-28 16:48:03] 2025-07-28 14:47:31,573 | INFO     | exeerrorcode: 0
[2025-07-28 16:48:03] 2025-07-28 14:47:31,573 | INFO     | exeerrordiag: 
[2025-07-28 16:48:03] 2025-07-28 14:47:31,573 | INFO     | exitcode: 0
[2025-07-28 16:48:03] 2025-07-28 14:47:31,573 | INFO     | exitmsg: OK
[2025-07-28 16:48:03] 2025-07-28 14:47:31,573 | INFO     | cpuconsumptiontime: 61482 s
[2025-07-28 16:48:03] 2025-07-28 14:47:31,573 | INFO     | nevents: 400
[2025-07-28 16:48:03] 2025-07-28 14:47:31,574 | INFO     | neventsw: 0
[2025-07-28 16:48:03] 2025-07-28 14:47:31,574 | INFO     | pid: 12392
[2025-07-28 16:48:03] 2025-07-28 14:47:31,574 | INFO     | pgrp: 12392
[2025-07-28 16:48:03] 2025-07-28 14:47:31,574 | INFO     | corecount: 8
[2025-07-28 16:48:03] 2025-07-28 14:47:31,574 | INFO     | event service: False
[2025-07-28 16:48:03] 2025-07-28 14:47:31,574 | INFO     | sizes: {0: 2397300, 1: 2397499, 8: 2397761, 12: 2397789, 16158: 2428787, 16161: 2432405, 16172: 2432543}
[2025-07-28 16:48:03] 2025-07-28 14:47:31,574 | INFO     | --------------------------------------------------
[2025-07-28 16:48:03] 2025-07-28 14:47:31,574 | INFO     | 
[2025-07-28 16:48:03] 2025-07-28 14:47:31,574 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-07-28 16:48:03] 2025-07-28 14:47:31,601 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,601 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,601 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,601 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,601 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,602 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,602 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,602 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,602 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,602 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,602 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,602 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,602 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,602 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,602 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,602 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,603 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,603 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 16:48:03] 2025-07-28 14:47:31,603 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,603 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 16:48:03] 2025-07-28 14:47:31,603 | INFO     | job 6744948972 has completed (purged errors)
[2025-07-28 16:48:03] 2025-07-28 14:47:31,603 | INFO     | overall cleanup function is called
[2025-07-28 16:48:03] 2025-07-28 14:47:32,611 | INFO     | --- collectZombieJob: --- 10, [12392]
[2025-07-28 16:48:03] 2025-07-28 14:47:32,612 | INFO     | zombie collector waiting for pid 12392
[2025-07-28 16:48:03] 2025-07-28 14:47:32,612 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 16:48:03] 2025-07-28 14:47:32,612 | INFO     | collected zombie processes
[2025-07-28 16:48:03] 2025-07-28 14:47:32,612 | INFO     | will attempt to kill all subprocesses of pid=12392
[2025-07-28 16:48:03] 2025-07-28 14:47:32,705 | INFO     | process IDs to be killed: [12392] (in reverse order)
[2025-07-28 16:48:03] 2025-07-28 14:47:32,768 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 16:48:03] 2025-07-28 14:47:32,769 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 16:48:03] 2025-07-28 14:47:32,772 | INFO     | did not find any defunct processes belonging to 12392
[2025-07-28 16:48:03] 2025-07-28 14:47:32,774 | INFO     | did not find any defunct processes belonging to 12392
[2025-07-28 16:48:03] 2025-07-28 14:47:32,775 | INFO     | ready for new job
[2025-07-28 16:48:03] 2025-07-28 14:47:32,775 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 16:48:03] 2025-07-28 14:47:32,777 | INFO     | ***************************************
[2025-07-28 16:48:03] 2025-07-28 14:47:32,777 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 16:48:03] 2025-07-28 14:47:32,777 | INFO     | ***************************************
[2025-07-28 16:48:03] 2025-07-28 14:47:32,777 | INFO     | 
[2025-07-28 16:48:03] 2025-07-28 14:47:32,778 | INFO     | pilot is running in a VM
[2025-07-28 16:48:03] 2025-07-28 14:47:32,778 | INFO     | architecture information:
[2025-07-28 16:48:03] 2025-07-28 14:47:32,778 | INFO     | executing command: cat /etc/os-release
[2025-07-28 16:48:03] 2025-07-28 14:47:32,797 | INFO     | cat /etc/os-release:
[2025-07-28 16:48:03] NAME="CentOS Linux"
[2025-07-28 16:48:03] VERSION="7 (Core)"
[2025-07-28 16:48:03] ID="centos"
[2025-07-28 16:48:03] ID_LIKE="rhel fedora"
[2025-07-28 16:48:03] VERSION_ID="7"
[2025-07-28 16:48:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 16:48:03] ANSI_COLOR="0;31"
[2025-07-28 16:48:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 16:48:03] HOME_URL="https://www.centos.org/"
[2025-07-28 16:48:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 16:48:03] 
[2025-07-28 16:48:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 16:48:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 16:48:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 16:48:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 16:48:03] 
[2025-07-28 16:48:03] 2025-07-28 14:47:32,797 | INFO     | ***************************************
[2025-07-28 16:48:03] 2025-07-28 14:47:33,300 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-07-28 16:48:03] 2025-07-28 14:47:33,340 | INFO     | sufficient remaining disk space (497684578304 B)
[2025-07-28 16:48:03] 2025-07-28 14:47:33,341 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 16:48:03] 2025-07-28 14:47:33,341 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 16:48:03] 2025-07-28 14:47:33,341 | INFO     | update_server=False
[2025-07-28 16:48:03] 2025-07-28 14:47:33,341 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 16:48:03] 2025-07-28 14:47:33,342 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 16:48:03] 2025-07-28 14:47:33,343 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 16:48:03] 2025-07-28 14:47:33,343 | INFO     | aborting loop
[2025-07-28 16:48:03] 2025-07-28 14:47:33,390 | INFO     | all data control threads have been joined
[2025-07-28 16:48:03] 2025-07-28 14:47:33,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 16:48:03] 2025-07-28 14:47:34,170 | INFO     | all payload control threads have been joined
[2025-07-28 16:48:03] 2025-07-28 14:47:34,272 | INFO     | all job control threads have been joined
[2025-07-28 16:48:03] 2025-07-28 14:47:34,347 | INFO     | [job] retrieve thread has finished
[2025-07-28 16:48:03] 2025-07-28 14:47:34,348 | INFO     | [job] job monitor thread has finished
[2025-07-28 16:48:03] 2025-07-28 14:47:34,348 | INFO     | [job] queue monitor thread has finished
[2025-07-28 16:48:03] 2025-07-28 14:47:34,394 | INFO     | [data] control thread has finished
[2025-07-28 16:48:03] 2025-07-28 14:47:34,459 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 16:48:03] 2025-07-28 14:47:34,967 | INFO     | [job] validate thread has finished
[2025-07-28 16:48:03] 2025-07-28 14:47:34,971 | INFO     | [payload] validate_post thread has finished
[2025-07-28 16:48:03] 2025-07-28 14:47:35,177 | INFO     | [payload] control thread has finished
[2025-07-28 16:48:03] 2025-07-28 14:47:35,277 | INFO     | [job] control thread has finished
[2025-07-28 16:48:03] 2025-07-28 14:47:35,366 | INFO     | [payload] failed_post thread has finished
[2025-07-28 16:48:03] 2025-07-28 14:47:35,446 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 16:48:03] 2025-07-28 14:47:35,447 | INFO     | [data] copytool_in thread has finished
[2025-07-28 16:48:03] 2025-07-28 14:47:35,447 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 16:48:03] 2025-07-28 14:47:35,750 | INFO     | [data] copytool_out thread has finished
[2025-07-28 16:48:03] 2025-07-28 14:47:35,840 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 16:48:03] 2025-07-28 14:47:39,844 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 16:48:03] 2025-07-28 14:47:43,934 | INFO     | job.realtimelogging is not enabled
[2025-07-28 16:48:03] 2025-07-28 14:47:44,940 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 16:48:03] 2025-07-28 14:47:45,831 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139810480760640)>', '<ExcThread(monitor, started 139809884456704)>']
[2025-07-28 16:48:03] 2025-07-28 14:47:50,849 | INFO     | all workflow threads have been joined
[2025-07-28 16:48:03] 2025-07-28 14:47:50,850 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 16:48:03] 2025-07-28 14:47:50,850 | INFO     | traces error code: 0
[2025-07-28 16:48:03] 2025-07-28 14:47:50,850 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 16:48:03] 2025-07-28 14:47:53,068 [wrapper] supervise_pilot (15 min periods counter: 19)
[2025-07-28 16:48:03] 2025-07-28 14:48:02,893 | INFO     | PID=5819 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-28 16:48:03] 2025-07-28 14:48:02,893 | INFO     | .. there are 7 such processes running
[2025-07-28 16:48:03] 2025-07-28 14:48:02,894 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 16:48:03] 2025-07-28 14:48:02,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 16:48:03] 2025-07-28 14:48:02,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 16:48:03] 2025-07-28 14:48:02,894 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 16:48:03] 2025-07-28 14:48:02,894 | CRITICAL | thread 'MainThread' is not alive
[2025-07-28 16:48:03] 2025-07-28 14:48:02,894 | INFO     | [monitor] control thread has ended
[2025-07-28 16:48:03] 2025-07-28 14:48:03,091 [wrapper] ==== pilot stdout END ====
[2025-07-28 16:48:03] 2025-07-28 14:48:03,094 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 16:48:03] 2025-07-28 14:48:03,097 [wrapper] pilotpid: 5819
[2025-07-28 16:48:03] 2025-07-28 14:48:03,100 [wrapper] Pilot exit status: 0
[2025-07-28 16:48:03] 2025-07-28 14:48:03,123 [wrapper] pandaids: 6744948972
[2025-07-28 16:48:03] 2025-07-28 14:48:03,154 [wrapper] cleanup supervisor_pilot 17886 5820
[2025-07-28 16:48:03] 2025-07-28 14:48:03,158 [wrapper] Test setup, not cleaning
[2025-07-28 16:48:03] 2025-07-28 14:48:03,164 [wrapper] apfmon messages muted
[2025-07-28 16:48:03] 2025-07-28 14:48:03,167 [wrapper] ==== wrapper stdout END ====
[2025-07-28 16:48:03] 2025-07-28 14:48:03,170 [wrapper] ==== wrapper stderr END ====
[2025-07-28 16:48:03]  *** Error codes and diagnostics ***
[2025-07-28 16:48:03]     "exeErrorCode": 0,
[2025-07-28 16:48:03]     "exeErrorDiag": "",
[2025-07-28 16:48:03]     "pilotErrorCode": 0,
[2025-07-28 16:48:03]     "pilotErrorDiag": "",
[2025-07-28 16:48:03]  *** Listing of results directory ***
[2025-07-28 16:48:03] total 350436
[2025-07-28 16:48:03] -rw-r--r--. 1 boinc boinc    530466 Jul 25 04:32 pilot3.tar.gz
[2025-07-28 16:48:03] -rw-r--r--. 1 boinc boinc      5112 Jul 25 04:44 queuedata.json
[2025-07-28 16:48:03] -rwx------. 1 boinc boinc     36292 Jul 25 04:45 runpilot2-wrapper.sh
[2025-07-28 16:48:03] -rw-r--r--. 1 boinc boinc       100 Jul 28 12:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 16:48:03] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 12:17 run_atlas
[2025-07-28 16:48:03] -rw-r--r--. 1 boinc boinc       105 Jul 28 12:17 job.xml
[2025-07-28 16:48:03] -rw-r--r--. 2 boinc boinc 145648616 Jul 28 12:17 EVNT.45743347._000825.pool.root.1
[2025-07-28 16:48:03] -rw-r--r--. 1 boinc boinc      6392 Jul 28 12:17 init_data.xml
[2025-07-28 16:48:03] -rw-r--r--. 2 boinc boinc     15095 Jul 28 12:17 start_atlas.sh
[2025-07-28 16:48:03] drwxrwx--x. 2 boinc boinc        68 Jul 28 12:17 shared
[2025-07-28 16:48:03] -rw-r--r--. 2 boinc boinc    542885 Jul 28 12:17 input.tar.gz
[2025-07-28 16:48:03] -rw-r--r--. 1 boinc boinc         0 Jul 28 12:17 boinc_lockfile
[2025-07-28 16:48:03] -rw-r--r--. 1 boinc boinc      2560 Jul 28 12:17 pandaJob.out
[2025-07-28 16:48:03] -rw-------. 1 boinc boinc    978460 Jul 28 12:17 agis_schedconf.cvmfs.json
[2025-07-28 16:48:03] drwx------. 4 boinc boinc      4096 Jul 28 12:17 pilot3
[2025-07-28 16:48:03] -rw-------. 1 boinc boinc 205778798 Jul 28 16:46 HITS.45743349._014869.pool.root.1
[2025-07-28 16:48:03] -rw-r--r--. 1 boinc boinc       530 Jul 28 16:47 boinc_task_state.xml
[2025-07-28 16:48:03] -rw-------. 1 boinc boinc      1019 Jul 28 16:47 memory_monitor_summary.json
[2025-07-28 16:48:03] -rw-------. 1 boinc boinc        95 Jul 28 16:47 pilot_heartbeat.json
[2025-07-28 16:48:03] -rw-------. 1 boinc boinc   1589827 Jul 28 16:47 agis_ddmendpoints.agis.ALL.json
[2025-07-28 16:48:03] -rw-------. 1 boinc boinc    393023 Jul 28 16:47 log.45743349._014869.job.log.tgz.1
[2025-07-28 16:48:03] -rw-------. 1 boinc boinc      7781 Jul 28 16:47 heartbeat.json
[2025-07-28 16:48:03] -rw-r--r--. 1 boinc boinc        28 Jul 28 16:47 wrapper_checkpoint.txt
[2025-07-28 16:48:03] -rw-r--r--. 1 boinc boinc      8192 Jul 28 16:47 boinc_mmap_file
[2025-07-28 16:48:03] -rw-------. 1 boinc boinc       889 Jul 28 16:48 pilotlog.txt
[2025-07-28 16:48:03] -rw-------. 1 boinc boinc   1388041 Jul 28 16:48 log.45743349._014869.job.log.1
[2025-07-28 16:48:03] -rw-------. 1 boinc boinc       357 Jul 28 16:48 output.list
[2025-07-28 16:48:03] -rw-r--r--. 1 boinc boinc       620 Jul 28 16:48 runtime_log
[2025-07-28 16:48:03] -rw-------. 1 boinc boinc   1802240 Jul 28 16:48 result.tar.gz
[2025-07-28 16:48:03] -rw-r--r--. 1 boinc boinc      8674 Jul 28 16:48 runtime_log.err
[2025-07-28 16:48:03] -rw-------. 1 boinc boinc       657 Jul 28 16:48 6BgMDmobNz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmKLyKDmrhZIhn.diag
[2025-07-28 16:48:03] -rw-r--r--. 1 boinc boinc     20532 Jul 28 16:48 stderr.txt
[2025-07-28 16:48:03] HITS file was successfully produced:
[2025-07-28 16:48:03] -rw-------. 1 boinc boinc 205778798 Jul 28 16:46 shared/HITS.pool.root.1
[2025-07-28 16:48:03]  *** Contents of shared directory: ***
[2025-07-28 16:48:03] total 345500
[2025-07-28 16:48:03] -rw-r--r--. 2 boinc boinc 145648616 Jul 28 12:17 ATLAS.root_0
[2025-07-28 16:48:03] -rw-r--r--. 2 boinc boinc     15095 Jul 28 12:17 start_atlas.sh
[2025-07-28 16:48:03] -rw-r--r--. 2 boinc boinc    542885 Jul 28 12:17 input.tar.gz
[2025-07-28 16:48:03] -rw-------. 1 boinc boinc 205778798 Jul 28 16:46 HITS.pool.root.1
[2025-07-28 16:48:03] -rw-------. 1 boinc boinc   1802240 Jul 28 16:48 result.tar.gz
16:48:05 (1743): run_atlas exited; CPU time 61689.560439
16:48:05 (1743): called boinc_finish(0)

</stderr_txt>
]]>

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