Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:06:15 (8978): wrapper (7.7.26015): starting
19:06:15 (8978): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 19:06:15] Arguments: --nthreads 8
[2025-07-28 19:06:15] Threads: 8
[2025-07-28 19:06:15] Checking for CVMFS
[2025-07-28 19:06:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 19:06:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 19:06:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 19:06:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 19:06:17] 2.11.2.0 16797 111280 139508 148856 1 109 24551449 25165824 4353 130560 0 66165727 99.844 52791201 3677 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-28 19:06:17] CVMFS is ok
[2025-07-28 19:06:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 19:06:17] Checking for apptainer binary...
[2025-07-28 19:06:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 19:06:17] Running /usr/bin/apptainer --version
[2025-07-28 19:06:17] apptainer version 1.3.2-1.el7
[2025-07-28 19:06:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 19:06:18] cg-vwn223.simple-grid.lan
[2025-07-28 19:06:18] apptainer works
[2025-07-28 19:06:18] Set ATHENA_PROC_NUMBER=8
[2025-07-28 19:06:18] Set ATHENA_CORE_NUMBER=8
[2025-07-28 19:06:18] Starting ATLAS job with PandaID=6747525588
[2025-07-28 19:06:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 22:52:38]  *** The last 200 lines of the pilot log: ***
[2025-07-28 22:52:38] 2025-07-28 20:52:07,018 | INFO     | chi2: 1.4345311500020832
[2025-07-28 22:52:38] 2025-07-28 20:52:07,018 | INFO     | current chi2=1.4345311500020832 (change=-0.03573819075509124 %)
[2025-07-28 22:52:38] 2025-07-28 20:52:07,018 | INFO     | right removable region: 215
[2025-07-28 22:52:38] 2025-07-28 20:52:07,019 | INFO     | sum of square deviations: 3124858590.0
[2025-07-28 22:52:38] 2025-07-28 20:52:07,020 | INFO     | sum of deviations: 9724283524.0
[2025-07-28 22:52:38] 2025-07-28 20:52:07,020 | INFO     | mean x: 1753729313.5
[2025-07-28 22:52:38] 2025-07-28 20:52:07,020 | INFO     | mean y: 2510530.092592593
[2025-07-28 22:52:38] 2025-07-28 20:52:07,020 | INFO     | -- intersect: -5454939968.115034
[2025-07-28 22:52:38] 2025-07-28 20:52:07,020 | INFO     | intersect: -5454939968.115034
[2025-07-28 22:52:38] 2025-07-28 20:52:07,021 | INFO     | chi2: 0.027121207453022166
[2025-07-28 22:52:38] 2025-07-28 20:52:07,021 | INFO     | current chi2=0.027121207453022166 (change=98.10872701636089 %)
[2025-07-28 22:52:38] 2025-07-28 20:52:07,021 | INFO     | sum of square deviations: 2912836010.0
[2025-07-28 22:52:38] 2025-07-28 20:52:07,023 | INFO     | sum of deviations: 12317282138.000002
[2025-07-28 22:52:38] 2025-07-28 20:52:07,023 | INFO     | mean x: 1753729466.0
[2025-07-28 22:52:38] 2025-07-28 20:52:07,023 | INFO     | mean y: 2508663.9052132703
[2025-07-28 22:52:38] 2025-07-28 20:52:07,023 | INFO     | -- intersect: -7413350159.690586
[2025-07-28 22:52:38] 2025-07-28 20:52:07,023 | INFO     | intersect: -7413350159.690586
[2025-07-28 22:52:38] 2025-07-28 20:52:07,023 | INFO     | chi2: 0.0023024708016561664
[2025-07-28 22:52:38] 2025-07-28 20:52:07,023 | INFO     | current chi2=0.0023024708016561664 (change=91.51044139297862 %)
[2025-07-28 22:52:38] 2025-07-28 20:52:07,024 | INFO     | sum of square deviations: 2710627567.5
[2025-07-28 22:52:38] 2025-07-28 20:52:07,025 | INFO     | sum of deviations: 10245107135.999996
[2025-07-28 22:52:38] 2025-07-28 20:52:07,025 | INFO     | mean x: 1753729618.5
[2025-07-28 22:52:38] 2025-07-28 20:52:07,025 | INFO     | mean y: 2510225.0291262134
[2025-07-28 22:52:38] 2025-07-28 20:52:07,025 | INFO     | -- intersect: -6625898651.399413
[2025-07-28 22:52:38] 2025-07-28 20:52:07,025 | INFO     | intersect: -6625898651.399413
[2025-07-28 22:52:38] 2025-07-28 20:52:07,026 | INFO     | chi2: 0.0010048822209328028
[2025-07-28 22:52:38] 2025-07-28 20:52:07,026 | INFO     | current chi2=0.0010048822209328028 (change=56.356353348325136 %)
[2025-07-28 22:52:38] 2025-07-28 20:52:07,026 | INFO     | sum of square deviations: 2518000700.0
[2025-07-28 22:52:38] 2025-07-28 20:52:07,027 | INFO     | sum of deviations: 8813925990.000004
[2025-07-28 22:52:38] 2025-07-28 20:52:07,028 | INFO     | mean x: 1753729771.0
[2025-07-28 22:52:38] 2025-07-28 20:52:07,028 | INFO     | mean y: 2511355.4825870646
[2025-07-28 22:52:38] 2025-07-28 20:52:07,028 | INFO     | -- intersect: -6136186067.458421
[2025-07-28 22:52:38] 2025-07-28 20:52:07,028 | INFO     | intersect: -6136186067.458421
[2025-07-28 22:52:38] 2025-07-28 20:52:07,028 | INFO     | chi2: 0.0005017813239886394
[2025-07-28 22:52:38] 2025-07-28 20:52:07,028 | INFO     | current chi2=0.0005017813239886394 (change=50.06565809047249 %)
[2025-07-28 22:52:38] 2025-07-28 20:52:07,029 | INFO     | sum of square deviations: 2334722845.0
[2025-07-28 22:52:38] 2025-07-28 20:52:07,030 | INFO     | sum of deviations: 7867577358.0
[2025-07-28 22:52:38] 2025-07-28 20:52:07,030 | INFO     | mean x: 1753729923.5
[2025-07-28 22:52:38] 2025-07-28 20:52:07,030 | INFO     | mean y: 2512141.2040816327
[2025-07-28 22:52:38] 2025-07-28 20:52:07,030 | INFO     | -- intersect: -5907228223.792292
[2025-07-28 22:52:38] 2025-07-28 20:52:07,030 | INFO     | intersect: -5907228223.792292
[2025-07-28 22:52:38] 2025-07-28 20:52:07,031 | INFO     | chi2: 0.00039431584031870075
[2025-07-28 22:52:38] 2025-07-28 20:52:07,031 | INFO     | current chi2=0.00039431584031870075 (change=21.416796228225447 %)
[2025-07-28 22:52:38] 2025-07-28 20:52:07,031 | INFO     | left removable region: 50
[2025-07-28 22:52:38] 2025-07-28 20:52:07,031 | INFO     | sum of square deviations: 1392881930.0
[2025-07-28 22:52:38] 2025-07-28 20:52:07,032 | INFO     | sum of deviations: 4564729063.999999
[2025-07-28 22:52:38] 2025-07-28 20:52:07,032 | INFO     | mean x: 1753730503.0
[2025-07-28 22:52:38] 2025-07-28 20:52:07,033 | INFO     | mean y: 2514585.690909091
[2025-07-28 22:52:38] 2025-07-28 20:52:07,033 | INFO     | -- intersect: -5744781308.561547
[2025-07-28 22:52:38] 2025-07-28 20:52:07,033 | INFO     | intersect: -5744781308.561547
[2025-07-28 22:52:38] 2025-07-28 20:52:07,033 | INFO     | chi2: 0.0003421380170216065
[2025-07-28 22:52:38] 2025-07-28 20:52:07,033 | INFO     | -- intersect: -5744781308.561547
[2025-07-28 22:52:38] 2025-07-28 20:52:07,033 | INFO     | current memory leak: 3.28 B/s (using 165 data points, chi2=0.00)
[2025-07-28 22:52:38] 2025-07-28 20:52:07,034 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-07-28 22:52:38] 2025-07-28 20:52:07,034 | INFO     | ..............................
[2025-07-28 22:52:38] 2025-07-28 20:52:07,034 | INFO     | . Timing measurements:
[2025-07-28 22:52:38] 2025-07-28 20:52:07,034 | INFO     | . get job = 0 s
[2025-07-28 22:52:38] 2025-07-28 20:52:07,034 | INFO     | . initial setup = 2 s
[2025-07-28 22:52:38] 2025-07-28 20:52:07,034 | INFO     | . payload setup = 13 s
[2025-07-28 22:52:38] 2025-07-28 20:52:07,035 | INFO     | . stage-in = 0 s
[2025-07-28 22:52:38] 2025-07-28 20:52:07,035 | INFO     | . payload execution = 13480 s
[2025-07-28 22:52:38] 2025-07-28 20:52:07,035 | INFO     | . stage-out = 1 s
[2025-07-28 22:52:38] 2025-07-28 20:52:07,035 | INFO     | . log creation = 0 s
[2025-07-28 22:52:38] 2025-07-28 20:52:07,035 | INFO     | ..............................
[2025-07-28 22:52:38] 2025-07-28 20:52:07,111 | INFO     | 
[2025-07-28 22:52:38] 2025-07-28 20:52:07,111 | INFO     | job summary report
[2025-07-28 22:52:38] 2025-07-28 20:52:07,111 | INFO     | --------------------------------------------------
[2025-07-28 22:52:38] 2025-07-28 20:52:07,111 | INFO     | PanDA job id: 6747525588
[2025-07-28 22:52:38] 2025-07-28 20:52:07,111 | INFO     | task id: 45743349
[2025-07-28 22:52:38] 2025-07-28 20:52:07,111 | INFO     | errors: (none)
[2025-07-28 22:52:38] 2025-07-28 20:52:07,111 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 22:52:38] 2025-07-28 20:52:07,111 | INFO     | pilot state: finished 
[2025-07-28 22:52:38] 2025-07-28 20:52:07,111 | INFO     | transexitcode: 0
[2025-07-28 22:52:38] 2025-07-28 20:52:07,111 | INFO     | exeerrorcode: 0
[2025-07-28 22:52:38] 2025-07-28 20:52:07,111 | INFO     | exeerrordiag: 
[2025-07-28 22:52:38] 2025-07-28 20:52:07,112 | INFO     | exitcode: 0
[2025-07-28 22:52:38] 2025-07-28 20:52:07,112 | INFO     | exitmsg: OK
[2025-07-28 22:52:38] 2025-07-28 20:52:07,112 | INFO     | cpuconsumptiontime: 51183 s
[2025-07-28 22:52:38] 2025-07-28 20:52:07,112 | INFO     | nevents: 400
[2025-07-28 22:52:38] 2025-07-28 20:52:07,112 | INFO     | neventsw: 0
[2025-07-28 22:52:38] 2025-07-28 20:52:07,112 | INFO     | pid: 19604
[2025-07-28 22:52:38] 2025-07-28 20:52:07,112 | INFO     | pgrp: 19604
[2025-07-28 22:52:38] 2025-07-28 20:52:07,112 | INFO     | corecount: 8
[2025-07-28 22:52:38] 2025-07-28 20:52:07,112 | INFO     | event service: False
[2025-07-28 22:52:38] 2025-07-28 20:52:07,112 | INFO     | sizes: {0: 2391680, 1: 2391935, 2: 2391935, 11: 2392225, 12: 2392253, 13497: 2422385, 13499: 2431383, 13503: 2431439, 13509: 2431633}
[2025-07-28 22:52:38] 2025-07-28 20:52:07,112 | INFO     | --------------------------------------------------
[2025-07-28 22:52:38] 2025-07-28 20:52:07,112 | INFO     | 
[2025-07-28 22:52:38] 2025-07-28 20:52:07,112 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-07-28 22:52:38] 2025-07-28 20:52:07,131 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,131 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,131 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,131 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,131 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,131 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,131 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,131 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,131 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,131 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,131 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,131 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,131 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,132 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,132 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,132 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,132 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,132 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 22:52:38] 2025-07-28 20:52:07,132 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,132 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 22:52:38] 2025-07-28 20:52:07,132 | INFO     | job 6747525588 has completed (purged errors)
[2025-07-28 22:52:38] 2025-07-28 20:52:07,132 | INFO     | overall cleanup function is called
[2025-07-28 22:52:38] 2025-07-28 20:52:08,140 | INFO     | --- collectZombieJob: --- 10, [19604]
[2025-07-28 22:52:38] 2025-07-28 20:52:08,140 | INFO     | zombie collector waiting for pid 19604
[2025-07-28 22:52:38] 2025-07-28 20:52:08,140 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 22:52:38] 2025-07-28 20:52:08,140 | INFO     | collected zombie processes
[2025-07-28 22:52:38] 2025-07-28 20:52:08,140 | INFO     | will attempt to kill all subprocesses of pid=19604
[2025-07-28 22:52:38] 2025-07-28 20:52:08,207 | INFO     | process IDs to be killed: [19604] (in reverse order)
[2025-07-28 22:52:38] 2025-07-28 20:52:08,259 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 22:52:38] 2025-07-28 20:52:08,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 22:52:38] 2025-07-28 20:52:08,262 | INFO     | did not find any defunct processes belonging to 19604
[2025-07-28 22:52:38] 2025-07-28 20:52:08,264 | INFO     | did not find any defunct processes belonging to 19604
[2025-07-28 22:52:38] 2025-07-28 20:52:08,264 | INFO     | ready for new job
[2025-07-28 22:52:38] 2025-07-28 20:52:08,264 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 22:52:38] 2025-07-28 20:52:08,266 | INFO     | ***************************************
[2025-07-28 22:52:38] 2025-07-28 20:52:08,266 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 22:52:38] 2025-07-28 20:52:08,267 | INFO     | ***************************************
[2025-07-28 22:52:38] 2025-07-28 20:52:08,267 | INFO     | 
[2025-07-28 22:52:38] 2025-07-28 20:52:08,267 | INFO     | pilot is running in a VM
[2025-07-28 22:52:38] 2025-07-28 20:52:08,267 | INFO     | architecture information:
[2025-07-28 22:52:38] 2025-07-28 20:52:08,268 | INFO     | executing command: cat /etc/os-release
[2025-07-28 22:52:38] 2025-07-28 20:52:08,287 | INFO     | cat /etc/os-release:
[2025-07-28 22:52:38] NAME="CentOS Linux"
[2025-07-28 22:52:38] VERSION="7 (Core)"
[2025-07-28 22:52:38] ID="centos"
[2025-07-28 22:52:38] ID_LIKE="rhel fedora"
[2025-07-28 22:52:38] VERSION_ID="7"
[2025-07-28 22:52:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 22:52:38] ANSI_COLOR="0;31"
[2025-07-28 22:52:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 22:52:38] HOME_URL="https://www.centos.org/"
[2025-07-28 22:52:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 22:52:38] 
[2025-07-28 22:52:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 22:52:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 22:52:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 22:52:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 22:52:38] 
[2025-07-28 22:52:38] 2025-07-28 20:52:08,288 | INFO     | ***************************************
[2025-07-28 22:52:38] 2025-07-28 20:52:08,791 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-07-28 22:52:38] 2025-07-28 20:52:08,809 | INFO     | sufficient remaining disk space (497297653760 B)
[2025-07-28 22:52:38] 2025-07-28 20:52:08,810 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 22:52:38] 2025-07-28 20:52:08,810 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 22:52:38] 2025-07-28 20:52:08,810 | INFO     | update_server=False
[2025-07-28 22:52:38] 2025-07-28 20:52:08,810 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 22:52:38] 2025-07-28 20:52:08,810 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 22:52:38] 2025-07-28 20:52:08,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 22:52:38] 2025-07-28 20:52:09,240 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 22:52:38] 2025-07-28 20:52:09,240 | INFO     | aborting loop
[2025-07-28 22:52:38] 2025-07-28 20:52:09,689 | INFO     | all data control threads have been joined
[2025-07-28 22:52:38] 2025-07-28 20:52:09,743 | INFO     | all payload control threads have been joined
[2025-07-28 22:52:38] 2025-07-28 20:52:09,745 | INFO     | all job control threads have been joined
[2025-07-28 22:52:38] 2025-07-28 20:52:09,813 | INFO     | [job] retrieve thread has finished
[2025-07-28 22:52:38] 2025-07-28 20:52:09,816 | INFO     | [job] queue monitor thread has finished
[2025-07-28 22:52:38] 2025-07-28 20:52:09,961 | INFO     | [data] copytool_in thread has finished
[2025-07-28 22:52:38] 2025-07-28 20:52:10,051 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 22:52:38] 2025-07-28 20:52:10,134 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 22:52:38] 2025-07-28 20:52:10,246 | INFO     | [job] job monitor thread has finished
[2025-07-28 22:52:38] 2025-07-28 20:52:10,535 | INFO     | [payload] validate_post thread has finished
[2025-07-28 22:52:38] 2025-07-28 20:52:10,693 | INFO     | [data] control thread has finished
[2025-07-28 22:52:38] 2025-07-28 20:52:10,735 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 22:52:38] 2025-07-28 20:52:10,748 | INFO     | [payload] control thread has finished
[2025-07-28 22:52:38] 2025-07-28 20:52:10,750 | INFO     | [job] control thread has finished
[2025-07-28 22:52:38] 2025-07-28 20:52:10,791 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 22:52:38] 2025-07-28 20:52:10,811 | INFO     | [data] copytool_out thread has finished
[2025-07-28 22:52:38] 2025-07-28 20:52:10,923 | INFO     | [payload] failed_post thread has finished
[2025-07-28 22:52:38] 2025-07-28 20:52:11,221 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 22:52:38] 2025-07-28 20:52:11,228 | INFO     | [job] validate thread has finished
[2025-07-28 22:52:38] 2025-07-28 20:52:15,223 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 22:52:38] 2025-07-28 20:52:16,995 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140070869514048)>', '<ExcThread(monitor, started 140070149416704)>']
[2025-07-28 22:52:38] 2025-07-28 20:52:22,020 | INFO     | all workflow threads have been joined
[2025-07-28 22:52:38] 2025-07-28 20:52:22,021 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 22:52:38] 2025-07-28 20:52:22,021 | INFO     | traces error code: 0
[2025-07-28 22:52:38] 2025-07-28 20:52:22,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 22:52:38] 2025-07-28 20:52:38,499 | INFO     | PID=13006 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-28 22:52:38] 2025-07-28 20:52:38,499 | INFO     | .. there are 6 such processes running
[2025-07-28 22:52:38] 2025-07-28 20:52:38,500 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 22:52:38] 2025-07-28 20:52:38,500 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 22:52:38] 2025-07-28 20:52:38,500 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 22:52:38] 2025-07-28 20:52:38,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 22:52:38] 2025-07-28 20:52:38,501 | CRITICAL | thread 'MainThread' is not alive
[2025-07-28 22:52:38] 2025-07-28 20:52:38,501 | INFO     | [monitor] control thread has ended
[2025-07-28 22:52:38] 2025-07-28 20:52:38,688 [wrapper] ==== pilot stdout END ====
[2025-07-28 22:52:38] 2025-07-28 20:52:38,692 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 22:52:38] 2025-07-28 20:52:38,696 [wrapper] pilotpid: 13006
[2025-07-28 22:52:38] 2025-07-28 20:52:38,699 [wrapper] Pilot exit status: 0
[2025-07-28 22:52:38] 2025-07-28 20:52:38,714 [wrapper] pandaids: 6747525588
[2025-07-28 22:52:38] 2025-07-28 20:52:38,748 [wrapper] cleanup supervisor_pilot 28723 13007
[2025-07-28 22:52:38] 2025-07-28 20:52:38,752 [wrapper] Test setup, not cleaning
[2025-07-28 22:52:38] 2025-07-28 20:52:38,755 [wrapper] apfmon messages muted
[2025-07-28 22:52:38] 2025-07-28 20:52:38,758 [wrapper] ==== wrapper stdout END ====
[2025-07-28 22:52:38] 2025-07-28 20:52:38,761 [wrapper] ==== wrapper stderr END ====
[2025-07-28 22:52:38]  *** Error codes and diagnostics ***
[2025-07-28 22:52:38]     "exeErrorCode": 0,
[2025-07-28 22:52:38]     "exeErrorDiag": "",
[2025-07-28 22:52:38]     "pilotErrorCode": 0,
[2025-07-28 22:52:38]     "pilotErrorDiag": "",
[2025-07-28 22:52:38]  *** Listing of results directory ***
[2025-07-28 22:52:38] total 360344
[2025-07-28 22:52:38] -rw-r--r--. 1 boinc boinc    530466 Jul 27 18:02 pilot3.tar.gz
[2025-07-28 22:52:38] -rw-r--r--. 1 boinc boinc      5112 Jul 27 18:09 queuedata.json
[2025-07-28 22:52:38] -rwx------. 1 boinc boinc     36292 Jul 27 18:10 runpilot2-wrapper.sh
[2025-07-28 22:52:38] -rw-r--r--. 1 boinc boinc       100 Jul 28 19:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 22:52:38] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 19:06 run_atlas
[2025-07-28 22:52:38] -rw-r--r--. 1 boinc boinc       105 Jul 28 19:06 job.xml
[2025-07-28 22:52:38] -rw-r--r--. 1 boinc boinc      6392 Jul 28 19:06 init_data.xml
[2025-07-28 22:52:38] -rw-r--r--. 2 boinc boinc 148337557 Jul 28 19:06 EVNT.45743347._002870.pool.root.1
[2025-07-28 22:52:38] -rw-r--r--. 2 boinc boinc     15095 Jul 28 19:06 start_atlas.sh
[2025-07-28 22:52:38] drwxrwx--x. 2 boinc boinc        68 Jul 28 19:06 shared
[2025-07-28 22:52:38] -rw-r--r--. 2 boinc boinc    542890 Jul 28 19:06 input.tar.gz
[2025-07-28 22:52:38] -rw-r--r--. 1 boinc boinc         0 Jul 28 19:06 boinc_lockfile
[2025-07-28 22:52:38] -rw-r--r--. 1 boinc boinc      2562 Jul 28 19:06 pandaJob.out
[2025-07-28 22:52:38] -rw-------. 1 boinc boinc    977348 Jul 28 19:06 agis_schedconf.cvmfs.json
[2025-07-28 22:52:38] drwx------. 4 boinc boinc      4096 Jul 28 19:06 pilot3
[2025-07-28 22:52:38] -rw-------. 1 boinc boinc 213657579 Jul 28 22:51 HITS.45743349._052135.pool.root.1
[2025-07-28 22:52:38] -rw-r--r--. 1 boinc boinc       530 Jul 28 22:51 boinc_task_state.xml
[2025-07-28 22:52:38] -rw-------. 1 boinc boinc      1020 Jul 28 22:51 memory_monitor_summary.json
[2025-07-28 22:52:38] -rw-------. 1 boinc boinc   1589827 Jul 28 22:51 agis_ddmendpoints.agis.ALL.json
[2025-07-28 22:52:38] -rw-------. 1 boinc boinc    371197 Jul 28 22:51 log.45743349._052135.job.log.tgz.1
[2025-07-28 22:52:38] -rw-------. 1 boinc boinc      7778 Jul 28 22:52 heartbeat.json
[2025-07-28 22:52:38] -rw-r--r--. 1 boinc boinc        28 Jul 28 22:52 wrapper_checkpoint.txt
[2025-07-28 22:52:38] -rw-r--r--. 1 boinc boinc      8192 Jul 28 22:52 boinc_mmap_file
[2025-07-28 22:52:38] -rw-------. 1 boinc boinc        95 Jul 28 22:52 pilot_heartbeat.json
[2025-07-28 22:52:38] -rw-------. 1 boinc boinc       890 Jul 28 22:52 pilotlog.txt
[2025-07-28 22:52:38] -rw-------. 1 boinc boinc   1198047 Jul 28 22:52 log.45743349._052135.job.log.1
[2025-07-28 22:52:38] -rw-------. 1 boinc boinc       357 Jul 28 22:52 output.list
[2025-07-28 22:52:38] -rw-r--r--. 1 boinc boinc       620 Jul 28 22:52 runtime_log
[2025-07-28 22:52:38] -rw-------. 1 boinc boinc   1587200 Jul 28 22:52 result.tar.gz
[2025-07-28 22:52:38] -rw-r--r--. 1 boinc boinc      8660 Jul 28 22:52 runtime_log.err
[2025-07-28 22:52:38] -rw-------. 1 boinc boinc       657 Jul 28 22:52 1FiNDmd8I07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKnVLDmEsdpcm.diag
[2025-07-28 22:52:38] -rw-r--r--. 1 boinc boinc     20651 Jul 28 22:52 stderr.txt
[2025-07-28 22:52:38] HITS file was successfully produced:
[2025-07-28 22:52:38] -rw-------. 1 boinc boinc 213657579 Jul 28 22:51 shared/HITS.pool.root.1
[2025-07-28 22:52:38]  *** Contents of shared directory: ***
[2025-07-28 22:52:38] total 355616
[2025-07-28 22:52:38] -rw-r--r--. 2 boinc boinc 148337557 Jul 28 19:06 ATLAS.root_0
[2025-07-28 22:52:38] -rw-r--r--. 2 boinc boinc     15095 Jul 28 19:06 start_atlas.sh
[2025-07-28 22:52:38] -rw-r--r--. 2 boinc boinc    542890 Jul 28 19:06 input.tar.gz
[2025-07-28 22:52:38] -rw-------. 1 boinc boinc 213657579 Jul 28 22:51 HITS.pool.root.1
[2025-07-28 22:52:38] -rw-------. 1 boinc boinc   1587200 Jul 28 22:52 result.tar.gz
22:52:39 (8978): run_atlas exited; CPU time 51309.660888
22:52:39 (8978): called boinc_finish(0)

</stderr_txt>
]]>

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