Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:10:52 (184535): wrapper (7.7.26015): starting
04:10:52 (184535): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 04:10:52] Arguments: --nthreads 12
[2025-07-28 04:10:52] Threads: 12
[2025-07-28 04:10:52] Checking for CVMFS
[2025-07-28 04:10:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 04:10:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 04:10:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 04:10:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 04:10:53] 2.13.1.0 184675 0 30996 148831 3 1 3633005 4097025 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-28 04:10:53] CVMFS is ok
[2025-07-28 04:10:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 04:10:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 04:10:53] Further information can be found at the LHC@home message board.
[2025-07-28 04:10:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 04:10:53] Checking for apptainer binary...
[2025-07-28 04:10:53] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-28 04:10:53] apptainer is not installed, using version from CVMFS
[2025-07-28 04:10:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 04:10:53] pckelar6.cern.ch
[2025-07-28 04:10:53] apptainer works
[2025-07-28 04:10:53] Set ATHENA_PROC_NUMBER=12
[2025-07-28 04:10:53] Set ATHENA_CORE_NUMBER=12
[2025-07-28 04:10:53] Starting ATLAS job with PandaID=6747411321
[2025-07-28 04:10:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 05:30:23]  *** The last 200 lines of the pilot log: ***
[2025-07-28 05:30:23]  status=None
[2025-07-28 05:30:23]  status_code=0
[2025-07-28 05:30:23]  storage_token=
[2025-07-28 05:30:23]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6747411321/log.45743349._048558.job.log.tgz.1
[2025-07-28 05:30:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2e/19/log.45743349._048558.job.log.tgz.1
[2025-07-28 05:30:23]  workdir=None
[2025-07-28 05:30:23] ]
[2025-07-28 05:30:23] 2025-07-28 03:29:53,836 | INFO     | monitor loop #356: job 0:6747411321 is in state 'stageout'
[2025-07-28 05:30:23] 2025-07-28 03:29:53,837 | WARNING  | aborting job monitor tasks since payload process 195918 is not running
[2025-07-28 05:30:23] 2025-07-28 03:29:53,873 | INFO     | transferring file log.45743349._048558.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6747411321/log.45743349._048558.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 05:30:23] 2025-07-28 03:29:53,874 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6747411321/log.45743349._048558.job.log.tgz.1 /var/lib/boinc/slots/0/log.45743349._048558.job
[2025-07-28 05:30:23] 2025-07-28 03:29:53,887 | INFO     | adding to output.list: log.45743349._048558.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2e/19/log.45743349._048558.job.log.tg
[2025-07-28 05:30:23] 2025-07-28 03:29:53,888 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 05:30:23] 2025-07-28 03:29:53,888 | INFO     | summary of transferred files:
[2025-07-28 05:30:23] 2025-07-28 03:29:53,888 | INFO     |  -- lfn=log.45743349._048558.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 05:30:23] 2025-07-28 03:29:53,888 | INFO     | stage-out finished correctly
[2025-07-28 05:30:23] 2025-07-28 03:29:56,340 | INFO     | monitor loop #357: job 0:6747411321 is in state 'finished'
[2025-07-28 05:30:23] 2025-07-28 03:29:56,340 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 05:30:23] 2025-07-28 03:29:57,288 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 05:30:23] 2025-07-28 03:29:58,848 | INFO     | monitor loop #358: job 0:6747411321 is in state 'finished'
[2025-07-28 05:30:23] 2025-07-28 03:29:58,848 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 05:30:23] 2025-07-28 03:29:59,956 | INFO     | job 6747411321 has state=finished
[2025-07-28 05:30:23] 2025-07-28 03:29:59,956 | INFO     | preparing for final server update for job 6747411321 in state='finished'
[2025-07-28 05:30:23] 2025-07-28 03:29:59,957 | INFO     | this job has now completed (state=finished)
[2025-07-28 05:30:23] 2025-07-28 03:29:59,957 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 05:30:23] 2025-07-28 03:29:59,957 | INFO     | log transfer has been attempted: DONE
[2025-07-28 05:30:23] 2025-07-28 03:29:59,957 | INFO     | job 6747411321 has finished - writing final server update
[2025-07-28 05:30:23] 2025-07-28 03:29:59,957 | INFO     | total number of processed events: 400 (read)
[2025-07-28 05:30:23] 2025-07-28 03:29:59,959 | INFO     | executing command: lscpu
[2025-07-28 05:30:23] 2025-07-28 03:29:59,980 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 05:30:23] 2025-07-28 03:30:01,351 | INFO     | monitor loop #359: job 0:6747411321 is in state 'finished'
[2025-07-28 05:30:23] 2025-07-28 03:30:01,351 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 05:30:23] 2025-07-28 03:30:03,854 | INFO     | monitor loop #360: job 0:6747411321 is in state 'finished'
[2025-07-28 05:30:23] 2025-07-28 03:30:03,854 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 05:30:23] 2025-07-28 03:30:04,194 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-28 05:30:23] 2025-07-28 03:30:04,196 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2598.4853333333335
[2025-07-28 05:30:23] 2025-07-28 03:30:04,198 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6747411321/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 05:30:23] 2025-07-28 03:30:04,198 | INFO     | extracted standard info from prmon json
[2025-07-28 05:30:23] 2025-07-28 03:30:04,198 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 05:30:23] 2025-07-28 03:30:04,198 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 05:30:23] 2025-07-28 03:30:04,199 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 05:30:23] 2025-07-28 03:30:04,199 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 05:30:23] 2025-07-28 03:30:04,200 | INFO     | fitting pss+swap vs Time
[2025-07-28 05:30:23] 2025-07-28 03:30:04,200 | INFO     | sum of square deviations: 110960220.0
[2025-07-28 05:30:23] 2025-07-28 03:30:04,201 | INFO     | sum of deviations: -481909881.99999994
[2025-07-28 05:30:23] 2025-07-28 03:30:04,201 | INFO     | mean x: 1753671124.0
[2025-07-28 05:30:23] 2025-07-28 03:30:04,201 | INFO     | mean y: 2842624.7746478873
[2025-07-28 05:30:23] 2025-07-28 03:30:04,201 | INFO     | -- intersect: 7619188775.076506
[2025-07-28 05:30:23] 2025-07-28 03:30:04,201 | INFO     | intersect: 7619188775.076506
[2025-07-28 05:30:23] 2025-07-28 03:30:04,201 | INFO     | chi2: 0.015051052894678254
[2025-07-28 05:30:23] 2025-07-28 03:30:04,201 | INFO     | -- intersect: 7619188775.076506
[2025-07-28 05:30:23] 2025-07-28 03:30:04,201 | INFO     | current memory leak: -4.34 B/s (using 71 data points, chi2=0.02)
[2025-07-28 05:30:23] 2025-07-28 03:30:04,202 | INFO     | could have reported an average CPU frequency of 2612 MHz (6 samples)
[2025-07-28 05:30:23] 2025-07-28 03:30:04,202 | INFO     | ..............................
[2025-07-28 05:30:23] 2025-07-28 03:30:04,202 | INFO     | . Timing measurements:
[2025-07-28 05:30:23] 2025-07-28 03:30:04,202 | INFO     | . get job = 0 s
[2025-07-28 05:30:23] 2025-07-28 03:30:04,202 | INFO     | . initial setup = 1 s
[2025-07-28 05:30:23] 2025-07-28 03:30:04,202 | INFO     | . payload setup = 5 s
[2025-07-28 05:30:23] 2025-07-28 03:30:04,202 | INFO     | . stage-in = 0 s
[2025-07-28 05:30:23] 2025-07-28 03:30:04,202 | INFO     | . payload execution = 4707 s
[2025-07-28 05:30:23] 2025-07-28 03:30:04,202 | INFO     | . stage-out = 0 s
[2025-07-28 05:30:23] 2025-07-28 03:30:04,203 | INFO     | . log creation = 0 s
[2025-07-28 05:30:23] 2025-07-28 03:30:04,203 | INFO     | ..............................
[2025-07-28 05:30:23] 2025-07-28 03:30:04,272 | INFO     | 
[2025-07-28 05:30:23] 2025-07-28 03:30:04,273 | INFO     | job summary report
[2025-07-28 05:30:23] 2025-07-28 03:30:04,273 | INFO     | --------------------------------------------------
[2025-07-28 05:30:23] 2025-07-28 03:30:04,273 | INFO     | PanDA job id: 6747411321
[2025-07-28 05:30:23] 2025-07-28 03:30:04,273 | INFO     | task id: 45743349
[2025-07-28 05:30:23] 2025-07-28 03:30:04,273 | INFO     | errors: (none)
[2025-07-28 05:30:23] 2025-07-28 03:30:04,273 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 05:30:23] 2025-07-28 03:30:04,273 | INFO     | pilot state: finished 
[2025-07-28 05:30:23] 2025-07-28 03:30:04,273 | INFO     | transexitcode: 0
[2025-07-28 05:30:23] 2025-07-28 03:30:04,273 | INFO     | exeerrorcode: 0
[2025-07-28 05:30:23] 2025-07-28 03:30:04,273 | INFO     | exeerrordiag: 
[2025-07-28 05:30:23] 2025-07-28 03:30:04,274 | INFO     | exitcode: 0
[2025-07-28 05:30:23] 2025-07-28 03:30:04,274 | INFO     | exitmsg: OK
[2025-07-28 05:30:23] 2025-07-28 03:30:04,274 | INFO     | cpuconsumptiontime: 51013 s
[2025-07-28 05:30:23] 2025-07-28 03:30:04,274 | INFO     | nevents: 400
[2025-07-28 05:30:23] 2025-07-28 03:30:04,274 | INFO     | neventsw: 0
[2025-07-28 05:30:23] 2025-07-28 03:30:04,274 | INFO     | pid: 195918
[2025-07-28 05:30:23] 2025-07-28 03:30:04,274 | INFO     | pgrp: 195918
[2025-07-28 05:30:23] 2025-07-28 03:30:04,274 | INFO     | corecount: 12
[2025-07-28 05:30:23] 2025-07-28 03:30:04,274 | INFO     | event service: False
[2025-07-28 05:30:23] 2025-07-28 03:30:04,274 | INFO     | sizes: {0: 2397475, 3: 2397737, 11: 2397765, 4717: 2424028, 4719: 2433026, 4722: 2433082, 4729: 2433404}
[2025-07-28 05:30:23] 2025-07-28 03:30:04,274 | INFO     | --------------------------------------------------
[2025-07-28 05:30:23] 2025-07-28 03:30:04,274 | INFO     | 
[2025-07-28 05:30:23] 2025-07-28 03:30:04,275 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-28 05:30:23] 2025-07-28 03:30:04,280 | INFO     | 4743s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-28 05:30:23] 2025-07-28 03:30:04,292 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,293 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,293 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,293 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,294 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,294 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,294 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,294 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,294 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,294 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,294 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 05:30:23] 2025-07-28 03:30:04,294 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,294 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 05:30:23] 2025-07-28 03:30:04,294 | INFO     | job 6747411321 has completed (purged errors)
[2025-07-28 05:30:23] 2025-07-28 03:30:04,294 | INFO     | overall cleanup function is called
[2025-07-28 05:30:23] 2025-07-28 03:30:05,301 | INFO     | --- collectZombieJob: --- 10, [195918]
[2025-07-28 05:30:23] 2025-07-28 03:30:05,301 | INFO     | zombie collector waiting for pid 195918
[2025-07-28 05:30:23] 2025-07-28 03:30:05,301 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 05:30:23] 2025-07-28 03:30:05,302 | INFO     | collected zombie processes
[2025-07-28 05:30:23] 2025-07-28 03:30:05,302 | INFO     | will attempt to kill all subprocesses of pid=195918
[2025-07-28 05:30:23] 2025-07-28 03:30:05,380 | INFO     | process IDs to be killed: [195918] (in reverse order)
[2025-07-28 05:30:23] 2025-07-28 03:30:05,412 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 05:30:23] 2025-07-28 03:30:05,412 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 05:30:23] 2025-07-28 03:30:05,414 | INFO     | did not find any defunct processes belonging to 195918
[2025-07-28 05:30:23] 2025-07-28 03:30:05,416 | INFO     | did not find any defunct processes belonging to 195918
[2025-07-28 05:30:23] 2025-07-28 03:30:05,416 | INFO     | ready for new job
[2025-07-28 05:30:23] 2025-07-28 03:30:05,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 05:30:23] 2025-07-28 03:30:05,418 | INFO     | ***************************************
[2025-07-28 05:30:23] 2025-07-28 03:30:05,418 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 05:30:23] 2025-07-28 03:30:05,418 | INFO     | ***************************************
[2025-07-28 05:30:23] 2025-07-28 03:30:05,418 | INFO     | 
[2025-07-28 05:30:23] 2025-07-28 03:30:05,418 | INFO     | architecture information:
[2025-07-28 05:30:23] 2025-07-28 03:30:05,419 | INFO     | executing command: cat /etc/os-release
[2025-07-28 05:30:23] 2025-07-28 03:30:05,429 | INFO     | cat /etc/os-release:
[2025-07-28 05:30:23] NAME="CentOS Linux"
[2025-07-28 05:30:23] VERSION="7 (Core)"
[2025-07-28 05:30:23] ID="centos"
[2025-07-28 05:30:23] ID_LIKE="rhel fedora"
[2025-07-28 05:30:23] VERSION_ID="7"
[2025-07-28 05:30:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 05:30:23] ANSI_COLOR="0;31"
[2025-07-28 05:30:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 05:30:23] HOME_URL="https://www.centos.org/"
[2025-07-28 05:30:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 05:30:23] 
[2025-07-28 05:30:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 05:30:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 05:30:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 05:30:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 05:30:23] 
[2025-07-28 05:30:23] 2025-07-28 03:30:05,429 | INFO     | ***************************************
[2025-07-28 05:30:23] 2025-07-28 03:30:05,932 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-28 05:30:23] 2025-07-28 03:30:05,943 | INFO     | sufficient remaining disk space (870013992960 B)
[2025-07-28 05:30:23] 2025-07-28 03:30:05,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 05:30:23] 2025-07-28 03:30:05,943 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 05:30:23] 2025-07-28 03:30:05,943 | INFO     | update_server=False
[2025-07-28 05:30:23] 2025-07-28 03:30:05,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 05:30:23] 2025-07-28 03:30:05,944 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 05:30:23] 2025-07-28 03:30:05,944 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 05:30:23] 2025-07-28 03:30:05,944 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 05:30:23] 2025-07-28 03:30:05,944 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 05:30:23] 2025-07-28 03:30:05,944 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 05:30:23] 2025-07-28 03:30:06,062 | INFO     | all job control threads have been joined
[2025-07-28 05:30:23] 2025-07-28 03:30:06,357 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 05:30:23] 2025-07-28 03:30:06,357 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 05:30:23] 2025-07-28 03:30:06,357 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 05:30:23] 2025-07-28 03:30:06,357 | INFO     | will abort loop
[2025-07-28 05:30:23] 2025-07-28 03:30:06,944 | INFO     | all data control threads have been joined
[2025-07-28 05:30:23] 2025-07-28 03:30:06,949 | INFO     | [job] retrieve thread has finished
[2025-07-28 05:30:23] 2025-07-28 03:30:06,949 | INFO     | [job] queue monitor thread has finished
[2025-07-28 05:30:23] 2025-07-28 03:30:06,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 05:30:23] 2025-07-28 03:30:07,068 | INFO     | [job] control thread has finished
[2025-07-28 05:30:23] 2025-07-28 03:30:07,246 | INFO     | [payload] failed_post thread has finished
[2025-07-28 05:30:23] 2025-07-28 03:30:07,292 | INFO     | all payload control threads have been joined
[2025-07-28 05:30:23] 2025-07-28 03:30:07,362 | INFO     | [job] job monitor thread has finished
[2025-07-28 05:30:23] 2025-07-28 03:30:07,729 | INFO     | [payload] validate_post thread has finished
[2025-07-28 05:30:23] 2025-07-28 03:30:07,775 | INFO     | [job] validate thread has finished
[2025-07-28 05:30:23] 2025-07-28 03:30:07,859 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 05:30:23] 2025-07-28 03:30:07,898 | INFO     | [data] copytool_in thread has finished
[2025-07-28 05:30:23] 2025-07-28 03:30:07,937 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 05:30:23] 2025-07-28 03:30:07,949 | INFO     | [data] control thread has finished
[2025-07-28 05:30:23] 2025-07-28 03:30:08,229 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 05:30:23] 2025-07-28 03:30:08,274 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 05:30:23] 2025-07-28 03:30:08,297 | INFO     | [payload] control thread has finished
[2025-07-28 05:30:23] 2025-07-28 03:30:08,978 | INFO     | [data] copytool_out thread has finished
[2025-07-28 05:30:23] 2025-07-28 03:30:11,865 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 05:30:23] 2025-07-28 03:30:16,750 | INFO     | job.realtimelogging is not enabled
[2025-07-28 05:30:23] 2025-07-28 03:30:17,756 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 05:30:23] 2025-07-28 03:30:17,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139891763160896)>', '<ExcThread(monitor, started 139891220399872)>']
[2025-07-28 05:30:23] 2025-07-28 03:30:18,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 05:30:23] 2025-07-28 03:30:18,003 | INFO     | [monitor] control thread has ended
[2025-07-28 05:30:23] 2025-07-28 03:30:22,918 | INFO     | all workflow threads have been joined
[2025-07-28 05:30:23] 2025-07-28 03:30:22,918 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 05:30:23] 2025-07-28 03:30:22,918 | INFO     | traces error code: 0
[2025-07-28 05:30:23] 2025-07-28 03:30:22,918 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 05:30:23] 2025-07-28 03:30:22,997 [wrapper] ==== pilot stdout END ====
[2025-07-28 05:30:23] 2025-07-28 03:30:23,000 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 05:30:23] 2025-07-28 03:30:23,003 [wrapper] pilotpid: 188738
[2025-07-28 05:30:23] 2025-07-28 03:30:23,005 [wrapper] Pilot exit status: 0
[2025-07-28 05:30:23] 2025-07-28 03:30:23,014 [wrapper] pandaids: 6747411321
[2025-07-28 05:30:23] 2025-07-28 03:30:23,035 [wrapper] cleanup supervisor_pilot  214060 188739
[2025-07-28 05:30:23] 2025-07-28 03:30:23,037 [wrapper] Test setup, not cleaning
[2025-07-28 05:30:23] 2025-07-28 03:30:23,039 [wrapper] apfmon messages muted
[2025-07-28 05:30:23] 2025-07-28 03:30:23,041 [wrapper] ==== wrapper stdout END ====
[2025-07-28 05:30:23] 2025-07-28 03:30:23,042 [wrapper] ==== wrapper stderr END ====
[2025-07-28 05:30:23]  *** Error codes and diagnostics ***
[2025-07-28 05:30:23]     "exeErrorCode": 0,
[2025-07-28 05:30:23]     "exeErrorDiag": "",
[2025-07-28 05:30:23]     "pilotErrorCode": 0,
[2025-07-28 05:30:23]     "pilotErrorDiag": "",
[2025-07-28 05:30:23]  *** Listing of results directory ***
[2025-07-28 05:30:23] total 357252
[2025-07-28 05:30:23] -rw-r--r--. 1 boinc boinc    530466 Jul 27 13:59 pilot3.tar.gz
[2025-07-28 05:30:23] -rw-r--r--. 1 boinc boinc      5112 Jul 27 14:39 queuedata.json
[2025-07-28 05:30:23] -rwx------. 1 boinc boinc     36292 Jul 27 14:41 runpilot2-wrapper.sh
[2025-07-28 05:30:23] -rw-r--r--. 1 boinc boinc       100 Jul 28 04:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 05:30:23] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 04:10 run_atlas
[2025-07-28 05:30:23] -rw-r--r--. 1 boinc boinc       105 Jul 28 04:10 job.xml
[2025-07-28 05:30:23] -rw-r--r--. 1 boinc boinc      6291 Jul 28 04:10 init_data.xml
[2025-07-28 05:30:23] -rw-r--r--. 2 boinc boinc 147808572 Jul 28 04:10 EVNT.45743347._002693.pool.root.1
[2025-07-28 05:30:23] -rw-r--r--. 2 boinc boinc     15095 Jul 28 04:10 start_atlas.sh
[2025-07-28 05:30:23] drwxrwx--x. 2 boinc boinc        68 Jul 28 04:10 shared
[2025-07-28 05:30:23] -rw-r--r--. 2 boinc boinc    542901 Jul 28 04:10 input.tar.gz
[2025-07-28 05:30:23] -rw-r--r--. 1 boinc boinc         0 Jul 28 04:10 boinc_lockfile
[2025-07-28 05:30:23] -rw-r--r--. 1 boinc boinc      2563 Jul 28 04:10 pandaJob.out
[2025-07-28 05:30:23] -rw-------. 1 boinc boinc    980125 Jul 28 04:11 agis_schedconf.cvmfs.json
[2025-07-28 05:30:23] -rw-------. 1 boinc boinc   1593052 Jul 28 04:11 agis_ddmendpoints.agis.ALL.json
[2025-07-28 05:30:23] drwx------. 4 boinc boinc      4096 Jul 28 04:11 pilot3
[2025-07-28 05:30:23] -rw-------. 1 boinc boinc 212529093 Jul 28 05:29 HITS.45743349._048558.pool.root.1
[2025-07-28 05:30:23] -rw-r--r--. 1 boinc boinc       529 Jul 28 05:29 boinc_task_state.xml
[2025-07-28 05:30:23] -rw-------. 1 boinc boinc      1018 Jul 28 05:29 memory_monitor_summary.json
[2025-07-28 05:30:23] -rw-------. 1 boinc boinc    353107 Jul 28 05:29 log.45743349._048558.job.log.tgz.1
[2025-07-28 05:30:23] -rw-------. 1 boinc boinc        95 Jul 28 05:30 pilot_heartbeat.json
[2025-07-28 05:30:23] -rw-------. 1 boinc boinc      7794 Jul 28 05:30 heartbeat.json
[2025-07-28 05:30:23] -rw-r--r--. 1 boinc boinc      8192 Jul 28 05:30 boinc_mmap_file
[2025-07-28 05:30:23] -rw-r--r--. 1 boinc boinc        27 Jul 28 05:30 wrapper_checkpoint.txt
[2025-07-28 05:30:23] -rw-------. 1 boinc boinc      4739 Jul 28 05:30 pilotlog.txt
[2025-07-28 05:30:23] -rw-------. 1 boinc boinc    455150 Jul 28 05:30 log.45743349._048558.job.log.1
[2025-07-28 05:30:23] -rw-------. 1 boinc boinc       357 Jul 28 05:30 output.list
[2025-07-28 05:30:23] -rw-r--r--. 1 boinc boinc       620 Jul 28 05:30 runtime_log
[2025-07-28 05:30:23] -rw-------. 1 boinc boinc    829440 Jul 28 05:30 result.tar.gz
[2025-07-28 05:30:23] -rw-r--r--. 1 boinc boinc      8684 Jul 28 05:30 runtime_log.err
[2025-07-28 05:30:23] -rw-------. 1 boinc boinc       656 Jul 28 05:30 JMCNDmMsF07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCIVLDmTtSTJo.diag
[2025-07-28 05:30:23] -rw-r--r--. 1 boinc boinc     22054 Jul 28 05:30 stderr.txt
[2025-07-28 05:30:23] HITS file was successfully produced:
[2025-07-28 05:30:23] -rw-------. 1 boinc boinc 212529093 Jul 28 05:29 shared/HITS.pool.root.1
[2025-07-28 05:30:23]  *** Contents of shared directory: ***
[2025-07-28 05:30:23] total 353256
[2025-07-28 05:30:23] -rw-r--r--. 2 boinc boinc 147808572 Jul 28 04:10 ATLAS.root_0
[2025-07-28 05:30:23] -rw-r--r--. 2 boinc boinc     15095 Jul 28 04:10 start_atlas.sh
[2025-07-28 05:30:23] -rw-r--r--. 2 boinc boinc    542901 Jul 28 04:10 input.tar.gz
[2025-07-28 05:30:23] -rw-------. 1 boinc boinc 212529093 Jul 28 05:29 HITS.pool.root.1
[2025-07-28 05:30:23] -rw-------. 1 boinc boinc    829440 Jul 28 05:30 result.tar.gz
05:30:24 (184535): run_atlas exited; CPU time 51046.210367
05:30:24 (184535): called boinc_finish(0)

</stderr_txt>
]]>

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