Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:02:37 (1714248): wrapper (7.7.26015): starting
17:02:37 (1714248): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 17:02:37] Arguments: --nthreads 8
[2025-07-27 17:02:37] Threads: 8
[2025-07-27 17:02:37] Checking for CVMFS
[2025-07-27 17:02:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:02:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:02:37] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:02:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:02:37] 2.13.1.0 704839 14636 160044 148823 2 196 32337667 40960000 9492 16776704 0 43874534 99.891 17311336 42286 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 17:02:37] CVMFS is ok
[2025-07-27 17:02:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:02:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:02:37] Further information can be found at the LHC@home message board.
[2025-07-27 17:02:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:02:37] Checking for apptainer binary...
[2025-07-27 17:02:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:02:37] Running /usr/bin/apptainer --version
[2025-07-27 17:02:37] apptainer version 1.4.1-1.el9
[2025-07-27 17:02:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:02:38] c-212-4.aglt2.org
[2025-07-27 17:02:38] apptainer works
[2025-07-27 17:02:38] Set ATHENA_PROC_NUMBER=8
[2025-07-27 17:02:38] Set ATHENA_CORE_NUMBER=8
[2025-07-27 17:02:38] Starting ATLAS job with PandaID=6747410997
[2025-07-27 17:02:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 18:23:40]  *** The last 200 lines of the pilot log: ***
[2025-07-27 18:23:40]  replicas=None
[2025-07-27 18:23:40]  scope=mc23_13p6TeV
[2025-07-27 18:23:40]  status=None
[2025-07-27 18:23:40]  status_code=0
[2025-07-27 18:23:40]  storage_token=
[2025-07-27 18:23:40]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747410997/log.45743349._048276.job.log.tgz.1
[2025-07-27 18:23:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/01/log.45743349._048276.job.log.tgz.1
[2025-07-27 18:23:40]  workdir=None
[2025-07-27 18:23:40] ]
[2025-07-27 18:23:40] 2025-07-27 22:22:57,660 | INFO     | transferring file log.45743349._048276.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747410997/log.45743349._048276.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 18:23:40] 2025-07-27 22:22:57,660 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747410997/log.45743349._048276.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._048276.job
[2025-07-27 18:23:40] 2025-07-27 22:22:57,689 | INFO     | adding to output.list: log.45743349._048276.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/01/log.45743349._048276.job.log.tg
[2025-07-27 18:23:40] 2025-07-27 22:22:57,690 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 18:23:40] 2025-07-27 22:22:57,690 | INFO     | summary of transferred files:
[2025-07-27 18:23:40] 2025-07-27 22:22:57,690 | INFO     |  -- lfn=log.45743349._048276.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 18:23:40] 2025-07-27 22:22:57,691 | INFO     | stage-out finished correctly
[2025-07-27 18:23:40] 2025-07-27 22:22:59,500 | INFO     | PID=1718353 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 18:23:40] 2025-07-27 22:22:59,500 | INFO     | .. there are 14 such processes running
[2025-07-27 18:23:40] 2025-07-27 22:22:59,630 | INFO     | monitor loop #351: job 0:6747410997 is in state 'finished'
[2025-07-27 18:23:40] 2025-07-27 22:22:59,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:23:40] 2025-07-27 22:23:01,251 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 18:23:40] 2025-07-27 22:23:02,135 | INFO     | monitor loop #352: job 0:6747410997 is in state 'finished'
[2025-07-27 18:23:40] 2025-07-27 22:23:02,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:23:40] 2025-07-27 22:23:02,263 | INFO     | job 6747410997 has state=finished
[2025-07-27 18:23:40] 2025-07-27 22:23:02,263 | INFO     | preparing for final server update for job 6747410997 in state='finished'
[2025-07-27 18:23:40] 2025-07-27 22:23:02,263 | INFO     | this job has now completed (state=finished)
[2025-07-27 18:23:40] 2025-07-27 22:23:02,263 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 18:23:40] 2025-07-27 22:23:02,264 | INFO     | log transfer has been attempted: DONE
[2025-07-27 18:23:40] 2025-07-27 22:23:02,264 | INFO     | job 6747410997 has finished - writing final server update
[2025-07-27 18:23:40] 2025-07-27 22:23:02,264 | INFO     | total number of processed events: 400 (read)
[2025-07-27 18:23:40] 2025-07-27 22:23:02,264 | INFO     | executing command: lscpu
[2025-07-27 18:23:40] 2025-07-27 22:23:02,328 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 18:23:40] 2025-07-27 22:23:04,640 | INFO     | monitor loop #353: job 0:6747410997 is in state 'finished'
[2025-07-27 18:23:40] 2025-07-27 22:23:04,640 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:23:40] 2025-07-27 22:23:07,143 | INFO     | monitor loop #354: job 0:6747410997 is in state 'finished'
[2025-07-27 18:23:40] 2025-07-27 22:23:07,143 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:23:40] 2025-07-27 22:23:08,082 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 18:23:40] 2025-07-27 22:23:08,086 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3306.302895833333
[2025-07-27 18:23:40] 2025-07-27 22:23:08,099 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747410997/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:23:40] 2025-07-27 22:23:08,100 | INFO     | extracted standard info from prmon json
[2025-07-27 18:23:40] 2025-07-27 22:23:08,100 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 18:23:40] 2025-07-27 22:23:08,100 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 18:23:40] 2025-07-27 22:23:08,100 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 18:23:40] 2025-07-27 22:23:08,100 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 18:23:40] 2025-07-27 22:23:08,102 | INFO     | fitting pss+swap vs Time
[2025-07-27 18:23:40] 2025-07-27 22:23:08,102 | INFO     | sum of square deviations: 115715658.0
[2025-07-27 18:23:40] 2025-07-27 22:23:08,103 | INFO     | sum of deviations: 645087657.4999998
[2025-07-27 18:23:40] 2025-07-27 22:23:08,103 | INFO     | mean x: 1753652670.5
[2025-07-27 18:23:40] 2025-07-27 22:23:08,103 | INFO     | mean y: 2509813.2083333335
[2025-07-27 18:23:40] 2025-07-27 22:23:08,103 | INFO     | -- intersect: -9773692585.273157
[2025-07-27 18:23:40] 2025-07-27 22:23:08,103 | INFO     | intersect: -9773692585.273157
[2025-07-27 18:23:40] 2025-07-27 22:23:08,103 | INFO     | chi2: 0.0015198112482396004
[2025-07-27 18:23:40] 2025-07-27 22:23:08,103 | INFO     | -- intersect: -9773692585.273157
[2025-07-27 18:23:40] 2025-07-27 22:23:08,104 | INFO     | current memory leak: 5.57 B/s (using 72 data points, chi2=0.00)
[2025-07-27 18:23:40] 2025-07-27 22:23:08,104 | INFO     | could have reported an average CPU frequency of 3265 MHz (6 samples)
[2025-07-27 18:23:40] 2025-07-27 22:23:08,104 | INFO     | ..............................
[2025-07-27 18:23:40] 2025-07-27 22:23:08,104 | INFO     | . Timing measurements:
[2025-07-27 18:23:40] 2025-07-27 22:23:08,104 | INFO     | . get job = 0 s
[2025-07-27 18:23:40] 2025-07-27 22:23:08,104 | INFO     | . initial setup = 2 s
[2025-07-27 18:23:40] 2025-07-27 22:23:08,104 | INFO     | . payload setup = 7 s
[2025-07-27 18:23:40] 2025-07-27 22:23:08,104 | INFO     | . stage-in = 0 s
[2025-07-27 18:23:40] 2025-07-27 22:23:08,105 | INFO     | . payload execution = 4777 s
[2025-07-27 18:23:40] 2025-07-27 22:23:08,105 | INFO     | . stage-out = 0 s
[2025-07-27 18:23:40] 2025-07-27 22:23:08,105 | INFO     | . log creation = 0 s
[2025-07-27 18:23:40] 2025-07-27 22:23:08,105 | INFO     | ..............................
[2025-07-27 18:23:40] 2025-07-27 22:23:08,189 | INFO     | 
[2025-07-27 18:23:40] 2025-07-27 22:23:08,189 | INFO     | job summary report
[2025-07-27 18:23:40] 2025-07-27 22:23:08,189 | INFO     | --------------------------------------------------
[2025-07-27 18:23:40] 2025-07-27 22:23:08,189 | INFO     | PanDA job id: 6747410997
[2025-07-27 18:23:40] 2025-07-27 22:23:08,189 | INFO     | task id: 45743349
[2025-07-27 18:23:40] 2025-07-27 22:23:08,190 | INFO     | errors: (none)
[2025-07-27 18:23:40] 2025-07-27 22:23:08,190 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 18:23:40] 2025-07-27 22:23:08,190 | INFO     | pilot state: finished 
[2025-07-27 18:23:40] 2025-07-27 22:23:08,190 | INFO     | transexitcode: 0
[2025-07-27 18:23:40] 2025-07-27 22:23:08,190 | INFO     | exeerrorcode: 0
[2025-07-27 18:23:40] 2025-07-27 22:23:08,190 | INFO     | exeerrordiag: 
[2025-07-27 18:23:40] 2025-07-27 22:23:08,190 | INFO     | exitcode: 0
[2025-07-27 18:23:40] 2025-07-27 22:23:08,190 | INFO     | exitmsg: OK
[2025-07-27 18:23:40] 2025-07-27 22:23:08,190 | INFO     | cpuconsumptiontime: 34462 s
[2025-07-27 18:23:40] 2025-07-27 22:23:08,190 | INFO     | nevents: 400
[2025-07-27 18:23:40] 2025-07-27 22:23:08,190 | INFO     | neventsw: 0
[2025-07-27 18:23:40] 2025-07-27 22:23:08,190 | INFO     | pid: 1732524
[2025-07-27 18:23:40] 2025-07-27 22:23:08,190 | INFO     | pgrp: 1732524
[2025-07-27 18:23:40] 2025-07-27 22:23:08,190 | INFO     | corecount: 8
[2025-07-27 18:23:40] 2025-07-27 22:23:08,190 | INFO     | event service: False
[2025-07-27 18:23:40] 2025-07-27 22:23:08,191 | INFO     | sizes: {0: 2397475, 5: 2397737, 11: 2397793, 4788: 2423878, 4789: 2423877, 4791: 2432959, 4794: 2433143, 4801: 2433337}
[2025-07-27 18:23:40] 2025-07-27 22:23:08,191 | INFO     | --------------------------------------------------
[2025-07-27 18:23:40] 2025-07-27 22:23:08,191 | INFO     | 
[2025-07-27 18:23:40] 2025-07-27 22:23:08,191 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 18:23:40] 2025-07-27 22:23:08,216 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,217 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,217 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,217 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,217 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,217 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,217 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,217 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,217 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,217 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,217 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,218 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,218 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,218 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,218 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,218 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,218 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,218 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 18:23:40] 2025-07-27 22:23:08,218 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,218 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 18:23:40] 2025-07-27 22:23:08,218 | INFO     | job 6747410997 has completed (purged errors)
[2025-07-27 18:23:40] 2025-07-27 22:23:08,218 | INFO     | overall cleanup function is called
[2025-07-27 18:23:40] 2025-07-27 22:23:09,228 | INFO     | --- collectZombieJob: --- 10, [1732524]
[2025-07-27 18:23:40] 2025-07-27 22:23:09,228 | INFO     | zombie collector waiting for pid 1732524
[2025-07-27 18:23:40] 2025-07-27 22:23:09,228 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 18:23:40] 2025-07-27 22:23:09,228 | INFO     | collected zombie processes
[2025-07-27 18:23:40] 2025-07-27 22:23:09,228 | INFO     | will attempt to kill all subprocesses of pid=1732524
[2025-07-27 18:23:40] 2025-07-27 22:23:09,606 | INFO     | process IDs to be killed: [1732524] (in reverse order)
[2025-07-27 18:23:40] 2025-07-27 22:23:09,739 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 18:23:40] 2025-07-27 22:23:09,739 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 18:23:40] 2025-07-27 22:23:09,753 | INFO     | did not find any defunct processes belonging to 1732524
[2025-07-27 18:23:40] 2025-07-27 22:23:09,763 | INFO     | did not find any defunct processes belonging to 1732524
[2025-07-27 18:23:40] 2025-07-27 22:23:09,763 | INFO     | ready for new job
[2025-07-27 18:23:40] 2025-07-27 22:23:09,764 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 18:23:40] 2025-07-27 22:23:09,765 | INFO     | ***************************************
[2025-07-27 18:23:40] 2025-07-27 22:23:09,765 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 18:23:40] 2025-07-27 22:23:09,765 | INFO     | ***************************************
[2025-07-27 18:23:40] 2025-07-27 22:23:09,766 | INFO     | 
[2025-07-27 18:23:40] 2025-07-27 22:23:09,770 | INFO     | architecture information:
[2025-07-27 18:23:40] 2025-07-27 22:23:09,770 | INFO     | executing command: cat /etc/os-release
[2025-07-27 18:23:40] 2025-07-27 22:23:09,789 | INFO     | cat /etc/os-release:
[2025-07-27 18:23:40] NAME="CentOS Linux"
[2025-07-27 18:23:40] VERSION="7 (Core)"
[2025-07-27 18:23:40] ID="centos"
[2025-07-27 18:23:40] ID_LIKE="rhel fedora"
[2025-07-27 18:23:40] VERSION_ID="7"
[2025-07-27 18:23:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 18:23:40] ANSI_COLOR="0;31"
[2025-07-27 18:23:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 18:23:40] HOME_URL="https://www.centos.org/"
[2025-07-27 18:23:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 18:23:40] 
[2025-07-27 18:23:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 18:23:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 18:23:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 18:23:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 18:23:40] 
[2025-07-27 18:23:40] 2025-07-27 22:23:09,789 | INFO     | ***************************************
[2025-07-27 18:23:40] 2025-07-27 22:23:10,291 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 18:23:40] 2025-07-27 22:23:10,313 | INFO     | sufficient remaining disk space (123887157248 B)
[2025-07-27 18:23:40] 2025-07-27 22:23:10,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 18:23:40] 2025-07-27 22:23:10,314 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 18:23:40] 2025-07-27 22:23:10,314 | INFO     | update_server=False
[2025-07-27 18:23:40] 2025-07-27 22:23:10,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 18:23:40] 2025-07-27 22:23:10,318 | INFO     | all job control threads have been joined
[2025-07-27 18:23:40] 2025-07-27 22:23:10,321 | INFO     | all payload control threads have been joined
[2025-07-27 18:23:40] 2025-07-27 22:23:10,656 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:23:40] 2025-07-27 22:23:10,656 | INFO     | aborting loop
[2025-07-27 18:23:40] 2025-07-27 22:23:10,792 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 18:23:40] 2025-07-27 22:23:10,916 | INFO     | all data control threads have been joined
[2025-07-27 18:23:40] 2025-07-27 22:23:11,319 | INFO     | [job] retrieve thread has finished
[2025-07-27 18:23:40] 2025-07-27 22:23:11,324 | INFO     | [job] control thread has finished
[2025-07-27 18:23:40] 2025-07-27 22:23:11,331 | INFO     | [payload] control thread has finished
[2025-07-27 18:23:40] 2025-07-27 22:23:11,492 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 18:23:40] 2025-07-27 22:23:11,608 | INFO     | [job] validate thread has finished
[2025-07-27 18:23:40] 2025-07-27 22:23:11,662 | INFO     | [job] job monitor thread has finished
[2025-07-27 18:23:40] 2025-07-27 22:23:11,837 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 18:23:40] 2025-07-27 22:23:11,921 | INFO     | [data] control thread has finished
[2025-07-27 18:23:40] 2025-07-27 22:23:12,059 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 18:23:40] 2025-07-27 22:23:12,177 | INFO     | [payload] failed_post thread has finished
[2025-07-27 18:23:40] 2025-07-27 22:23:12,676 | INFO     | [data] copytool_in thread has finished
[2025-07-27 18:23:40] 2025-07-27 22:23:12,741 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 18:23:40] 2025-07-27 22:23:12,799 | INFO     | [data] copytool_out thread has finished
[2025-07-27 18:23:40] 2025-07-27 22:23:12,865 | INFO     | [payload] validate_post thread has finished
[2025-07-27 18:23:40] 2025-07-27 22:23:13,202 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:23:40] 2025-07-27 22:23:14,208 | INFO     | [job] queue monitor thread has finished
[2025-07-27 18:23:40] 2025-07-27 22:23:15,841 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 18:23:40] 2025-07-27 22:23:20,998 | INFO     | job.realtimelogging is not enabled
[2025-07-27 18:23:40] 2025-07-27 22:23:22,004 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 18:23:40] 2025-07-27 22:23:23,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140674006611776)>', '<ExcThread(monitor, started 140673508427520)>']
[2025-07-27 18:23:40] 2025-07-27 22:23:28,698 | INFO     | all workflow threads have been joined
[2025-07-27 18:23:40] 2025-07-27 22:23:28,698 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 18:23:40] 2025-07-27 22:23:28,698 | INFO     | traces error code: 0
[2025-07-27 18:23:40] 2025-07-27 22:23:28,698 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 18:23:40] 2025-07-27 22:23:39,996 | INFO     | PID=1718353 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 18:23:40] 2025-07-27 22:23:39,997 | INFO     | .. there are 14 such processes running
[2025-07-27 18:23:40] 2025-07-27 22:23:39,998 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 18:23:40] 2025-07-27 22:23:39,998 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 18:23:40] 2025-07-27 22:23:39,998 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 18:23:40] 2025-07-27 22:23:39,998 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 18:23:40] 2025-07-27 22:23:39,998 | INFO     | [monitor] control thread has ended
[2025-07-27 18:23:40] 2025-07-27 22:23:40,162 [wrapper] ==== pilot stdout END ====
[2025-07-27 18:23:40] 2025-07-27 22:23:40,167 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 18:23:40] 2025-07-27 22:23:40,172 [wrapper] pilotpid: 1718353
[2025-07-27 18:23:40] 2025-07-27 22:23:40,176 [wrapper] Pilot exit status: 0
[2025-07-27 18:23:40] 2025-07-27 22:23:40,197 [wrapper] pandaids: 6747410997
[2025-07-27 18:23:40] 2025-07-27 22:23:40,290 [wrapper] cleanup supervisor_pilot 2043967 1718354
[2025-07-27 18:23:40] 2025-07-27 22:23:40,295 [wrapper] Test setup, not cleaning
[2025-07-27 18:23:40] 2025-07-27 22:23:40,300 [wrapper] apfmon messages muted
[2025-07-27 18:23:40] 2025-07-27 22:23:40,305 [wrapper] ==== wrapper stdout END ====
[2025-07-27 18:23:40] 2025-07-27 22:23:40,309 [wrapper] ==== wrapper stderr END ====
[2025-07-27 18:23:40]  *** Error codes and diagnostics ***
[2025-07-27 18:23:40]     "exeErrorCode": 0,
[2025-07-27 18:23:40]     "exeErrorDiag": "",
[2025-07-27 18:23:40]     "pilotErrorCode": 0,
[2025-07-27 18:23:40]     "pilotErrorDiag": "",
[2025-07-27 18:23:40]  *** Listing of results directory ***
[2025-07-27 18:23:40] total 351780
[2025-07-27 18:23:40] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 07:59 pilot3.tar.gz
[2025-07-27 18:23:40] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 08:24 queuedata.json
[2025-07-27 18:23:40] -rwx------. 1 boincer umatlas     36292 Jul 27 08:24 runpilot2-wrapper.sh
[2025-07-27 18:23:40] -rw-r--r--. 1 boincer umatlas       100 Jul 27 17:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 18:23:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 17:02 run_atlas
[2025-07-27 18:23:40] -rw-r--r--. 1 boincer umatlas       105 Jul 27 17:02 job.xml
[2025-07-27 18:23:40] -rw-r--r--. 2 boincer umatlas 146675075 Jul 27 17:02 EVNT.45743347._002674.pool.root.1
[2025-07-27 18:23:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:02 start_atlas.sh
[2025-07-27 18:23:40] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 17:02 shared
[2025-07-27 18:23:40] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 17:02 input.tar.gz
[2025-07-27 18:23:40] -rw-r--r--. 1 boincer umatlas         0 Jul 27 17:02 boinc_lockfile
[2025-07-27 18:23:40] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 17:02 pandaJob.out
[2025-07-27 18:23:40] -rw-------. 1 boincer umatlas    980109 Jul 27 17:02 agis_schedconf.cvmfs.json
[2025-07-27 18:23:40] -rw-------. 1 boincer umatlas   1593052 Jul 27 17:02 agis_ddmendpoints.agis.ALL.json
[2025-07-27 18:23:40] drwx------. 4 boincer umatlas      4096 Jul 27 17:02 pilot3
[2025-07-27 18:23:40] -rw-r--r--. 1 boincer umatlas      6945 Jul 27 18:20 init_data.xml
[2025-07-27 18:23:40] -rw-------. 1 boincer umatlas 208117620 Jul 27 18:22 HITS.45743349._048276.pool.root.1
[2025-07-27 18:23:40] -rw-r--r--. 1 boincer umatlas       529 Jul 27 18:22 boinc_task_state.xml
[2025-07-27 18:23:40] -rw-------. 1 boincer umatlas      1027 Jul 27 18:22 memory_monitor_summary.json
[2025-07-27 18:23:40] -rw-------. 1 boincer umatlas    306932 Jul 27 18:22 log.45743349._048276.job.log.tgz.1
[2025-07-27 18:23:40] -rw-------. 1 boincer umatlas      7763 Jul 27 18:23 heartbeat.json
[2025-07-27 18:23:40] -rw-r--r--. 1 boincer umatlas        27 Jul 27 18:23 wrapper_checkpoint.txt
[2025-07-27 18:23:40] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 18:23 boinc_mmap_file
[2025-07-27 18:23:40] -rw-------. 1 boincer umatlas        95 Jul 27 18:23 pilot_heartbeat.json
[2025-07-27 18:23:40] -rw-------. 1 boincer umatlas       823 Jul 27 18:23 pilotlog.txt
[2025-07-27 18:23:40] -rw-------. 1 boincer umatlas    470988 Jul 27 18:23 log.45743349._048276.job.log.1
[2025-07-27 18:23:40] -rw-------. 1 boincer umatlas       357 Jul 27 18:23 output.list
[2025-07-27 18:23:40] -rw-r--r--. 1 boincer umatlas       620 Jul 27 18:23 runtime_log
[2025-07-27 18:23:40] -rw-------. 1 boincer umatlas    798720 Jul 27 18:23 result.tar.gz
[2025-07-27 18:23:40] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 18:23 runtime_log.err
[2025-07-27 18:23:40] -rw-------. 1 boincer umatlas       650 Jul 27 18:23 R48KDmQbF07n9Rq4apOajLDm4fhM0noT9bVof3QYDmaX2KDmbSYYln.diag
[2025-07-27 18:23:40] -rw-r--r--. 1 boincer umatlas     21968 Jul 27 18:23 stderr.txt
[2025-07-27 18:23:40] HITS file was successfully produced:
[2025-07-27 18:23:40] -rw-------. 1 boincer umatlas 208117620 Jul 27 18:22 shared/HITS.pool.root.1
[2025-07-27 18:23:40]  *** Contents of shared directory: ***
[2025-07-27 18:23:40] total 347816
[2025-07-27 18:23:40] -rw-r--r--. 2 boincer umatlas 146675075 Jul 27 17:02 ATLAS.root_0
[2025-07-27 18:23:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:02 start_atlas.sh
[2025-07-27 18:23:40] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 17:02 input.tar.gz
[2025-07-27 18:23:40] -rw-------. 1 boincer umatlas 208117620 Jul 27 18:22 HITS.pool.root.1
[2025-07-27 18:23:40] -rw-------. 1 boincer umatlas    798720 Jul 27 18:23 result.tar.gz
18:23:42 (1714248): run_atlas exited; CPU time 34595.598731
18:23:42 (1714248): called boinc_finish(0)

</stderr_txt>
]]>

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