Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:01:12 (24955): wrapper (7.7.26015): starting
17:01:12 (24955): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 17:01:12] Arguments: --nthreads 12
[2025-07-27 17:01:12] Threads: 12
[2025-07-27 17:01:12] Checking for CVMFS
[2025-07-27 17:01:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:01:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:01:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:01:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:01:12] 2.11.2.0 2914 112515 95232 148823 3 59 15574815 20275200 1 130560 0 38203144 99.969 9742781 10658 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 17:01:12] CVMFS is ok
[2025-07-27 17:01:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:01:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:01:12] Further information can be found at the LHC@home message board.
[2025-07-27 17:01:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:01:12] Checking for apptainer binary...
[2025-07-27 17:01:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:01:12] Running /usr/bin/apptainer --version
[2025-07-27 17:01:12] apptainer version 1.3.2-1.el7
[2025-07-27 17:01:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:01:14] c-205-5.aglt2.org
[2025-07-27 17:01:14] apptainer works
[2025-07-27 17:01:14] Set ATHENA_PROC_NUMBER=12
[2025-07-27 17:01:14] Set ATHENA_CORE_NUMBER=12
[2025-07-27 17:01:14] Starting ATLAS job with PandaID=6747524941
[2025-07-27 17:01:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 18:25:52]  *** The last 200 lines of the pilot log: ***
[2025-07-27 18:25:52]  lfn=log.45743349._051854.job.log.tgz.1
[2025-07-27 18:25:52]  mtime=0
[2025-07-27 18:25:52]  protocol_id=None
[2025-07-27 18:25:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 18:25:52]  replicas=None
[2025-07-27 18:25:52]  scope=mc23_13p6TeV
[2025-07-27 18:25:52]  status=None
[2025-07-27 18:25:52]  status_code=0
[2025-07-27 18:25:52]  storage_token=
[2025-07-27 18:25:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747524941/log.45743349._051854.job.log.tgz.1
[2025-07-27 18:25:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/26/log.45743349._051854.job.log.tgz.1
[2025-07-27 18:25:52]  workdir=None
[2025-07-27 18:25:52] ]
[2025-07-27 18:25:52] 2025-07-27 22:25:10,152 | INFO     | transferring file log.45743349._051854.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747524941/log.45743349._051854.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 18:25:52] 2025-07-27 22:25:10,153 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747524941/log.45743349._051854.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._051854.job
[2025-07-27 18:25:52] 2025-07-27 22:25:10,176 | INFO     | adding to output.list: log.45743349._051854.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/26/log.45743349._051854.job.log.tg
[2025-07-27 18:25:52] 2025-07-27 22:25:10,176 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 18:25:52] 2025-07-27 22:25:10,177 | INFO     | summary of transferred files:
[2025-07-27 18:25:52] 2025-07-27 22:25:10,177 | INFO     |  -- lfn=log.45743349._051854.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 18:25:52] 2025-07-27 22:25:10,177 | INFO     | stage-out finished correctly
[2025-07-27 18:25:52] 2025-07-27 22:25:11,074 | INFO     | monitor loop #378: job 0:6747524941 is in state 'finished'
[2025-07-27 18:25:52] 2025-07-27 22:25:11,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:25:52] 2025-07-27 22:25:13,577 | INFO     | monitor loop #379: job 0:6747524941 is in state 'finished'
[2025-07-27 18:25:52] 2025-07-27 22:25:13,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:25:52] 2025-07-27 22:25:13,632 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 18:25:52] 2025-07-27 22:25:15,885 | INFO     | job 6747524941 has state=finished
[2025-07-27 18:25:52] 2025-07-27 22:25:15,886 | INFO     | preparing for final server update for job 6747524941 in state='finished'
[2025-07-27 18:25:52] 2025-07-27 22:25:15,886 | INFO     | this job has now completed (state=finished)
[2025-07-27 18:25:52] 2025-07-27 22:25:15,886 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 18:25:52] 2025-07-27 22:25:15,887 | INFO     | log transfer has been attempted: DONE
[2025-07-27 18:25:52] 2025-07-27 22:25:15,887 | INFO     | job 6747524941 has finished - writing final server update
[2025-07-27 18:25:52] 2025-07-27 22:25:15,887 | INFO     | total number of processed events: 400 (read)
[2025-07-27 18:25:52] 2025-07-27 22:25:15,888 | INFO     | executing command: lscpu
[2025-07-27 18:25:52] 2025-07-27 22:25:15,915 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 18:25:52] 2025-07-27 22:25:16,080 | INFO     | monitor loop #380: job 0:6747524941 is in state 'finished'
[2025-07-27 18:25:52] 2025-07-27 22:25:16,080 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:25:52] 2025-07-27 22:25:18,583 | INFO     | monitor loop #381: job 0:6747524941 is in state 'finished'
[2025-07-27 18:25:52] 2025-07-27 22:25:18,583 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:25:52] 2025-07-27 22:25:21,047 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 18:25:52] 2025-07-27 22:25:21,051 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-07-27 18:25:52] 2025-07-27 22:25:21,054 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747524941/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:25:52] 2025-07-27 22:25:21,055 | INFO     | extracted standard info from prmon json
[2025-07-27 18:25:52] 2025-07-27 22:25:21,055 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 18:25:52] 2025-07-27 22:25:21,055 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 18:25:52] 2025-07-27 22:25:21,055 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 18:25:52] 2025-07-27 22:25:21,056 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 18:25:52] 2025-07-27 22:25:21,058 | INFO     | fitting pss+swap vs Time
[2025-07-27 18:25:52] 2025-07-27 22:25:21,058 | INFO     | sum of square deviations: 130793150.0
[2025-07-27 18:25:52] 2025-07-27 22:25:21,058 | INFO     | sum of deviations: -1668255572.0000005
[2025-07-27 18:25:52] 2025-07-27 22:25:21,058 | INFO     | mean x: 1753652681.0
[2025-07-27 18:25:52] 2025-07-27 22:25:21,058 | INFO     | mean y: 2701132.2533333334
[2025-07-27 18:25:52] 2025-07-27 22:25:21,059 | INFO     | -- intersect: 22370392838.05742
[2025-07-27 18:25:52] 2025-07-27 22:25:21,059 | INFO     | intersect: 22370392838.05742
[2025-07-27 18:25:52] 2025-07-27 22:25:21,059 | INFO     | chi2: 0.0770807206443265
[2025-07-27 18:25:52] 2025-07-27 22:25:21,059 | INFO     | -- intersect: 22370392838.05742
[2025-07-27 18:25:52] 2025-07-27 22:25:21,059 | INFO     | current memory leak: -12.75 B/s (using 75 data points, chi2=0.08)
[2025-07-27 18:25:52] 2025-07-27 22:25:21,059 | INFO     | could have reported an average CPU frequency of 2043 MHz (6 samples)
[2025-07-27 18:25:52] 2025-07-27 22:25:21,060 | INFO     | ..............................
[2025-07-27 18:25:52] 2025-07-27 22:25:21,060 | INFO     | . Timing measurements:
[2025-07-27 18:25:52] 2025-07-27 22:25:21,060 | INFO     | . get job = 0 s
[2025-07-27 18:25:52] 2025-07-27 22:25:21,060 | INFO     | . initial setup = 2 s
[2025-07-27 18:25:52] 2025-07-27 22:25:21,060 | INFO     | . payload setup = 9 s
[2025-07-27 18:25:52] 2025-07-27 22:25:21,060 | INFO     | . stage-in = 0 s
[2025-07-27 18:25:52] 2025-07-27 22:25:21,060 | INFO     | . payload execution = 4992 s
[2025-07-27 18:25:52] 2025-07-27 22:25:21,060 | INFO     | . stage-out = 0 s
[2025-07-27 18:25:52] 2025-07-27 22:25:21,060 | INFO     | . log creation = 0 s
[2025-07-27 18:25:52] 2025-07-27 22:25:21,061 | INFO     | ..............................
[2025-07-27 18:25:52] 2025-07-27 22:25:21,146 | INFO     | 
[2025-07-27 18:25:52] 2025-07-27 22:25:21,146 | INFO     | job summary report
[2025-07-27 18:25:52] 2025-07-27 22:25:21,146 | INFO     | --------------------------------------------------
[2025-07-27 18:25:52] 2025-07-27 22:25:21,146 | INFO     | PanDA job id: 6747524941
[2025-07-27 18:25:52] 2025-07-27 22:25:21,147 | INFO     | task id: 45743349
[2025-07-27 18:25:52] 2025-07-27 22:25:21,147 | INFO     | errors: (none)
[2025-07-27 18:25:52] 2025-07-27 22:25:21,147 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 18:25:52] 2025-07-27 22:25:21,147 | INFO     | pilot state: finished 
[2025-07-27 18:25:52] 2025-07-27 22:25:21,147 | INFO     | transexitcode: 0
[2025-07-27 18:25:52] 2025-07-27 22:25:21,147 | INFO     | exeerrorcode: 0
[2025-07-27 18:25:52] 2025-07-27 22:25:21,147 | INFO     | exeerrordiag: 
[2025-07-27 18:25:52] 2025-07-27 22:25:21,147 | INFO     | exitcode: 0
[2025-07-27 18:25:52] 2025-07-27 22:25:21,148 | INFO     | exitmsg: OK
[2025-07-27 18:25:52] 2025-07-27 22:25:21,148 | INFO     | cpuconsumptiontime: 52912 s
[2025-07-27 18:25:52] 2025-07-27 22:25:21,148 | INFO     | nevents: 400
[2025-07-27 18:25:52] 2025-07-27 22:25:21,148 | INFO     | neventsw: 0
[2025-07-27 18:25:52] 2025-07-27 22:25:21,148 | INFO     | pid: 3719
[2025-07-27 18:25:52] 2025-07-27 22:25:21,148 | INFO     | pgrp: 3719
[2025-07-27 18:25:52] 2025-07-27 22:25:21,148 | INFO     | corecount: 12
[2025-07-27 18:25:52] 2025-07-27 22:25:21,148 | INFO     | event service: False
[2025-07-27 18:25:52] 2025-07-27 22:25:21,148 | INFO     | sizes: {0: 2397301, 1: 2397500, 5: 2397762, 11: 2397818, 5005: 2424093, 5006: 2433091, 5010: 2433275, 5017: 2433469}
[2025-07-27 18:25:52] 2025-07-27 22:25:21,148 | INFO     | --------------------------------------------------
[2025-07-27 18:25:52] 2025-07-27 22:25:21,149 | INFO     | 
[2025-07-27 18:25:52] 2025-07-27 22:25:21,149 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 18:25:52] 2025-07-27 22:25:21,173 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,173 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,174 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,174 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,174 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,174 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,175 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,175 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,175 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,175 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,175 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,175 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,176 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,176 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,176 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,176 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,176 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 18:25:52] 2025-07-27 22:25:21,176 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,177 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 18:25:52] 2025-07-27 22:25:21,177 | INFO     | job 6747524941 has completed (purged errors)
[2025-07-27 18:25:52] 2025-07-27 22:25:21,177 | INFO     | overall cleanup function is called
[2025-07-27 18:25:52] 2025-07-27 22:25:22,185 | INFO     | --- collectZombieJob: --- 10, [3719]
[2025-07-27 18:25:52] 2025-07-27 22:25:22,185 | INFO     | zombie collector waiting for pid 3719
[2025-07-27 18:25:52] 2025-07-27 22:25:22,185 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 18:25:52] 2025-07-27 22:25:22,185 | INFO     | collected zombie processes
[2025-07-27 18:25:52] 2025-07-27 22:25:22,186 | INFO     | will attempt to kill all subprocesses of pid=3719
[2025-07-27 18:25:52] 2025-07-27 22:25:22,274 | INFO     | process IDs to be killed: [3719] (in reverse order)
[2025-07-27 18:25:52] 2025-07-27 22:25:22,326 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 18:25:52] 2025-07-27 22:25:22,326 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 18:25:52] 2025-07-27 22:25:22,329 | INFO     | did not find any defunct processes belonging to 3719
[2025-07-27 18:25:52] 2025-07-27 22:25:22,332 | INFO     | did not find any defunct processes belonging to 3719
[2025-07-27 18:25:52] 2025-07-27 22:25:22,332 | INFO     | ready for new job
[2025-07-27 18:25:52] 2025-07-27 22:25:22,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 18:25:52] 2025-07-27 22:25:22,334 | INFO     | ***************************************
[2025-07-27 18:25:52] 2025-07-27 22:25:22,334 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 18:25:52] 2025-07-27 22:25:22,334 | INFO     | ***************************************
[2025-07-27 18:25:52] 2025-07-27 22:25:22,334 | INFO     | 
[2025-07-27 18:25:52] 2025-07-27 22:25:22,335 | INFO     | architecture information:
[2025-07-27 18:25:52] 2025-07-27 22:25:22,335 | INFO     | executing command: cat /etc/os-release
[2025-07-27 18:25:52] 2025-07-27 22:25:22,350 | INFO     | cat /etc/os-release:
[2025-07-27 18:25:52] NAME="CentOS Linux"
[2025-07-27 18:25:52] VERSION="7 (Core)"
[2025-07-27 18:25:52] ID="centos"
[2025-07-27 18:25:52] ID_LIKE="rhel fedora"
[2025-07-27 18:25:52] VERSION_ID="7"
[2025-07-27 18:25:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 18:25:52] ANSI_COLOR="0;31"
[2025-07-27 18:25:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 18:25:52] HOME_URL="https://www.centos.org/"
[2025-07-27 18:25:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 18:25:52] 
[2025-07-27 18:25:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 18:25:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 18:25:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 18:25:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 18:25:52] 
[2025-07-27 18:25:52] 2025-07-27 22:25:22,351 | INFO     | ***************************************
[2025-07-27 18:25:52] 2025-07-27 22:25:22,854 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 18:25:52] 2025-07-27 22:25:22,871 | INFO     | sufficient remaining disk space (29343350784 B)
[2025-07-27 18:25:52] 2025-07-27 22:25:22,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 18:25:52] 2025-07-27 22:25:22,872 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 18:25:52] 2025-07-27 22:25:22,872 | INFO     | update_server=False
[2025-07-27 18:25:52] 2025-07-27 22:25:22,872 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 18:25:52] 2025-07-27 22:25:22,872 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:25:52] 2025-07-27 22:25:22,873 | INFO     | aborting loop
[2025-07-27 18:25:52] 2025-07-27 22:25:22,873 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:25:52] 2025-07-27 22:25:23,155 | INFO     | all payload control threads have been joined
[2025-07-27 18:25:52] 2025-07-27 22:25:23,279 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 18:25:52] 2025-07-27 22:25:23,425 | INFO     | all data control threads have been joined
[2025-07-27 18:25:52] 2025-07-27 22:25:23,878 | INFO     | [job] retrieve thread has finished
[2025-07-27 18:25:52] 2025-07-27 22:25:23,878 | INFO     | [job] job monitor thread has finished
[2025-07-27 18:25:52] 2025-07-27 22:25:23,878 | INFO     | [job] queue monitor thread has finished
[2025-07-27 18:25:52] 2025-07-27 22:25:23,919 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 18:25:52] 2025-07-27 22:25:24,133 | INFO     | [data] copytool_in thread has finished
[2025-07-27 18:25:52] 2025-07-27 22:25:24,161 | INFO     | [payload] control thread has finished
[2025-07-27 18:25:52] 2025-07-27 22:25:24,224 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 18:25:52] 2025-07-27 22:25:24,261 | INFO     | all job control threads have been joined
[2025-07-27 18:25:52] 2025-07-27 22:25:24,432 | INFO     | [data] control thread has finished
[2025-07-27 18:25:52] 2025-07-27 22:25:24,734 | INFO     | [payload] validate_post thread has finished
[2025-07-27 18:25:52] 2025-07-27 22:25:24,822 | INFO     | [job] validate thread has finished
[2025-07-27 18:25:52] 2025-07-27 22:25:25,013 | INFO     | [payload] failed_post thread has finished
[2025-07-27 18:25:52] 2025-07-27 22:25:25,223 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 18:25:52] 2025-07-27 22:25:25,238 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 18:25:52] 2025-07-27 22:25:25,241 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 18:25:52] 2025-07-27 22:25:25,267 | INFO     | [job] control thread has finished
[2025-07-27 18:25:52] 2025-07-27 22:25:25,285 | INFO     | [data] copytool_out thread has finished
[2025-07-27 18:25:52] 2025-07-27 22:25:28,231 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 18:25:52] 2025-07-27 22:25:29,039 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140182460307264)>', '<ExcThread(monitor, started 140181751457536)>']
[2025-07-27 18:25:52] 2025-07-27 22:25:34,064 | INFO     | all workflow threads have been joined
[2025-07-27 18:25:52] 2025-07-27 22:25:34,065 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 18:25:52] 2025-07-27 22:25:34,066 | INFO     | traces error code: 0
[2025-07-27 18:25:52] 2025-07-27 22:25:34,066 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 18:25:52] 2025-07-27 22:25:52,513 | INFO     | PID=28556 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 18:25:52] 2025-07-27 22:25:52,514 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 18:25:52] 2025-07-27 22:25:52,514 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 18:25:52] 2025-07-27 22:25:52,514 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 18:25:52] 2025-07-27 22:25:52,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 18:25:52] 2025-07-27 22:25:52,514 | INFO     | [monitor] control thread has ended
[2025-07-27 18:25:52] 2025-07-27 22:25:52,628 [wrapper] ==== pilot stdout END ====
[2025-07-27 18:25:52] 2025-07-27 22:25:52,632 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 18:25:52] 2025-07-27 22:25:52,636 [wrapper] pilotpid: 28556
[2025-07-27 18:25:52] 2025-07-27 22:25:52,639 [wrapper] Pilot exit status: 0
[2025-07-27 18:25:52] 2025-07-27 22:25:52,655 [wrapper] pandaids: 6747524941
[2025-07-27 18:25:52] 2025-07-27 22:25:52,698 [wrapper] cleanup supervisor_pilot 20423 28557
[2025-07-27 18:25:52] 2025-07-27 22:25:52,702 [wrapper] Test setup, not cleaning
[2025-07-27 18:25:52] 2025-07-27 22:25:52,706 [wrapper] apfmon messages muted
[2025-07-27 18:25:52] 2025-07-27 22:25:52,710 [wrapper] ==== wrapper stdout END ====
[2025-07-27 18:25:52] 2025-07-27 22:25:52,713 [wrapper] ==== wrapper stderr END ====
[2025-07-27 18:25:52]  *** Error codes and diagnostics ***
[2025-07-27 18:25:52]     "exeErrorCode": 0,
[2025-07-27 18:25:52]     "exeErrorDiag": "",
[2025-07-27 18:25:52]     "pilotErrorCode": 0,
[2025-07-27 18:25:52]     "pilotErrorDiag": "",
[2025-07-27 18:25:52]  *** Listing of results directory ***
[2025-07-27 18:25:52] total 435760
[2025-07-27 18:25:52] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 11:40 queuedata.json
[2025-07-27 18:25:52] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 11:40 pilot3.tar.gz
[2025-07-27 18:25:52] -rwx------ 1 boincer umatlas     36292 Jul 27 11:41 runpilot2-wrapper.sh
[2025-07-27 18:25:52] -rw-r--r-- 1 boincer umatlas       100 Jul 27 17:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 18:25:52] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 17:01 run_atlas
[2025-07-27 18:25:52] -rw-r--r-- 1 boincer umatlas       105 Jul 27 17:01 job.xml
[2025-07-27 18:25:52] -rw-r--r-- 2 boincer umatlas 230173417 Jul 27 17:01 EVNT.45743347._002832.pool.root.1
[2025-07-27 18:25:52] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 17:01 start_atlas.sh
[2025-07-27 18:25:52] drwxrwx--x 2 boincer umatlas      4096 Jul 27 17:01 shared
[2025-07-27 18:25:52] -rw-r--r-- 2 boincer umatlas    542885 Jul 27 17:01 input.tar.gz
[2025-07-27 18:25:52] -rw-r--r-- 1 boincer umatlas         0 Jul 27 17:01 boinc_lockfile
[2025-07-27 18:25:52] -rw-r--r-- 1 boincer umatlas      2561 Jul 27 17:01 pandaJob.out
[2025-07-27 18:25:52] -rw------- 1 boincer umatlas    980109 Jul 27 17:01 agis_schedconf.cvmfs.json
[2025-07-27 18:25:52] -rw------- 1 boincer umatlas   1593052 Jul 27 17:01 agis_ddmendpoints.agis.ALL.json
[2025-07-27 18:25:52] drwx------ 4 boincer umatlas      4096 Jul 27 17:01 pilot3
[2025-07-27 18:25:52] -rw-r--r-- 1 boincer umatlas      5866 Jul 27 18:18 init_data.xml
[2025-07-27 18:25:52] -rw------- 1 boincer umatlas 210510522 Jul 27 18:24 HITS.45743349._051854.pool.root.1
[2025-07-27 18:25:52] -rw-r--r-- 1 boincer umatlas       530 Jul 27 18:24 boinc_task_state.xml
[2025-07-27 18:25:52] -rw------- 1 boincer umatlas      1049 Jul 27 18:25 memory_monitor_summary.json
[2025-07-27 18:25:52] -rw------- 1 boincer umatlas    352097 Jul 27 18:25 log.45743349._051854.job.log.tgz.1
[2025-07-27 18:25:52] -rw------- 1 boincer umatlas      7847 Jul 27 18:25 heartbeat.json
[2025-07-27 18:25:52] -rw-r--r-- 1 boincer umatlas        27 Jul 27 18:25 wrapper_checkpoint.txt
[2025-07-27 18:25:52] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 18:25 boinc_mmap_file
[2025-07-27 18:25:52] -rw------- 1 boincer umatlas        95 Jul 27 18:25 pilot_heartbeat.json
[2025-07-27 18:25:52] -rw------- 1 boincer umatlas       745 Jul 27 18:25 pilotlog.txt
[2025-07-27 18:25:52] -rw------- 1 boincer umatlas    478771 Jul 27 18:25 log.45743349._051854.job.log.1
[2025-07-27 18:25:52] -rw------- 1 boincer umatlas       357 Jul 27 18:25 output.list
[2025-07-27 18:25:52] -rw-r--r-- 1 boincer umatlas       620 Jul 27 18:25 runtime_log
[2025-07-27 18:25:52] -rw------- 1 boincer umatlas    849920 Jul 27 18:25 result.tar.gz
[2025-07-27 18:25:52] -rw------- 1 boincer umatlas       658 Jul 27 18:25 Z5FNDmegI07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwkVLDmk3obXo.diag
[2025-07-27 18:25:52] -rw-r--r-- 1 boincer umatlas      8657 Jul 27 18:25 runtime_log.err
[2025-07-27 18:25:52] -rw-r--r-- 1 boincer umatlas     21694 Jul 27 18:25 stderr.txt
[2025-07-27 18:25:52] HITS file was successfully produced:
[2025-07-27 18:25:52] -rw------- 1 boincer umatlas 210510522 Jul 27 18:24 shared/HITS.pool.root.1
[2025-07-27 18:25:52]  *** Contents of shared directory: ***
[2025-07-27 18:25:52] total 431744
[2025-07-27 18:25:52] -rw-r--r-- 2 boincer umatlas 230173417 Jul 27 17:01 ATLAS.root_0
[2025-07-27 18:25:52] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 17:01 start_atlas.sh
[2025-07-27 18:25:52] -rw-r--r-- 2 boincer umatlas    542885 Jul 27 17:01 input.tar.gz
[2025-07-27 18:25:52] -rw------- 1 boincer umatlas 210510522 Jul 27 18:24 HITS.pool.root.1
[2025-07-27 18:25:52] -rw------- 1 boincer umatlas    849920 Jul 27 18:25 result.tar.gz
18:25:54 (24955): run_atlas exited; CPU time 52882.528862
18:25:54 (24955): called boinc_finish(0)

</stderr_txt>
]]>

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