Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
12:25:17 (1362566): wrapper (7.7.26015): starting
12:25:17 (1362566): wrapper: running run_atlas (--nthreads 3)
[2025-07-28 12:25:17] Arguments: --nthreads 3
[2025-07-28 12:25:17] Threads: 3
[2025-07-28 12:25:17] Checking for CVMFS
[2025-07-28 12:25:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 12:25:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 12:25:17] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 12:25:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 12:25:17] 2.9.2.0 2836443 5374 83292 148845 2 56 21339901 36864001 0 130560 0 3920358 99.990 193620 1843 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 12:25:17] CVMFS is ok
[2025-07-28 12:25:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 12:25:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 12:25:17] Further information can be found at the LHC@home message board.
[2025-07-28 12:25:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 12:25:17] Checking for apptainer binary...
[2025-07-28 12:25:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 12:25:17] Running /usr/bin/apptainer --version
[2025-07-28 12:25:17] apptainer version 1.3.6-6.1
[2025-07-28 12:25:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 12:25:17] atlasA303
[2025-07-28 12:25:17] apptainer works
[2025-07-28 12:25:17] Set ATHENA_PROC_NUMBER=3
[2025-07-28 12:25:17] Set ATHENA_CORE_NUMBER=3
[2025-07-28 12:25:17] Starting ATLAS job with PandaID=6747524908
[2025-07-28 12:25:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 14:00:34]  *** The last 200 lines of the pilot log: ***
[2025-07-28 14:00:34]  is_tar=False
[2025-07-28 14:00:34]  lfn=log.45743349._051821.job.log.tgz.1
[2025-07-28 14:00:34]  mtime=0
[2025-07-28 14:00:34]  protocol_id=None
[2025-07-28 14:00:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 14:00:34]  replicas=None
[2025-07-28 14:00:34]  scope=mc23_13p6TeV
[2025-07-28 14:00:34]  status=None
[2025-07-28 14:00:34]  status_code=0
[2025-07-28 14:00:34]  storage_token=
[2025-07-28 14:00:34]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6747524908/log.45743349._051821.job.log.tgz.1
[2025-07-28 14:00:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/d6/log.45743349._051821.job.log.tgz.1
[2025-07-28 14:00:34]  workdir=None
[2025-07-28 14:00:34] ]
[2025-07-28 14:00:34] 2025-07-28 11:59:58,312 | INFO     | transferring file log.45743349._051821.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6747524908/log.45743349._051821.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 14:00:34] 2025-07-28 11:59:58,312 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6747524908/log.45743349._051821.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0518
[2025-07-28 14:00:34] 2025-07-28 11:59:58,327 | INFO     | adding to output.list: log.45743349._051821.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/d6/log.45743349._051821.job.log.tg
[2025-07-28 14:00:34] 2025-07-28 11:59:58,327 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 14:00:34] 2025-07-28 11:59:58,327 | INFO     | summary of transferred files:
[2025-07-28 14:00:34] 2025-07-28 11:59:58,327 | INFO     |  -- lfn=log.45743349._051821.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 14:00:34] 2025-07-28 11:59:58,327 | INFO     | stage-out finished correctly
[2025-07-28 14:00:34] 2025-07-28 11:59:59,095 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 14:00:34] 2025-07-28 12:00:00,206 | INFO     | monitor loop #437: job 0:6747524908 is in state 'finished'
[2025-07-28 14:00:34] 2025-07-28 12:00:00,207 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 14:00:34] 2025-07-28 12:00:00,985 | INFO     | job 6747524908 has state=finished
[2025-07-28 14:00:34] 2025-07-28 12:00:00,985 | INFO     | preparing for final server update for job 6747524908 in state='finished'
[2025-07-28 14:00:34] 2025-07-28 12:00:00,986 | INFO     | this job has now completed (state=finished)
[2025-07-28 14:00:34] 2025-07-28 12:00:00,986 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 14:00:34] 2025-07-28 12:00:00,986 | INFO     | log transfer has been attempted: DONE
[2025-07-28 14:00:34] 2025-07-28 12:00:00,986 | INFO     | job 6747524908 has finished - writing final server update
[2025-07-28 14:00:34] 2025-07-28 12:00:00,986 | INFO     | total number of processed events: 400 (read)
[2025-07-28 14:00:34] 2025-07-28 12:00:00,987 | INFO     | executing command: lscpu
[2025-07-28 14:00:34] 2025-07-28 12:00:01,002 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 14:00:34] 2025-07-28 12:00:02,709 | INFO     | monitor loop #438: job 0:6747524908 is in state 'finished'
[2025-07-28 14:00:34] 2025-07-28 12:00:02,709 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 14:00:34] 2025-07-28 12:00:03,459 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 14:00:34] 2025-07-28 12:00:03,460 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3781.156583333333
[2025-07-28 14:00:34] 2025-07-28 12:00:03,461 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747524908/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 14:00:34] 2025-07-28 12:00:03,462 | INFO     | extracted standard info from prmon json
[2025-07-28 14:00:34] 2025-07-28 12:00:03,462 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 14:00:34] 2025-07-28 12:00:03,462 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 14:00:34] 2025-07-28 12:00:03,462 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 14:00:34] 2025-07-28 12:00:03,462 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 14:00:34] 2025-07-28 12:00:03,463 | INFO     | fitting pss+swap vs Time
[2025-07-28 14:00:34] 2025-07-28 12:00:03,463 | INFO     | sum of square deviations: 197203697.5
[2025-07-28 14:00:34] 2025-07-28 12:00:03,463 | INFO     | sum of deviations: -14117131698.499998
[2025-07-28 14:00:34] 2025-07-28 12:00:03,463 | INFO     | mean x: 1753701241.5
[2025-07-28 14:00:34] 2025-07-28 12:00:03,463 | INFO     | mean y: 2535802.8488372094
[2025-07-28 14:00:34] 2025-07-28 12:00:03,463 | INFO     | -- intersect: 125543951607.58266
[2025-07-28 14:00:34] 2025-07-28 12:00:03,463 | INFO     | intersect: 125543951607.58266
[2025-07-28 14:00:34] 2025-07-28 12:00:03,463 | INFO     | chi2: 0.05623658647844383
[2025-07-28 14:00:34] 2025-07-28 12:00:03,463 | INFO     | -- intersect: 125543951607.58266
[2025-07-28 14:00:34] 2025-07-28 12:00:03,463 | INFO     | current memory leak: -71.59 B/s (using 86 data points, chi2=0.06)
[2025-07-28 14:00:34] 2025-07-28 12:00:03,463 | INFO     | could have reported an average CPU frequency of 3897 MHz (7 samples)
[2025-07-28 14:00:34] 2025-07-28 12:00:03,463 | INFO     | ..............................
[2025-07-28 14:00:34] 2025-07-28 12:00:03,463 | INFO     | . Timing measurements:
[2025-07-28 14:00:34] 2025-07-28 12:00:03,463 | INFO     | . get job = 0 s
[2025-07-28 14:00:34] 2025-07-28 12:00:03,463 | INFO     | . initial setup = 1 s
[2025-07-28 14:00:34] 2025-07-28 12:00:03,463 | INFO     | . payload setup = 3 s
[2025-07-28 14:00:34] 2025-07-28 12:00:03,463 | INFO     | . stage-in = 0 s
[2025-07-28 14:00:34] 2025-07-28 12:00:03,463 | INFO     | . payload execution = 5653 s
[2025-07-28 14:00:34] 2025-07-28 12:00:03,464 | INFO     | . stage-out = 0 s
[2025-07-28 14:00:34] 2025-07-28 12:00:03,464 | INFO     | . log creation = 0 s
[2025-07-28 14:00:34] 2025-07-28 12:00:03,464 | INFO     | ..............................
[2025-07-28 14:00:34] 2025-07-28 12:00:03,494 | INFO     | 
[2025-07-28 14:00:34] 2025-07-28 12:00:03,494 | INFO     | job summary report
[2025-07-28 14:00:34] 2025-07-28 12:00:03,494 | INFO     | --------------------------------------------------
[2025-07-28 14:00:34] 2025-07-28 12:00:03,494 | INFO     | PanDA job id: 6747524908
[2025-07-28 14:00:34] 2025-07-28 12:00:03,494 | INFO     | task id: 45743349
[2025-07-28 14:00:34] 2025-07-28 12:00:03,494 | INFO     | errors: (none)
[2025-07-28 14:00:34] 2025-07-28 12:00:03,495 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 14:00:34] 2025-07-28 12:00:03,495 | INFO     | pilot state: finished 
[2025-07-28 14:00:34] 2025-07-28 12:00:03,495 | INFO     | transexitcode: 0
[2025-07-28 14:00:34] 2025-07-28 12:00:03,495 | INFO     | exeerrorcode: 0
[2025-07-28 14:00:34] 2025-07-28 12:00:03,495 | INFO     | exeerrordiag: 
[2025-07-28 14:00:34] 2025-07-28 12:00:03,495 | INFO     | exitcode: 0
[2025-07-28 14:00:34] 2025-07-28 12:00:03,495 | INFO     | exitmsg: OK
[2025-07-28 14:00:34] 2025-07-28 12:00:03,495 | INFO     | cpuconsumptiontime: 16371 s
[2025-07-28 14:00:34] 2025-07-28 12:00:03,495 | INFO     | nevents: 400
[2025-07-28 14:00:34] 2025-07-28 12:00:03,495 | INFO     | neventsw: 0
[2025-07-28 14:00:34] 2025-07-28 12:00:03,495 | INFO     | pid: 1372799
[2025-07-28 14:00:34] 2025-07-28 12:00:03,495 | INFO     | pgrp: 1372799
[2025-07-28 14:00:34] 2025-07-28 12:00:03,495 | INFO     | corecount: 3
[2025-07-28 14:00:34] 2025-07-28 12:00:03,495 | INFO     | event service: False
[2025-07-28 14:00:34] 2025-07-28 12:00:03,495 | INFO     | sizes: {0: 2397478, 2: 2397740, 10: 2397768, 5660: 2424548, 5662: 2433608, 5667: 2433746}
[2025-07-28 14:00:34] 2025-07-28 12:00:03,495 | INFO     | --------------------------------------------------
[2025-07-28 14:00:34] 2025-07-28 12:00:03,495 | INFO     | 
[2025-07-28 14:00:34] 2025-07-28 12:00:03,495 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 14:00:34] 2025-07-28 12:00:03,509 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,509 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,509 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | job 6747524908 has completed (purged errors)
[2025-07-28 14:00:34] 2025-07-28 12:00:03,510 | INFO     | overall cleanup function is called
[2025-07-28 14:00:34] 2025-07-28 12:00:04,517 | INFO     | --- collectZombieJob: --- 10, [1372799]
[2025-07-28 14:00:34] 2025-07-28 12:00:04,517 | INFO     | zombie collector waiting for pid 1372799
[2025-07-28 14:00:34] 2025-07-28 12:00:04,517 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 14:00:34] 2025-07-28 12:00:04,517 | INFO     | collected zombie processes
[2025-07-28 14:00:34] 2025-07-28 12:00:04,517 | INFO     | will attempt to kill all subprocesses of pid=1372799
[2025-07-28 14:00:34] 2025-07-28 12:00:04,562 | INFO     | process IDs to be killed: [1372799] (in reverse order)
[2025-07-28 14:00:34] 2025-07-28 12:00:04,589 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 14:00:34] 2025-07-28 12:00:04,589 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 14:00:34] 2025-07-28 12:00:04,590 | INFO     | did not find any defunct processes belonging to 1372799
[2025-07-28 14:00:34] 2025-07-28 12:00:04,592 | INFO     | did not find any defunct processes belonging to 1372799
[2025-07-28 14:00:34] 2025-07-28 12:00:04,592 | INFO     | ready for new job
[2025-07-28 14:00:34] 2025-07-28 12:00:04,592 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 14:00:34] 2025-07-28 12:00:04,592 | INFO     | ***************************************
[2025-07-28 14:00:34] 2025-07-28 12:00:04,592 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 14:00:34] 2025-07-28 12:00:04,592 | INFO     | ***************************************
[2025-07-28 14:00:34] 2025-07-28 12:00:04,592 | INFO     | 
[2025-07-28 14:00:34] 2025-07-28 12:00:04,593 | INFO     | architecture information:
[2025-07-28 14:00:34] 2025-07-28 12:00:04,593 | INFO     | executing command: cat /etc/os-release
[2025-07-28 14:00:34] 2025-07-28 12:00:04,602 | INFO     | cat /etc/os-release:
[2025-07-28 14:00:34] NAME="CentOS Linux"
[2025-07-28 14:00:34] VERSION="7 (Core)"
[2025-07-28 14:00:34] ID="centos"
[2025-07-28 14:00:34] ID_LIKE="rhel fedora"
[2025-07-28 14:00:34] VERSION_ID="7"
[2025-07-28 14:00:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 14:00:34] ANSI_COLOR="0;31"
[2025-07-28 14:00:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 14:00:34] HOME_URL="https://www.centos.org/"
[2025-07-28 14:00:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 14:00:34] 
[2025-07-28 14:00:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 14:00:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 14:00:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 14:00:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 14:00:34] 
[2025-07-28 14:00:34] 2025-07-28 12:00:04,603 | INFO     | ***************************************
[2025-07-28 14:00:34] 2025-07-28 12:00:05,106 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 14:00:34] 2025-07-28 12:00:05,120 | INFO     | sufficient remaining disk space (380510404608 B)
[2025-07-28 14:00:34] 2025-07-28 12:00:05,120 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 14:00:34] 2025-07-28 12:00:05,120 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 14:00:34] 2025-07-28 12:00:05,120 | INFO     | update_server=False
[2025-07-28 14:00:34] 2025-07-28 12:00:05,120 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 14:00:34] 2025-07-28 12:00:05,120 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 14:00:34] 2025-07-28 12:00:05,132 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 14:00:34] 2025-07-28 12:00:05,213 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 14:00:34] 2025-07-28 12:00:05,213 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 14:00:34] 2025-07-28 12:00:05,213 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 14:00:34] 2025-07-28 12:00:05,213 | INFO     | will abort loop
[2025-07-28 14:00:34] 2025-07-28 12:00:05,265 | INFO     | all job control threads have been joined
[2025-07-28 14:00:34] 2025-07-28 12:00:05,357 | INFO     | all data control threads have been joined
[2025-07-28 14:00:34] 2025-07-28 12:00:05,839 | INFO     | all payload control threads have been joined
[2025-07-28 14:00:34] 2025-07-28 12:00:06,126 | INFO     | [job] queue monitor thread has finished
[2025-07-28 14:00:34] 2025-07-28 12:00:06,126 | INFO     | [job] retrieve thread has finished
[2025-07-28 14:00:34] 2025-07-28 12:00:06,219 | INFO     | [job] job monitor thread has finished
[2025-07-28 14:00:34] 2025-07-28 12:00:06,270 | INFO     | [job] control thread has finished
[2025-07-28 14:00:34] 2025-07-28 12:00:06,363 | INFO     | [data] control thread has finished
[2025-07-28 14:00:34] 2025-07-28 12:00:06,370 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 14:00:34] 2025-07-28 12:00:06,458 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 14:00:34] 2025-07-28 12:00:06,841 | INFO     | [payload] control thread has finished
[2025-07-28 14:00:34] 2025-07-28 12:00:06,984 | INFO     | [payload] failed_post thread has finished
[2025-07-28 14:00:34] 2025-07-28 12:00:07,012 | INFO     | [data] copytool_in thread has finished
[2025-07-28 14:00:34] 2025-07-28 12:00:07,358 | INFO     | [job] validate thread has finished
[2025-07-28 14:00:34] 2025-07-28 12:00:07,425 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 14:00:34] 2025-07-28 12:00:07,426 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 14:00:34] 2025-07-28 12:00:07,518 | INFO     | [payload] validate_post thread has finished
[2025-07-28 14:00:34] 2025-07-28 12:00:08,376 | INFO     | [data] copytool_out thread has finished
[2025-07-28 14:00:34] 2025-07-28 12:00:09,138 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 14:00:34] 2025-07-28 12:00:16,103 | INFO     | job.realtimelogging is not enabled
[2025-07-28 14:00:34] 2025-07-28 12:00:17,109 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 14:00:34] 2025-07-28 12:00:18,073 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140293891311424)>', '<ExcThread(monitor, started 140293395429120)>']
[2025-07-28 14:00:34] 2025-07-28 12:00:23,075 | INFO     | all workflow threads have been joined
[2025-07-28 14:00:34] 2025-07-28 12:00:23,075 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 14:00:34] 2025-07-28 12:00:23,075 | INFO     | traces error code: 0
[2025-07-28 14:00:34] 2025-07-28 12:00:23,076 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 14:00:34] 2025-07-28 12:00:34,697 | INFO     | PID=1366222 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 14:00:34] 2025-07-28 12:00:34,698 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 14:00:34] 2025-07-28 12:00:34,698 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 14:00:34] 2025-07-28 12:00:34,698 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 14:00:34] 2025-07-28 12:00:34,698 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 14:00:34] 2025-07-28 12:00:34,698 | INFO     | [monitor] control thread has ended
[2025-07-28 14:00:34] 2025-07-28 12:00:34,745 [wrapper] ==== pilot stdout END ====
[2025-07-28 14:00:34] 2025-07-28 12:00:34,748 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 14:00:34] 2025-07-28 12:00:34,751 [wrapper] pilotpid: 1366222
[2025-07-28 14:00:34] 2025-07-28 12:00:34,753 [wrapper] Pilot exit status: 0
[2025-07-28 14:00:34] 2025-07-28 12:00:34,761 [wrapper] pandaids: 6747524908
[2025-07-28 14:00:34] 2025-07-28 12:00:34,779 [wrapper] cleanup supervisor_pilot 1405785 1366223
[2025-07-28 14:00:34] 2025-07-28 12:00:34,781 [wrapper] Test setup, not cleaning
[2025-07-28 14:00:34] 2025-07-28 12:00:34,784 [wrapper] apfmon messages muted
[2025-07-28 14:00:34] 2025-07-28 12:00:34,786 [wrapper] ==== wrapper stdout END ====
[2025-07-28 14:00:34] 2025-07-28 12:00:34,789 [wrapper] ==== wrapper stderr END ====
[2025-07-28 14:00:34]  *** Error codes and diagnostics ***
[2025-07-28 14:00:34]     "exeErrorCode": 0,
[2025-07-28 14:00:34]     "exeErrorDiag": "",
[2025-07-28 14:00:34]     "pilotErrorCode": 0,
[2025-07-28 14:00:34]     "pilotErrorDiag": "",
[2025-07-28 14:00:34]  *** Listing of results directory ***
[2025-07-28 14:00:34] total 348280
[2025-07-28 14:00:34] -rw-r--r-- 1 boinc boinc      5112 Jul 27 17:40 queuedata.json
[2025-07-28 14:00:34] -rw-r--r-- 1 boinc boinc    530466 Jul 27 17:40 pilot3.tar.gz
[2025-07-28 14:00:34] -rwx------ 1 boinc boinc     36292 Jul 27 17:41 runpilot2-wrapper.sh
[2025-07-28 14:00:34] -rw-r--r-- 1 boinc boinc       100 Jul 28 12:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 14:00:34] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 12:25 run_atlas
[2025-07-28 14:00:34] -rw-r--r-- 1 boinc boinc       105 Jul 28 12:25 job.xml
[2025-07-28 14:00:34] -rw-r--r-- 2 boinc boinc 143498335 Jul 28 12:25 EVNT.45743347._002830.pool.root.1
[2025-07-28 14:00:34] -rw-r--r-- 1 boinc boinc      6932 Jul 28 12:25 init_data.xml
[2025-07-28 14:00:34] drwxrwx--x 2 boinc boinc      4096 Jul 28 12:25 shared
[2025-07-28 14:00:34] -rw-r--r-- 2 boinc boinc    542895 Jul 28 12:25 input.tar.gz
[2025-07-28 14:00:34] -rw-r--r-- 2 boinc boinc     15095 Jul 28 12:25 start_atlas.sh
[2025-07-28 14:00:34] -rw-r--r-- 1 boinc boinc         0 Jul 28 12:25 boinc_lockfile
[2025-07-28 14:00:34] -rw-r--r-- 1 boinc boinc      2563 Jul 28 12:25 pandaJob.out
[2025-07-28 14:00:34] -rw------- 1 boinc boinc    978460 Jul 28 12:25 agis_schedconf.cvmfs.json
[2025-07-28 14:00:34] -rw------- 1 boinc boinc   1593052 Jul 28 12:25 agis_ddmendpoints.agis.ALL.json
[2025-07-28 14:00:34] drwx------ 4 boinc boinc      4096 Jul 28 12:25 pilot3
[2025-07-28 14:00:34] -rw------- 1 boinc boinc 207723029 Jul 28 13:59 HITS.45743349._051821.pool.root.1
[2025-07-28 14:00:34] -rw-r--r-- 1 boinc boinc       529 Jul 28 13:59 boinc_task_state.xml
[2025-07-28 14:00:34] -rw------- 1 boinc boinc        95 Jul 28 13:59 pilot_heartbeat.json
[2025-07-28 14:00:34] -rw------- 1 boinc boinc      1014 Jul 28 13:59 memory_monitor_summary.json
[2025-07-28 14:00:34] -rw------- 1 boinc boinc    226319 Jul 28 13:59 log.45743349._051821.job.log.tgz.1
[2025-07-28 14:00:34] -rw------- 1 boinc boinc      7753 Jul 28 14:00 heartbeat.json
[2025-07-28 14:00:34] -rw-r--r-- 1 boinc boinc        27 Jul 28 14:00 wrapper_checkpoint.txt
[2025-07-28 14:00:34] -rw-r--r-- 1 boinc boinc      8192 Jul 28 14:00 boinc_mmap_file
[2025-07-28 14:00:34] -rw------- 1 boinc boinc       747 Jul 28 14:00 pilotlog.txt
[2025-07-28 14:00:34] -rw------- 1 boinc boinc    546882 Jul 28 14:00 log.45743349._051821.job.log.1
[2025-07-28 14:00:34] -rw------- 1 boinc boinc       357 Jul 28 14:00 output.list
[2025-07-28 14:00:34] -rw-r--r-- 1 boinc boinc       620 Jul 28 14:00 runtime_log
[2025-07-28 14:00:34] -rw------- 1 boinc boinc    788480 Jul 28 14:00 result.tar.gz
[2025-07-28 14:00:34] -rw-r--r-- 1 boinc boinc      8749 Jul 28 14:00 runtime_log.err
[2025-07-28 14:00:34] -rw------- 1 boinc boinc       661 Jul 28 14:00 dphMDmegI07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSkVLDmLWZQsn.diag
[2025-07-28 14:00:34] -rw-r--r-- 1 boinc boinc     21539 Jul 28 14:00 stderr.txt
[2025-07-28 14:00:34] HITS file was successfully produced:
[2025-07-28 14:00:34] -rw------- 1 boinc boinc 207723029 Jul 28 13:59 shared/HITS.pool.root.1
[2025-07-28 14:00:34]  *** Contents of shared directory: ***
[2025-07-28 14:00:34] total 344320
[2025-07-28 14:00:34] -rw-r--r-- 2 boinc boinc 143498335 Jul 28 12:25 ATLAS.root_0
[2025-07-28 14:00:34] -rw-r--r-- 2 boinc boinc    542895 Jul 28 12:25 input.tar.gz
[2025-07-28 14:00:34] -rw-r--r-- 2 boinc boinc     15095 Jul 28 12:25 start_atlas.sh
[2025-07-28 14:00:34] -rw------- 1 boinc boinc 207723029 Jul 28 13:59 HITS.pool.root.1
[2025-07-28 14:00:34] -rw------- 1 boinc boinc    788480 Jul 28 14:00 result.tar.gz
14:00:36 (1362566): run_atlas exited; CPU time 16389.720274
14:00:36 (1362566): called boinc_finish(0)

</stderr_txt>
]]>

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