Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:50:28 (163199): wrapper (7.7.26015): starting
18:50:28 (163199): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 18:50:28] Arguments: --nthreads 12
[2025-07-27 18:50:28] Threads: 12
[2025-07-27 18:50:28] Checking for CVMFS
[2025-07-27 18:50:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:50:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:50:28] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:50:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:50:29] 2.13.0.0 1889558 18987 327820 148827 1 706 28500326 40960000 9862 16776704 1 53507160 99.810 44083957 29179 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 18:50:29] CVMFS is ok
[2025-07-27 18:50:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:50:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:50:29] Further information can be found at the LHC@home message board.
[2025-07-27 18:50:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:50:29] Checking for apptainer binary...
[2025-07-27 18:50:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:50:29] Running /usr/bin/apptainer --version
[2025-07-27 18:50:29] apptainer version 1.4.1-1.el9
[2025-07-27 18:50:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:50:29] c6-5-7-1.aglt2.org
[2025-07-27 18:50:29] apptainer works
[2025-07-27 18:50:29] Set ATHENA_PROC_NUMBER=12
[2025-07-27 18:50:29] Set ATHENA_CORE_NUMBER=12
[2025-07-27 18:50:29] Starting ATLAS job with PandaID=6747411987
[2025-07-27 18:50:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:26:01]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:26:01]  replicas=None
[2025-07-27 20:26:01]  scope=mc23_13p6TeV
[2025-07-27 20:26:01]  status=None
[2025-07-27 20:26:01]  status_code=0
[2025-07-27 20:26:01]  storage_token=
[2025-07-27 20:26:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747411987/log.45743349._049120.job.log.tgz.1
[2025-07-27 20:26:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/e3/log.45743349._049120.job.log.tgz.1
[2025-07-27 20:26:01]  workdir=None
[2025-07-27 20:26:01] ]
[2025-07-27 20:26:01] 2025-07-28 00:25:21,827 | INFO     | transferring file log.45743349._049120.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747411987/log.45743349._049120.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 20:26:01] 2025-07-28 00:25:21,827 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747411987/log.45743349._049120.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._049120.job
[2025-07-27 20:26:01] 2025-07-28 00:25:21,842 | INFO     | adding to output.list: log.45743349._049120.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/e3/log.45743349._049120.job.log.tg
[2025-07-27 20:26:01] 2025-07-28 00:25:21,843 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 20:26:01] 2025-07-28 00:25:21,843 | INFO     | summary of transferred files:
[2025-07-27 20:26:01] 2025-07-28 00:25:21,843 | INFO     |  -- lfn=log.45743349._049120.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 20:26:01] 2025-07-28 00:25:21,843 | INFO     | stage-out finished correctly
[2025-07-27 20:26:01] 2025-07-28 00:25:22,423 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 20:26:01] 2025-07-28 00:25:23,620 | WARNING  | process 174893 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 20:26:01] 2025-07-28 00:25:23,620 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747411987/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:26:01] 2025-07-28 00:25:23,812 | INFO     | number of running child processes to parent process 174893: 1
[2025-07-27 20:26:01] 2025-07-28 00:25:23,812 | INFO     | maximum number of monitored processes: 6
[2025-07-27 20:26:01] 2025-07-28 00:25:25,387 | INFO     | job 6747411987 has state=finished
[2025-07-27 20:26:01] 2025-07-28 00:25:25,388 | INFO     | preparing for final server update for job 6747411987 in state='finished'
[2025-07-27 20:26:01] 2025-07-28 00:25:25,388 | INFO     | this job has now completed (state=finished)
[2025-07-27 20:26:01] 2025-07-28 00:25:25,388 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 20:26:01] 2025-07-28 00:25:25,388 | INFO     | log transfer has been attempted: DONE
[2025-07-27 20:26:01] 2025-07-28 00:25:25,389 | INFO     | job 6747411987 has finished - writing final server update
[2025-07-27 20:26:01] 2025-07-28 00:25:25,389 | INFO     | total number of processed events: 400 (read)
[2025-07-27 20:26:01] 2025-07-28 00:25:25,390 | INFO     | executing command: lscpu
[2025-07-27 20:26:01] 2025-07-28 00:25:25,448 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 20:26:01] 2025-07-28 00:25:26,315 | INFO     | monitor loop #398: job 0:6747411987 is in state 'finished'
[2025-07-27 20:26:01] 2025-07-28 00:25:26,315 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:26:01] 2025-07-28 00:25:28,818 | INFO     | monitor loop #399: job 0:6747411987 is in state 'finished'
[2025-07-27 20:26:01] 2025-07-28 00:25:28,818 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:26:01] 2025-07-28 00:25:29,230 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 20:26:01] 2025-07-28 00:25:29,237 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2815.956875
[2025-07-27 20:26:01] 2025-07-28 00:25:29,243 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747411987/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:26:01] 2025-07-28 00:25:29,244 | INFO     | extracted standard info from prmon json
[2025-07-27 20:26:01] 2025-07-28 00:25:29,244 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:26:01] 2025-07-28 00:25:29,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:26:01] 2025-07-28 00:25:29,244 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:26:01] 2025-07-28 00:25:29,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:26:01] 2025-07-28 00:25:29,246 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:26:01] 2025-07-28 00:25:29,246 | INFO     | sum of square deviations: 197207971.31395346
[2025-07-27 20:26:01] 2025-07-28 00:25:29,246 | INFO     | sum of deviations: -12439743278.197672
[2025-07-27 20:26:01] 2025-07-28 00:25:29,246 | INFO     | mean x: 1753659578.5465117
[2025-07-27 20:26:01] 2025-07-28 00:25:29,246 | INFO     | mean y: 2466916.1744186045
[2025-07-27 20:26:01] 2025-07-28 00:25:29,246 | INFO     | -- intersect: 110622107740.63943
[2025-07-27 20:26:01] 2025-07-28 00:25:29,246 | INFO     | intersect: 110622107740.63943
[2025-07-27 20:26:01] 2025-07-28 00:25:29,246 | INFO     | chi2: 0.22363627302085826
[2025-07-27 20:26:01] 2025-07-28 00:25:29,247 | INFO     | -- intersect: 110622107740.63943
[2025-07-27 20:26:01] 2025-07-28 00:25:29,247 | INFO     | current memory leak: -63.08 B/s (using 86 data points, chi2=0.22)
[2025-07-27 20:26:01] 2025-07-28 00:25:29,247 | INFO     | could have reported an average CPU frequency of 2692 MHz (7 samples)
[2025-07-27 20:26:01] 2025-07-28 00:25:29,247 | INFO     | ..............................
[2025-07-27 20:26:01] 2025-07-28 00:25:29,247 | INFO     | . Timing measurements:
[2025-07-27 20:26:01] 2025-07-28 00:25:29,247 | INFO     | . get job = 0 s
[2025-07-27 20:26:01] 2025-07-28 00:25:29,247 | INFO     | . initial setup = 2 s
[2025-07-27 20:26:01] 2025-07-28 00:25:29,247 | INFO     | . payload setup = 11 s
[2025-07-27 20:26:01] 2025-07-28 00:25:29,247 | INFO     | . stage-in = 0 s
[2025-07-27 20:26:01] 2025-07-28 00:25:29,247 | INFO     | . payload execution = 5643 s
[2025-07-27 20:26:01] 2025-07-28 00:25:29,247 | INFO     | . stage-out = 0 s
[2025-07-27 20:26:01] 2025-07-28 00:25:29,247 | INFO     | . log creation = 0 s
[2025-07-27 20:26:01] 2025-07-28 00:25:29,247 | INFO     | ..............................
[2025-07-27 20:26:01] 2025-07-28 00:25:29,336 | INFO     | 
[2025-07-27 20:26:01] 2025-07-28 00:25:29,336 | INFO     | job summary report
[2025-07-27 20:26:01] 2025-07-28 00:25:29,336 | INFO     | --------------------------------------------------
[2025-07-27 20:26:01] 2025-07-28 00:25:29,336 | INFO     | PanDA job id: 6747411987
[2025-07-27 20:26:01] 2025-07-28 00:25:29,336 | INFO     | task id: 45743349
[2025-07-27 20:26:01] 2025-07-28 00:25:29,336 | INFO     | errors: (none)
[2025-07-27 20:26:01] 2025-07-28 00:25:29,336 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:26:01] 2025-07-28 00:25:29,337 | INFO     | pilot state: finished 
[2025-07-27 20:26:01] 2025-07-28 00:25:29,337 | INFO     | transexitcode: 0
[2025-07-27 20:26:01] 2025-07-28 00:25:29,337 | INFO     | exeerrorcode: 0
[2025-07-27 20:26:01] 2025-07-28 00:25:29,337 | INFO     | exeerrordiag: 
[2025-07-27 20:26:01] 2025-07-28 00:25:29,337 | INFO     | exitcode: 0
[2025-07-27 20:26:01] 2025-07-28 00:25:29,337 | INFO     | exitmsg: OK
[2025-07-27 20:26:01] 2025-07-28 00:25:29,337 | INFO     | cpuconsumptiontime: 51137 s
[2025-07-27 20:26:01] 2025-07-28 00:25:29,337 | INFO     | nevents: 400
[2025-07-27 20:26:01] 2025-07-28 00:25:29,337 | INFO     | neventsw: 0
[2025-07-27 20:26:01] 2025-07-28 00:25:29,337 | INFO     | pid: 174893
[2025-07-27 20:26:01] 2025-07-28 00:25:29,337 | INFO     | pgrp: 174893
[2025-07-27 20:26:01] 2025-07-28 00:25:29,337 | INFO     | corecount: 12
[2025-07-27 20:26:01] 2025-07-28 00:25:29,337 | INFO     | event service: False
[2025-07-27 20:26:01] 2025-07-28 00:25:29,337 | INFO     | sizes: {0: 2397468, 1: 2397468, 6: 2397758, 11: 2397786, 5657: 2424350, 5658: 2424349, 5659: 2433587, 5666: 2433725}
[2025-07-27 20:26:01] 2025-07-28 00:25:29,337 | INFO     | --------------------------------------------------
[2025-07-27 20:26:01] 2025-07-28 00:25:29,337 | INFO     | 
[2025-07-27 20:26:01] 2025-07-28 00:25:29,338 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 20:26:01] 2025-07-28 00:25:29,355 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,355 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,355 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,355 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,356 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:26:01] 2025-07-28 00:25:29,356 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,356 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:26:01] 2025-07-28 00:25:29,356 | INFO     | job 6747411987 has completed (purged errors)
[2025-07-27 20:26:01] 2025-07-28 00:25:29,356 | INFO     | overall cleanup function is called
[2025-07-27 20:26:01] 2025-07-28 00:25:30,363 | INFO     | --- collectZombieJob: --- 10, [174893]
[2025-07-27 20:26:01] 2025-07-28 00:25:30,363 | INFO     | zombie collector waiting for pid 174893
[2025-07-27 20:26:01] 2025-07-28 00:25:30,363 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:26:01] 2025-07-28 00:25:30,363 | INFO     | collected zombie processes
[2025-07-27 20:26:01] 2025-07-28 00:25:30,364 | INFO     | will attempt to kill all subprocesses of pid=174893
[2025-07-27 20:26:01] 2025-07-28 00:25:30,678 | INFO     | process IDs to be killed: [174893] (in reverse order)
[2025-07-27 20:26:01] 2025-07-28 00:25:30,747 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:26:01] 2025-07-28 00:25:30,747 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:26:01] 2025-07-28 00:25:30,756 | INFO     | did not find any defunct processes belonging to 174893
[2025-07-27 20:26:01] 2025-07-28 00:25:30,765 | INFO     | did not find any defunct processes belonging to 174893
[2025-07-27 20:26:01] 2025-07-28 00:25:30,765 | INFO     | ready for new job
[2025-07-27 20:26:01] 2025-07-28 00:25:30,766 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:26:01] 2025-07-28 00:25:30,767 | INFO     | ***************************************
[2025-07-27 20:26:01] 2025-07-28 00:25:30,767 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:26:01] 2025-07-28 00:25:30,767 | INFO     | ***************************************
[2025-07-27 20:26:01] 2025-07-28 00:25:30,767 | INFO     | 
[2025-07-27 20:26:01] 2025-07-28 00:25:30,783 | INFO     | architecture information:
[2025-07-27 20:26:01] 2025-07-28 00:25:30,784 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:26:01] 2025-07-28 00:25:30,797 | INFO     | cat /etc/os-release:
[2025-07-27 20:26:01] NAME="CentOS Linux"
[2025-07-27 20:26:01] VERSION="7 (Core)"
[2025-07-27 20:26:01] ID="centos"
[2025-07-27 20:26:01] ID_LIKE="rhel fedora"
[2025-07-27 20:26:01] VERSION_ID="7"
[2025-07-27 20:26:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:26:01] ANSI_COLOR="0;31"
[2025-07-27 20:26:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:26:01] HOME_URL="https://www.centos.org/"
[2025-07-27 20:26:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:26:01] 
[2025-07-27 20:26:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:26:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:26:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:26:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:26:01] 
[2025-07-27 20:26:01] 2025-07-28 00:25:30,798 | INFO     | ***************************************
[2025-07-27 20:26:01] 2025-07-28 00:25:31,300 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 20:26:01] 2025-07-28 00:25:31,314 | INFO     | sufficient remaining disk space (71165804544 B)
[2025-07-27 20:26:01] 2025-07-28 00:25:31,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:26:01] 2025-07-28 00:25:31,314 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:26:01] 2025-07-28 00:25:31,314 | INFO     | update_server=False
[2025-07-27 20:26:01] 2025-07-28 00:25:31,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:26:01] 2025-07-28 00:25:31,314 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:26:01] 2025-07-28 00:25:31,321 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 20:26:01] 2025-07-28 00:25:31,321 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 20:26:01] 2025-07-28 00:25:31,321 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:26:01] 2025-07-28 00:25:31,321 | INFO     | will abort loop
[2025-07-27 20:26:01] 2025-07-28 00:25:32,008 | INFO     | all job control threads have been joined
[2025-07-27 20:26:01] 2025-07-28 00:25:32,183 | INFO     | all data control threads have been joined
[2025-07-27 20:26:01] 2025-07-28 00:25:32,319 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:26:01] 2025-07-28 00:25:32,319 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:26:01] 2025-07-28 00:25:32,326 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:26:01] 2025-07-28 00:25:32,453 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:26:01] 2025-07-28 00:25:32,662 | INFO     | [job] validate thread has finished
[2025-07-27 20:26:01] 2025-07-28 00:25:32,672 | INFO     | all payload control threads have been joined
[2025-07-27 20:26:01] 2025-07-28 00:25:32,772 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:26:01] 2025-07-28 00:25:32,874 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:26:01] 2025-07-28 00:25:32,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:26:01] 2025-07-28 00:25:33,013 | INFO     | [job] control thread has finished
[2025-07-27 20:26:01] 2025-07-28 00:25:33,163 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:26:01] 2025-07-28 00:25:33,188 | INFO     | [data] control thread has finished
[2025-07-27 20:26:01] 2025-07-28 00:25:33,467 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:26:01] 2025-07-28 00:25:33,552 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:26:01] 2025-07-28 00:25:33,566 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:26:01] 2025-07-28 00:25:33,677 | INFO     | [payload] control thread has finished
[2025-07-27 20:26:01] 2025-07-28 00:25:34,458 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:26:01] 2025-07-28 00:25:36,999 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:26:01] 2025-07-28 00:25:41,895 | INFO     | job.realtimelogging is not enabled
[2025-07-27 20:26:01] 2025-07-28 00:25:42,900 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:26:01] 2025-07-28 00:25:43,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140297372018496)>', '<ExcThread(monitor, started 140297019307776)>']
[2025-07-27 20:26:01] 2025-07-28 00:25:48,662 | INFO     | all workflow threads have been joined
[2025-07-27 20:26:01] 2025-07-28 00:25:48,662 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:26:01] 2025-07-28 00:25:48,663 | INFO     | traces error code: 0
[2025-07-27 20:26:01] 2025-07-28 00:25:48,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:26:01] 2025-07-28 00:26:01,319 | INFO     | PID=167038 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 20:26:01] 2025-07-28 00:26:01,319 | INFO     | .. there are 8 such processes running
[2025-07-27 20:26:01] 2025-07-28 00:26:01,319 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:26:01] 2025-07-28 00:26:01,319 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:26:01] 2025-07-28 00:26:01,319 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:26:01] 2025-07-28 00:26:01,319 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:26:01] 2025-07-28 00:26:01,319 | INFO     | [monitor] control thread has ended
[2025-07-27 20:26:01] 2025-07-28 00:26:01,480 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:26:01] 2025-07-28 00:26:01,483 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:26:01] 2025-07-28 00:26:01,485 [wrapper] pilotpid: 167038
[2025-07-27 20:26:01] 2025-07-28 00:26:01,487 [wrapper] Pilot exit status: 0
[2025-07-27 20:26:01] 2025-07-28 00:26:01,498 [wrapper] pandaids: 6747411987
[2025-07-27 20:26:01] 2025-07-28 00:26:01,569 [wrapper] cleanup supervisor_pilot  430296 167039
[2025-07-27 20:26:01] 2025-07-28 00:26:01,571 [wrapper] Test setup, not cleaning
[2025-07-27 20:26:01] 2025-07-28 00:26:01,574 [wrapper] apfmon messages muted
[2025-07-27 20:26:01] 2025-07-28 00:26:01,577 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:26:01] 2025-07-28 00:26:01,580 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:26:01]  *** Error codes and diagnostics ***
[2025-07-27 20:26:01]     "exeErrorCode": 0,
[2025-07-27 20:26:01]     "exeErrorDiag": "",
[2025-07-27 20:26:01]     "pilotErrorCode": 0,
[2025-07-27 20:26:01]     "pilotErrorDiag": "",
[2025-07-27 20:26:01]  *** Listing of results directory ***
[2025-07-27 20:26:01] total 434528
[2025-07-27 20:26:01] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 09:04 pilot3.tar.gz
[2025-07-27 20:26:01] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 09:25 queuedata.json
[2025-07-27 20:26:01] -rwx------. 1 boincer umatlas     36292 Jul 27 09:25 runpilot2-wrapper.sh
[2025-07-27 20:26:01] -rw-r--r--. 1 boincer umatlas       100 Jul 27 18:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:26:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 18:50 run_atlas
[2025-07-27 20:26:01] -rw-r--r--. 1 boincer umatlas       105 Jul 27 18:50 job.xml
[2025-07-27 20:26:01] -rw-r--r--. 2 boincer umatlas 227650072 Jul 27 18:50 EVNT.45743347._002716.pool.root.1
[2025-07-27 20:26:01] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:50 start_atlas.sh
[2025-07-27 20:26:01] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 18:50 shared
[2025-07-27 20:26:01] -rw-r--r--. 2 boincer umatlas    542883 Jul 27 18:50 input.tar.gz
[2025-07-27 20:26:01] -rw-r--r--. 1 boincer umatlas         0 Jul 27 18:50 boinc_lockfile
[2025-07-27 20:26:01] -rw-r--r--. 1 boincer umatlas      2559 Jul 27 18:50 pandaJob.out
[2025-07-27 20:26:01] -rw-------. 1 boincer umatlas    980109 Jul 27 18:50 agis_schedconf.cvmfs.json
[2025-07-27 20:26:01] -rw-------. 1 boincer umatlas   1593052 Jul 27 18:50 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:26:01] drwx------. 4 boincer umatlas      4096 Jul 27 18:50 pilot3
[2025-07-27 20:26:01] -rw-r--r--. 1 boincer umatlas      6839 Jul 27 20:22 init_data.xml
[2025-07-27 20:26:01] -rw-------. 1 boincer umatlas 211630097 Jul 27 20:24 HITS.45743349._049120.pool.root.1
[2025-07-27 20:26:01] -rw-r--r--. 1 boincer umatlas       529 Jul 27 20:25 boinc_task_state.xml
[2025-07-27 20:26:01] -rw-------. 1 boincer umatlas      1037 Jul 27 20:25 memory_monitor_summary.json
[2025-07-27 20:26:01] -rw-------. 1 boincer umatlas        95 Jul 27 20:25 pilot_heartbeat.json
[2025-07-27 20:26:01] -rw-------. 1 boincer umatlas    361472 Jul 27 20:25 log.45743349._049120.job.log.tgz.1
[2025-07-27 20:26:01] -rw-------. 1 boincer umatlas      7817 Jul 27 20:25 heartbeat.json
[2025-07-27 20:26:01] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 20:25 boinc_mmap_file
[2025-07-27 20:26:01] -rw-r--r--. 1 boincer umatlas        27 Jul 27 20:25 wrapper_checkpoint.txt
[2025-07-27 20:26:01] -rw-------. 1 boincer umatlas       821 Jul 27 20:26 pilotlog.txt
[2025-07-27 20:26:01] -rw-------. 1 boincer umatlas    538013 Jul 27 20:26 log.45743349._049120.job.log.1
[2025-07-27 20:26:01] -rw-------. 1 boincer umatlas       357 Jul 27 20:26 output.list
[2025-07-27 20:26:01] -rw-r--r--. 1 boincer umatlas       620 Jul 27 20:26 runtime_log
[2025-07-27 20:26:01] -rw-------. 1 boincer umatlas    921600 Jul 27 20:26 result.tar.gz
[2025-07-27 20:26:01] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 20:26 runtime_log.err
[2025-07-27 20:26:01] -rw-------. 1 boincer umatlas       653 Jul 27 20:26 drMNDmPYG07n9Rq4apOajLDm4fhM0noT9bVof3QYDmBb2KDmYtHn1n.diag
[2025-07-27 20:26:01] -rw-r--r--. 1 boincer umatlas     21882 Jul 27 20:26 stderr.txt
[2025-07-27 20:26:01] HITS file was successfully produced:
[2025-07-27 20:26:01] -rw-------. 1 boincer umatlas 211630097 Jul 27 20:24 shared/HITS.pool.root.1
[2025-07-27 20:26:01]  *** Contents of shared directory: ***
[2025-07-27 20:26:01] total 430440
[2025-07-27 20:26:01] -rw-r--r--. 2 boincer umatlas 227650072 Jul 27 18:50 ATLAS.root_0
[2025-07-27 20:26:01] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:50 start_atlas.sh
[2025-07-27 20:26:01] -rw-r--r--. 2 boincer umatlas    542883 Jul 27 18:50 input.tar.gz
[2025-07-27 20:26:01] -rw-------. 1 boincer umatlas 211630097 Jul 27 20:24 HITS.pool.root.1
[2025-07-27 20:26:01] -rw-------. 1 boincer umatlas    921600 Jul 27 20:26 result.tar.gz
20:26:03 (163199): run_atlas exited; CPU time 51228.478087
20:26:03 (163199): called boinc_finish(0)

</stderr_txt>
]]>

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