Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:11:30 (3170440): wrapper (7.7.26015): starting
17:11:30 (3170440): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 17:11:30] Arguments: --nthreads 8
[2025-07-27 17:11:30] Threads: 8
[2025-07-27 17:11:30] Checking for CVMFS
[2025-07-27 17:11:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:11:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:11:31] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:11:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:11:31] 2.13.0.0 99742 27754 362720 148823 0 325 18650027 32935937 19864 16776704 1 252767737 99.627 279349765 20314 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 17:11:31] CVMFS is ok
[2025-07-27 17:11:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:11:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:11:31] Further information can be found at the LHC@home message board.
[2025-07-27 17:11:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:11:31] Checking for apptainer binary...
[2025-07-27 17:11:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:11:31] Running /usr/bin/apptainer --version
[2025-07-27 17:11:31] apptainer version 1.4.1-1.el9
[2025-07-27 17:11:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:11:31] c7-6-31.aglt2.org
[2025-07-27 17:11:31] apptainer works
[2025-07-27 17:11:31] Set ATHENA_PROC_NUMBER=8
[2025-07-27 17:11:31] Set ATHENA_CORE_NUMBER=8
[2025-07-27 17:11:31] Starting ATLAS job with PandaID=6747500498
[2025-07-27 17:11:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 18:49:00]  *** The last 200 lines of the pilot log: ***
[2025-07-27 18:49:00]  scope=mc23_13p6TeV
[2025-07-27 18:49:00]  status=None
[2025-07-27 18:49:00]  status_code=0
[2025-07-27 18:49:00]  storage_token=
[2025-07-27 18:49:00]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747500498/log.45743349._051704.job.log.tgz.1
[2025-07-27 18:49:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/ec/log.45743349._051704.job.log.tgz.1
[2025-07-27 18:49:00]  workdir=None
[2025-07-27 18:49:00] ]
[2025-07-27 18:49:00] 2025-07-27 22:48:19,866 | INFO     | transferring file log.45743349._051704.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747500498/log.45743349._051704.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 18:49:00] 2025-07-27 22:48:19,866 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747500498/log.45743349._051704.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._051704.job
[2025-07-27 18:49:00] 2025-07-27 22:48:19,893 | INFO     | adding to output.list: log.45743349._051704.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/ec/log.45743349._051704.job.log.tg
[2025-07-27 18:49:00] 2025-07-27 22:48:19,893 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 18:49:00] 2025-07-27 22:48:19,894 | INFO     | summary of transferred files:
[2025-07-27 18:49:00] 2025-07-27 22:48:19,894 | INFO     |  -- lfn=log.45743349._051704.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 18:49:00] 2025-07-27 22:48:19,894 | INFO     | stage-out finished correctly
[2025-07-27 18:49:00] 2025-07-27 22:48:20,850 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 18:49:00] 2025-07-27 22:48:21,468 | WARNING  | process 3189404 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 18:49:00] 2025-07-27 22:48:21,468 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747500498/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:49:00] 2025-07-27 22:48:21,933 | INFO     | number of running child processes to parent process 3189404: 1
[2025-07-27 18:49:00] 2025-07-27 22:48:21,933 | INFO     | maximum number of monitored processes: 6
[2025-07-27 18:49:00] 2025-07-27 22:48:22,304 | INFO     | job 6747500498 has state=finished
[2025-07-27 18:49:00] 2025-07-27 22:48:22,305 | INFO     | preparing for final server update for job 6747500498 in state='finished'
[2025-07-27 18:49:00] 2025-07-27 22:48:22,375 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-27 18:49:00] 2025-07-27 22:48:22,375 | INFO     | this job has now completed (state=finished)
[2025-07-27 18:49:00] 2025-07-27 22:48:22,376 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 18:49:00] 2025-07-27 22:48:22,376 | INFO     | log transfer has been attempted: DONE
[2025-07-27 18:49:00] 2025-07-27 22:48:22,376 | INFO     | job 6747500498 has finished - writing final server update
[2025-07-27 18:49:00] 2025-07-27 22:48:22,376 | INFO     | total number of processed events: 400 (read)
[2025-07-27 18:49:00] 2025-07-27 22:48:22,377 | INFO     | executing command: lscpu
[2025-07-27 18:49:00] 2025-07-27 22:48:22,450 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 18:49:00] 2025-07-27 22:48:24,437 | INFO     | monitor loop #407: job 0:6747500498 is in state 'finished'
[2025-07-27 18:49:00] 2025-07-27 22:48:24,438 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:49:00] 2025-07-27 22:48:25,873 | INFO     | PID=3178373 has CPU usage=15.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 18:49:00] 2025-07-27 22:48:25,873 | INFO     | .. there are 25 such processes running
[2025-07-27 18:49:00] 2025-07-27 22:48:26,943 | INFO     | monitor loop #408: job 0:6747500498 is in state 'finished'
[2025-07-27 18:49:00] 2025-07-27 22:48:26,943 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:49:00] 2025-07-27 22:48:28,197 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 18:49:00] 2025-07-27 22:48:28,211 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3183.566114583334
[2025-07-27 18:49:00] 2025-07-27 22:48:28,226 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747500498/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:49:00] 2025-07-27 22:48:28,227 | INFO     | extracted standard info from prmon json
[2025-07-27 18:49:00] 2025-07-27 22:48:28,227 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 18:49:00] 2025-07-27 22:48:28,227 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 18:49:00] 2025-07-27 22:48:28,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 18:49:00] 2025-07-27 22:48:28,227 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 18:49:00] 2025-07-27 22:48:28,229 | INFO     | fitting pss+swap vs Time
[2025-07-27 18:49:00] 2025-07-27 22:48:28,229 | INFO     | sum of square deviations: 211285822.0
[2025-07-27 18:49:00] 2025-07-27 22:48:28,229 | INFO     | sum of deviations: -490785351.4999998
[2025-07-27 18:49:00] 2025-07-27 22:48:28,230 | INFO     | mean x: 1753653711.5
[2025-07-27 18:49:00] 2025-07-27 22:48:28,230 | INFO     | mean y: 2217866.647727273
[2025-07-27 18:49:00] 2025-07-27 22:48:28,230 | INFO     | -- intersect: 4075693053.2970557
[2025-07-27 18:49:00] 2025-07-27 22:48:28,230 | INFO     | intersect: 4075693053.2970557
[2025-07-27 18:49:00] 2025-07-27 22:48:28,230 | INFO     | chi2: 0.03834388813728357
[2025-07-27 18:49:00] 2025-07-27 22:48:28,230 | INFO     | -- intersect: 4075693053.2970557
[2025-07-27 18:49:00] 2025-07-27 22:48:28,230 | INFO     | current memory leak: -2.32 B/s (using 88 data points, chi2=0.04)
[2025-07-27 18:49:00] 2025-07-27 22:48:28,231 | INFO     | could have reported an average CPU frequency of 3201 MHz (7 samples)
[2025-07-27 18:49:00] 2025-07-27 22:48:28,231 | INFO     | ..............................
[2025-07-27 18:49:00] 2025-07-27 22:48:28,231 | INFO     | . Timing measurements:
[2025-07-27 18:49:00] 2025-07-27 22:48:28,231 | INFO     | . get job = 0 s
[2025-07-27 18:49:00] 2025-07-27 22:48:28,231 | INFO     | . initial setup = 3 s
[2025-07-27 18:49:00] 2025-07-27 22:48:28,231 | INFO     | . payload setup = 12 s
[2025-07-27 18:49:00] 2025-07-27 22:48:28,231 | INFO     | . stage-in = 0 s
[2025-07-27 18:49:00] 2025-07-27 22:48:28,231 | INFO     | . payload execution = 5751 s
[2025-07-27 18:49:00] 2025-07-27 22:48:28,231 | INFO     | . stage-out = 0 s
[2025-07-27 18:49:00] 2025-07-27 22:48:28,231 | INFO     | . log creation = 0 s
[2025-07-27 18:49:00] 2025-07-27 22:48:28,231 | INFO     | ..............................
[2025-07-27 18:49:00] 2025-07-27 22:48:28,310 | INFO     | 
[2025-07-27 18:49:00] 2025-07-27 22:48:28,310 | INFO     | job summary report
[2025-07-27 18:49:00] 2025-07-27 22:48:28,310 | INFO     | --------------------------------------------------
[2025-07-27 18:49:00] 2025-07-27 22:48:28,311 | INFO     | PanDA job id: 6747500498
[2025-07-27 18:49:00] 2025-07-27 22:48:28,311 | INFO     | task id: 45743349
[2025-07-27 18:49:00] 2025-07-27 22:48:28,311 | INFO     | errors: (none)
[2025-07-27 18:49:00] 2025-07-27 22:48:28,311 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 18:49:00] 2025-07-27 22:48:28,311 | INFO     | pilot state: finished 
[2025-07-27 18:49:00] 2025-07-27 22:48:28,311 | INFO     | transexitcode: 0
[2025-07-27 18:49:00] 2025-07-27 22:48:28,311 | INFO     | exeerrorcode: 0
[2025-07-27 18:49:00] 2025-07-27 22:48:28,311 | INFO     | exeerrordiag: 
[2025-07-27 18:49:00] 2025-07-27 22:48:28,311 | INFO     | exitcode: 0
[2025-07-27 18:49:00] 2025-07-27 22:48:28,311 | INFO     | exitmsg: OK
[2025-07-27 18:49:00] 2025-07-27 22:48:28,311 | INFO     | cpuconsumptiontime: 37492 s
[2025-07-27 18:49:00] 2025-07-27 22:48:28,311 | INFO     | nevents: 400
[2025-07-27 18:49:00] 2025-07-27 22:48:28,311 | INFO     | neventsw: 0
[2025-07-27 18:49:00] 2025-07-27 22:48:28,311 | INFO     | pid: 3189404
[2025-07-27 18:49:00] 2025-07-27 22:48:28,311 | INFO     | pgrp: 3189404
[2025-07-27 18:49:00] 2025-07-27 22:48:28,312 | INFO     | corecount: 8
[2025-07-27 18:49:00] 2025-07-27 22:48:28,312 | INFO     | event service: False
[2025-07-27 18:49:00] 2025-07-27 22:48:28,312 | INFO     | sizes: {0: 2397475, 8: 2397737, 11: 2397765, 5767: 2424478, 5768: 2424477, 5769: 2433531, 5770: 2433715, 5777: 2433909}
[2025-07-27 18:49:00] 2025-07-27 22:48:28,312 | INFO     | --------------------------------------------------
[2025-07-27 18:49:00] 2025-07-27 22:48:28,312 | INFO     | 
[2025-07-27 18:49:00] 2025-07-27 22:48:28,312 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 18:49:00] 2025-07-27 22:48:28,344 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,344 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,344 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,345 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,345 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,345 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,345 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,345 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,345 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,345 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,345 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,345 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,345 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,345 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,345 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,346 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,346 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,346 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 18:49:00] 2025-07-27 22:48:28,346 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,346 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 18:49:00] 2025-07-27 22:48:28,346 | INFO     | job 6747500498 has completed (purged errors)
[2025-07-27 18:49:00] 2025-07-27 22:48:28,346 | INFO     | overall cleanup function is called
[2025-07-27 18:49:00] 2025-07-27 22:48:29,356 | INFO     | --- collectZombieJob: --- 10, [3189404]
[2025-07-27 18:49:00] 2025-07-27 22:48:29,357 | INFO     | zombie collector waiting for pid 3189404
[2025-07-27 18:49:00] 2025-07-27 22:48:29,357 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 18:49:00] 2025-07-27 22:48:29,357 | INFO     | collected zombie processes
[2025-07-27 18:49:00] 2025-07-27 22:48:29,357 | INFO     | will attempt to kill all subprocesses of pid=3189404
[2025-07-27 18:49:00] 2025-07-27 22:48:29,877 | INFO     | process IDs to be killed: [3189404] (in reverse order)
[2025-07-27 18:49:00] 2025-07-27 22:48:30,052 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 18:49:00] 2025-07-27 22:48:30,052 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 18:49:00] 2025-07-27 22:48:30,073 | INFO     | did not find any defunct processes belonging to 3189404
[2025-07-27 18:49:00] 2025-07-27 22:48:30,096 | INFO     | did not find any defunct processes belonging to 3189404
[2025-07-27 18:49:00] 2025-07-27 22:48:30,096 | INFO     | ready for new job
[2025-07-27 18:49:00] 2025-07-27 22:48:30,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 18:49:00] 2025-07-27 22:48:30,099 | INFO     | ***************************************
[2025-07-27 18:49:00] 2025-07-27 22:48:30,099 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 18:49:00] 2025-07-27 22:48:30,099 | INFO     | ***************************************
[2025-07-27 18:49:00] 2025-07-27 22:48:30,099 | INFO     | 
[2025-07-27 18:49:00] 2025-07-27 22:48:30,104 | INFO     | architecture information:
[2025-07-27 18:49:00] 2025-07-27 22:48:30,105 | INFO     | executing command: cat /etc/os-release
[2025-07-27 18:49:00] 2025-07-27 22:48:30,128 | INFO     | cat /etc/os-release:
[2025-07-27 18:49:00] NAME="CentOS Linux"
[2025-07-27 18:49:00] VERSION="7 (Core)"
[2025-07-27 18:49:00] ID="centos"
[2025-07-27 18:49:00] ID_LIKE="rhel fedora"
[2025-07-27 18:49:00] VERSION_ID="7"
[2025-07-27 18:49:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 18:49:00] ANSI_COLOR="0;31"
[2025-07-27 18:49:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 18:49:00] HOME_URL="https://www.centos.org/"
[2025-07-27 18:49:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 18:49:00] 
[2025-07-27 18:49:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 18:49:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 18:49:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 18:49:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 18:49:00] 
[2025-07-27 18:49:00] 2025-07-27 22:48:30,128 | INFO     | ***************************************
[2025-07-27 18:49:00] 2025-07-27 22:48:30,631 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 18:49:00] 2025-07-27 22:48:30,650 | INFO     | sufficient remaining disk space (75485937664 B)
[2025-07-27 18:49:00] 2025-07-27 22:48:30,650 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 18:49:00] 2025-07-27 22:48:30,650 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 18:49:00] 2025-07-27 22:48:30,650 | INFO     | update_server=False
[2025-07-27 18:49:00] 2025-07-27 22:48:30,651 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 18:49:00] 2025-07-27 22:48:30,651 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:49:00] 2025-07-27 22:48:30,652 | INFO     | aborting loop
[2025-07-27 18:49:00] 2025-07-27 22:48:30,652 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 18:49:00] 2025-07-27 22:48:31,425 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 18:49:00] 2025-07-27 22:48:31,531 | INFO     | all data control threads have been joined
[2025-07-27 18:49:00] 2025-07-27 22:48:31,656 | INFO     | [job] retrieve thread has finished
[2025-07-27 18:49:00] 2025-07-27 22:48:31,658 | INFO     | [job] job monitor thread has finished
[2025-07-27 18:49:00] 2025-07-27 22:48:31,816 | INFO     | [data] copytool_in thread has finished
[2025-07-27 18:49:00] 2025-07-27 22:48:31,856 | INFO     | [payload] failed_post thread has finished
[2025-07-27 18:49:00] 2025-07-27 22:48:31,882 | INFO     | all job control threads have been joined
[2025-07-27 18:49:00] 2025-07-27 22:48:31,995 | INFO     | all payload control threads have been joined
[2025-07-27 18:49:00] 2025-07-27 22:48:32,068 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 18:49:00] 2025-07-27 22:48:32,537 | INFO     | [data] control thread has finished
[2025-07-27 18:49:00] 2025-07-27 22:48:32,601 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 18:49:00] 2025-07-27 22:48:32,658 | INFO     | [data] copytool_out thread has finished
[2025-07-27 18:49:00] 2025-07-27 22:48:32,887 | INFO     | [job] control thread has finished
[2025-07-27 18:49:00] 2025-07-27 22:48:32,928 | INFO     | [payload] validate_post thread has finished
[2025-07-27 18:49:00] 2025-07-27 22:48:32,987 | INFO     | [job] validate thread has finished
[2025-07-27 18:49:00] 2025-07-27 22:48:33,000 | INFO     | [payload] control thread has finished
[2025-07-27 18:49:00] 2025-07-27 22:48:33,087 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 18:49:00] 2025-07-27 22:48:33,321 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:49:00] 2025-07-27 22:48:34,327 | INFO     | [job] queue monitor thread has finished
[2025-07-27 18:49:00] 2025-07-27 22:48:35,431 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 18:49:00] 2025-07-27 22:48:41,214 | INFO     | job.realtimelogging is not enabled
[2025-07-27 18:49:00] 2025-07-27 22:48:42,225 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 18:49:00] 2025-07-27 22:48:43,883 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139792277497664)>', '<ExcThread(monitor, started 139791614060288)>']
[2025-07-27 18:49:00] 2025-07-27 22:48:48,908 | INFO     | all workflow threads have been joined
[2025-07-27 18:49:00] 2025-07-27 22:48:48,908 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 18:49:00] 2025-07-27 22:48:48,908 | INFO     | traces error code: 0
[2025-07-27 18:49:00] 2025-07-27 22:48:48,909 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 18:49:00] 2025-07-27 22:49:00,495 | INFO     | PID=3178373 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 18:49:00] 2025-07-27 22:49:00,496 | INFO     | .. there are 25 such processes running
[2025-07-27 18:49:00] 2025-07-27 22:49:00,496 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 18:49:00] 2025-07-27 22:49:00,497 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 18:49:00] 2025-07-27 22:49:00,497 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 18:49:00] 2025-07-27 22:49:00,497 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 18:49:00] 2025-07-27 22:49:00,497 | INFO     | [monitor] control thread has ended
[2025-07-27 18:49:00] 2025-07-27 22:49:00,696 [wrapper] ==== pilot stdout END ====
[2025-07-27 18:49:00] 2025-07-27 22:49:00,702 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 18:49:00] 2025-07-27 22:49:00,707 [wrapper] pilotpid: 3178373
[2025-07-27 18:49:00] 2025-07-27 22:49:00,711 [wrapper] Pilot exit status: 0
[2025-07-27 18:49:00] 2025-07-27 22:49:00,731 [wrapper] pandaids: 6747500498
[2025-07-27 18:49:00] 2025-07-27 22:49:00,859 [wrapper] cleanup supervisor_pilot 3978403 3178374
[2025-07-27 18:49:00] 2025-07-27 22:49:00,863 [wrapper] Test setup, not cleaning
[2025-07-27 18:49:00] 2025-07-27 22:49:00,867 [wrapper] apfmon messages muted
[2025-07-27 18:49:00] 2025-07-27 22:49:00,873 [wrapper] ==== wrapper stdout END ====
[2025-07-27 18:49:00] 2025-07-27 22:49:00,878 [wrapper] ==== wrapper stderr END ====
[2025-07-27 18:49:00]  *** Error codes and diagnostics ***
[2025-07-27 18:49:00]     "exeErrorCode": 0,
[2025-07-27 18:49:00]     "exeErrorDiag": "",
[2025-07-27 18:49:00]     "pilotErrorCode": 0,
[2025-07-27 18:49:00]     "pilotErrorDiag": "",
[2025-07-27 18:49:00]  *** Listing of results directory ***
[2025-07-27 18:49:00] total 440416
[2025-07-27 18:49:00] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 10:53 pilot3.tar.gz
[2025-07-27 18:49:00] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 11:35 queuedata.json
[2025-07-27 18:49:00] -rwx------. 1 boincer umatlas     36292 Jul 27 11:36 runpilot2-wrapper.sh
[2025-07-27 18:49:00] -rw-r--r--. 1 boincer umatlas       100 Jul 27 17:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 18:49:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 17:11 run_atlas
[2025-07-27 18:49:00] -rw-r--r--. 1 boincer umatlas       105 Jul 27 17:11 job.xml
[2025-07-27 18:49:00] -rw-r--r--. 2 boincer umatlas 231200448 Jul 27 17:11 EVNT.45743347._002765.pool.root.1
[2025-07-27 18:49:00] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:11 start_atlas.sh
[2025-07-27 18:49:00] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 17:11 shared
[2025-07-27 18:49:00] -rw-r--r--. 2 boincer umatlas    542891 Jul 27 17:11 input.tar.gz
[2025-07-27 18:49:00] -rw-r--r--. 1 boincer umatlas         0 Jul 27 17:11 boinc_lockfile
[2025-07-27 18:49:00] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 17:11 pandaJob.out
[2025-07-27 18:49:00] -rw-------. 1 boincer umatlas    980109 Jul 27 17:11 agis_schedconf.cvmfs.json
[2025-07-27 18:49:00] -rw-------. 1 boincer umatlas   1593052 Jul 27 17:11 agis_ddmendpoints.agis.ALL.json
[2025-07-27 18:49:00] drwx------. 4 boincer umatlas      4096 Jul 27 17:11 pilot3
[2025-07-27 18:49:00] -rw-r--r--. 1 boincer umatlas      6932 Jul 27 18:40 init_data.xml
[2025-07-27 18:49:00] -rw-------. 1 boincer umatlas 214194249 Jul 27 18:47 HITS.45743349._051704.pool.root.1
[2025-07-27 18:49:00] -rw-r--r--. 1 boincer umatlas       529 Jul 27 18:47 boinc_task_state.xml
[2025-07-27 18:49:00] -rw-------. 1 boincer umatlas      1031 Jul 27 18:48 memory_monitor_summary.json
[2025-07-27 18:49:00] -rw-------. 1 boincer umatlas    310674 Jul 27 18:48 log.45743349._051704.job.log.tgz.1
[2025-07-27 18:49:00] -rw-------. 1 boincer umatlas        95 Jul 27 18:48 pilot_heartbeat.json
[2025-07-27 18:49:00] -rw-------. 1 boincer umatlas      7768 Jul 27 18:48 heartbeat.json
[2025-07-27 18:49:00] -rw-r--r--. 1 boincer umatlas        27 Jul 27 18:48 wrapper_checkpoint.txt
[2025-07-27 18:49:00] -rw-------. 1 boincer umatlas       823 Jul 27 18:49 pilotlog.txt
[2025-07-27 18:49:00] -rw-------. 1 boincer umatlas    546497 Jul 27 18:49 log.45743349._051704.job.log.1
[2025-07-27 18:49:00] -rw-------. 1 boincer umatlas       357 Jul 27 18:49 output.list
[2025-07-27 18:49:00] -rw-r--r--. 1 boincer umatlas       620 Jul 27 18:49 runtime_log
[2025-07-27 18:49:00] -rw-------. 1 boincer umatlas    880640 Jul 27 18:49 result.tar.gz
[2025-07-27 18:49:00] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 18:49 runtime_log.err
[2025-07-27 18:49:00] -rw-------. 1 boincer umatlas       652 Jul 27 18:49 lxiLDmbbI07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdjVLDmzk7QHm.diag
[2025-07-27 18:49:00] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 18:49 boinc_mmap_file
[2025-07-27 18:49:00] -rw-r--r--. 1 boincer umatlas     22059 Jul 27 18:49 stderr.txt
[2025-07-27 18:49:01] HITS file was successfully produced:
[2025-07-27 18:49:01] -rw-------. 1 boincer umatlas 214194249 Jul 27 18:47 shared/HITS.pool.root.1
[2025-07-27 18:49:01]  *** Contents of shared directory: ***
[2025-07-27 18:49:01] total 436372
[2025-07-27 18:49:01] -rw-r--r--. 2 boincer umatlas 231200448 Jul 27 17:11 ATLAS.root_0
[2025-07-27 18:49:01] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:11 start_atlas.sh
[2025-07-27 18:49:01] -rw-r--r--. 2 boincer umatlas    542891 Jul 27 17:11 input.tar.gz
[2025-07-27 18:49:01] -rw-------. 1 boincer umatlas 214194249 Jul 27 18:47 HITS.pool.root.1
[2025-07-27 18:49:01] -rw-------. 1 boincer umatlas    880640 Jul 27 18:49 result.tar.gz
18:49:03 (3170440): run_atlas exited; CPU time 37709.206248
18:49:03 (3170440): called boinc_finish(0)

</stderr_txt>
]]>

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