Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:44:55 (2249946): wrapper (7.7.26015): starting
16:44:55 (2249946): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 16:44:55] Arguments: --nthreads 10
[2025-07-27 16:44:55] Threads: 10
[2025-07-27 16:44:55] Checking for CVMFS
[2025-07-27 16:44:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 16:44:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 16:44:55] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 16:44:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 16:44:55] 2.12.6.0 1588522 18877 468480 148823 2 682 28186404 32935937 21791 16776704 1 102434832 99.621 112211897 17839 http://cvmfs-s1.hpc.swin.edu.au:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 16:44:55] CVMFS is ok
[2025-07-27 16:44:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 16:44:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 16:44:56] Further information can be found at the LHC@home message board.
[2025-07-27 16:44:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 16:44:56] Checking for apptainer binary...
[2025-07-27 16:44:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 16:44:56] Running /usr/bin/apptainer --version
[2025-07-27 16:44:56] apptainer version 1.4.1-1.el9
[2025-07-27 16:44:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 16:44:56] c-3-40.aglt2.org
[2025-07-27 16:44:56] apptainer works
[2025-07-27 16:44:56] Set ATHENA_PROC_NUMBER=10
[2025-07-27 16:44:56] Set ATHENA_CORE_NUMBER=10
[2025-07-27 16:44:56] Starting ATLAS job with PandaID=6747500521
[2025-07-27 16:44:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:22:41]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:22:41] 2025-07-27 23:22:04,451 | INFO     | PID=2253778 has CPU usage=15.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 19:22:41] 2025-07-27 23:22:04,451 | INFO     | .. there are 29 such processes running
[2025-07-27 19:22:41] 2025-07-27 23:22:06,452 | INFO     | monitor loop #643: job 0:6747500521 is in state 'finished'
[2025-07-27 19:22:41] 2025-07-27 23:22:06,452 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:22:41] 2025-07-27 23:22:07,544 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 19:22:41] 2025-07-27 23:22:07,569 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2694.5355499999996
[2025-07-27 19:22:41] 2025-07-27 23:22:07,582 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747500521/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:22:41] 2025-07-27 23:22:07,583 | INFO     | extracted standard info from prmon json
[2025-07-27 19:22:41] 2025-07-27 23:22:07,583 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:22:41] 2025-07-27 23:22:07,583 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:22:41] 2025-07-27 23:22:07,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:22:41] 2025-07-27 23:22:07,584 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:22:41] 2025-07-27 23:22:07,586 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:22:41] 2025-07-27 23:22:07,587 | INFO     | sum of square deviations: 1132447160.4415545
[2025-07-27 19:22:41] 2025-07-27 23:22:07,588 | INFO     | sum of deviations: 11283049323.207787
[2025-07-27 19:22:41] 2025-07-27 23:22:07,588 | INFO     | mean x: 1753653809.5194805
[2025-07-27 19:22:41] 2025-07-27 23:22:07,588 | INFO     | mean y: 2211070.0974025973
[2025-07-27 19:22:41] 2025-07-27 23:22:07,588 | INFO     | -- intersect: -17470182450.607365
[2025-07-27 19:22:41] 2025-07-27 23:22:07,588 | INFO     | intersect: -17470182450.607365
[2025-07-27 19:22:41] 2025-07-27 23:22:07,588 | INFO     | chi2: 1.7644064718269927
[2025-07-27 19:22:41] 2025-07-27 23:22:07,588 | INFO     | sum of square deviations: 1025683282.939598
[2025-07-27 19:22:41] 2025-07-27 23:22:07,589 | INFO     | sum of deviations: 12561764181.315437
[2025-07-27 19:22:41] 2025-07-27 23:22:07,589 | INFO     | mean x: 1753653657.0201342
[2025-07-27 19:22:41] 2025-07-27 23:22:07,589 | INFO     | mean y: 2212856.2281879196
[2025-07-27 19:22:41] 2025-07-27 23:22:07,589 | INFO     | -- intersect: -21475161360.16101
[2025-07-27 19:22:41] 2025-07-27 23:22:07,590 | INFO     | intersect: -21475161360.16101
[2025-07-27 19:22:41] 2025-07-27 23:22:07,590 | INFO     | chi2: 1.7555379391209944
[2025-07-27 19:22:41] 2025-07-27 23:22:07,590 | INFO     | current chi2=1.7555379391209944 (change=0.5026354668046069 %)
[2025-07-27 19:22:41] 2025-07-27 23:22:07,590 | INFO     | right removable region: 148
[2025-07-27 19:22:41] 2025-07-27 23:22:07,590 | INFO     | sum of square deviations: 1025681452.939598
[2025-07-27 19:22:41] 2025-07-27 23:22:07,591 | INFO     | sum of deviations: -13414577571.140942
[2025-07-27 19:22:41] 2025-07-27 23:22:07,591 | INFO     | mean x: 1753653962.0201342
[2025-07-27 19:22:41] 2025-07-27 23:22:07,591 | INFO     | mean y: 2246001.046979866
[2025-07-27 19:22:41] 2025-07-27 23:22:07,591 | INFO     | -- intersect: 22937755889.654755
[2025-07-27 19:22:41] 2025-07-27 23:22:07,591 | INFO     | intersect: 22937755889.654755
[2025-07-27 19:22:41] 2025-07-27 23:22:07,591 | INFO     | chi2: 0.12439182796144337
[2025-07-27 19:22:41] 2025-07-27 23:22:07,591 | INFO     | current chi2=0.12439182796144337 (change=92.9499335925333 %)
[2025-07-27 19:22:41] 2025-07-27 23:22:07,592 | INFO     | sum of square deviations: 925846107.9375019
[2025-07-27 19:22:41] 2025-07-27 23:22:07,592 | INFO     | sum of deviations: -13160412618.708338
[2025-07-27 19:22:41] 2025-07-27 23:22:07,593 | INFO     | mean x: 1753654114.5208333
[2025-07-27 19:22:41] 2025-07-27 23:22:07,593 | INFO     | mean y: 2245521.902777778
[2025-07-27 19:22:41] 2025-07-27 23:22:07,593 | INFO     | -- intersect: 24929511014.22332
[2025-07-27 19:22:41] 2025-07-27 23:22:07,593 | INFO     | intersect: 24929511014.22332
[2025-07-27 19:22:41] 2025-07-27 23:22:07,593 | INFO     | chi2: 0.09920429383928102
[2025-07-27 19:22:41] 2025-07-27 23:22:07,593 | INFO     | current chi2=0.09920429383928102 (change=20.24854408439878 %)
[2025-07-27 19:22:41] 2025-07-27 23:22:07,593 | INFO     | left removable region: 20
[2025-07-27 19:22:41] 2025-07-27 23:22:07,593 | INFO     | sum of square deviations: 650247313.96875
[2025-07-27 19:22:41] 2025-07-27 23:22:07,594 | INFO     | sum of deviations: -5554900979.609375
[2025-07-27 19:22:41] 2025-07-27 23:22:07,594 | INFO     | mean x: 1753654236.515625
[2025-07-27 19:22:41] 2025-07-27 23:22:07,594 | INFO     | mean y: 2238548.5546875
[2025-07-27 19:22:41] 2025-07-27 23:22:07,594 | INFO     | -- intersect: 14983270268.410332
[2025-07-27 19:22:41] 2025-07-27 23:22:07,594 | INFO     | intersect: 14983270268.410332
[2025-07-27 19:22:41] 2025-07-27 23:22:07,594 | INFO     | chi2: 0.0734834316295926
[2025-07-27 19:22:41] 2025-07-27 23:22:07,595 | INFO     | -- intersect: 14983270268.410332
[2025-07-27 19:22:41] 2025-07-27 23:22:07,595 | INFO     | current memory leak: -8.54 B/s (using 128 data points, chi2=0.07)
[2025-07-27 19:22:41] 2025-07-27 23:22:07,595 | INFO     | could have reported an average CPU frequency of 2641 MHz (9 samples)
[2025-07-27 19:22:41] 2025-07-27 23:22:07,595 | INFO     | ..............................
[2025-07-27 19:22:41] 2025-07-27 23:22:07,595 | INFO     | . Timing measurements:
[2025-07-27 19:22:41] 2025-07-27 23:22:07,595 | INFO     | . get job = 0 s
[2025-07-27 19:22:41] 2025-07-27 23:22:07,596 | INFO     | . initial setup = 2 s
[2025-07-27 19:22:41] 2025-07-27 23:22:07,596 | INFO     | . payload setup = 9 s
[2025-07-27 19:22:41] 2025-07-27 23:22:07,596 | INFO     | . stage-in = 0 s
[2025-07-27 19:22:41] 2025-07-27 23:22:07,596 | INFO     | . payload execution = 9377 s
[2025-07-27 19:22:41] 2025-07-27 23:22:07,596 | INFO     | . stage-out = 0 s
[2025-07-27 19:22:41] 2025-07-27 23:22:07,596 | INFO     | . log creation = 0 s
[2025-07-27 19:22:41] 2025-07-27 23:22:07,596 | INFO     | ..............................
[2025-07-27 19:22:41] 2025-07-27 23:22:07,762 | INFO     | 
[2025-07-27 19:22:41] 2025-07-27 23:22:07,763 | INFO     | job summary report
[2025-07-27 19:22:41] 2025-07-27 23:22:07,763 | INFO     | --------------------------------------------------
[2025-07-27 19:22:41] 2025-07-27 23:22:07,763 | INFO     | PanDA job id: 6747500521
[2025-07-27 19:22:41] 2025-07-27 23:22:07,763 | INFO     | task id: 45743349
[2025-07-27 19:22:41] 2025-07-27 23:22:07,764 | INFO     | errors: (none)
[2025-07-27 19:22:41] 2025-07-27 23:22:07,764 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:22:41] 2025-07-27 23:22:07,764 | INFO     | pilot state: finished 
[2025-07-27 19:22:41] 2025-07-27 23:22:07,764 | INFO     | transexitcode: 0
[2025-07-27 19:22:41] 2025-07-27 23:22:07,764 | INFO     | exeerrorcode: 0
[2025-07-27 19:22:41] 2025-07-27 23:22:07,764 | INFO     | exeerrordiag: 
[2025-07-27 19:22:41] 2025-07-27 23:22:07,764 | INFO     | exitcode: 0
[2025-07-27 19:22:41] 2025-07-27 23:22:07,764 | INFO     | exitmsg: OK
[2025-07-27 19:22:41] 2025-07-27 23:22:07,764 | INFO     | cpuconsumptiontime: 49569 s
[2025-07-27 19:22:41] 2025-07-27 23:22:07,764 | INFO     | nevents: 400
[2025-07-27 19:22:41] 2025-07-27 23:22:07,764 | INFO     | neventsw: 0
[2025-07-27 19:22:41] 2025-07-27 23:22:07,764 | INFO     | pid: 2265721
[2025-07-27 19:22:41] 2025-07-27 23:22:07,764 | INFO     | pgrp: 2265721
[2025-07-27 19:22:41] 2025-07-27 23:22:07,764 | INFO     | corecount: 10
[2025-07-27 19:22:41] 2025-07-27 23:22:07,764 | INFO     | event service: False
[2025-07-27 19:22:41] 2025-07-27 23:22:07,764 | INFO     | sizes: {0: 2397303, 1: 2397502, 6: 2397764, 11: 2397792, 9390: 2426327, 9392: 2435509, 9401: 2435711}
[2025-07-27 19:22:41] 2025-07-27 23:22:07,765 | INFO     | --------------------------------------------------
[2025-07-27 19:22:41] 2025-07-27 23:22:07,765 | INFO     | 
[2025-07-27 19:22:41] 2025-07-27 23:22:07,765 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 19:22:41] 2025-07-27 23:22:07,788 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,789 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,789 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,789 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,789 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,789 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,789 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,790 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,790 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,790 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,790 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:22:41] 2025-07-27 23:22:07,790 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,790 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:22:41] 2025-07-27 23:22:07,790 | INFO     | job 6747500521 has completed (purged errors)
[2025-07-27 19:22:41] 2025-07-27 23:22:07,790 | INFO     | overall cleanup function is called
[2025-07-27 19:22:41] 2025-07-27 23:22:08,797 | INFO     | --- collectZombieJob: --- 10, [2265721]
[2025-07-27 19:22:41] 2025-07-27 23:22:08,797 | INFO     | zombie collector waiting for pid 2265721
[2025-07-27 19:22:41] 2025-07-27 23:22:08,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:22:41] 2025-07-27 23:22:08,798 | INFO     | collected zombie processes
[2025-07-27 19:22:41] 2025-07-27 23:22:08,798 | INFO     | will attempt to kill all subprocesses of pid=2265721
[2025-07-27 19:22:41] 2025-07-27 23:22:09,288 | INFO     | process IDs to be killed: [2265721] (in reverse order)
[2025-07-27 19:22:41] 2025-07-27 23:22:09,464 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:22:41] 2025-07-27 23:22:09,465 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:22:41] 2025-07-27 23:22:09,487 | INFO     | did not find any defunct processes belonging to 2265721
[2025-07-27 19:22:41] 2025-07-27 23:22:09,510 | INFO     | did not find any defunct processes belonging to 2265721
[2025-07-27 19:22:41] 2025-07-27 23:22:09,511 | INFO     | ready for new job
[2025-07-27 19:22:41] 2025-07-27 23:22:09,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:22:41] 2025-07-27 23:22:09,513 | INFO     | ***************************************
[2025-07-27 19:22:41] 2025-07-27 23:22:09,513 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:22:41] 2025-07-27 23:22:09,513 | INFO     | ***************************************
[2025-07-27 19:22:41] 2025-07-27 23:22:09,513 | INFO     | 
[2025-07-27 19:22:41] 2025-07-27 23:22:09,531 | INFO     | architecture information:
[2025-07-27 19:22:41] 2025-07-27 23:22:09,535 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:22:41] 2025-07-27 23:22:09,558 | INFO     | cat /etc/os-release:
[2025-07-27 19:22:41] NAME="CentOS Linux"
[2025-07-27 19:22:41] VERSION="7 (Core)"
[2025-07-27 19:22:41] ID="centos"
[2025-07-27 19:22:41] ID_LIKE="rhel fedora"
[2025-07-27 19:22:41] VERSION_ID="7"
[2025-07-27 19:22:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:22:41] ANSI_COLOR="0;31"
[2025-07-27 19:22:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:22:41] HOME_URL="https://www.centos.org/"
[2025-07-27 19:22:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:22:41] 
[2025-07-27 19:22:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:22:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:22:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:22:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:22:41] 
[2025-07-27 19:22:41] 2025-07-27 23:22:09,559 | INFO     | ***************************************
[2025-07-27 19:22:41] 2025-07-27 23:22:10,077 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 19:22:41] 2025-07-27 23:22:10,099 | INFO     | sufficient remaining disk space (75913756672 B)
[2025-07-27 19:22:41] 2025-07-27 23:22:10,100 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:22:41] 2025-07-27 23:22:10,100 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:22:41] 2025-07-27 23:22:10,100 | INFO     | update_server=False
[2025-07-27 19:22:41] 2025-07-27 23:22:10,100 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:22:41] 2025-07-27 23:22:10,101 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:22:41] 2025-07-27 23:22:10,102 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:22:41] 2025-07-27 23:22:10,102 | INFO     | aborting loop
[2025-07-27 19:22:41] 2025-07-27 23:22:10,304 | INFO     | all data control threads have been joined
[2025-07-27 19:22:41] 2025-07-27 23:22:11,106 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:22:41] 2025-07-27 23:22:11,107 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:22:41] 2025-07-27 23:22:11,130 | INFO     | all payload control threads have been joined
[2025-07-27 19:22:41] 2025-07-27 23:22:11,204 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:22:41] 2025-07-27 23:22:11,310 | INFO     | [data] control thread has finished
[2025-07-27 19:22:41] 2025-07-27 23:22:11,381 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:22:41] 2025-07-27 23:22:11,513 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:22:41] 2025-07-27 23:22:11,523 | INFO     | all job control threads have been joined
[2025-07-27 19:22:41] 2025-07-27 23:22:11,545 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:22:41] 2025-07-27 23:22:11,721 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:22:41] 2025-07-27 23:22:12,117 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:22:41] 2025-07-27 23:22:12,136 | INFO     | [payload] control thread has finished
[2025-07-27 19:22:41] 2025-07-27 23:22:12,268 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:22:41] 2025-07-27 23:22:12,372 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:22:41] 2025-07-27 23:22:12,498 | INFO     | [job] validate thread has finished
[2025-07-27 19:22:41] 2025-07-27 23:22:12,528 | INFO     | [job] control thread has finished
[2025-07-27 19:22:41] 2025-07-27 23:22:12,700 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:22:41] 2025-07-27 23:22:13,552 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:22:41] 2025-07-27 23:22:13,705 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:22:41] 2025-07-27 23:22:14,110 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:22:41] 2025-07-27 23:22:14,119 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140030610130752)>', '<ExcThread(monitor, started 140030253180672)>']
[2025-07-27 19:22:41] 2025-07-27 23:22:19,145 | INFO     | all workflow threads have been joined
[2025-07-27 19:22:41] 2025-07-27 23:22:19,145 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:22:41] 2025-07-27 23:22:19,145 | INFO     | traces error code: 0
[2025-07-27 19:22:41] 2025-07-27 23:22:19,146 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:22:41] 2025-07-27 23:22:41,047 | INFO     | PID=2253778 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:22:41] 2025-07-27 23:22:41,047 | INFO     | .. there are 29 such processes running
[2025-07-27 19:22:41] 2025-07-27 23:22:41,048 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:22:41] 2025-07-27 23:22:41,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:22:41] 2025-07-27 23:22:41,048 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:22:41] 2025-07-27 23:22:41,048 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:22:41] 2025-07-27 23:22:41,048 | INFO     | [monitor] control thread has ended
[2025-07-27 19:22:41] 2025-07-27 23:22:41,203 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:22:41] 2025-07-27 23:22:41,208 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:22:41] 2025-07-27 23:22:41,211 [wrapper] pilotpid: 2253778
[2025-07-27 19:22:41] 2025-07-27 23:22:41,217 [wrapper] Pilot exit status: 0
[2025-07-27 19:22:41] 2025-07-27 23:22:41,243 [wrapper] pandaids: 6747500521
[2025-07-27 19:22:41] 2025-07-27 23:22:41,339 [wrapper] cleanup supervisor_pilot 3021283 2253779
[2025-07-27 19:22:41] 2025-07-27 23:22:41,343 [wrapper] Test setup, not cleaning
[2025-07-27 19:22:41] 2025-07-27 23:22:41,348 [wrapper] apfmon messages muted
[2025-07-27 19:22:41] 2025-07-27 23:22:41,354 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:22:41] 2025-07-27 23:22:41,359 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:22:41]  *** Error codes and diagnostics ***
[2025-07-27 19:22:41]     "exeErrorCode": 0,
[2025-07-27 19:22:41]     "exeErrorDiag": "",
[2025-07-27 19:22:41]     "pilotErrorCode": 0,
[2025-07-27 19:22:41]     "pilotErrorDiag": "",
[2025-07-27 19:22:41]  *** Listing of results directory ***
[2025-07-27 19:22:41] total 438452
[2025-07-27 19:22:41] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 10:53 pilot3.tar.gz
[2025-07-27 19:22:41] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 11:35 queuedata.json
[2025-07-27 19:22:41] -rwx------. 1 boincer umatlas     36292 Jul 27 11:36 runpilot2-wrapper.sh
[2025-07-27 19:22:41] -rw-r--r--. 1 boincer umatlas       100 Jul 27 16:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:22:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 16:44 run_atlas
[2025-07-27 19:22:41] -rw-r--r--. 1 boincer umatlas       105 Jul 27 16:44 job.xml
[2025-07-27 19:22:41] -rw-r--r--. 2 boincer umatlas 233723361 Jul 27 16:44 EVNT.45743347._002766.pool.root.1
[2025-07-27 19:22:41] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 16:44 start_atlas.sh
[2025-07-27 19:22:41] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 16:44 shared
[2025-07-27 19:22:41] -rw-r--r--. 2 boincer umatlas    542889 Jul 27 16:44 input.tar.gz
[2025-07-27 19:22:41] -rw-r--r--. 1 boincer umatlas         0 Jul 27 16:44 boinc_lockfile
[2025-07-27 19:22:41] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 16:44 pandaJob.out
[2025-07-27 19:22:41] -rw-------. 1 boincer umatlas    980109 Jul 27 16:45 agis_schedconf.cvmfs.json
[2025-07-27 19:22:41] -rw-------. 1 boincer umatlas   1593052 Jul 27 16:45 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:22:41] drwx------. 4 boincer umatlas      4096 Jul 27 16:45 pilot3
[2025-07-27 19:22:41] -rw-r--r--. 1 boincer umatlas      6840 Jul 27 19:13 init_data.xml
[2025-07-27 19:22:41] -rw-------. 1 boincer umatlas 208910800 Jul 27 19:21 HITS.45743349._051727.pool.root.1
[2025-07-27 19:22:41] -rw-r--r--. 1 boincer umatlas       530 Jul 27 19:21 boinc_task_state.xml
[2025-07-27 19:22:41] -rw-------. 1 boincer umatlas      1038 Jul 27 19:21 memory_monitor_summary.json
[2025-07-27 19:22:41] -rw-------. 1 boincer umatlas    373081 Jul 27 19:21 log.45743349._051727.job.log.tgz.1
[2025-07-27 19:22:41] -rw-------. 1 boincer umatlas      7814 Jul 27 19:22 heartbeat.json
[2025-07-27 19:22:41] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:22 boinc_mmap_file
[2025-07-27 19:22:41] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:22 wrapper_checkpoint.txt
[2025-07-27 19:22:41] -rw-------. 1 boincer umatlas        95 Jul 27 19:22 pilot_heartbeat.json
[2025-07-27 19:22:41] -rw-------. 1 boincer umatlas       823 Jul 27 19:22 pilotlog.txt
[2025-07-27 19:22:41] -rw-------. 1 boincer umatlas    859385 Jul 27 19:22 log.45743349._051727.job.log.1
[2025-07-27 19:22:41] -rw-------. 1 boincer umatlas       357 Jul 27 19:22 output.list
[2025-07-27 19:22:41] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:22 runtime_log
[2025-07-27 19:22:41] -rw-------. 1 boincer umatlas   1249280 Jul 27 19:22 result.tar.gz
[2025-07-27 19:22:41] -rw-------. 1 boincer umatlas       650 Jul 27 19:22 XpyKDmYbI07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEiVLDmVvUZXo.diag
[2025-07-27 19:22:41] -rw-r--r--. 1 boincer umatlas      8652 Jul 27 19:22 runtime_log.err
[2025-07-27 19:22:41] -rw-r--r--. 1 boincer umatlas     21295 Jul 27 19:22 stderr.txt
[2025-07-27 19:22:41] HITS file was successfully produced:
[2025-07-27 19:22:41] -rw-------. 1 boincer umatlas 208910800 Jul 27 19:21 shared/HITS.pool.root.1
[2025-07-27 19:22:41]  *** Contents of shared directory: ***
[2025-07-27 19:22:41] total 434040
[2025-07-27 19:22:41] -rw-r--r--. 2 boincer umatlas 233723361 Jul 27 16:44 ATLAS.root_0
[2025-07-27 19:22:41] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 16:44 start_atlas.sh
[2025-07-27 19:22:41] -rw-r--r--. 2 boincer umatlas    542889 Jul 27 16:44 input.tar.gz
[2025-07-27 19:22:41] -rw-------. 1 boincer umatlas 208910800 Jul 27 19:21 HITS.pool.root.1
[2025-07-27 19:22:41] -rw-------. 1 boincer umatlas   1249280 Jul 27 19:22 result.tar.gz
19:22:43 (2249946): run_atlas exited; CPU time 49899.277047
19:22:43 (2249946): called boinc_finish(0)

</stderr_txt>
]]>

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