Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:02:50 (778363): wrapper (7.7.26015): starting
12:02:50 (778363): wrapper: running run_atlas (--nthreads 6)
[2025-07-28 12:02:50] Arguments: --nthreads 6
[2025-07-28 12:02:50] Threads: 6
[2025-07-28 12:02:50] Checking for CVMFS
[2025-07-28 12:02:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 12:02:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 12:02:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 12:02:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 12:02:51] 2.11.5.0 2646 1228 70384 148832 3 60 29535140 52428801 101 130560 0 2130518 99.996 39673 13 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-07-28 12:02:51] CVMFS is ok
[2025-07-28 12:02:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 12:02:51] Checking for apptainer binary...
[2025-07-28 12:02:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 12:02:51] Running /usr/bin/apptainer --version
[2025-07-28 12:02:51] apptainer version 1.3.6-1.el9
[2025-07-28 12:02:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 12:02:51] testio002
[2025-07-28 12:02:51] apptainer works
[2025-07-28 12:02:51] Set ATHENA_PROC_NUMBER=6
[2025-07-28 12:02:51] Set ATHENA_CORE_NUMBER=6
[2025-07-28 12:02:51] Starting ATLAS job with PandaID=6747411590
[2025-07-28 12:02:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 13:13:10]  *** The last 200 lines of the pilot log: ***
[2025-07-28 13:13:10]  guid=e24febd7-226f-4741-a9fd-ba658d2e68bc
[2025-07-28 13:13:10]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-28 13:13:10]  is_altstaged=None
[2025-07-28 13:13:10]  is_tar=False
[2025-07-28 13:13:10]  lfn=log.45743349._048804.job.log.tgz.1
[2025-07-28 13:13:10]  mtime=0
[2025-07-28 13:13:10]  protocol_id=None
[2025-07-28 13:13:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 13:13:10]  replicas=None
[2025-07-28 13:13:10]  scope=mc23_13p6TeV
[2025-07-28 13:13:10]  status=None
[2025-07-28 13:13:10]  status_code=0
[2025-07-28 13:13:10]  storage_token=
[2025-07-28 13:13:10]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6747411590/log.45743349._048804.job.log.tgz.1
[2025-07-28 13:13:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/f5/log.45743349._048804.job.log.tgz.1
[2025-07-28 13:13:10]  workdir=None
[2025-07-28 13:13:10] ]
[2025-07-28 13:13:10] 2025-07-28 04:12:50,669 | INFO     | transferring file log.45743349._048804.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6747411590/log.45743349._048804.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 13:13:10] 2025-07-28 04:12:50,670 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6747411590/log.45743349._048804.job.log.tgz.1 /var/lib/boinc/slots/2/log.45743349._048804.job
[2025-07-28 13:13:10] 2025-07-28 04:12:50,676 | INFO     | adding to output.list: log.45743349._048804.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/f5/log.45743349._048804.job.log.tg
[2025-07-28 13:13:10] 2025-07-28 04:12:50,677 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 13:13:10] 2025-07-28 04:12:50,677 | INFO     | summary of transferred files:
[2025-07-28 13:13:10] 2025-07-28 04:12:50,677 | INFO     |  -- lfn=log.45743349._048804.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 13:13:10] 2025-07-28 04:12:50,677 | INFO     | stage-out finished correctly
[2025-07-28 13:13:10] 2025-07-28 04:12:54,146 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 13:13:10] 2025-07-28 04:12:55,236 | WARNING  | process 799704 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 13:13:10] 2025-07-28 04:12:55,236 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6747411590/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 13:13:10] 2025-07-28 04:12:55,264 | INFO     | number of running child processes to parent process 799704: 1
[2025-07-28 13:13:10] 2025-07-28 04:12:55,264 | INFO     | maximum number of monitored processes: 6
[2025-07-28 13:13:10] 2025-07-28 04:12:55,670 | INFO     | job 6747411590 has state=finished
[2025-07-28 13:13:10] 2025-07-28 04:12:55,670 | INFO     | preparing for final server update for job 6747411590 in state='finished'
[2025-07-28 13:13:10] 2025-07-28 04:12:55,671 | INFO     | this job has now completed (state=finished)
[2025-07-28 13:13:10] 2025-07-28 04:12:55,671 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 13:13:10] 2025-07-28 04:12:55,671 | INFO     | log transfer has been attempted: DONE
[2025-07-28 13:13:10] 2025-07-28 04:12:55,672 | INFO     | job 6747411590 has finished - writing final server update
[2025-07-28 13:13:10] 2025-07-28 04:12:55,672 | INFO     | total number of processed events: 400 (read)
[2025-07-28 13:13:10] 2025-07-28 04:12:55,673 | INFO     | executing command: lscpu
[2025-07-28 13:13:10] 2025-07-28 04:12:55,693 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 13:13:10] 2025-07-28 04:12:56,599 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 13:13:10] 2025-07-28 04:12:56,600 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4458.5793125
[2025-07-28 13:13:10] 2025-07-28 04:12:56,601 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6747411590/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 13:13:10] 2025-07-28 04:12:56,601 | INFO     | extracted standard info from prmon json
[2025-07-28 13:13:10] 2025-07-28 04:12:56,601 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 13:13:10] 2025-07-28 04:12:56,601 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 13:13:10] 2025-07-28 04:12:56,601 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 13:13:10] 2025-07-28 04:12:56,601 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | fitting pss+swap vs Time
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | sum of square deviations: 73882315.5
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | sum of deviations: 13027329915.500002
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | mean x: 1753673957.5
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | mean y: 2389810.306451613
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | -- intersect: -309214897898.72626
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | intersect: -309214897898.72626
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | chi2: 1.6748023901174602
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | -- intersect: -309214897898.72626
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | current memory leak: 176.33 B/s (using 62 data points, chi2=1.67)
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | could have reported an average CPU frequency of 4339 MHz (6 samples)
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | ..............................
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | . Timing measurements:
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | . get job = 0 s
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | . initial setup = 3 s
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | . payload setup = 1 s
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | . stage-in = 0 s
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | . payload execution = 4176 s
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | . stage-out = 0 s
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | . log creation = 0 s
[2025-07-28 13:13:10] 2025-07-28 04:12:56,602 | INFO     | ..............................
[2025-07-28 13:13:10] 2025-07-28 04:12:56,628 | INFO     | 
[2025-07-28 13:13:10] 2025-07-28 04:12:56,628 | INFO     | job summary report
[2025-07-28 13:13:10] 2025-07-28 04:12:56,628 | INFO     | --------------------------------------------------
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | PanDA job id: 6747411590
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | task id: 45743349
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | errors: (none)
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | pilot state: finished 
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | transexitcode: 0
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | exeerrorcode: 0
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | exeerrordiag: 
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | exitcode: 0
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | exitmsg: OK
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | cpuconsumptiontime: 20903 s
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | nevents: 400
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | neventsw: 0
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | pid: 799704
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | pgrp: 799704
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | corecount: 6
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | event service: False
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | sizes: {0: 2397475, 1: 2397737, 11: 2397765, 4180: 2423741, 4181: 2432739, 4185: 2432795, 4187: 2433117}
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | --------------------------------------------------
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | 
[2025-07-28 13:13:10] 2025-07-28 04:12:56,629 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-07-28 13:13:10] 2025-07-28 04:12:56,636 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,636 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,636 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,636 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,636 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,636 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,636 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,636 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,636 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,636 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,636 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,636 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,636 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,637 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,637 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,637 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,637 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,637 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 13:13:10] 2025-07-28 04:12:56,637 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,637 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 13:13:10] 2025-07-28 04:12:56,637 | INFO     | job 6747411590 has completed (purged errors)
[2025-07-28 13:13:10] 2025-07-28 04:12:56,637 | INFO     | overall cleanup function is called
[2025-07-28 13:13:10] 2025-07-28 04:12:57,642 | INFO     | --- collectZombieJob: --- 10, [799704]
[2025-07-28 13:13:10] 2025-07-28 04:12:57,643 | INFO     | zombie collector waiting for pid 799704
[2025-07-28 13:13:10] 2025-07-28 04:12:57,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 13:13:10] 2025-07-28 04:12:57,643 | INFO     | collected zombie processes
[2025-07-28 13:13:10] 2025-07-28 04:12:57,643 | INFO     | will attempt to kill all subprocesses of pid=799704
[2025-07-28 13:13:10] 2025-07-28 04:12:57,675 | INFO     | process IDs to be killed: [799704] (in reverse order)
[2025-07-28 13:13:10] 2025-07-28 04:12:57,689 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 13:13:10] 2025-07-28 04:12:57,689 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 13:13:10] 2025-07-28 04:12:57,690 | INFO     | did not find any defunct processes belonging to 799704
[2025-07-28 13:13:10] 2025-07-28 04:12:57,691 | INFO     | did not find any defunct processes belonging to 799704
[2025-07-28 13:13:10] 2025-07-28 04:12:57,691 | INFO     | ready for new job
[2025-07-28 13:13:10] 2025-07-28 04:12:57,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 13:13:10] 2025-07-28 04:12:57,691 | INFO     | ***************************************
[2025-07-28 13:13:10] 2025-07-28 04:12:57,691 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 13:13:10] 2025-07-28 04:12:57,691 | INFO     | ***************************************
[2025-07-28 13:13:10] 2025-07-28 04:12:57,691 | INFO     | 
[2025-07-28 13:13:10] 2025-07-28 04:12:57,691 | INFO     | architecture information:
[2025-07-28 13:13:10] 2025-07-28 04:12:57,691 | INFO     | executing command: cat /etc/os-release
[2025-07-28 13:13:10] 2025-07-28 04:12:57,695 | INFO     | cat /etc/os-release:
[2025-07-28 13:13:10] NAME="CentOS Linux"
[2025-07-28 13:13:10] VERSION="7 (Core)"
[2025-07-28 13:13:10] ID="centos"
[2025-07-28 13:13:10] ID_LIKE="rhel fedora"
[2025-07-28 13:13:10] VERSION_ID="7"
[2025-07-28 13:13:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 13:13:10] ANSI_COLOR="0;31"
[2025-07-28 13:13:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 13:13:10] HOME_URL="https://www.centos.org/"
[2025-07-28 13:13:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 13:13:10] 
[2025-07-28 13:13:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 13:13:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 13:13:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 13:13:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 13:13:10] 
[2025-07-28 13:13:10] 2025-07-28 04:12:57,696 | INFO     | ***************************************
[2025-07-28 13:13:10] 2025-07-28 04:12:58,198 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-07-28 13:13:10] 2025-07-28 04:12:58,217 | INFO     | sufficient remaining disk space (315006910464 B)
[2025-07-28 13:13:10] 2025-07-28 04:12:58,218 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 13:13:10] 2025-07-28 04:12:58,218 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 13:13:10] 2025-07-28 04:12:58,218 | INFO     | update_server=False
[2025-07-28 13:13:10] 2025-07-28 04:12:58,218 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 13:13:10] 2025-07-28 04:12:58,219 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 13:13:10] 2025-07-28 04:12:58,219 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 13:13:10] 2025-07-28 04:12:58,220 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 13:13:10] 2025-07-28 04:12:58,220 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 13:13:10] 2025-07-28 04:12:58,220 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 13:13:10] 2025-07-28 04:12:58,491 | INFO     | all payload control threads have been joined
[2025-07-28 13:13:10] 2025-07-28 04:12:58,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 13:13:10] 2025-07-28 04:12:58,772 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 13:13:10] 2025-07-28 04:12:58,772 | INFO     | aborting loop
[2025-07-28 13:13:10] 2025-07-28 04:12:59,221 | INFO     | [job] retrieve thread has finished
[2025-07-28 13:13:10] 2025-07-28 04:12:59,225 | INFO     | [job] queue monitor thread has finished
[2025-07-28 13:13:10] 2025-07-28 04:12:59,247 | INFO     | all data control threads have been joined
[2025-07-28 13:13:10] 2025-07-28 04:12:59,494 | INFO     | all job control threads have been joined
[2025-07-28 13:13:10] 2025-07-28 04:12:59,496 | INFO     | [payload] control thread has finished
[2025-07-28 13:13:10] 2025-07-28 04:12:59,553 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 13:13:10] 2025-07-28 04:12:59,557 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 13:13:10] 2025-07-28 04:12:59,778 | INFO     | [job] job monitor thread has finished
[2025-07-28 13:13:10] 2025-07-28 04:13:00,180 | INFO     | [payload] validate_post thread has finished
[2025-07-28 13:13:10] 2025-07-28 04:13:00,181 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 13:13:10] 2025-07-28 04:13:00,253 | INFO     | [data] control thread has finished
[2025-07-28 13:13:10] 2025-07-28 04:13:00,330 | INFO     | [job] validate thread has finished
[2025-07-28 13:13:10] 2025-07-28 04:13:00,332 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 13:13:10] 2025-07-28 04:13:00,340 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 13:13:10] 2025-07-28 04:13:00,369 | INFO     | [data] copytool_in thread has finished
[2025-07-28 13:13:10] 2025-07-28 04:13:00,499 | INFO     | [job] control thread has finished
[2025-07-28 13:13:10] 2025-07-28 04:13:00,622 | INFO     | [payload] failed_post thread has finished
[2025-07-28 13:13:10] 2025-07-28 04:13:00,719 | INFO     | [data] copytool_out thread has finished
[2025-07-28 13:13:10] 2025-07-28 04:13:04,187 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 13:13:10] 2025-07-28 04:13:05,740 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140271069763392)>', '<ExcThread(monitor, started 140270561629952)>']
[2025-07-28 13:13:10] 2025-07-28 04:13:06,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 13:13:10] 2025-07-28 04:13:06,261 | INFO     | [monitor] control thread has ended
[2025-07-28 13:13:10] 2025-07-28 04:13:10,766 | INFO     | all workflow threads have been joined
[2025-07-28 13:13:10] 2025-07-28 04:13:10,766 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 13:13:10] 2025-07-28 04:13:10,767 | INFO     | traces error code: 0
[2025-07-28 13:13:10] 2025-07-28 04:13:10,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 13:13:10] 2025-07-28 04:13:10,803 [wrapper] ==== pilot stdout END ====
[2025-07-28 13:13:10] 2025-07-28 04:13:10,805 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 13:13:10] 2025-07-28 04:13:10,805 [wrapper] pilotpid: 782106
[2025-07-28 13:13:10] 2025-07-28 04:13:10,806 [wrapper] Pilot exit status: 0
[2025-07-28 13:13:10] 2025-07-28 04:13:10,809 [wrapper] pandaids: 6747411590
[2025-07-28 13:13:10] 2025-07-28 04:13:10,815 [wrapper] cleanup supervisor_pilot  811089 782107
[2025-07-28 13:13:10] 2025-07-28 04:13:10,816 [wrapper] Test setup, not cleaning
[2025-07-28 13:13:10] 2025-07-28 04:13:10,817 [wrapper] apfmon messages muted
[2025-07-28 13:13:10] 2025-07-28 04:13:10,817 [wrapper] ==== wrapper stdout END ====
[2025-07-28 13:13:10] 2025-07-28 04:13:10,818 [wrapper] ==== wrapper stderr END ====
[2025-07-28 13:13:10]  *** Error codes and diagnostics ***
[2025-07-28 13:13:10]     "exeErrorCode": 0,
[2025-07-28 13:13:10]     "exeErrorDiag": "",
[2025-07-28 13:13:10]     "pilotErrorCode": 0,
[2025-07-28 13:13:10]     "pilotErrorDiag": "",
[2025-07-28 13:13:10]  *** Listing of results directory ***
[2025-07-28 13:13:10] total 434500
[2025-07-28 13:13:10] -rw-r--r--. 1 boinc boinc    530466 Jul 27 22:04 pilot3.tar.gz
[2025-07-28 13:13:10] -rw-r--r--. 1 boinc boinc      5112 Jul 27 22:09 queuedata.json
[2025-07-28 13:13:10] -rwx------. 1 boinc boinc     36292 Jul 27 22:11 runpilot2-wrapper.sh
[2025-07-28 13:13:10] -rw-r--r--. 1 boinc boinc       100 Jul 28 12:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 13:13:10] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 12:02 run_atlas
[2025-07-28 13:13:10] -rw-r--r--. 1 boinc boinc       105 Jul 28 12:02 job.xml
[2025-07-28 13:13:10] -rw-r--r--. 2 boinc boinc     15095 Jul 28 12:02 start_atlas.sh
[2025-07-28 13:13:10] drwxrwx--x. 2 boinc boinc        68 Jul 28 12:02 shared
[2025-07-28 13:13:10] -rw-r--r--. 2 boinc boinc    542893 Jul 28 12:02 input.tar.gz
[2025-07-28 13:13:10] -rw-r--r--. 1 boinc boinc      9627 Jul 28 12:02 init_data.xml
[2025-07-28 13:13:10] -rw-r--r--. 2 boinc boinc 228435923 Jul 28 12:02 EVNT.45743347._002703.pool.root.1
[2025-07-28 13:13:10] -rw-r--r--. 1 boinc boinc         0 Jul 28 12:02 boinc_lockfile
[2025-07-28 13:13:10] -rw-r--r--. 1 boinc boinc      2563 Jul 28 12:02 pandaJob.out
[2025-07-28 13:13:10] -rw-------. 1 boinc boinc    980125 Jul 28 12:02 agis_schedconf.cvmfs.json
[2025-07-28 13:13:10] -rw-------. 1 boinc boinc   1593052 Jul 28 12:02 agis_ddmendpoints.agis.ALL.json
[2025-07-28 13:13:10] drwx------. 4 boinc boinc      4096 Jul 28 12:02 pilot3
[2025-07-28 13:13:10] -rw-------. 1 boinc boinc        95 Jul 28 13:12 pilot_heartbeat.json
[2025-07-28 13:13:10] -rw-------. 1 boinc boinc 211247284 Jul 28 13:12 HITS.45743349._048804.pool.root.1
[2025-07-28 13:13:10] -rw-r--r--. 1 boinc boinc      8192 Jul 28 13:12 boinc_mmap_file
[2025-07-28 13:13:10] -rw-r--r--. 1 boinc boinc        27 Jul 28 13:12 wrapper_checkpoint.txt
[2025-07-28 13:13:10] -rw-------. 1 boinc boinc      1030 Jul 28 13:12 memory_monitor_summary.json
[2025-07-28 13:13:10] -rw-r--r--. 1 boinc boinc       529 Jul 28 13:12 boinc_task_state.xml
[2025-07-28 13:13:10] -rw-------. 1 boinc boinc    268324 Jul 28 13:12 log.45743349._048804.job.log.tgz.1
[2025-07-28 13:13:10] -rw-------. 1 boinc boinc      7792 Jul 28 13:12 heartbeat.json
[2025-07-28 13:13:10] -rw-------. 1 boinc boinc      4481 Jul 28 13:13 pilotlog.txt
[2025-07-28 13:13:10] -rw-------. 1 boinc boinc    417615 Jul 28 13:13 log.45743349._048804.job.log.1
[2025-07-28 13:13:10] -rw-------. 1 boinc boinc       357 Jul 28 13:13 output.list
[2025-07-28 13:13:10] -rw-r--r--. 1 boinc boinc       620 Jul 28 13:13 runtime_log
[2025-07-28 13:13:10] -rw-------. 1 boinc boinc    706560 Jul 28 13:13 result.tar.gz
[2025-07-28 13:13:10] -rw-------. 1 boinc boinc       641 Jul 28 13:13 TdgNDmNLG07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6KVLDmFaWKSn.diag
[2025-07-28 13:13:10] -rw-r--r--. 1 boinc boinc      8618 Jul 28 13:13 runtime_log.err
[2025-07-28 13:13:10] -rw-r--r--. 1 boinc boinc     21011 Jul 28 13:13 stderr.txt
[2025-07-28 13:13:10] HITS file was successfully produced:
[2025-07-28 13:13:10] -rw-------. 1 boinc boinc 211247284 Jul 28 13:12 shared/HITS.pool.root.1
[2025-07-28 13:13:10]  *** Contents of shared directory: ***
[2025-07-28 13:13:10] total 430624
[2025-07-28 13:13:10] -rw-r--r--. 2 boinc boinc     15095 Jul 28 12:02 start_atlas.sh
[2025-07-28 13:13:10] -rw-r--r--. 2 boinc boinc    542893 Jul 28 12:02 input.tar.gz
[2025-07-28 13:13:10] -rw-r--r--. 2 boinc boinc 228435923 Jul 28 12:02 ATLAS.root_0
[2025-07-28 13:13:10] -rw-------. 1 boinc boinc 211247284 Jul 28 13:12 HITS.pool.root.1
[2025-07-28 13:13:10] -rw-------. 1 boinc boinc    706560 Jul 28 13:13 result.tar.gz
13:13:12 (778363): run_atlas exited; CPU time 20926.310642
13:13:12 (778363): called boinc_finish(0)

</stderr_txt>
]]>

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