Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:42:15 (1638635): wrapper (7.7.26015): starting
16:42:15 (1638635): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 16:42:15] Arguments: --nthreads 8
[2025-07-27 16:42:15] Threads: 8
[2025-07-27 16:42:15] Checking for CVMFS
[2025-07-27 16:42:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 16:42:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 16:42:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 16:42:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 16:42:16] 2.13.1.0 704839 14616 162156 148823 3 196 32333064 40960001 10399 16776704 0 43719238 99.890 17311330 42286 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 16:42:16] CVMFS is ok
[2025-07-27 16:42:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 16:42:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 16:42:16] Further information can be found at the LHC@home message board.
[2025-07-27 16:42:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 16:42:16] Checking for apptainer binary...
[2025-07-27 16:42:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 16:42:16] Running /usr/bin/apptainer --version
[2025-07-27 16:42:16] apptainer version 1.4.1-1.el9
[2025-07-27 16:42:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 16:42:16] c-212-4.aglt2.org
[2025-07-27 16:42:16] apptainer works
[2025-07-27 16:42:16] Set ATHENA_PROC_NUMBER=8
[2025-07-27 16:42:16] Set ATHENA_CORE_NUMBER=8
[2025-07-27 16:42:16] Starting ATLAS job with PandaID=6747500193
[2025-07-27 16:42:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 17:58:04]  *** The last 200 lines of the pilot log: ***
[2025-07-27 17:58:04]  lfn=log.45743349._051565.job.log.tgz.1
[2025-07-27 17:58:04]  mtime=0
[2025-07-27 17:58:04]  protocol_id=None
[2025-07-27 17:58:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 17:58:04]  replicas=None
[2025-07-27 17:58:04]  scope=mc23_13p6TeV
[2025-07-27 17:58:04]  status=None
[2025-07-27 17:58:04]  status_code=0
[2025-07-27 17:58:04]  storage_token=
[2025-07-27 17:58:04]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6747500193/log.45743349._051565.job.log.tgz.1
[2025-07-27 17:58:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/45/log.45743349._051565.job.log.tgz.1
[2025-07-27 17:58:04]  workdir=None
[2025-07-27 17:58:04] ]
[2025-07-27 17:58:04] 2025-07-27 21:57:43,612 | INFO     | transferring file log.45743349._051565.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6747500193/log.45743349._051565.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 17:58:04] 2025-07-27 21:57:43,613 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6747500193/log.45743349._051565.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._051565.job
[2025-07-27 17:58:04] 2025-07-27 21:57:43,632 | INFO     | adding to output.list: log.45743349._051565.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/45/log.45743349._051565.job.log.tg
[2025-07-27 17:58:04] 2025-07-27 21:57:43,632 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 17:58:04] 2025-07-27 21:57:43,632 | INFO     | summary of transferred files:
[2025-07-27 17:58:04] 2025-07-27 21:57:43,632 | INFO     |  -- lfn=log.45743349._051565.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 17:58:04] 2025-07-27 21:57:43,632 | INFO     | stage-out finished correctly
[2025-07-27 17:58:04] 2025-07-27 21:57:43,852 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 17:58:04] 2025-07-27 21:57:45,739 | INFO     | monitor loop #333: job 0:6747500193 is in state 'finished'
[2025-07-27 17:58:04] 2025-07-27 21:57:45,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:58:04] 2025-07-27 21:57:46,185 | INFO     | job 6747500193 has state=finished
[2025-07-27 17:58:04] 2025-07-27 21:57:46,185 | INFO     | preparing for final server update for job 6747500193 in state='finished'
[2025-07-27 17:58:04] 2025-07-27 21:57:46,186 | INFO     | this job has now completed (state=finished)
[2025-07-27 17:58:04] 2025-07-27 21:57:46,186 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 17:58:04] 2025-07-27 21:57:46,186 | INFO     | log transfer has been attempted: DONE
[2025-07-27 17:58:04] 2025-07-27 21:57:46,186 | INFO     | job 6747500193 has finished - writing final server update
[2025-07-27 17:58:04] 2025-07-27 21:57:46,186 | INFO     | total number of processed events: 400 (read)
[2025-07-27 17:58:04] 2025-07-27 21:57:46,187 | INFO     | executing command: lscpu
[2025-07-27 17:58:04] 2025-07-27 21:57:46,257 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 17:58:04] 2025-07-27 21:57:48,242 | INFO     | monitor loop #334: job 0:6747500193 is in state 'finished'
[2025-07-27 17:58:04] 2025-07-27 21:57:48,242 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:58:04] 2025-07-27 21:57:50,745 | INFO     | monitor loop #335: job 0:6747500193 is in state 'finished'
[2025-07-27 17:58:04] 2025-07-27 21:57:50,746 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:58:04] 2025-07-27 21:57:50,852 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 17:58:04] 2025-07-27 21:57:50,856 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3286.4014791666655
[2025-07-27 17:58:04] 2025-07-27 21:57:50,868 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747500193/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:58:04] 2025-07-27 21:57:50,869 | INFO     | extracted standard info from prmon json
[2025-07-27 17:58:04] 2025-07-27 21:57:50,869 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 17:58:04] 2025-07-27 21:57:50,869 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 17:58:04] 2025-07-27 21:57:50,869 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 17:58:04] 2025-07-27 21:57:50,869 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 17:58:04] 2025-07-27 21:57:50,871 | INFO     | fitting pss+swap vs Time
[2025-07-27 17:58:04] 2025-07-27 21:57:50,871 | INFO     | sum of square deviations: 93240818.0
[2025-07-27 17:58:04] 2025-07-27 21:57:50,871 | INFO     | sum of deviations: -1071501539.0
[2025-07-27 17:58:04] 2025-07-27 21:57:50,871 | INFO     | mean x: 1753651292.0
[2025-07-27 17:58:04] 2025-07-27 21:57:50,871 | INFO     | mean y: 2545817.7014925373
[2025-07-27 17:58:04] 2025-07-27 21:57:50,871 | INFO     | -- intersect: 20155093795.641136
[2025-07-27 17:58:04] 2025-07-27 21:57:50,871 | INFO     | intersect: 20155093795.641136
[2025-07-27 17:58:04] 2025-07-27 21:57:50,872 | INFO     | chi2: 0.001333750536571023
[2025-07-27 17:58:04] 2025-07-27 21:57:50,872 | INFO     | -- intersect: 20155093795.641136
[2025-07-27 17:58:04] 2025-07-27 21:57:50,872 | INFO     | current memory leak: -11.49 B/s (using 67 data points, chi2=0.00)
[2025-07-27 17:58:04] 2025-07-27 21:57:50,872 | INFO     | could have reported an average CPU frequency of 3292 MHz (6 samples)
[2025-07-27 17:58:04] 2025-07-27 21:57:50,872 | INFO     | ..............................
[2025-07-27 17:58:04] 2025-07-27 21:57:50,872 | INFO     | . Timing measurements:
[2025-07-27 17:58:04] 2025-07-27 21:57:50,872 | INFO     | . get job = 0 s
[2025-07-27 17:58:04] 2025-07-27 21:57:50,872 | INFO     | . initial setup = 2 s
[2025-07-27 17:58:04] 2025-07-27 21:57:50,872 | INFO     | . payload setup = 6 s
[2025-07-27 17:58:04] 2025-07-27 21:57:50,872 | INFO     | . stage-in = 0 s
[2025-07-27 17:58:04] 2025-07-27 21:57:50,873 | INFO     | . payload execution = 4489 s
[2025-07-27 17:58:04] 2025-07-27 21:57:50,873 | INFO     | . stage-out = 0 s
[2025-07-27 17:58:04] 2025-07-27 21:57:50,873 | INFO     | . log creation = 0 s
[2025-07-27 17:58:04] 2025-07-27 21:57:50,873 | INFO     | ..............................
[2025-07-27 17:58:04] 2025-07-27 21:57:51,029 | INFO     | 
[2025-07-27 17:58:04] 2025-07-27 21:57:51,030 | INFO     | job summary report
[2025-07-27 17:58:04] 2025-07-27 21:57:51,030 | INFO     | --------------------------------------------------
[2025-07-27 17:58:04] 2025-07-27 21:57:51,030 | INFO     | PanDA job id: 6747500193
[2025-07-27 17:58:04] 2025-07-27 21:57:51,030 | INFO     | task id: 45743349
[2025-07-27 17:58:04] 2025-07-27 21:57:51,030 | INFO     | errors: (none)
[2025-07-27 17:58:04] 2025-07-27 21:57:51,030 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 17:58:04] 2025-07-27 21:57:51,030 | INFO     | pilot state: finished 
[2025-07-27 17:58:04] 2025-07-27 21:57:51,030 | INFO     | transexitcode: 0
[2025-07-27 17:58:04] 2025-07-27 21:57:51,030 | INFO     | exeerrorcode: 0
[2025-07-27 17:58:04] 2025-07-27 21:57:51,030 | INFO     | exeerrordiag: 
[2025-07-27 17:58:04] 2025-07-27 21:57:51,030 | INFO     | exitcode: 0
[2025-07-27 17:58:04] 2025-07-27 21:57:51,030 | INFO     | exitmsg: OK
[2025-07-27 17:58:04] 2025-07-27 21:57:51,030 | INFO     | cpuconsumptiontime: 33570 s
[2025-07-27 17:58:04] 2025-07-27 21:57:51,031 | INFO     | nevents: 400
[2025-07-27 17:58:04] 2025-07-27 21:57:51,031 | INFO     | neventsw: 0
[2025-07-27 17:58:04] 2025-07-27 21:57:51,031 | INFO     | pid: 1652634
[2025-07-27 17:58:04] 2025-07-27 21:57:51,031 | INFO     | pgrp: 1652634
[2025-07-27 17:58:04] 2025-07-27 21:57:51,031 | INFO     | corecount: 8
[2025-07-27 17:58:04] 2025-07-27 21:57:51,031 | INFO     | event service: False
[2025-07-27 17:58:04] 2025-07-27 21:57:51,031 | INFO     | sizes: {0: 2397253, 1: 2397452, 6: 2397714, 11: 2397742, 4500: 2423886, 4501: 2433068, 4508: 2433206}
[2025-07-27 17:58:04] 2025-07-27 21:57:51,031 | INFO     | --------------------------------------------------
[2025-07-27 17:58:04] 2025-07-27 21:57:51,031 | INFO     | 
[2025-07-27 17:58:04] 2025-07-27 21:57:51,031 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 17:58:04] 2025-07-27 21:57:51,053 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,054 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,054 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,054 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,054 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,054 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,054 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,054 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,054 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,054 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,054 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,055 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,055 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,055 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,055 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,055 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,055 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,055 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 17:58:04] 2025-07-27 21:57:51,055 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,055 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 17:58:04] 2025-07-27 21:57:51,055 | INFO     | job 6747500193 has completed (purged errors)
[2025-07-27 17:58:04] 2025-07-27 21:57:51,055 | INFO     | overall cleanup function is called
[2025-07-27 17:58:04] 2025-07-27 21:57:52,065 | INFO     | --- collectZombieJob: --- 10, [1652634]
[2025-07-27 17:58:04] 2025-07-27 21:57:52,065 | INFO     | zombie collector waiting for pid 1652634
[2025-07-27 17:58:04] 2025-07-27 21:57:52,065 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 17:58:04] 2025-07-27 21:57:52,065 | INFO     | collected zombie processes
[2025-07-27 17:58:04] 2025-07-27 21:57:52,065 | INFO     | will attempt to kill all subprocesses of pid=1652634
[2025-07-27 17:58:04] 2025-07-27 21:57:52,573 | INFO     | PID=1642224 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 17:58:04] 2025-07-27 21:57:52,574 | INFO     | .. there are 14 such processes running
[2025-07-27 17:58:04] 2025-07-27 21:57:52,622 | INFO     | process IDs to be killed: [1652634] (in reverse order)
[2025-07-27 17:58:04] 2025-07-27 21:57:52,739 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 17:58:04] 2025-07-27 21:57:52,739 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 17:58:04] 2025-07-27 21:57:52,752 | INFO     | did not find any defunct processes belonging to 1652634
[2025-07-27 17:58:04] 2025-07-27 21:57:52,760 | INFO     | did not find any defunct processes belonging to 1652634
[2025-07-27 17:58:04] 2025-07-27 21:57:52,760 | INFO     | ready for new job
[2025-07-27 17:58:04] 2025-07-27 21:57:52,760 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 17:58:04] 2025-07-27 21:57:52,761 | INFO     | ***************************************
[2025-07-27 17:58:04] 2025-07-27 21:57:52,761 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 17:58:04] 2025-07-27 21:57:52,761 | INFO     | ***************************************
[2025-07-27 17:58:04] 2025-07-27 21:57:52,761 | INFO     | 
[2025-07-27 17:58:04] 2025-07-27 21:57:52,765 | INFO     | architecture information:
[2025-07-27 17:58:04] 2025-07-27 21:57:52,765 | INFO     | executing command: cat /etc/os-release
[2025-07-27 17:58:04] 2025-07-27 21:57:52,781 | INFO     | cat /etc/os-release:
[2025-07-27 17:58:04] NAME="CentOS Linux"
[2025-07-27 17:58:04] VERSION="7 (Core)"
[2025-07-27 17:58:04] ID="centos"
[2025-07-27 17:58:04] ID_LIKE="rhel fedora"
[2025-07-27 17:58:04] VERSION_ID="7"
[2025-07-27 17:58:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 17:58:04] ANSI_COLOR="0;31"
[2025-07-27 17:58:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 17:58:04] HOME_URL="https://www.centos.org/"
[2025-07-27 17:58:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 17:58:04] 
[2025-07-27 17:58:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 17:58:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 17:58:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 17:58:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 17:58:04] 
[2025-07-27 17:58:04] 2025-07-27 21:57:52,782 | INFO     | ***************************************
[2025-07-27 17:58:04] 2025-07-27 21:57:53,284 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 17:58:04] 2025-07-27 21:57:53,298 | INFO     | sufficient remaining disk space (124086386688 B)
[2025-07-27 17:58:04] 2025-07-27 21:57:53,298 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 17:58:04] 2025-07-27 21:57:53,299 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 17:58:04] 2025-07-27 21:57:53,299 | INFO     | update_server=False
[2025-07-27 17:58:04] 2025-07-27 21:57:53,299 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 17:58:04] 2025-07-27 21:57:53,299 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 17:58:04] 2025-07-27 21:57:53,299 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 17:58:04] 2025-07-27 21:57:53,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 17:58:04] 2025-07-27 21:57:53,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 17:58:04] 2025-07-27 21:57:53,562 | INFO     | all job control threads have been joined
[2025-07-27 17:58:04] 2025-07-27 21:57:53,816 | INFO     | all data control threads have been joined
[2025-07-27 17:58:04] 2025-07-27 21:57:54,203 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 17:58:04] 2025-07-27 21:57:54,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:58:04] 2025-07-27 21:57:54,254 | INFO     | aborting loop
[2025-07-27 17:58:04] 2025-07-27 21:57:54,304 | INFO     | [job] retrieve thread has finished
[2025-07-27 17:58:04] 2025-07-27 21:57:54,363 | INFO     | all payload control threads have been joined
[2025-07-27 17:58:04] 2025-07-27 21:57:54,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 17:58:04] 2025-07-27 21:57:54,527 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 17:58:04] 2025-07-27 21:57:54,527 | INFO     | [data] copytool_in thread has finished
[2025-07-27 17:58:04] 2025-07-27 21:57:54,568 | INFO     | [job] control thread has finished
[2025-07-27 17:58:04] 2025-07-27 21:57:54,821 | INFO     | [data] control thread has finished
[2025-07-27 17:58:04] 2025-07-27 21:57:54,836 | INFO     | [payload] failed_post thread has finished
[2025-07-27 17:58:04] 2025-07-27 21:57:54,918 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 17:58:04] 2025-07-27 21:57:55,126 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 17:58:04] 2025-07-27 21:57:55,138 | INFO     | [job] validate thread has finished
[2025-07-27 17:58:04] 2025-07-27 21:57:55,259 | INFO     | [job] job monitor thread has finished
[2025-07-27 17:58:04] 2025-07-27 21:57:55,326 | INFO     | [payload] validate_post thread has finished
[2025-07-27 17:58:04] 2025-07-27 21:57:55,369 | INFO     | [payload] control thread has finished
[2025-07-27 17:58:04] 2025-07-27 21:57:55,493 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 17:58:04] 2025-07-27 21:57:55,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:58:04] 2025-07-27 21:57:56,209 | INFO     | [data] copytool_out thread has finished
[2025-07-27 17:58:04] 2025-07-27 21:57:56,956 | INFO     | [job] queue monitor thread has finished
[2025-07-27 17:58:04] 2025-07-27 21:57:58,451 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 17:58:04] 2025-07-27 21:57:58,777 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139694883751744)>', '<ExcThread(monitor, started 139693878408960)>']
[2025-07-27 17:58:04] 2025-07-27 21:57:59,324 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 17:58:04] 2025-07-27 21:57:59,325 | INFO     | [monitor] control thread has ended
[2025-07-27 17:58:04] 2025-07-27 21:58:03,802 | INFO     | all workflow threads have been joined
[2025-07-27 17:58:04] 2025-07-27 21:58:03,802 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 17:58:04] 2025-07-27 21:58:03,802 | INFO     | traces error code: 0
[2025-07-27 17:58:04] 2025-07-27 21:58:03,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 17:58:04] 2025-07-27 21:58:03,876 [wrapper] ==== pilot stdout END ====
[2025-07-27 17:58:04] 2025-07-27 21:58:03,881 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 17:58:04] 2025-07-27 21:58:03,884 [wrapper] pilotpid: 1642224
[2025-07-27 17:58:04] 2025-07-27 21:58:03,887 [wrapper] Pilot exit status: 0
[2025-07-27 17:58:04] 2025-07-27 21:58:03,898 [wrapper] pandaids: 6747500193
[2025-07-27 17:58:04] 2025-07-27 21:58:03,963 [wrapper] cleanup supervisor_pilot 1925109 1642225
[2025-07-27 17:58:04] 2025-07-27 21:58:03,966 [wrapper] Test setup, not cleaning
[2025-07-27 17:58:04] 2025-07-27 21:58:03,969 [wrapper] apfmon messages muted
[2025-07-27 17:58:04] 2025-07-27 21:58:03,972 [wrapper] ==== wrapper stdout END ====
[2025-07-27 17:58:04] 2025-07-27 21:58:03,975 [wrapper] ==== wrapper stderr END ====
[2025-07-27 17:58:04]  *** Error codes and diagnostics ***
[2025-07-27 17:58:04]     "exeErrorCode": 0,
[2025-07-27 17:58:04]     "exeErrorDiag": "",
[2025-07-27 17:58:04]     "pilotErrorCode": 0,
[2025-07-27 17:58:04]     "pilotErrorDiag": "",
[2025-07-27 17:58:04]  *** Listing of results directory ***
[2025-07-27 17:58:04] total 436100
[2025-07-27 17:58:04] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 10:53 pilot3.tar.gz
[2025-07-27 17:58:04] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 11:29 queuedata.json
[2025-07-27 17:58:04] -rwx------. 1 boincer umatlas     36292 Jul 27 11:30 runpilot2-wrapper.sh
[2025-07-27 17:58:04] -rw-r--r--. 1 boincer umatlas       100 Jul 27 16:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 17:58:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 16:42 run_atlas
[2025-07-27 17:58:04] -rw-r--r--. 1 boincer umatlas       105 Jul 27 16:42 job.xml
[2025-07-27 17:58:04] -rw-r--r--. 2 boincer umatlas 229158223 Jul 27 16:42 EVNT.45743347._002759.pool.root.1
[2025-07-27 17:58:04] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 16:42 start_atlas.sh
[2025-07-27 17:58:04] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 16:42 shared
[2025-07-27 17:58:04] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 16:42 input.tar.gz
[2025-07-27 17:58:04] -rw-r--r--. 1 boincer umatlas         0 Jul 27 16:42 boinc_lockfile
[2025-07-27 17:58:04] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 16:42 pandaJob.out
[2025-07-27 17:58:04] -rw-------. 1 boincer umatlas    980109 Jul 27 16:42 agis_schedconf.cvmfs.json
[2025-07-27 17:58:04] -rw-------. 1 boincer umatlas   1593052 Jul 27 16:42 agis_ddmendpoints.agis.ALL.json
[2025-07-27 17:58:04] drwx------. 4 boincer umatlas      4096 Jul 27 16:42 pilot3
[2025-07-27 17:58:04] -rw-r--r--. 1 boincer umatlas      6945 Jul 27 17:55 init_data.xml
[2025-07-27 17:58:04] -rw-------. 1 boincer umatlas        95 Jul 27 17:57 pilot_heartbeat.json
[2025-07-27 17:58:04] -rw-r--r--. 1 boincer umatlas       530 Jul 27 17:57 boinc_task_state.xml
[2025-07-27 17:58:04] -rw-------. 1 boincer umatlas 212011846 Jul 27 17:57 HITS.45743349._051565.pool.root.1
[2025-07-27 17:58:04] -rw-------. 1 boincer umatlas      1025 Jul 27 17:57 memory_monitor_summary.json
[2025-07-27 17:58:04] -rw-------. 1 boincer umatlas    308341 Jul 27 17:57 log.45743349._051565.job.log.tgz.1
[2025-07-27 17:58:04] -rw-------. 1 boincer umatlas      7764 Jul 27 17:57 heartbeat.json
[2025-07-27 17:58:04] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 17:58 boinc_mmap_file
[2025-07-27 17:58:04] -rw-r--r--. 1 boincer umatlas        27 Jul 27 17:58 wrapper_checkpoint.txt
[2025-07-27 17:58:04] -rw-------. 1 boincer umatlas      4481 Jul 27 17:58 pilotlog.txt
[2025-07-27 17:58:04] -rw-------. 1 boincer umatlas    446694 Jul 27 17:58 log.45743349._051565.job.log.1
[2025-07-27 17:58:04] -rw-------. 1 boincer umatlas       357 Jul 27 17:58 output.list
[2025-07-27 17:58:04] -rw-r--r--. 1 boincer umatlas       620 Jul 27 17:58 runtime_log
[2025-07-27 17:58:04] -rw-------. 1 boincer umatlas    778240 Jul 27 17:58 result.tar.gz
[2025-07-27 17:58:04] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 17:58 runtime_log.err
[2025-07-27 17:58:04] -rw-------. 1 boincer umatlas       650 Jul 27 17:58 9xWKDmgVI07n9Rq4apOajLDm4fhM0noT9bVof3QYDmOk2KDmzMm7yn.diag
[2025-07-27 17:58:04] -rw-r--r--. 1 boincer umatlas     21705 Jul 27 17:58 stderr.txt
[2025-07-27 17:58:04] HITS file was successfully produced:
[2025-07-27 17:58:04] -rw-------. 1 boincer umatlas 212011846 Jul 27 17:57 shared/HITS.pool.root.1
[2025-07-27 17:58:04]  *** Contents of shared directory: ***
[2025-07-27 17:58:04] total 432148
[2025-07-27 17:58:04] -rw-r--r--. 2 boincer umatlas 229158223 Jul 27 16:42 ATLAS.root_0
[2025-07-27 17:58:04] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 16:42 start_atlas.sh
[2025-07-27 17:58:04] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 16:42 input.tar.gz
[2025-07-27 17:58:04] -rw-------. 1 boincer umatlas 212011846 Jul 27 17:57 HITS.pool.root.1
[2025-07-27 17:58:04] -rw-------. 1 boincer umatlas    778240 Jul 27 17:58 result.tar.gz
17:58:05 (1638635): run_atlas exited; CPU time 33677.500656
17:58:05 (1638635): called boinc_finish(0)

</stderr_txt>
]]>

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