Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:43:01 (2593816): wrapper (7.7.26015): starting
16:43:01 (2593816): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 16:43:01] Arguments: --nthreads 8
[2025-07-27 16:43:01] Threads: 8
[2025-07-27 16:43:01] Checking for CVMFS
[2025-07-27 16:43:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 16:43:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 16:43:02] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 16:43:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 16:43:02] 2.13.1.0 1630706 13426 212452 148823 0 148 22069802 40960000 21949 16776704 0 54657745 99.692 88603377 39795 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 16:43:02] CVMFS is ok
[2025-07-27 16:43:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 16:43:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 16:43:02] Further information can be found at the LHC@home message board.
[2025-07-27 16:43:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 16:43:02] Checking for apptainer binary...
[2025-07-27 16:43:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 16:43:02] Running /usr/bin/apptainer --version
[2025-07-27 16:43:02] apptainer version 1.4.1-1.el9
[2025-07-27 16:43:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 16:43:02] c-212-16.aglt2.org
[2025-07-27 16:43:02] apptainer works
[2025-07-27 16:43:02] Set ATHENA_PROC_NUMBER=8
[2025-07-27 16:43:02] Set ATHENA_CORE_NUMBER=8
[2025-07-27 16:43:02] Starting ATLAS job with PandaID=6747411491
[2025-07-27 16:43:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 18:15:46]  *** The last 200 lines of the pilot log: ***
[2025-07-27 18:15:47] 2025-07-27 22:15:01,154 | INFO     |  -- lfn=log.45743349._048705.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 18:15:47] 2025-07-27 22:15:01,154 | INFO     | stage-out finished correctly
[2025-07-27 18:15:47] 2025-07-27 22:15:01,895 | WARNING  | process 2605138 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 18:15:47] 2025-07-27 22:15:01,895 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747411491/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:15:47] 2025-07-27 22:15:01,897 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747411491/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:15:47] 2025-07-27 22:15:01,898 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3297422 B
[2025-07-27 18:15:47] 2025-07-27 22:15:01,898 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15546 B
[2025-07-27 18:15:47] 2025-07-27 22:15:01,898 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 18:15:47] 2025-07-27 22:15:01,928 | INFO     | sufficient remaining disk space (128921370624 B)
[2025-07-27 18:15:47] 2025-07-27 22:15:01,929 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-27 18:15:47] 2025-07-27 22:15:01,929 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6747411491: 3601827 B (within 2537553920 B limit)
[2025-07-27 18:15:47] 2025-07-27 22:15:01,930 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6747411491/HITS.45743349._048705.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-27 18:15:47] 2025-07-27 22:15:01,930 | INFO     | total size of present files: 0 B (workdir size: 3601827 B)
[2025-07-27 18:15:47] 2025-07-27 22:15:01,930 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6747411491/HITS.45743349._048705.pool.root.1 since it does not exist
[2025-07-27 18:15:47] 2025-07-27 22:15:02,397 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 18:15:47] 2025-07-27 22:15:02,826 | INFO     | PID=2598384 has CPU usage=13.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 18:15:47] 2025-07-27 22:15:02,827 | INFO     | .. there are 28 such processes running
[2025-07-27 18:15:47] 2025-07-27 22:15:02,848 | INFO     | number of running child processes to parent process 2605138: 1
[2025-07-27 18:15:47] 2025-07-27 22:15:02,848 | INFO     | maximum number of monitored processes: 6
[2025-07-27 18:15:47] 2025-07-27 22:15:04,291 | INFO     | job 6747411491 has state=finished
[2025-07-27 18:15:47] 2025-07-27 22:15:04,291 | INFO     | preparing for final server update for job 6747411491 in state='finished'
[2025-07-27 18:15:47] 2025-07-27 22:15:04,292 | INFO     | this job has now completed (state=finished)
[2025-07-27 18:15:47] 2025-07-27 22:15:04,292 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 18:15:47] 2025-07-27 22:15:04,293 | INFO     | log transfer has been attempted: DONE
[2025-07-27 18:15:47] 2025-07-27 22:15:04,293 | INFO     | job 6747411491 has finished - writing final server update
[2025-07-27 18:15:47] 2025-07-27 22:15:04,293 | INFO     | total number of processed events: 400 (read)
[2025-07-27 18:15:47] 2025-07-27 22:15:04,294 | INFO     | executing command: lscpu
[2025-07-27 18:15:47] 2025-07-27 22:15:04,363 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 18:15:47] 2025-07-27 22:15:05,354 | INFO     | monitor loop #382: job 0:6747411491 is in state 'finished'
[2025-07-27 18:15:47] 2025-07-27 22:15:05,356 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:15:47] 2025-07-27 22:15:07,868 | INFO     | monitor loop #383: job 0:6747411491 is in state 'finished'
[2025-07-27 18:15:47] 2025-07-27 22:15:07,868 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:15:47] 2025-07-27 22:15:10,377 | INFO     | monitor loop #384: job 0:6747411491 is in state 'finished'
[2025-07-27 18:15:47] 2025-07-27 22:15:10,377 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:15:47] 2025-07-27 22:15:12,881 | INFO     | monitor loop #385: job 0:6747411491 is in state 'finished'
[2025-07-27 18:15:47] 2025-07-27 22:15:12,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:15:47] 2025-07-27 22:15:13,070 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 18:15:47] 2025-07-27 22:15:13,086 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3120.9550624999993
[2025-07-27 18:15:47] 2025-07-27 22:15:13,101 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747411491/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:15:47] 2025-07-27 22:15:13,102 | INFO     | extracted standard info from prmon json
[2025-07-27 18:15:47] 2025-07-27 22:15:13,102 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 18:15:47] 2025-07-27 22:15:13,102 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 18:15:47] 2025-07-27 22:15:13,103 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 18:15:47] 2025-07-27 22:15:13,103 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 18:15:47] 2025-07-27 22:15:13,105 | INFO     | fitting pss+swap vs Time
[2025-07-27 18:15:47] 2025-07-27 22:15:13,105 | INFO     | sum of square deviations: 177262343.80722898
[2025-07-27 18:15:47] 2025-07-27 22:15:13,105 | INFO     | sum of deviations: -9620173272.915665
[2025-07-27 18:15:47] 2025-07-27 22:15:13,106 | INFO     | mean x: 1753651837.0481927
[2025-07-27 18:15:47] 2025-07-27 22:15:13,106 | INFO     | mean y: 2610133.2289156625
[2025-07-27 18:15:47] 2025-07-27 22:15:13,106 | INFO     | -- intersect: 95174738462.50853
[2025-07-27 18:15:47] 2025-07-27 22:15:13,106 | INFO     | intersect: 95174738462.50853
[2025-07-27 18:15:47] 2025-07-27 22:15:13,106 | INFO     | chi2: 0.044259045241397926
[2025-07-27 18:15:47] 2025-07-27 22:15:13,106 | INFO     | -- intersect: 95174738462.50853
[2025-07-27 18:15:47] 2025-07-27 22:15:13,106 | INFO     | current memory leak: -54.27 B/s (using 83 data points, chi2=0.04)
[2025-07-27 18:15:47] 2025-07-27 22:15:13,107 | INFO     | could have reported an average CPU frequency of 3122 MHz (7 samples)
[2025-07-27 18:15:47] 2025-07-27 22:15:13,107 | INFO     | ..............................
[2025-07-27 18:15:47] 2025-07-27 22:15:13,107 | INFO     | . Timing measurements:
[2025-07-27 18:15:47] 2025-07-27 22:15:13,107 | INFO     | . get job = 0 s
[2025-07-27 18:15:47] 2025-07-27 22:15:13,107 | INFO     | . initial setup = 2 s
[2025-07-27 18:15:47] 2025-07-27 22:15:13,107 | INFO     | . payload setup = 9 s
[2025-07-27 18:15:47] 2025-07-27 22:15:13,107 | INFO     | . stage-in = 0 s
[2025-07-27 18:15:47] 2025-07-27 22:15:13,107 | INFO     | . payload execution = 5470 s
[2025-07-27 18:15:47] 2025-07-27 22:15:13,107 | INFO     | . stage-out = 1 s
[2025-07-27 18:15:47] 2025-07-27 22:15:13,107 | INFO     | . log creation = 0 s
[2025-07-27 18:15:47] 2025-07-27 22:15:13,107 | INFO     | ..............................
[2025-07-27 18:15:47] 2025-07-27 22:15:13,197 | INFO     | 
[2025-07-27 18:15:47] 2025-07-27 22:15:13,198 | INFO     | job summary report
[2025-07-27 18:15:47] 2025-07-27 22:15:13,198 | INFO     | --------------------------------------------------
[2025-07-27 18:15:47] 2025-07-27 22:15:13,198 | INFO     | PanDA job id: 6747411491
[2025-07-27 18:15:47] 2025-07-27 22:15:13,198 | INFO     | task id: 45743349
[2025-07-27 18:15:47] 2025-07-27 22:15:13,198 | INFO     | errors: (none)
[2025-07-27 18:15:47] 2025-07-27 22:15:13,198 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 18:15:47] 2025-07-27 22:15:13,198 | INFO     | pilot state: finished 
[2025-07-27 18:15:47] 2025-07-27 22:15:13,198 | INFO     | transexitcode: 0
[2025-07-27 18:15:47] 2025-07-27 22:15:13,198 | INFO     | exeerrorcode: 0
[2025-07-27 18:15:47] 2025-07-27 22:15:13,198 | INFO     | exeerrordiag: 
[2025-07-27 18:15:47] 2025-07-27 22:15:13,198 | INFO     | exitcode: 0
[2025-07-27 18:15:47] 2025-07-27 22:15:13,198 | INFO     | exitmsg: OK
[2025-07-27 18:15:47] 2025-07-27 22:15:13,198 | INFO     | cpuconsumptiontime: 36627 s
[2025-07-27 18:15:47] 2025-07-27 22:15:13,212 | INFO     | nevents: 400
[2025-07-27 18:15:47] 2025-07-27 22:15:13,213 | INFO     | neventsw: 0
[2025-07-27 18:15:47] 2025-07-27 22:15:13,213 | INFO     | pid: 2605138
[2025-07-27 18:15:47] 2025-07-27 22:15:13,213 | INFO     | pgrp: 2605138
[2025-07-27 18:15:47] 2025-07-27 22:15:13,213 | INFO     | corecount: 8
[2025-07-27 18:15:47] 2025-07-27 22:15:13,213 | INFO     | event service: False
[2025-07-27 18:15:47] 2025-07-27 22:15:13,213 | INFO     | sizes: {0: 2397475, 9: 2397737, 11: 2397765, 5484: 2424363, 5485: 2424362, 5486: 2433416, 5487: 2433628, 5498: 2433822}
[2025-07-27 18:15:47] 2025-07-27 22:15:13,213 | INFO     | --------------------------------------------------
[2025-07-27 18:15:47] 2025-07-27 22:15:13,213 | INFO     | 
[2025-07-27 18:15:47] 2025-07-27 22:15:13,213 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 18:15:47] 2025-07-27 22:15:13,239 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,239 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,239 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,240 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,240 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,240 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,240 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,240 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,240 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,240 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,240 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,240 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,240 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,240 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,240 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,240 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,240 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,240 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 18:15:47] 2025-07-27 22:15:13,241 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,241 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 18:15:47] 2025-07-27 22:15:13,241 | INFO     | job 6747411491 has completed (purged errors)
[2025-07-27 18:15:47] 2025-07-27 22:15:13,241 | INFO     | overall cleanup function is called
[2025-07-27 18:15:47] 2025-07-27 22:15:14,254 | INFO     | --- collectZombieJob: --- 10, [2605138]
[2025-07-27 18:15:47] 2025-07-27 22:15:14,254 | INFO     | zombie collector waiting for pid 2605138
[2025-07-27 18:15:47] 2025-07-27 22:15:14,254 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 18:15:47] 2025-07-27 22:15:14,254 | INFO     | collected zombie processes
[2025-07-27 18:15:47] 2025-07-27 22:15:14,254 | INFO     | will attempt to kill all subprocesses of pid=2605138
[2025-07-27 18:15:47] 2025-07-27 22:15:14,701 | INFO     | process IDs to be killed: [2605138] (in reverse order)
[2025-07-27 18:15:47] 2025-07-27 22:15:14,828 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 18:15:47] 2025-07-27 22:15:14,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 18:15:47] 2025-07-27 22:15:14,846 | INFO     | did not find any defunct processes belonging to 2605138
[2025-07-27 18:15:47] 2025-07-27 22:15:14,862 | INFO     | did not find any defunct processes belonging to 2605138
[2025-07-27 18:15:47] 2025-07-27 22:15:14,862 | INFO     | ready for new job
[2025-07-27 18:15:47] 2025-07-27 22:15:14,862 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 18:15:47] 2025-07-27 22:15:14,864 | INFO     | ***************************************
[2025-07-27 18:15:47] 2025-07-27 22:15:14,864 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 18:15:47] 2025-07-27 22:15:14,864 | INFO     | ***************************************
[2025-07-27 18:15:47] 2025-07-27 22:15:14,864 | INFO     | 
[2025-07-27 18:15:47] 2025-07-27 22:15:14,871 | INFO     | architecture information:
[2025-07-27 18:15:47] 2025-07-27 22:15:14,871 | INFO     | executing command: cat /etc/os-release
[2025-07-27 18:15:47] 2025-07-27 22:15:14,901 | INFO     | cat /etc/os-release:
[2025-07-27 18:15:47] NAME="CentOS Linux"
[2025-07-27 18:15:47] VERSION="7 (Core)"
[2025-07-27 18:15:47] ID="centos"
[2025-07-27 18:15:47] ID_LIKE="rhel fedora"
[2025-07-27 18:15:47] VERSION_ID="7"
[2025-07-27 18:15:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 18:15:47] ANSI_COLOR="0;31"
[2025-07-27 18:15:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 18:15:47] HOME_URL="https://www.centos.org/"
[2025-07-27 18:15:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 18:15:47] 
[2025-07-27 18:15:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 18:15:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 18:15:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 18:15:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 18:15:47] 
[2025-07-27 18:15:47] 2025-07-27 22:15:14,902 | INFO     | ***************************************
[2025-07-27 18:15:47] 2025-07-27 22:15:15,404 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 18:15:47] 2025-07-27 22:15:15,419 | INFO     | sufficient remaining disk space (128923467776 B)
[2025-07-27 18:15:47] 2025-07-27 22:15:15,419 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 18:15:47] 2025-07-27 22:15:15,419 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 18:15:47] 2025-07-27 22:15:15,420 | INFO     | update_server=False
[2025-07-27 18:15:47] 2025-07-27 22:15:15,420 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 18:15:47] 2025-07-27 22:15:15,858 | INFO     | all job control threads have been joined
[2025-07-27 18:15:47] 2025-07-27 22:15:15,894 | INFO     | all payload control threads have been joined
[2025-07-27 18:15:47] 2025-07-27 22:15:16,391 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:15:47] 2025-07-27 22:15:16,391 | INFO     | aborting loop
[2025-07-27 18:15:47] 2025-07-27 22:15:16,426 | INFO     | all data control threads have been joined
[2025-07-27 18:15:47] 2025-07-27 22:15:16,426 | INFO     | [job] retrieve thread has finished
[2025-07-27 18:15:47] 2025-07-27 22:15:16,455 | INFO     | [data] copytool_in thread has finished
[2025-07-27 18:15:47] 2025-07-27 22:15:16,683 | INFO     | [job] validate thread has finished
[2025-07-27 18:15:47] 2025-07-27 22:15:16,776 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 18:15:47] 2025-07-27 22:15:16,805 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 18:15:47] 2025-07-27 22:15:16,865 | INFO     | [job] control thread has finished
[2025-07-27 18:15:47] 2025-07-27 22:15:16,910 | INFO     | [payload] control thread has finished
[2025-07-27 18:15:47] 2025-07-27 22:15:16,953 | INFO     | [payload] validate_post thread has finished
[2025-07-27 18:15:47] 2025-07-27 22:15:17,375 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 18:15:47] 2025-07-27 22:15:17,378 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 18:15:47] 2025-07-27 22:15:17,408 | INFO     | [job] job monitor thread has finished
[2025-07-27 18:15:47] 2025-07-27 22:15:17,431 | INFO     | [data] control thread has finished
[2025-07-27 18:15:47] 2025-07-27 22:15:17,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 18:15:47] 2025-07-27 22:15:17,770 | INFO     | [payload] failed_post thread has finished
[2025-07-27 18:15:47] 2025-07-27 22:15:18,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:15:47] 2025-07-27 22:15:18,783 | INFO     | [data] copytool_out thread has finished
[2025-07-27 18:15:47] 2025-07-27 22:15:19,213 | INFO     | [job] queue monitor thread has finished
[2025-07-27 18:15:47] 2025-07-27 22:15:21,550 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 18:15:47] 2025-07-27 22:15:26,009 | INFO     | job.realtimelogging is not enabled
[2025-07-27 18:15:47] 2025-07-27 22:15:27,015 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 18:15:47] 2025-07-27 22:15:28,684 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140669986490176)>', '<ExcThread(monitor, started 140669481895680)>']
[2025-07-27 18:15:47] 2025-07-27 22:15:33,711 | INFO     | all workflow threads have been joined
[2025-07-27 18:15:47] 2025-07-27 22:15:33,719 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 18:15:47] 2025-07-27 22:15:33,720 | INFO     | traces error code: 0
[2025-07-27 18:15:47] 2025-07-27 22:15:33,720 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 18:15:47] 2025-07-27 22:15:45,578 | INFO     | PID=2598384 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 18:15:47] 2025-07-27 22:15:45,579 | INFO     | .. there are 28 such processes running
[2025-07-27 18:15:47] 2025-07-27 22:15:45,579 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 18:15:47] 2025-07-27 22:15:45,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 18:15:47] 2025-07-27 22:15:45,579 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 18:15:47] 2025-07-27 22:15:45,579 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 18:15:47] 2025-07-27 22:15:45,579 | INFO     | [monitor] control thread has ended
[2025-07-27 18:15:47] 2025-07-27 22:15:45,859 [wrapper] ==== pilot stdout END ====
[2025-07-27 18:15:47] 2025-07-27 22:15:45,903 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 18:15:47] 2025-07-27 22:15:45,921 [wrapper] pilotpid: 2598384
[2025-07-27 18:15:47] 2025-07-27 22:15:45,935 [wrapper] Pilot exit status: 0
[2025-07-27 18:15:47] 2025-07-27 22:15:45,997 [wrapper] pandaids: 6747411491
[2025-07-27 18:15:47] 2025-07-27 22:15:46,458 [wrapper] cleanup supervisor_pilot 2923512 2598385
[2025-07-27 18:15:47] 2025-07-27 22:15:46,473 [wrapper] Test setup, not cleaning
[2025-07-27 18:15:47] 2025-07-27 22:15:46,494 [wrapper] apfmon messages muted
[2025-07-27 18:15:47] 2025-07-27 22:15:46,520 [wrapper] ==== wrapper stdout END ====
[2025-07-27 18:15:47] 2025-07-27 22:15:46,551 [wrapper] ==== wrapper stderr END ====
[2025-07-27 18:15:47]  *** Error codes and diagnostics ***
[2025-07-27 18:15:47]     "exeErrorCode": 0,
[2025-07-27 18:15:47]     "exeErrorDiag": "",
[2025-07-27 18:15:47]     "pilotErrorCode": 0,
[2025-07-27 18:15:47]     "pilotErrorDiag": "",
[2025-07-27 18:15:47]  *** Listing of results directory ***
[2025-07-27 18:15:47] total 427896
[2025-07-27 18:15:47] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 09:04 pilot3.tar.gz
[2025-07-27 18:15:47] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 09:05 queuedata.json
[2025-07-27 18:15:47] -rwx------. 1 boincer umatlas     36292 Jul 27 09:06 runpilot2-wrapper.sh
[2025-07-27 18:15:47] -rw-r--r--. 1 boincer umatlas       100 Jul 27 16:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 18:15:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 16:43 run_atlas
[2025-07-27 18:15:47] -rw-r--r--. 1 boincer umatlas       105 Jul 27 16:43 job.xml
[2025-07-27 18:15:47] -rw-r--r--. 2 boincer umatlas 228706552 Jul 27 16:43 EVNT.45743347._002699.pool.root.1
[2025-07-27 18:15:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 16:43 start_atlas.sh
[2025-07-27 18:15:47] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 16:43 shared
[2025-07-27 18:15:47] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 16:43 input.tar.gz
[2025-07-27 18:15:47] -rw-r--r--. 1 boincer umatlas         0 Jul 27 16:43 boinc_lockfile
[2025-07-27 18:15:47] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 16:43 pandaJob.out
[2025-07-27 18:15:47] -rw-------. 1 boincer umatlas    980109 Jul 27 16:43 agis_schedconf.cvmfs.json
[2025-07-27 18:15:47] -rw-------. 1 boincer umatlas   1593052 Jul 27 16:43 agis_ddmendpoints.agis.ALL.json
[2025-07-27 18:15:47] drwx------. 4 boincer umatlas      4096 Jul 27 16:43 pilot3
[2025-07-27 18:15:47] -rw-r--r--. 1 boincer umatlas      6944 Jul 27 18:11 init_data.xml
[2025-07-27 18:15:47] -rw-r--r--. 1 boincer umatlas       529 Jul 27 18:14 boinc_task_state.xml
[2025-07-27 18:15:47] -rw-------. 1 boincer umatlas 203901118 Jul 27 18:14 HITS.45743349._048705.pool.root.1
[2025-07-27 18:15:47] -rw-------. 1 boincer umatlas        95 Jul 27 18:14 pilot_heartbeat.json
[2025-07-27 18:15:47] -rw-------. 1 boincer umatlas      1028 Jul 27 18:14 memory_monitor_summary.json
[2025-07-27 18:15:47] -rw-------. 1 boincer umatlas    312965 Jul 27 18:15 log.45743349._048705.job.log.tgz.1
[2025-07-27 18:15:47] -rw-------. 1 boincer umatlas      7773 Jul 27 18:15 heartbeat.json
[2025-07-27 18:15:47] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 18:15 boinc_mmap_file
[2025-07-27 18:15:47] -rw-r--r--. 1 boincer umatlas        27 Jul 27 18:15 wrapper_checkpoint.txt
[2025-07-27 18:15:47] -rw-------. 1 boincer umatlas       823 Jul 27 18:15 pilotlog.txt
[2025-07-27 18:15:47] -rw-------. 1 boincer umatlas    524762 Jul 27 18:15 log.45743349._048705.job.log.1
[2025-07-27 18:15:47] -rw-------. 1 boincer umatlas       357 Jul 27 18:15 output.list
[2025-07-27 18:15:47] -rw-r--r--. 1 boincer umatlas       620 Jul 27 18:15 runtime_log
[2025-07-27 18:15:47] -rw-------. 1 boincer umatlas    860160 Jul 27 18:15 result.tar.gz
[2025-07-27 18:15:47] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 18:15 runtime_log.err
[2025-07-27 18:15:47] -rw-------. 1 boincer umatlas       652 Jul 27 18:15 EMLKDmWGG07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfJVLDmh2OUYm.diag
[2025-07-27 18:15:47] -rw-r--r--. 1 boincer umatlas     22565 Jul 27 18:15 stderr.txt
[2025-07-27 18:15:47] HITS file was successfully produced:
[2025-07-27 18:15:47] -rw-------. 1 boincer umatlas 203901118 Jul 27 18:14 shared/HITS.pool.root.1
[2025-07-27 18:15:47]  *** Contents of shared directory: ***
[2025-07-27 18:15:47] total 423868
[2025-07-27 18:15:47] -rw-r--r--. 2 boincer umatlas 228706552 Jul 27 16:43 ATLAS.root_0
[2025-07-27 18:15:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 16:43 start_atlas.sh
[2025-07-27 18:15:47] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 16:43 input.tar.gz
[2025-07-27 18:15:47] -rw-------. 1 boincer umatlas 203901118 Jul 27 18:14 HITS.pool.root.1
[2025-07-27 18:15:47] -rw-------. 1 boincer umatlas    860160 Jul 27 18:15 result.tar.gz
18:15:48 (2593816): run_atlas exited; CPU time 36795.879665
18:15:48 (2593816): called boinc_finish(0)

</stderr_txt>
]]>

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