Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:33:41 (16813): wrapper (7.7.26015): starting
16:33:41 (16813): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 16:33:41] Arguments: --nthreads 12
[2025-07-27 16:33:41] Threads: 12
[2025-07-27 16:33:41] Checking for CVMFS
[2025-07-27 16:33:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 16:33:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 16:33:42] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 16:33:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 16:33:42] 2.11.2.0 3081 112440 101364 148823 3 59 14896427 20275201 1 130560 0 38579451 99.970 9646884 10538 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 16:33:42] CVMFS is ok
[2025-07-27 16:33:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 16:33:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 16:33:42] Further information can be found at the LHC@home message board.
[2025-07-27 16:33:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 16:33:42] Checking for apptainer binary...
[2025-07-27 16:33:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 16:33:42] Running /usr/bin/apptainer --version
[2025-07-27 16:33:42] apptainer version 1.3.2-1.el7
[2025-07-27 16:33:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 16:33:43] c-205-29.aglt2.org
[2025-07-27 16:33:43] apptainer works
[2025-07-27 16:33:43] Set ATHENA_PROC_NUMBER=12
[2025-07-27 16:33:43] Set ATHENA_CORE_NUMBER=12
[2025-07-27 16:33:43] Starting ATLAS job with PandaID=6747579427
[2025-07-27 16:33:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 17:56:33]  *** The last 200 lines of the pilot log: ***
[2025-07-27 17:56:33]  is_tar=False
[2025-07-27 17:56:33]  lfn=log.45743349._053613.job.log.tgz.1
[2025-07-27 17:56:33]  mtime=0
[2025-07-27 17:56:33]  protocol_id=None
[2025-07-27 17:56:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 17:56:33]  replicas=None
[2025-07-27 17:56:33]  scope=mc23_13p6TeV
[2025-07-27 17:56:33]  status=None
[2025-07-27 17:56:33]  status_code=0
[2025-07-27 17:56:33]  storage_token=
[2025-07-27 17:56:33]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747579427/log.45743349._053613.job.log.tgz.1
[2025-07-27 17:56:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a3/66/log.45743349._053613.job.log.tgz.1
[2025-07-27 17:56:33]  workdir=None
[2025-07-27 17:56:33] ]
[2025-07-27 17:56:33] 2025-07-27 21:55:54,466 | INFO     | transferring file log.45743349._053613.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747579427/log.45743349._053613.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 17:56:33] 2025-07-27 21:55:54,466 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747579427/log.45743349._053613.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._053613.job
[2025-07-27 17:56:33] 2025-07-27 21:55:54,489 | INFO     | adding to output.list: log.45743349._053613.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a3/66/log.45743349._053613.job.log.tg
[2025-07-27 17:56:33] 2025-07-27 21:55:54,490 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 17:56:33] 2025-07-27 21:55:54,490 | INFO     | summary of transferred files:
[2025-07-27 17:56:33] 2025-07-27 21:55:54,490 | INFO     |  -- lfn=log.45743349._053613.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 17:56:33] 2025-07-27 21:55:54,491 | INFO     | stage-out finished correctly
[2025-07-27 17:56:33] 2025-07-27 21:55:54,756 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 17:56:33] 2025-07-27 21:55:55,683 | INFO     | monitor loop #368: job 0:6747579427 is in state 'finished'
[2025-07-27 17:56:33] 2025-07-27 21:55:55,683 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:56:33] 2025-07-27 21:55:56,641 | INFO     | job 6747579427 has state=finished
[2025-07-27 17:56:33] 2025-07-27 21:55:56,642 | INFO     | preparing for final server update for job 6747579427 in state='finished'
[2025-07-27 17:56:33] 2025-07-27 21:55:56,642 | INFO     | this job has now completed (state=finished)
[2025-07-27 17:56:33] 2025-07-27 21:55:56,642 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 17:56:33] 2025-07-27 21:55:56,643 | INFO     | log transfer has been attempted: DONE
[2025-07-27 17:56:33] 2025-07-27 21:55:56,643 | INFO     | job 6747579427 has finished - writing final server update
[2025-07-27 17:56:33] 2025-07-27 21:55:56,643 | INFO     | total number of processed events: 400 (read)
[2025-07-27 17:56:33] 2025-07-27 21:55:56,644 | INFO     | executing command: lscpu
[2025-07-27 17:56:33] 2025-07-27 21:55:56,670 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 17:56:33] 2025-07-27 21:55:58,185 | INFO     | monitor loop #369: job 0:6747579427 is in state 'finished'
[2025-07-27 17:56:33] 2025-07-27 21:55:58,186 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:56:33] 2025-07-27 21:56:00,694 | INFO     | monitor loop #370: job 0:6747579427 is in state 'finished'
[2025-07-27 17:56:33] 2025-07-27 21:56:00,694 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:56:33] 2025-07-27 21:56:01,799 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 17:56:33] 2025-07-27 21:56:01,802 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-07-27 17:56:33] 2025-07-27 21:56:01,804 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747579427/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:56:33] 2025-07-27 21:56:01,805 | INFO     | extracted standard info from prmon json
[2025-07-27 17:56:33] 2025-07-27 21:56:01,805 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 17:56:33] 2025-07-27 21:56:01,805 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 17:56:33] 2025-07-27 21:56:01,806 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 17:56:33] 2025-07-27 21:56:01,806 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 17:56:33] 2025-07-27 21:56:01,807 | INFO     | fitting pss+swap vs Time
[2025-07-27 17:56:33] 2025-07-27 21:56:01,808 | INFO     | sum of square deviations: 125630262.5
[2025-07-27 17:56:33] 2025-07-27 21:56:01,808 | INFO     | sum of deviations: -6327074330.000003
[2025-07-27 17:56:33] 2025-07-27 21:56:01,808 | INFO     | mean x: 1753650999.5
[2025-07-27 17:56:33] 2025-07-27 21:56:01,808 | INFO     | mean y: 2784711.4324324327
[2025-07-27 17:56:33] 2025-07-27 21:56:01,808 | INFO     | -- intersect: 88321315628.41827
[2025-07-27 17:56:33] 2025-07-27 21:56:01,808 | INFO     | intersect: 88321315628.41827
[2025-07-27 17:56:33] 2025-07-27 21:56:01,809 | INFO     | chi2: 0.19201497757383082
[2025-07-27 17:56:33] 2025-07-27 21:56:01,809 | INFO     | -- intersect: 88321315628.41827
[2025-07-27 17:56:33] 2025-07-27 21:56:01,809 | INFO     | current memory leak: -50.36 B/s (using 74 data points, chi2=0.19)
[2025-07-27 17:56:33] 2025-07-27 21:56:01,809 | INFO     | could have reported an average CPU frequency of 2034 MHz (6 samples)
[2025-07-27 17:56:33] 2025-07-27 21:56:01,809 | INFO     | ..............................
[2025-07-27 17:56:33] 2025-07-27 21:56:01,809 | INFO     | . Timing measurements:
[2025-07-27 17:56:33] 2025-07-27 21:56:01,809 | INFO     | . get job = 0 s
[2025-07-27 17:56:33] 2025-07-27 21:56:01,810 | INFO     | . initial setup = 2 s
[2025-07-27 17:56:33] 2025-07-27 21:56:01,810 | INFO     | . payload setup = 9 s
[2025-07-27 17:56:33] 2025-07-27 21:56:01,810 | INFO     | . stage-in = 0 s
[2025-07-27 17:56:33] 2025-07-27 21:56:01,810 | INFO     | . payload execution = 4887 s
[2025-07-27 17:56:33] 2025-07-27 21:56:01,810 | INFO     | . stage-out = 0 s
[2025-07-27 17:56:33] 2025-07-27 21:56:01,810 | INFO     | . log creation = 0 s
[2025-07-27 17:56:33] 2025-07-27 21:56:01,810 | INFO     | ..............................
[2025-07-27 17:56:33] 2025-07-27 21:56:01,893 | INFO     | 
[2025-07-27 17:56:33] 2025-07-27 21:56:01,893 | INFO     | job summary report
[2025-07-27 17:56:33] 2025-07-27 21:56:01,893 | INFO     | --------------------------------------------------
[2025-07-27 17:56:33] 2025-07-27 21:56:01,893 | INFO     | PanDA job id: 6747579427
[2025-07-27 17:56:33] 2025-07-27 21:56:01,894 | INFO     | task id: 45743349
[2025-07-27 17:56:33] 2025-07-27 21:56:01,894 | INFO     | errors: (none)
[2025-07-27 17:56:33] 2025-07-27 21:56:01,894 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 17:56:33] 2025-07-27 21:56:01,894 | INFO     | pilot state: finished 
[2025-07-27 17:56:33] 2025-07-27 21:56:01,894 | INFO     | transexitcode: 0
[2025-07-27 17:56:33] 2025-07-27 21:56:01,894 | INFO     | exeerrorcode: 0
[2025-07-27 17:56:33] 2025-07-27 21:56:01,894 | INFO     | exeerrordiag: 
[2025-07-27 17:56:33] 2025-07-27 21:56:01,894 | INFO     | exitcode: 0
[2025-07-27 17:56:33] 2025-07-27 21:56:01,894 | INFO     | exitmsg: OK
[2025-07-27 17:56:33] 2025-07-27 21:56:01,895 | INFO     | cpuconsumptiontime: 51664 s
[2025-07-27 17:56:33] 2025-07-27 21:56:01,895 | INFO     | nevents: 400
[2025-07-27 17:56:33] 2025-07-27 21:56:01,895 | INFO     | neventsw: 0
[2025-07-27 17:56:33] 2025-07-27 21:56:01,895 | INFO     | pid: 26867
[2025-07-27 17:56:33] 2025-07-27 21:56:01,895 | INFO     | pgrp: 26867
[2025-07-27 17:56:33] 2025-07-27 21:56:01,895 | INFO     | corecount: 12
[2025-07-27 17:56:33] 2025-07-27 21:56:01,895 | INFO     | event service: False
[2025-07-27 17:56:33] 2025-07-27 21:56:01,895 | INFO     | sizes: {0: 2396647, 1: 2397503, 6: 2397765, 12: 2397793, 4901: 2424047, 4902: 2433229, 4909: 2433367}
[2025-07-27 17:56:33] 2025-07-27 21:56:01,895 | INFO     | --------------------------------------------------
[2025-07-27 17:56:33] 2025-07-27 21:56:01,895 | INFO     | 
[2025-07-27 17:56:33] 2025-07-27 21:56:01,896 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 17:56:33] 2025-07-27 21:56:01,919 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,920 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,920 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,920 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,920 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,920 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,921 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,921 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,921 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,921 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,921 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,921 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,922 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,922 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,922 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,922 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,922 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 17:56:33] 2025-07-27 21:56:01,922 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,923 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 17:56:33] 2025-07-27 21:56:01,923 | INFO     | job 6747579427 has completed (purged errors)
[2025-07-27 17:56:33] 2025-07-27 21:56:01,923 | INFO     | overall cleanup function is called
[2025-07-27 17:56:33] 2025-07-27 21:56:02,931 | INFO     | --- collectZombieJob: --- 10, [26867]
[2025-07-27 17:56:33] 2025-07-27 21:56:02,931 | INFO     | zombie collector waiting for pid 26867
[2025-07-27 17:56:33] 2025-07-27 21:56:02,931 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 17:56:33] 2025-07-27 21:56:02,931 | INFO     | collected zombie processes
[2025-07-27 17:56:33] 2025-07-27 21:56:02,931 | INFO     | will attempt to kill all subprocesses of pid=26867
[2025-07-27 17:56:33] 2025-07-27 21:56:03,020 | INFO     | process IDs to be killed: [26867] (in reverse order)
[2025-07-27 17:56:33] 2025-07-27 21:56:03,075 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 17:56:33] 2025-07-27 21:56:03,075 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 17:56:33] 2025-07-27 21:56:03,079 | INFO     | did not find any defunct processes belonging to 26867
[2025-07-27 17:56:33] 2025-07-27 21:56:03,082 | INFO     | did not find any defunct processes belonging to 26867
[2025-07-27 17:56:33] 2025-07-27 21:56:03,083 | INFO     | ready for new job
[2025-07-27 17:56:33] 2025-07-27 21:56:03,083 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 17:56:33] 2025-07-27 21:56:03,084 | INFO     | ***************************************
[2025-07-27 17:56:33] 2025-07-27 21:56:03,084 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 17:56:33] 2025-07-27 21:56:03,085 | INFO     | ***************************************
[2025-07-27 17:56:33] 2025-07-27 21:56:03,085 | INFO     | 
[2025-07-27 17:56:33] 2025-07-27 21:56:03,085 | INFO     | architecture information:
[2025-07-27 17:56:33] 2025-07-27 21:56:03,086 | INFO     | executing command: cat /etc/os-release
[2025-07-27 17:56:33] 2025-07-27 21:56:03,102 | INFO     | cat /etc/os-release:
[2025-07-27 17:56:33] NAME="CentOS Linux"
[2025-07-27 17:56:33] VERSION="7 (Core)"
[2025-07-27 17:56:33] ID="centos"
[2025-07-27 17:56:33] ID_LIKE="rhel fedora"
[2025-07-27 17:56:33] VERSION_ID="7"
[2025-07-27 17:56:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 17:56:33] ANSI_COLOR="0;31"
[2025-07-27 17:56:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 17:56:33] HOME_URL="https://www.centos.org/"
[2025-07-27 17:56:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 17:56:33] 
[2025-07-27 17:56:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 17:56:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 17:56:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 17:56:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 17:56:33] 
[2025-07-27 17:56:33] 2025-07-27 21:56:03,102 | INFO     | ***************************************
[2025-07-27 17:56:33] 2025-07-27 21:56:03,605 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 17:56:33] 2025-07-27 21:56:03,621 | INFO     | sufficient remaining disk space (29516365824 B)
[2025-07-27 17:56:33] 2025-07-27 21:56:03,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 17:56:33] 2025-07-27 21:56:03,630 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 17:56:33] 2025-07-27 21:56:03,630 | INFO     | update_server=False
[2025-07-27 17:56:33] 2025-07-27 21:56:03,630 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 17:56:33] 2025-07-27 21:56:03,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:56:33] 2025-07-27 21:56:04,058 | INFO     | all data control threads have been joined
[2025-07-27 17:56:33] 2025-07-27 21:56:04,203 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:56:33] 2025-07-27 21:56:04,203 | INFO     | aborting loop
[2025-07-27 17:56:33] 2025-07-27 21:56:04,410 | INFO     | all payload control threads have been joined
[2025-07-27 17:56:33] 2025-07-27 21:56:04,636 | INFO     | [job] retrieve thread has finished
[2025-07-27 17:56:33] 2025-07-27 21:56:04,637 | INFO     | [job] queue monitor thread has finished
[2025-07-27 17:56:33] 2025-07-27 21:56:04,817 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 17:56:33] 2025-07-27 21:56:04,911 | INFO     | [data] copytool_in thread has finished
[2025-07-27 17:56:33] 2025-07-27 21:56:05,046 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 17:56:33] 2025-07-27 21:56:05,064 | INFO     | [data] control thread has finished
[2025-07-27 17:56:33] 2025-07-27 21:56:05,089 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 17:56:33] 2025-07-27 21:56:05,208 | INFO     | [job] job monitor thread has finished
[2025-07-27 17:56:33] 2025-07-27 21:56:05,209 | INFO     | all job control threads have been joined
[2025-07-27 17:56:33] 2025-07-27 21:56:05,352 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 17:56:33] 2025-07-27 21:56:05,369 | INFO     | [payload] failed_post thread has finished
[2025-07-27 17:56:33] 2025-07-27 21:56:05,416 | INFO     | [payload] control thread has finished
[2025-07-27 17:56:33] 2025-07-27 21:56:05,934 | INFO     | [payload] validate_post thread has finished
[2025-07-27 17:56:33] 2025-07-27 21:56:06,032 | INFO     | [job] validate thread has finished
[2025-07-27 17:56:33] 2025-07-27 21:56:06,039 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 17:56:33] 2025-07-27 21:56:06,214 | INFO     | [job] control thread has finished
[2025-07-27 17:56:33] 2025-07-27 21:56:07,095 | INFO     | [data] copytool_out thread has finished
[2025-07-27 17:56:33] 2025-07-27 21:56:09,356 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 17:56:33] 2025-07-27 21:56:14,461 | INFO     | job.realtimelogging is not enabled
[2025-07-27 17:56:33] 2025-07-27 21:56:15,466 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 17:56:33] 2025-07-27 21:56:16,087 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139853814581056)>', '<ExcThread(monitor, started 139853354215168)>']
[2025-07-27 17:56:33] 2025-07-27 21:56:21,113 | INFO     | all workflow threads have been joined
[2025-07-27 17:56:33] 2025-07-27 21:56:21,113 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 17:56:33] 2025-07-27 21:56:21,113 | INFO     | traces error code: 0
[2025-07-27 17:56:33] 2025-07-27 21:56:21,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 17:56:33] 2025-07-27 21:56:33,589 | INFO     | PID=20412 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 17:56:33] 2025-07-27 21:56:33,590 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 17:56:33] 2025-07-27 21:56:33,590 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 17:56:33] 2025-07-27 21:56:33,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 17:56:33] 2025-07-27 21:56:33,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 17:56:33] 2025-07-27 21:56:33,590 | INFO     | [monitor] control thread has ended
[2025-07-27 17:56:33] 2025-07-27 21:56:33,683 [wrapper] ==== pilot stdout END ====
[2025-07-27 17:56:33] 2025-07-27 21:56:33,687 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 17:56:33] 2025-07-27 21:56:33,691 [wrapper] pilotpid: 20412
[2025-07-27 17:56:33] 2025-07-27 21:56:33,695 [wrapper] Pilot exit status: 0
[2025-07-27 17:56:33] 2025-07-27 21:56:33,709 [wrapper] pandaids: 6747579427
[2025-07-27 17:56:33] 2025-07-27 21:56:33,748 [wrapper] cleanup supervisor_pilot  7842 20413
[2025-07-27 17:56:33] 2025-07-27 21:56:33,752 [wrapper] Test setup, not cleaning
[2025-07-27 17:56:33] 2025-07-27 21:56:33,756 [wrapper] apfmon messages muted
[2025-07-27 17:56:33] 2025-07-27 21:56:33,760 [wrapper] ==== wrapper stdout END ====
[2025-07-27 17:56:33] 2025-07-27 21:56:33,764 [wrapper] ==== wrapper stderr END ====
[2025-07-27 17:56:33]  *** Error codes and diagnostics ***
[2025-07-27 17:56:33]     "exeErrorCode": 0,
[2025-07-27 17:56:33]     "exeErrorDiag": "",
[2025-07-27 17:56:33]     "pilotErrorCode": 0,
[2025-07-27 17:56:33]     "pilotErrorDiag": "",
[2025-07-27 17:56:33]  *** Listing of results directory ***
[2025-07-27 17:56:33] total 349128
[2025-07-27 17:56:33] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 14:08 pilot3.tar.gz
[2025-07-27 17:56:33] -rwx------ 1 boincer umatlas     36292 Jul 27 14:12 runpilot2-wrapper.sh
[2025-07-27 17:56:33] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 14:12 queuedata.json
[2025-07-27 17:56:33] -rw-r--r-- 1 boincer umatlas       100 Jul 27 16:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 17:56:33] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 16:33 run_atlas
[2025-07-27 17:56:33] -rw-r--r-- 1 boincer umatlas       105 Jul 27 16:33 job.xml
[2025-07-27 17:56:33] -rw-r--r-- 2 boincer umatlas 148033171 Jul 27 16:33 EVNT.45743347._002936.pool.root.1
[2025-07-27 17:56:33] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 16:33 start_atlas.sh
[2025-07-27 17:56:33] drwxrwx--x 2 boincer umatlas      4096 Jul 27 16:33 shared
[2025-07-27 17:56:33] -rw-r--r-- 2 boincer umatlas    542895 Jul 27 16:33 input.tar.gz
[2025-07-27 17:56:33] -rw-r--r-- 1 boincer umatlas         0 Jul 27 16:33 boinc_lockfile
[2025-07-27 17:56:33] -rw-r--r-- 1 boincer umatlas      2563 Jul 27 16:33 pandaJob.out
[2025-07-27 17:56:33] -rw------- 1 boincer umatlas    980109 Jul 27 16:33 agis_schedconf.cvmfs.json
[2025-07-27 17:56:33] -rw------- 1 boincer umatlas   1593052 Jul 27 16:33 agis_ddmendpoints.agis.ALL.json
[2025-07-27 17:56:33] drwx------ 4 boincer umatlas      4096 Jul 27 16:33 pilot3
[2025-07-27 17:56:33] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 17:45 init_data.xml
[2025-07-27 17:56:33] -rw------- 1 boincer umatlas 203934990 Jul 27 17:55 HITS.45743349._053613.pool.root.1
[2025-07-27 17:56:33] -rw------- 1 boincer umatlas      1049 Jul 27 17:55 memory_monitor_summary.json
[2025-07-27 17:56:33] -rw------- 1 boincer umatlas    365682 Jul 27 17:55 log.45743349._053613.job.log.tgz.1
[2025-07-27 17:56:33] -rw------- 1 boincer umatlas        95 Jul 27 17:55 pilot_heartbeat.json
[2025-07-27 17:56:33] -rw-r--r-- 1 boincer umatlas       529 Jul 27 17:56 boinc_task_state.xml
[2025-07-27 17:56:33] -rw------- 1 boincer umatlas      7854 Jul 27 17:56 heartbeat.json
[2025-07-27 17:56:33] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 17:56 boinc_mmap_file
[2025-07-27 17:56:33] -rw-r--r-- 1 boincer umatlas        27 Jul 27 17:56 wrapper_checkpoint.txt
[2025-07-27 17:56:33] -rw------- 1 boincer umatlas       745 Jul 27 17:56 pilotlog.txt
[2025-07-27 17:56:33] -rw------- 1 boincer umatlas    468439 Jul 27 17:56 log.45743349._053613.job.log.1
[2025-07-27 17:56:33] -rw------- 1 boincer umatlas       357 Jul 27 17:56 output.list
[2025-07-27 17:56:33] -rw-r--r-- 1 boincer umatlas       620 Jul 27 17:56 runtime_log
[2025-07-27 17:56:33] -rw------- 1 boincer umatlas    849920 Jul 27 17:56 result.tar.gz
[2025-07-27 17:56:33] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 17:56 runtime_log.err
[2025-07-27 17:56:33] -rw------- 1 boincer umatlas       659 Jul 27 17:56 0W7NDmo2K07n9Rq4apOajLDm4fhM0noT9bVof3QYDmwv2KDmpsPn5m.diag
[2025-07-27 17:56:33] -rw-r--r-- 1 boincer umatlas     21562 Jul 27 17:56 stderr.txt
[2025-07-27 17:56:33] HITS file was successfully produced:
[2025-07-27 17:56:33] -rw------- 1 boincer umatlas 203934990 Jul 27 17:55 shared/HITS.pool.root.1
[2025-07-27 17:56:33]  *** Contents of shared directory: ***
[2025-07-27 17:56:33] total 345104
[2025-07-27 17:56:33] -rw-r--r-- 2 boincer umatlas 148033171 Jul 27 16:33 ATLAS.root_0
[2025-07-27 17:56:33] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 16:33 start_atlas.sh
[2025-07-27 17:56:33] -rw-r--r-- 2 boincer umatlas    542895 Jul 27 16:33 input.tar.gz
[2025-07-27 17:56:33] -rw------- 1 boincer umatlas 203934990 Jul 27 17:55 HITS.pool.root.1
[2025-07-27 17:56:33] -rw------- 1 boincer umatlas    849920 Jul 27 17:56 result.tar.gz
17:56:35 (16813): run_atlas exited; CPU time 51649.018744
17:56:35 (16813): called boinc_finish(0)

</stderr_txt>
]]>

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