Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:14:40 (3777783): wrapper (7.7.26015): starting
17:14:40 (3777783): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 17:14:40] Arguments: --nthreads 8
[2025-07-27 17:14:40] Threads: 8
[2025-07-27 17:14:40] Checking for CVMFS
[2025-07-27 17:14:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:14:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:14:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:14:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:14:40] 2.13.0.0 1483043 18907 266868 148825 2 64 33246838 40960000 16682 16776704 0 85230028 99.680 98889250 18860 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 17:14:40] CVMFS is ok
[2025-07-27 17:14:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:14:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:14:40] Further information can be found at the LHC@home message board.
[2025-07-27 17:14:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:14:40] Checking for apptainer binary...
[2025-07-27 17:14:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:14:40] Running /usr/bin/apptainer --version
[2025-07-27 17:14:40] apptainer version 1.4.1-1.el9
[2025-07-27 17:14:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:14:40] c7-4-30.aglt2.org
[2025-07-27 17:14:40] apptainer works
[2025-07-27 17:14:40] Set ATHENA_PROC_NUMBER=8
[2025-07-27 17:14:40] Set ATHENA_CORE_NUMBER=8
[2025-07-27 17:14:40] Starting ATLAS job with PandaID=6747500016
[2025-07-27 17:14:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 18:36:02]  *** The last 200 lines of the pilot log: ***
[2025-07-27 18:36:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-27 18:36:02]  is_altstaged=None
[2025-07-27 18:36:02]  is_tar=False
[2025-07-27 18:36:02]  lfn=log.45743349._051401.job.log.tgz.1
[2025-07-27 18:36:02]  mtime=0
[2025-07-27 18:36:02]  protocol_id=None
[2025-07-27 18:36:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 18:36:02]  replicas=None
[2025-07-27 18:36:02]  scope=mc23_13p6TeV
[2025-07-27 18:36:02]  status=None
[2025-07-27 18:36:02]  status_code=0
[2025-07-27 18:36:02]  storage_token=
[2025-07-27 18:36:02]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6747500016/log.45743349._051401.job.log.tgz.1
[2025-07-27 18:36:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/ec/log.45743349._051401.job.log.tgz.1
[2025-07-27 18:36:02]  workdir=None
[2025-07-27 18:36:02] ]
[2025-07-27 18:36:02] 2025-07-27 22:35:25,266 | INFO     | transferring file log.45743349._051401.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6747500016/log.45743349._051401.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 18:36:02] 2025-07-27 22:35:25,267 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6747500016/log.45743349._051401.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._051401.job
[2025-07-27 18:36:02] 2025-07-27 22:35:25,290 | INFO     | adding to output.list: log.45743349._051401.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/ec/log.45743349._051401.job.log.tg
[2025-07-27 18:36:02] 2025-07-27 22:35:25,291 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 18:36:02] 2025-07-27 22:35:25,291 | INFO     | summary of transferred files:
[2025-07-27 18:36:02] 2025-07-27 22:35:25,291 | INFO     |  -- lfn=log.45743349._051401.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 18:36:02] 2025-07-27 22:35:25,291 | INFO     | stage-out finished correctly
[2025-07-27 18:36:02] 2025-07-27 22:35:25,361 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 18:36:02] 2025-07-27 22:35:25,420 | INFO     | job 6747500016 has state=finished
[2025-07-27 18:36:02] 2025-07-27 22:35:25,421 | INFO     | preparing for final server update for job 6747500016 in state='finished'
[2025-07-27 18:36:02] 2025-07-27 22:35:25,421 | INFO     | this job has now completed (state=finished)
[2025-07-27 18:36:02] 2025-07-27 22:35:25,421 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 18:36:02] 2025-07-27 22:35:25,421 | INFO     | log transfer has been attempted: DONE
[2025-07-27 18:36:02] 2025-07-27 22:35:25,421 | INFO     | job 6747500016 has finished - writing final server update
[2025-07-27 18:36:02] 2025-07-27 22:35:25,422 | INFO     | total number of processed events: 400 (read)
[2025-07-27 18:36:02] 2025-07-27 22:35:25,423 | INFO     | executing command: lscpu
[2025-07-27 18:36:02] 2025-07-27 22:35:25,494 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 18:36:02] 2025-07-27 22:35:28,701 | WARNING  | process 3788521 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 18:36:02] 2025-07-27 22:35:28,701 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747500016/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:36:02] 2025-07-27 22:35:29,123 | INFO     | number of running child processes to parent process 3788521: 1
[2025-07-27 18:36:02] 2025-07-27 22:35:29,123 | INFO     | maximum number of monitored processes: 6
[2025-07-27 18:36:02] 2025-07-27 22:35:30,471 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 18:36:02] 2025-07-27 22:35:30,476 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3083.6406041666664
[2025-07-27 18:36:02] 2025-07-27 22:35:30,490 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747500016/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:36:02] 2025-07-27 22:35:30,491 | INFO     | extracted standard info from prmon json
[2025-07-27 18:36:02] 2025-07-27 22:35:30,491 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 18:36:02] 2025-07-27 22:35:30,491 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 18:36:02] 2025-07-27 22:35:30,492 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 18:36:02] 2025-07-27 22:35:30,492 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 18:36:02] 2025-07-27 22:35:30,493 | INFO     | fitting pss+swap vs Time
[2025-07-27 18:36:02] 2025-07-27 22:35:30,493 | INFO     | sum of square deviations: 115715658.0
[2025-07-27 18:36:02] 2025-07-27 22:35:30,494 | INFO     | sum of deviations: -14130628711.0
[2025-07-27 18:36:02] 2025-07-27 22:35:30,494 | INFO     | mean x: 1753653396.5
[2025-07-27 18:36:02] 2025-07-27 22:35:30,494 | INFO     | mean y: 2456228.75
[2025-07-27 18:36:02] 2025-07-27 22:35:30,494 | INFO     | -- intersect: 214150009481.44437
[2025-07-27 18:36:02] 2025-07-27 22:35:30,494 | INFO     | intersect: 214150009481.44437
[2025-07-27 18:36:02] 2025-07-27 22:35:30,494 | INFO     | chi2: 0.17108141331764415
[2025-07-27 18:36:02] 2025-07-27 22:35:30,494 | INFO     | -- intersect: 214150009481.44437
[2025-07-27 18:36:02] 2025-07-27 22:35:30,494 | INFO     | current memory leak: -122.12 B/s (using 72 data points, chi2=0.17)
[2025-07-27 18:36:02] 2025-07-27 22:35:30,494 | INFO     | could have reported an average CPU frequency of 3036 MHz (6 samples)
[2025-07-27 18:36:02] 2025-07-27 22:35:30,495 | INFO     | ..............................
[2025-07-27 18:36:02] 2025-07-27 22:35:30,495 | INFO     | . Timing measurements:
[2025-07-27 18:36:02] 2025-07-27 22:35:30,495 | INFO     | . get job = 0 s
[2025-07-27 18:36:02] 2025-07-27 22:35:30,495 | INFO     | . initial setup = 2 s
[2025-07-27 18:36:02] 2025-07-27 22:35:30,495 | INFO     | . payload setup = 8 s
[2025-07-27 18:36:02] 2025-07-27 22:35:30,495 | INFO     | . stage-in = 0 s
[2025-07-27 18:36:02] 2025-07-27 22:35:30,495 | INFO     | . payload execution = 4801 s
[2025-07-27 18:36:02] 2025-07-27 22:35:30,495 | INFO     | . stage-out = 0 s
[2025-07-27 18:36:02] 2025-07-27 22:35:30,495 | INFO     | . log creation = 0 s
[2025-07-27 18:36:02] 2025-07-27 22:35:30,495 | INFO     | ..............................
[2025-07-27 18:36:02] 2025-07-27 22:35:30,662 | INFO     | 
[2025-07-27 18:36:02] 2025-07-27 22:35:30,662 | INFO     | job summary report
[2025-07-27 18:36:02] 2025-07-27 22:35:30,662 | INFO     | --------------------------------------------------
[2025-07-27 18:36:02] 2025-07-27 22:35:30,662 | INFO     | PanDA job id: 6747500016
[2025-07-27 18:36:02] 2025-07-27 22:35:30,662 | INFO     | task id: 45743349
[2025-07-27 18:36:02] 2025-07-27 22:35:30,663 | INFO     | errors: (none)
[2025-07-27 18:36:02] 2025-07-27 22:35:30,663 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 18:36:02] 2025-07-27 22:35:30,664 | INFO     | pilot state: finished 
[2025-07-27 18:36:02] 2025-07-27 22:35:30,664 | INFO     | transexitcode: 0
[2025-07-27 18:36:02] 2025-07-27 22:35:30,664 | INFO     | exeerrorcode: 0
[2025-07-27 18:36:02] 2025-07-27 22:35:30,664 | INFO     | exeerrordiag: 
[2025-07-27 18:36:02] 2025-07-27 22:35:30,664 | INFO     | exitcode: 0
[2025-07-27 18:36:02] 2025-07-27 22:35:30,664 | INFO     | exitmsg: OK
[2025-07-27 18:36:02] 2025-07-27 22:35:30,665 | INFO     | cpuconsumptiontime: 35501 s
[2025-07-27 18:36:02] 2025-07-27 22:35:30,665 | INFO     | nevents: 400
[2025-07-27 18:36:02] 2025-07-27 22:35:30,665 | INFO     | neventsw: 0
[2025-07-27 18:36:02] 2025-07-27 22:35:30,665 | INFO     | pid: 3788521
[2025-07-27 18:36:02] 2025-07-27 22:35:30,665 | INFO     | pgrp: 3788521
[2025-07-27 18:36:02] 2025-07-27 22:35:30,665 | INFO     | corecount: 8
[2025-07-27 18:36:02] 2025-07-27 22:35:30,665 | INFO     | event service: False
[2025-07-27 18:36:02] 2025-07-27 22:35:30,665 | INFO     | sizes: {0: 2397475, 6: 2397737, 11: 2397765, 4813: 2423850, 4814: 2432903, 4820: 2433041}
[2025-07-27 18:36:02] 2025-07-27 22:35:30,665 | INFO     | --------------------------------------------------
[2025-07-27 18:36:02] 2025-07-27 22:35:30,665 | INFO     | 
[2025-07-27 18:36:02] 2025-07-27 22:35:30,665 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 18:36:02] 2025-07-27 22:35:30,685 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,685 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,685 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,685 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,685 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,685 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,685 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,685 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,685 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,685 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,685 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,685 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,685 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,685 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,685 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,685 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,685 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,686 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 18:36:02] 2025-07-27 22:35:30,686 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,686 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 18:36:02] 2025-07-27 22:35:30,686 | INFO     | job 6747500016 has completed (purged errors)
[2025-07-27 18:36:02] 2025-07-27 22:35:30,686 | INFO     | overall cleanup function is called
[2025-07-27 18:36:02] 2025-07-27 22:35:31,693 | INFO     | --- collectZombieJob: --- 10, [3788521]
[2025-07-27 18:36:02] 2025-07-27 22:35:31,693 | INFO     | zombie collector waiting for pid 3788521
[2025-07-27 18:36:02] 2025-07-27 22:35:31,693 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 18:36:02] 2025-07-27 22:35:31,693 | INFO     | collected zombie processes
[2025-07-27 18:36:02] 2025-07-27 22:35:31,694 | INFO     | will attempt to kill all subprocesses of pid=3788521
[2025-07-27 18:36:02] 2025-07-27 22:35:32,103 | INFO     | process IDs to be killed: [3788521] (in reverse order)
[2025-07-27 18:36:02] 2025-07-27 22:35:32,237 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 18:36:02] 2025-07-27 22:35:32,237 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 18:36:02] 2025-07-27 22:35:32,252 | INFO     | did not find any defunct processes belonging to 3788521
[2025-07-27 18:36:02] 2025-07-27 22:35:32,269 | INFO     | did not find any defunct processes belonging to 3788521
[2025-07-27 18:36:02] 2025-07-27 22:35:32,270 | INFO     | ready for new job
[2025-07-27 18:36:02] 2025-07-27 22:35:32,270 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 18:36:02] 2025-07-27 22:35:32,272 | INFO     | ***************************************
[2025-07-27 18:36:02] 2025-07-27 22:35:32,272 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 18:36:02] 2025-07-27 22:35:32,272 | INFO     | ***************************************
[2025-07-27 18:36:02] 2025-07-27 22:35:32,272 | INFO     | 
[2025-07-27 18:36:02] 2025-07-27 22:35:32,290 | INFO     | architecture information:
[2025-07-27 18:36:02] 2025-07-27 22:35:32,290 | INFO     | executing command: cat /etc/os-release
[2025-07-27 18:36:02] 2025-07-27 22:35:32,304 | INFO     | cat /etc/os-release:
[2025-07-27 18:36:02] NAME="CentOS Linux"
[2025-07-27 18:36:02] VERSION="7 (Core)"
[2025-07-27 18:36:02] ID="centos"
[2025-07-27 18:36:02] ID_LIKE="rhel fedora"
[2025-07-27 18:36:02] VERSION_ID="7"
[2025-07-27 18:36:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 18:36:02] ANSI_COLOR="0;31"
[2025-07-27 18:36:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 18:36:02] HOME_URL="https://www.centos.org/"
[2025-07-27 18:36:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 18:36:02] 
[2025-07-27 18:36:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 18:36:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 18:36:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 18:36:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 18:36:02] 
[2025-07-27 18:36:02] 2025-07-27 22:35:32,304 | INFO     | ***************************************
[2025-07-27 18:36:02] 2025-07-27 22:35:32,806 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 18:36:02] 2025-07-27 22:35:32,831 | INFO     | sufficient remaining disk space (128794492928 B)
[2025-07-27 18:36:02] 2025-07-27 22:35:32,832 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 18:36:02] 2025-07-27 22:35:32,832 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 18:36:02] 2025-07-27 22:35:32,832 | INFO     | update_server=False
[2025-07-27 18:36:02] 2025-07-27 22:35:32,832 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 18:36:02] 2025-07-27 22:35:32,832 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:36:02] 2025-07-27 22:35:32,832 | INFO     | aborting loop
[2025-07-27 18:36:02] 2025-07-27 22:35:33,114 | INFO     | all data control threads have been joined
[2025-07-27 18:36:02] 2025-07-27 22:35:33,372 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 18:36:02] 2025-07-27 22:35:33,587 | INFO     | all job control threads have been joined
[2025-07-27 18:36:02] 2025-07-27 22:35:33,837 | INFO     | [job] job monitor thread has finished
[2025-07-27 18:36:02] 2025-07-27 22:35:33,837 | INFO     | [job] retrieve thread has finished
[2025-07-27 18:36:02] 2025-07-27 22:35:33,850 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 18:36:02] 2025-07-27 22:35:34,119 | INFO     | [data] control thread has finished
[2025-07-27 18:36:02] 2025-07-27 22:35:34,124 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 18:36:02] 2025-07-27 22:35:34,186 | INFO     | all payload control threads have been joined
[2025-07-27 18:36:02] 2025-07-27 22:35:34,448 | INFO     | [payload] failed_post thread has finished
[2025-07-27 18:36:02] 2025-07-27 22:35:34,592 | INFO     | [job] control thread has finished
[2025-07-27 18:36:02] 2025-07-27 22:35:34,757 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 18:36:02] 2025-07-27 22:35:34,907 | INFO     | [data] copytool_in thread has finished
[2025-07-27 18:36:02] 2025-07-27 22:35:35,128 | INFO     | [job] validate thread has finished
[2025-07-27 18:36:02] 2025-07-27 22:35:35,151 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 18:36:02] 2025-07-27 22:35:35,191 | INFO     | [payload] control thread has finished
[2025-07-27 18:36:02] 2025-07-27 22:35:35,290 | INFO     | [payload] validate_post thread has finished
[2025-07-27 18:36:02] 2025-07-27 22:35:35,377 | INFO     | [data] copytool_out thread has finished
[2025-07-27 18:36:02] 2025-07-27 22:35:35,578 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:36:02] 2025-07-27 22:35:35,928 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 18:36:02] 2025-07-27 22:35:36,584 | INFO     | [job] queue monitor thread has finished
[2025-07-27 18:36:02] 2025-07-27 22:35:39,934 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 18:36:02] 2025-07-27 22:35:40,331 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140424622483264)>', '<ExcThread(monitor, started 140424106710784)>']
[2025-07-27 18:36:02] 2025-07-27 22:35:45,356 | INFO     | all workflow threads have been joined
[2025-07-27 18:36:02] 2025-07-27 22:35:45,356 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 18:36:02] 2025-07-27 22:35:45,356 | INFO     | traces error code: 0
[2025-07-27 18:36:02] 2025-07-27 22:35:45,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 18:36:02] 2025-07-27 22:36:02,533 | INFO     | PID=3781487 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 18:36:02] 2025-07-27 22:36:02,533 | INFO     | .. there are 30 such processes running
[2025-07-27 18:36:02] 2025-07-27 22:36:02,534 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 18:36:02] 2025-07-27 22:36:02,534 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 18:36:02] 2025-07-27 22:36:02,534 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 18:36:02] 2025-07-27 22:36:02,534 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 18:36:02] 2025-07-27 22:36:02,534 | INFO     | [monitor] control thread has ended
[2025-07-27 18:36:02] 2025-07-27 22:36:02,675 [wrapper] ==== pilot stdout END ====
[2025-07-27 18:36:02] 2025-07-27 22:36:02,678 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 18:36:02] 2025-07-27 22:36:02,680 [wrapper] pilotpid: 3781487
[2025-07-27 18:36:02] 2025-07-27 22:36:02,682 [wrapper] Pilot exit status: 0
[2025-07-27 18:36:02] 2025-07-27 22:36:02,700 [wrapper] pandaids: 6747500016
[2025-07-27 18:36:02] 2025-07-27 22:36:02,819 [wrapper] cleanup supervisor_pilot 4131797 3781488
[2025-07-27 18:36:02] 2025-07-27 22:36:02,825 [wrapper] Test setup, not cleaning
[2025-07-27 18:36:02] 2025-07-27 22:36:02,830 [wrapper] apfmon messages muted
[2025-07-27 18:36:02] 2025-07-27 22:36:02,835 [wrapper] ==== wrapper stdout END ====
[2025-07-27 18:36:02] 2025-07-27 22:36:02,838 [wrapper] ==== wrapper stderr END ====
[2025-07-27 18:36:02]  *** Error codes and diagnostics ***
[2025-07-27 18:36:02]     "exeErrorCode": 0,
[2025-07-27 18:36:02]     "exeErrorDiag": "",
[2025-07-27 18:36:02]     "pilotErrorCode": 0,
[2025-07-27 18:36:02]     "pilotErrorDiag": "",
[2025-07-27 18:36:02]  *** Listing of results directory ***
[2025-07-27 18:36:02] total 431000
[2025-07-27 18:36:02] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 10:53 pilot3.tar.gz
[2025-07-27 18:36:02] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 11:21 queuedata.json
[2025-07-27 18:36:02] -rwx------. 1 boincer umatlas     36292 Jul 27 11:22 runpilot2-wrapper.sh
[2025-07-27 18:36:02] -rw-r--r--. 1 boincer umatlas       100 Jul 27 17:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 18:36:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 17:14 run_atlas
[2025-07-27 18:36:02] -rw-r--r--. 1 boincer umatlas       105 Jul 27 17:14 job.xml
[2025-07-27 18:36:02] -rw-r--r--. 2 boincer umatlas 230954411 Jul 27 17:14 EVNT.45743347._002753.pool.root.1
[2025-07-27 18:36:02] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:14 start_atlas.sh
[2025-07-27 18:36:02] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 17:14 shared
[2025-07-27 18:36:02] -rw-r--r--. 2 boincer umatlas    542903 Jul 27 17:14 input.tar.gz
[2025-07-27 18:36:02] -rw-r--r--. 1 boincer umatlas         0 Jul 27 17:14 boinc_lockfile
[2025-07-27 18:36:02] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 17:14 pandaJob.out
[2025-07-27 18:36:02] -rw-------. 1 boincer umatlas    980117 Jul 27 17:14 agis_schedconf.cvmfs.json
[2025-07-27 18:36:02] -rw-------. 1 boincer umatlas   1593052 Jul 27 17:14 agis_ddmendpoints.agis.ALL.json
[2025-07-27 18:36:02] drwx------. 4 boincer umatlas      4096 Jul 27 17:14 pilot3
[2025-07-27 18:36:02] -rw-r--r--. 1 boincer umatlas      6935 Jul 27 18:27 init_data.xml
[2025-07-27 18:36:02] -rw-------. 1 boincer umatlas 204989729 Jul 27 18:34 HITS.45743349._051401.pool.root.1
[2025-07-27 18:36:02] -rw-r--r--. 1 boincer umatlas       529 Jul 27 18:34 boinc_task_state.xml
[2025-07-27 18:36:02] -rw-------. 1 boincer umatlas        95 Jul 27 18:35 pilot_heartbeat.json
[2025-07-27 18:36:02] -rw-------. 1 boincer umatlas      1027 Jul 27 18:35 memory_monitor_summary.json
[2025-07-27 18:36:02] -rw-------. 1 boincer umatlas    292759 Jul 27 18:35 log.45743349._051401.job.log.tgz.1
[2025-07-27 18:36:02] -rw-------. 1 boincer umatlas      7771 Jul 27 18:35 heartbeat.json
[2025-07-27 18:36:02] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 18:35 boinc_mmap_file
[2025-07-27 18:36:02] -rw-r--r--. 1 boincer umatlas        27 Jul 27 18:35 wrapper_checkpoint.txt
[2025-07-27 18:36:02] -rw-------. 1 boincer umatlas       823 Jul 27 18:36 pilotlog.txt
[2025-07-27 18:36:02] -rw-------. 1 boincer umatlas    469581 Jul 27 18:36 log.45743349._051401.job.log.1
[2025-07-27 18:36:02] -rw-------. 1 boincer umatlas       357 Jul 27 18:36 output.list
[2025-07-27 18:36:02] -rw-r--r--. 1 boincer umatlas       620 Jul 27 18:36 runtime_log
[2025-07-27 18:36:02] -rw-------. 1 boincer umatlas    778240 Jul 27 18:36 result.tar.gz
[2025-07-27 18:36:02] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 18:36 runtime_log.err
[2025-07-27 18:36:02] -rw-------. 1 boincer umatlas       652 Jul 27 18:36 OZ7KDmXNI07n9Rq4apOajLDm4fhM0noT9bVof3QYDmBk2KDm9o3r5n.diag
[2025-07-27 18:36:02] -rw-r--r--. 1 boincer umatlas     21444 Jul 27 18:36 stderr.txt
[2025-07-27 18:36:02] HITS file was successfully produced:
[2025-07-27 18:36:02] -rw-------. 1 boincer umatlas 204989729 Jul 27 18:34 shared/HITS.pool.root.1
[2025-07-27 18:36:02]  *** Contents of shared directory: ***
[2025-07-27 18:36:02] total 427048
[2025-07-27 18:36:02] -rw-r--r--. 2 boincer umatlas 230954411 Jul 27 17:14 ATLAS.root_0
[2025-07-27 18:36:02] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:14 start_atlas.sh
[2025-07-27 18:36:02] -rw-r--r--. 2 boincer umatlas    542903 Jul 27 17:14 input.tar.gz
[2025-07-27 18:36:02] -rw-------. 1 boincer umatlas 204989729 Jul 27 18:34 HITS.pool.root.1
[2025-07-27 18:36:02] -rw-------. 1 boincer umatlas    778240 Jul 27 18:36 result.tar.gz
18:36:04 (3777783): run_atlas exited; CPU time 35680.464139
18:36:04 (3777783): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN