Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:28:05 (3017837): wrapper (7.7.26015): starting
16:28:05 (3017837): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 16:28:05] Arguments: --nthreads 10
[2025-07-27 16:28:05] Threads: 10
[2025-07-27 16:28:05] Checking for CVMFS
[2025-07-27 16:28:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 16:28:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 16:28:05] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 16:28:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 16:28:06] 2.13.1.0 128731 5590 114748 148823 2 199 17892301 39288832 4122 16776704 0 5607786 99.715 6770814 39532 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 16:28:06] CVMFS is ok
[2025-07-27 16:28:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 16:28:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 16:28:06] Further information can be found at the LHC@home message board.
[2025-07-27 16:28:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 16:28:06] Checking for apptainer binary...
[2025-07-27 16:28:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 16:28:06] Running /usr/bin/apptainer --version
[2025-07-27 16:28:06] apptainer version 1.4.1-1.el9
[2025-07-27 16:28:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 16:28:06] c-210-25.aglt2.org
[2025-07-27 16:28:06] apptainer works
[2025-07-27 16:28:06] Set ATHENA_PROC_NUMBER=10
[2025-07-27 16:28:06] Set ATHENA_CORE_NUMBER=10
[2025-07-27 16:28:06] Starting ATLAS job with PandaID=6747579284
[2025-07-27 16:28:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 18:02:46]  *** The last 200 lines of the pilot log: ***
[2025-07-27 18:02:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 18:02:46]  replicas=None
[2025-07-27 18:02:46]  scope=mc23_13p6TeV
[2025-07-27 18:02:46]  status=None
[2025-07-27 18:02:46]  status_code=0
[2025-07-27 18:02:46]  storage_token=
[2025-07-27 18:02:46]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747579284/log.45743349._053470.job.log.tgz.1
[2025-07-27 18:02:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/d7/log.45743349._053470.job.log.tgz.1
[2025-07-27 18:02:46]  workdir=None
[2025-07-27 18:02:46] ]
[2025-07-27 18:02:46] 2025-07-27 22:02:06,991 | INFO     | transferring file log.45743349._053470.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747579284/log.45743349._053470.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 18:02:46] 2025-07-27 22:02:06,991 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747579284/log.45743349._053470.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._053470.job
[2025-07-27 18:02:46] 2025-07-27 22:02:07,011 | INFO     | adding to output.list: log.45743349._053470.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/d7/log.45743349._053470.job.log.tg
[2025-07-27 18:02:46] 2025-07-27 22:02:07,012 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 18:02:46] 2025-07-27 22:02:07,012 | INFO     | summary of transferred files:
[2025-07-27 18:02:46] 2025-07-27 22:02:07,012 | INFO     |  -- lfn=log.45743349._053470.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 18:02:46] 2025-07-27 22:02:07,012 | INFO     | stage-out finished correctly
[2025-07-27 18:02:46] 2025-07-27 22:02:10,070 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 18:02:46] 2025-07-27 22:02:10,163 | INFO     | job 6747579284 has state=finished
[2025-07-27 18:02:46] 2025-07-27 22:02:10,164 | INFO     | preparing for final server update for job 6747579284 in state='finished'
[2025-07-27 18:02:46] 2025-07-27 22:02:10,165 | INFO     | this job has now completed (state=finished)
[2025-07-27 18:02:46] 2025-07-27 22:02:10,165 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 18:02:46] 2025-07-27 22:02:10,165 | INFO     | log transfer has been attempted: DONE
[2025-07-27 18:02:46] 2025-07-27 22:02:10,165 | INFO     | job 6747579284 has finished - writing final server update
[2025-07-27 18:02:46] 2025-07-27 22:02:10,165 | INFO     | total number of processed events: 400 (read)
[2025-07-27 18:02:46] 2025-07-27 22:02:10,166 | INFO     | executing command: lscpu
[2025-07-27 18:02:46] 2025-07-27 22:02:10,198 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 18:02:46] 2025-07-27 22:02:11,027 | WARNING  | process 3029050 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 18:02:46] 2025-07-27 22:02:11,028 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747579284/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:02:46] 2025-07-27 22:02:11,228 | INFO     | number of running child processes to parent process 3029050: 1
[2025-07-27 18:02:46] 2025-07-27 22:02:11,228 | INFO     | maximum number of monitored processes: 6
[2025-07-27 18:02:46] 2025-07-27 22:02:13,731 | INFO     | monitor loop #421: job 0:6747579284 is in state 'finished'
[2025-07-27 18:02:46] 2025-07-27 22:02:13,731 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:02:46] 2025-07-27 22:02:13,838 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 18:02:46] 2025-07-27 22:02:13,842 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1855750000004
[2025-07-27 18:02:46] 2025-07-27 22:02:13,847 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747579284/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:02:46] 2025-07-27 22:02:13,847 | INFO     | extracted standard info from prmon json
[2025-07-27 18:02:46] 2025-07-27 22:02:13,848 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 18:02:46] 2025-07-27 22:02:13,848 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 18:02:46] 2025-07-27 22:02:13,848 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 18:02:46] 2025-07-27 22:02:13,848 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 18:02:46] 2025-07-27 22:02:13,850 | INFO     | fitting pss+swap vs Time
[2025-07-27 18:02:46] 2025-07-27 22:02:13,850 | INFO     | sum of square deviations: 190403570.0
[2025-07-27 18:02:46] 2025-07-27 22:02:13,850 | INFO     | sum of deviations: -21315358588.000004
[2025-07-27 18:02:46] 2025-07-27 22:02:13,850 | INFO     | mean x: 1753650990.0
[2025-07-27 18:02:46] 2025-07-27 22:02:13,850 | INFO     | mean y: 2848973.694117647
[2025-07-27 18:02:46] 2025-07-27 22:02:13,851 | INFO     | -- intersect: 196321120159.7397
[2025-07-27 18:02:46] 2025-07-27 22:02:13,851 | INFO     | intersect: 196321120159.7397
[2025-07-27 18:02:46] 2025-07-27 22:02:13,851 | INFO     | chi2: 0.13060295166827798
[2025-07-27 18:02:46] 2025-07-27 22:02:13,851 | INFO     | -- intersect: 196321120159.7397
[2025-07-27 18:02:46] 2025-07-27 22:02:13,851 | INFO     | current memory leak: -111.95 B/s (using 85 data points, chi2=0.13)
[2025-07-27 18:02:46] 2025-07-27 22:02:13,852 | INFO     | could have reported an average CPU frequency of 2611 MHz (7 samples)
[2025-07-27 18:02:46] 2025-07-27 22:02:13,852 | INFO     | ..............................
[2025-07-27 18:02:46] 2025-07-27 22:02:13,852 | INFO     | . Timing measurements:
[2025-07-27 18:02:46] 2025-07-27 22:02:13,852 | INFO     | . get job = 0 s
[2025-07-27 18:02:46] 2025-07-27 22:02:13,852 | INFO     | . initial setup = 2 s
[2025-07-27 18:02:46] 2025-07-27 22:02:13,852 | INFO     | . payload setup = 6 s
[2025-07-27 18:02:46] 2025-07-27 22:02:13,852 | INFO     | . stage-in = 0 s
[2025-07-27 18:02:46] 2025-07-27 22:02:13,852 | INFO     | . payload execution = 5603 s
[2025-07-27 18:02:46] 2025-07-27 22:02:13,852 | INFO     | . stage-out = 0 s
[2025-07-27 18:02:46] 2025-07-27 22:02:13,852 | INFO     | . log creation = 0 s
[2025-07-27 18:02:46] 2025-07-27 22:02:13,852 | INFO     | ..............................
[2025-07-27 18:02:46] 2025-07-27 22:02:13,933 | INFO     | 
[2025-07-27 18:02:46] 2025-07-27 22:02:13,934 | INFO     | job summary report
[2025-07-27 18:02:46] 2025-07-27 22:02:13,934 | INFO     | --------------------------------------------------
[2025-07-27 18:02:46] 2025-07-27 22:02:13,934 | INFO     | PanDA job id: 6747579284
[2025-07-27 18:02:46] 2025-07-27 22:02:13,934 | INFO     | task id: 45743349
[2025-07-27 18:02:46] 2025-07-27 22:02:13,934 | INFO     | errors: (none)
[2025-07-27 18:02:46] 2025-07-27 22:02:13,934 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 18:02:46] 2025-07-27 22:02:13,934 | INFO     | pilot state: finished 
[2025-07-27 18:02:46] 2025-07-27 22:02:13,935 | INFO     | transexitcode: 0
[2025-07-27 18:02:46] 2025-07-27 22:02:13,935 | INFO     | exeerrorcode: 0
[2025-07-27 18:02:46] 2025-07-27 22:02:13,935 | INFO     | exeerrordiag: 
[2025-07-27 18:02:46] 2025-07-27 22:02:13,935 | INFO     | exitcode: 0
[2025-07-27 18:02:46] 2025-07-27 22:02:13,935 | INFO     | exitmsg: OK
[2025-07-27 18:02:46] 2025-07-27 22:02:13,935 | INFO     | cpuconsumptiontime: 50633 s
[2025-07-27 18:02:46] 2025-07-27 22:02:13,935 | INFO     | nevents: 400
[2025-07-27 18:02:46] 2025-07-27 22:02:13,935 | INFO     | neventsw: 0
[2025-07-27 18:02:46] 2025-07-27 22:02:13,935 | INFO     | pid: 3029050
[2025-07-27 18:02:46] 2025-07-27 22:02:13,935 | INFO     | pgrp: 3029050
[2025-07-27 18:02:46] 2025-07-27 22:02:13,935 | INFO     | corecount: 10
[2025-07-27 18:02:46] 2025-07-27 22:02:13,935 | INFO     | event service: False
[2025-07-27 18:02:46] 2025-07-27 22:02:13,935 | INFO     | sizes: {0: 2397361, 1: 2397503, 5: 2397765, 11: 2397821, 5614: 2424524, 5615: 2433522, 5618: 2433706, 5622: 2433900}
[2025-07-27 18:02:46] 2025-07-27 22:02:13,935 | INFO     | --------------------------------------------------
[2025-07-27 18:02:46] 2025-07-27 22:02:13,935 | INFO     | 
[2025-07-27 18:02:46] 2025-07-27 22:02:13,935 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 18:02:46] 2025-07-27 22:02:13,954 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,954 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,954 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,955 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,955 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,955 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,955 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,955 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,955 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,955 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,955 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,956 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,956 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,956 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,956 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,956 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,956 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,956 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 18:02:46] 2025-07-27 22:02:13,957 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,957 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 18:02:46] 2025-07-27 22:02:13,957 | INFO     | job 6747579284 has completed (purged errors)
[2025-07-27 18:02:46] 2025-07-27 22:02:13,957 | INFO     | overall cleanup function is called
[2025-07-27 18:02:46] 2025-07-27 22:02:14,965 | INFO     | --- collectZombieJob: --- 10, [3029050]
[2025-07-27 18:02:46] 2025-07-27 22:02:14,966 | INFO     | zombie collector waiting for pid 3029050
[2025-07-27 18:02:46] 2025-07-27 22:02:14,966 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 18:02:46] 2025-07-27 22:02:14,966 | INFO     | collected zombie processes
[2025-07-27 18:02:46] 2025-07-27 22:02:14,966 | INFO     | will attempt to kill all subprocesses of pid=3029050
[2025-07-27 18:02:46] 2025-07-27 22:02:15,173 | INFO     | process IDs to be killed: [3029050] (in reverse order)
[2025-07-27 18:02:46] 2025-07-27 22:02:15,246 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 18:02:46] 2025-07-27 22:02:15,247 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 18:02:46] 2025-07-27 22:02:15,255 | INFO     | did not find any defunct processes belonging to 3029050
[2025-07-27 18:02:46] 2025-07-27 22:02:15,262 | INFO     | did not find any defunct processes belonging to 3029050
[2025-07-27 18:02:46] 2025-07-27 22:02:15,263 | INFO     | ready for new job
[2025-07-27 18:02:46] 2025-07-27 22:02:15,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 18:02:46] 2025-07-27 22:02:15,265 | INFO     | ***************************************
[2025-07-27 18:02:46] 2025-07-27 22:02:15,265 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 18:02:46] 2025-07-27 22:02:15,265 | INFO     | ***************************************
[2025-07-27 18:02:46] 2025-07-27 22:02:15,265 | INFO     | 
[2025-07-27 18:02:46] 2025-07-27 22:02:15,267 | INFO     | architecture information:
[2025-07-27 18:02:46] 2025-07-27 22:02:15,267 | INFO     | executing command: cat /etc/os-release
[2025-07-27 18:02:46] 2025-07-27 22:02:15,282 | INFO     | cat /etc/os-release:
[2025-07-27 18:02:46] NAME="CentOS Linux"
[2025-07-27 18:02:46] VERSION="7 (Core)"
[2025-07-27 18:02:46] ID="centos"
[2025-07-27 18:02:46] ID_LIKE="rhel fedora"
[2025-07-27 18:02:46] VERSION_ID="7"
[2025-07-27 18:02:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 18:02:46] ANSI_COLOR="0;31"
[2025-07-27 18:02:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 18:02:46] HOME_URL="https://www.centos.org/"
[2025-07-27 18:02:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 18:02:46] 
[2025-07-27 18:02:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 18:02:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 18:02:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 18:02:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 18:02:46] 
[2025-07-27 18:02:46] 2025-07-27 22:02:15,282 | INFO     | ***************************************
[2025-07-27 18:02:46] 2025-07-27 22:02:15,785 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 18:02:46] 2025-07-27 22:02:15,802 | INFO     | sufficient remaining disk space (54005858304 B)
[2025-07-27 18:02:46] 2025-07-27 22:02:15,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 18:02:46] 2025-07-27 22:02:15,802 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 18:02:46] 2025-07-27 22:02:15,803 | INFO     | update_server=False
[2025-07-27 18:02:46] 2025-07-27 22:02:15,803 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 18:02:46] 2025-07-27 22:02:15,803 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:02:46] 2025-07-27 22:02:15,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 18:02:46] 2025-07-27 22:02:15,941 | INFO     | all payload control threads have been joined
[2025-07-27 18:02:46] 2025-07-27 22:02:16,169 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 18:02:46] 2025-07-27 22:02:16,233 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 18:02:46] 2025-07-27 22:02:16,234 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 18:02:46] 2025-07-27 22:02:16,234 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:02:46] 2025-07-27 22:02:16,234 | INFO     | will abort loop
[2025-07-27 18:02:46] 2025-07-27 22:02:16,715 | INFO     | all data control threads have been joined
[2025-07-27 18:02:46] 2025-07-27 22:02:16,808 | INFO     | [job] retrieve thread has finished
[2025-07-27 18:02:46] 2025-07-27 22:02:16,808 | INFO     | [job] queue monitor thread has finished
[2025-07-27 18:02:46] 2025-07-27 22:02:16,863 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 18:02:46] 2025-07-27 22:02:16,947 | INFO     | [payload] control thread has finished
[2025-07-27 18:02:46] 2025-07-27 22:02:17,016 | INFO     | all job control threads have been joined
[2025-07-27 18:02:46] 2025-07-27 22:02:17,205 | INFO     | [payload] failed_post thread has finished
[2025-07-27 18:02:46] 2025-07-27 22:02:17,240 | INFO     | [job] job monitor thread has finished
[2025-07-27 18:02:46] 2025-07-27 22:02:17,622 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 18:02:46] 2025-07-27 22:02:17,721 | INFO     | [data] control thread has finished
[2025-07-27 18:02:46] 2025-07-27 22:02:17,809 | INFO     | [data] copytool_out thread has finished
[2025-07-27 18:02:46] 2025-07-27 22:02:17,998 | INFO     | [job] validate thread has finished
[2025-07-27 18:02:46] 2025-07-27 22:02:18,022 | INFO     | [job] control thread has finished
[2025-07-27 18:02:46] 2025-07-27 22:02:18,122 | INFO     | [data] copytool_in thread has finished
[2025-07-27 18:02:46] 2025-07-27 22:02:18,161 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 18:02:46] 2025-07-27 22:02:18,404 | INFO     | [payload] validate_post thread has finished
[2025-07-27 18:02:46] 2025-07-27 22:02:20,175 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 18:02:46] 2025-07-27 22:02:26,773 | INFO     | job.realtimelogging is not enabled
[2025-07-27 18:02:46] 2025-07-27 22:02:27,779 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 18:02:46] 2025-07-27 22:02:29,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140270444844864)>', '<ExcThread(monitor, started 140269731178240)>']
[2025-07-27 18:02:46] 2025-07-27 22:02:34,701 | INFO     | all workflow threads have been joined
[2025-07-27 18:02:46] 2025-07-27 22:02:34,702 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 18:02:46] 2025-07-27 22:02:34,702 | INFO     | traces error code: 0
[2025-07-27 18:02:46] 2025-07-27 22:02:34,702 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 18:02:46] 2025-07-27 22:02:46,678 | INFO     | PID=3021425 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 18:02:46] 2025-07-27 22:02:46,678 | INFO     | .. there are 6 such processes running
[2025-07-27 18:02:46] 2025-07-27 22:02:46,679 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 18:02:46] 2025-07-27 22:02:46,679 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 18:02:46] 2025-07-27 22:02:46,679 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 18:02:46] 2025-07-27 22:02:46,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 18:02:46] 2025-07-27 22:02:46,679 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 18:02:46] 2025-07-27 22:02:46,679 | INFO     | [monitor] control thread has ended
[2025-07-27 18:02:46] 2025-07-27 22:02:46,792 [wrapper] ==== pilot stdout END ====
[2025-07-27 18:02:46] 2025-07-27 22:02:46,795 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 18:02:46] 2025-07-27 22:02:46,798 [wrapper] pilotpid: 3021425
[2025-07-27 18:02:46] 2025-07-27 22:02:46,800 [wrapper] Pilot exit status: 0
[2025-07-27 18:02:46] 2025-07-27 22:02:46,811 [wrapper] pandaids: 6747579284
[2025-07-27 18:02:46] 2025-07-27 22:02:46,858 [wrapper] cleanup supervisor_pilot 3158524 3021426
[2025-07-27 18:02:46] 2025-07-27 22:02:46,861 [wrapper] Test setup, not cleaning
[2025-07-27 18:02:46] 2025-07-27 22:02:46,863 [wrapper] apfmon messages muted
[2025-07-27 18:02:46] 2025-07-27 22:02:46,867 [wrapper] ==== wrapper stdout END ====
[2025-07-27 18:02:46] 2025-07-27 22:02:46,870 [wrapper] ==== wrapper stderr END ====
[2025-07-27 18:02:46]  *** Error codes and diagnostics ***
[2025-07-27 18:02:46]     "exeErrorCode": 0,
[2025-07-27 18:02:46]     "exeErrorDiag": "",
[2025-07-27 18:02:46]     "pilotErrorCode": 0,
[2025-07-27 18:02:46]     "pilotErrorDiag": "",
[2025-07-27 18:02:46]  *** Listing of results directory ***
[2025-07-27 18:02:46] total 345276
[2025-07-27 18:02:46] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 14:08 pilot3.tar.gz
[2025-07-27 18:02:46] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 14:10 queuedata.json
[2025-07-27 18:02:46] -rwx------. 1 boincer umatlas     36292 Jul 27 14:10 runpilot2-wrapper.sh
[2025-07-27 18:02:46] -rw-r--r--. 1 boincer umatlas       100 Jul 27 16:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 18:02:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 16:28 run_atlas
[2025-07-27 18:02:46] -rw-r--r--. 1 boincer umatlas       105 Jul 27 16:28 job.xml
[2025-07-27 18:02:46] -rw-r--r--. 2 boincer umatlas 144225872 Jul 27 16:28 EVNT.45743347._002927.pool.root.1
[2025-07-27 18:02:46] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 16:28 start_atlas.sh
[2025-07-27 18:02:46] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 16:28 shared
[2025-07-27 18:02:46] -rw-r--r--. 2 boincer umatlas    542901 Jul 27 16:28 input.tar.gz
[2025-07-27 18:02:46] -rw-r--r--. 1 boincer umatlas         0 Jul 27 16:28 boinc_lockfile
[2025-07-27 18:02:46] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 16:28 pandaJob.out
[2025-07-27 18:02:46] -rw-------. 1 boincer umatlas    980109 Jul 27 16:28 agis_schedconf.cvmfs.json
[2025-07-27 18:02:46] -rw-------. 1 boincer umatlas   1593052 Jul 27 16:28 agis_ddmendpoints.agis.ALL.json
[2025-07-27 18:02:46] drwx------. 4 boincer umatlas      4096 Jul 27 16:28 pilot3
[2025-07-27 18:02:46] -rw-------. 1 boincer umatlas 203682356 Jul 27 18:01 HITS.45743349._053470.pool.root.1
[2025-07-27 18:02:46] -rw-r--r--. 1 boincer umatlas      6656 Jul 27 18:01 init_data.xml
[2025-07-27 18:02:46] -rw-r--r--. 1 boincer umatlas       529 Jul 27 18:01 boinc_task_state.xml
[2025-07-27 18:02:46] -rw-------. 1 boincer umatlas        95 Jul 27 18:01 pilot_heartbeat.json
[2025-07-27 18:02:46] -rw-------. 1 boincer umatlas      1052 Jul 27 18:02 memory_monitor_summary.json
[2025-07-27 18:02:46] -rw-------. 1 boincer umatlas    334563 Jul 27 18:02 log.45743349._053470.job.log.tgz.1
[2025-07-27 18:02:46] -rw-------. 1 boincer umatlas      7820 Jul 27 18:02 heartbeat.json
[2025-07-27 18:02:46] -rw-r--r--. 1 boincer umatlas        27 Jul 27 18:02 wrapper_checkpoint.txt
[2025-07-27 18:02:46] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 18:02 boinc_mmap_file
[2025-07-27 18:02:46] -rw-------. 1 boincer umatlas       892 Jul 27 18:02 pilotlog.txt
[2025-07-27 18:02:46] -rw-------. 1 boincer umatlas    552609 Jul 27 18:02 log.45743349._053470.job.log.1
[2025-07-27 18:02:46] -rw-------. 1 boincer umatlas       357 Jul 27 18:02 output.list
[2025-07-27 18:02:46] -rw-r--r--. 1 boincer umatlas       620 Jul 27 18:02 runtime_log
[2025-07-27 18:02:46] -rw-------. 1 boincer umatlas    911360 Jul 27 18:02 result.tar.gz
[2025-07-27 18:02:46] -rw-------. 1 boincer umatlas       652 Jul 27 18:02 W09MDmV0K07n9Rq4apOajLDm4fhM0noT9bVof3QYDmVu2KDmrTYpHm.diag
[2025-07-27 18:02:46] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 18:02 runtime_log.err
[2025-07-27 18:02:46] -rw-r--r--. 1 boincer umatlas     21868 Jul 27 18:02 stderr.txt
[2025-07-27 18:02:46] HITS file was successfully produced:
[2025-07-27 18:02:46] -rw-------. 1 boincer umatlas 203682356 Jul 27 18:01 shared/HITS.pool.root.1
[2025-07-27 18:02:46]  *** Contents of shared directory: ***
[2025-07-27 18:02:46] total 341204
[2025-07-27 18:02:46] -rw-r--r--. 2 boincer umatlas 144225872 Jul 27 16:28 ATLAS.root_0
[2025-07-27 18:02:46] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 16:28 start_atlas.sh
[2025-07-27 18:02:46] -rw-r--r--. 2 boincer umatlas    542901 Jul 27 16:28 input.tar.gz
[2025-07-27 18:02:46] -rw-------. 1 boincer umatlas 203682356 Jul 27 18:01 HITS.pool.root.1
[2025-07-27 18:02:46] -rw-------. 1 boincer umatlas    911360 Jul 27 18:02 result.tar.gz
18:02:48 (3017837): run_atlas exited; CPU time 50717.997978
18:02:48 (3017837): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN