Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:28:20 (1000557): wrapper (7.7.26015): starting
13:28:20 (1000557): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 13:28:20] Arguments: --nthreads 12
[2025-07-27 13:28:20] Threads: 12
[2025-07-27 13:28:20] Checking for CVMFS
[2025-07-27 13:28:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 13:28:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 13:28:20] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 13:28:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 13:28:21] 2.11.5.0 196232 37482 246956 148823 3 195 33507910 45568001 9772 130560 0 310643845 99.780 198565026 26942 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-27 13:28:21] CVMFS is ok
[2025-07-27 13:28:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 13:28:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 13:28:21] Further information can be found at the LHC@home message board.
[2025-07-27 13:28:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 13:28:21] Checking for apptainer binary...
[2025-07-27 13:28:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 13:28:21] Running /usr/bin/apptainer --version
[2025-07-27 13:28:21] apptainer version 1.4.1-1.el9
[2025-07-27 13:28:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 13:28:21] wns0092.triumf.lcg
[2025-07-27 13:28:21] apptainer works
[2025-07-27 13:28:21] Set ATHENA_PROC_NUMBER=12
[2025-07-27 13:28:21] Set ATHENA_CORE_NUMBER=12
[2025-07-27 13:28:21] Starting ATLAS job with PandaID=6747578690
[2025-07-27 13:28:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:31:39]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:31:39] 2025-07-27 20:31:06,737 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:31:39] 2025-07-27 20:31:06,737 | WARNING  | found no stored workdir sizes
[2025-07-27 13:31:39] 2025-07-27 20:31:06,737 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 13:31:39] 2025-07-27 20:31:06,737 | WARNING  | wrong length of table data, x=[1753648132.0], y=[1045.0] (must be same and length>=4)
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | could have reported an average CPU frequency of 2435 MHz (4 samples)
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | ..............................
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . Timing measurements:
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . get job = 0 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . initial setup = 2 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . payload setup = 3 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . stage-in = 0 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . payload execution = 16 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . stage-out = 0 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . log creation = 0 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | ..............................
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6747578690/pilotlog.txt
[2025-07-27 13:31:39] 2025-07-27 20:31:06,748 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-27 13:31:39] - Log from pilotlog.txt -
[2025-07-27 13:31:39] 2025-07-27 20:31:06,736 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 13:31:39] 2025-07-27 20:31:06,736 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 13:31:39] 2025-07-27 20:31:06,737 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 13:31:39] 2025-07-27 20:31:06,737 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:31:39] 2025-07-27 20:31:06,737 | WARNING  | found no stored workdir sizes
[2025-07-27 13:31:39] 2025-07-27 20:31:06,737 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 13:31:39] 2025-07-27 20:31:06,737 | WARNING  | wrong length of table data, x=[1753648132.0], y=[1045.0] (must be same and length>=4)
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | could have reported an average CPU frequency of 2435 MHz (4 samples)
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | ..............................
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . Timing measurements:
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . get job = 0 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . initial setup = 2 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . payload setup = 3 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . stage-in = 0 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . payload execution = 16 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . stage-out = 0 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . log creation = 0 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | ..............................
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6747578690/pilotlog.txt
[2025-07-27 13:31:39] 2025-07-27 20:31:06,748 | WARNING  | 
[2025-07-27 13:31:39] [begin log extracts]
[2025-07-27 13:31:39] - Log from pilotlog.txt -
[2025-07-27 13:31:39] 2025-07-27 20:31:06,736 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 13:31:39] 2025-07-27 20:31:06,736 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 13:31:39] 2025-07-27 20:31:06,737 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 13:31:39] 2025-07-27 20:31:06,737 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:31:39] 2025-07-27 20:31:06,737 | WARNING  | found no stored workdir sizes
[2025-07-27 13:31:39] 2025-07-27 20:31:06,737 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 13:31:39] 2025-07-27 20:31:06,737 | WARNING  | wrong length of table data, x=[1753648132.0], y=[1045.0] (must be same and length>=4)
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | could have reported an average CPU frequency of 2435 MHz (4 samples)
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | ..............................
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . Timing measurements:
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . get job = 0 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . initial setup = 2 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . payload setup = 3 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . stage-in = 0 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . payload execution = 16 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . stage-out = 0 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | . log creation = 0 s
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | ..............................
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 13:31:39] 2025-07-27 20:31:06,738 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6747578690/pilotlog.txt
[2025-07-27 13:31:39] [end log extracts]
[2025-07-27 13:31:39] 2025-07-27 20:31:06,748 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-27 13:31:39] 2025-07-27 20:31:06,749 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-27 13:31:39] 2025-07-27 20:31:07,301 | INFO     | 
[2025-07-27 13:31:39] 2025-07-27 20:31:07,301 | INFO     | job summary report
[2025-07-27 13:31:39] 2025-07-27 20:31:07,301 | INFO     | --------------------------------------------------
[2025-07-27 13:31:39] 2025-07-27 20:31:07,301 | INFO     | PanDA job id: 6747578690
[2025-07-27 13:31:39] 2025-07-27 20:31:07,301 | INFO     | task id: 45743349
[2025-07-27 13:31:39] 2025-07-27 20:31:07,301 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-27 13:28:59,232 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-27 13:31:39] 2025-07-27 20:31:07,301 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:31:39] 2025-07-27 20:31:07,301 | INFO     | pilot state: failed 
[2025-07-27 13:31:39] 2025-07-27 20:31:07,301 | INFO     | transexitcode: 65
[2025-07-27 13:31:39] 2025-07-27 20:31:07,301 | INFO     | exeerrorcode: 65
[2025-07-27 13:31:39] 2025-07-27 20:31:07,301 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 13:31:39] 2025-07-27 20:31:07,301 | INFO     | exitcode: 65
[2025-07-27 13:31:39] 2025-07-27 20:31:07,301 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 13:31:39] 2025-07-27 20:31:07,302 | INFO     | cpuconsumptiontime: 16 s
[2025-07-27 13:31:39] 2025-07-27 20:31:07,302 | INFO     | nevents: 0
[2025-07-27 13:31:39] 2025-07-27 20:31:07,302 | INFO     | neventsw: 0
[2025-07-27 13:31:39] 2025-07-27 20:31:07,302 | INFO     | pid: 1010432
[2025-07-27 13:31:39] 2025-07-27 20:31:07,302 | INFO     | pgrp: 1010432
[2025-07-27 13:31:39] 2025-07-27 20:31:07,302 | INFO     | corecount: 12
[2025-07-27 13:31:39] 2025-07-27 20:31:07,302 | INFO     | event service: False
[2025-07-27 13:31:39] 2025-07-27 20:31:07,302 | INFO     | sizes: {0: 2397194, 1: 2397449, 4: 2397711, 11: 2397739, 23: 2420950, 24: 2425398, 143: 2425536}
[2025-07-27 13:31:39] 2025-07-27 20:31:07,302 | INFO     | --------------------------------------------------
[2025-07-27 13:31:39] 2025-07-27 20:31:07,302 | INFO     | 
[2025-07-27 13:31:39] 2025-07-27 20:31:07,302 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-27 13:31:39] 2025-07-27 20:31:07,317 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,318 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,318 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,318 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,318 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,318 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,318 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,318 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,318 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,318 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,318 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,318 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,318 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,318 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,318 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,318 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:31:39] 2025-07-27 20:31:07,319 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,319 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 20:31:07,319 | INFO     | job 6747578690 has completed (purged errors)
[2025-07-27 13:31:39] 2025-07-27 20:31:07,319 | INFO     | overall cleanup function is called
[2025-07-27 13:31:39] 2025-07-27 20:31:08,327 | INFO     | --- collectZombieJob: --- 10, [1010432]
[2025-07-27 13:31:39] 2025-07-27 20:31:08,327 | INFO     | zombie collector waiting for pid 1010432
[2025-07-27 13:31:39] 2025-07-27 20:31:08,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:31:39] 2025-07-27 20:31:08,328 | INFO     | collected zombie processes
[2025-07-27 13:31:39] 2025-07-27 20:31:08,328 | INFO     | will attempt to kill all subprocesses of pid=1010432
[2025-07-27 13:31:39] 2025-07-27 20:31:08,452 | INFO     | process IDs to be killed: [1010432] (in reverse order)
[2025-07-27 13:31:39] 2025-07-27 20:31:08,502 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:31:39] 2025-07-27 20:31:08,503 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:31:39] 2025-07-27 20:31:08,508 | INFO     | did not find any defunct processes belonging to 1010432
[2025-07-27 13:31:39] 2025-07-27 20:31:08,513 | INFO     | did not find any defunct processes belonging to 1010432
[2025-07-27 13:31:39] 2025-07-27 20:31:08,513 | INFO     | ready for new job
[2025-07-27 13:31:39] 2025-07-27 20:31:08,513 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:31:39] 2025-07-27 20:31:08,514 | INFO     | ***************************************
[2025-07-27 13:31:39] 2025-07-27 20:31:08,514 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:31:39] 2025-07-27 20:31:08,515 | INFO     | ***************************************
[2025-07-27 13:31:39] 2025-07-27 20:31:08,515 | INFO     | 
[2025-07-27 13:31:39] 2025-07-27 20:31:08,516 | INFO     | architecture information:
[2025-07-27 13:31:39] 2025-07-27 20:31:08,517 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:31:39] 2025-07-27 20:31:08,527 | INFO     | cat /etc/os-release:
[2025-07-27 13:31:39] NAME="CentOS Linux"
[2025-07-27 13:31:39] VERSION="7 (Core)"
[2025-07-27 13:31:39] ID="centos"
[2025-07-27 13:31:39] ID_LIKE="rhel fedora"
[2025-07-27 13:31:39] VERSION_ID="7"
[2025-07-27 13:31:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:31:39] ANSI_COLOR="0;31"
[2025-07-27 13:31:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:31:39] HOME_URL="https://www.centos.org/"
[2025-07-27 13:31:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:31:39] 
[2025-07-27 13:31:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:31:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:31:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:31:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:31:39] 
[2025-07-27 13:31:39] 2025-07-27 20:31:08,527 | INFO     | ***************************************
[2025-07-27 13:31:39] 2025-07-27 20:31:09,030 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-27 13:31:39] 2025-07-27 20:31:09,042 | INFO     | sufficient remaining disk space (2087702233088 B)
[2025-07-27 13:31:39] 2025-07-27 20:31:09,042 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:31:39] 2025-07-27 20:31:09,042 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:31:39] 2025-07-27 20:31:09,042 | INFO     | update_server=False
[2025-07-27 13:31:39] 2025-07-27 20:31:09,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:31:39] 2025-07-27 20:31:09,043 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:31:39] 2025-07-27 20:31:09,126 | INFO     | all data control threads have been joined
[2025-07-27 13:31:39] 2025-07-27 20:31:09,443 | INFO     | all job control threads have been joined
[2025-07-27 13:31:39] 2025-07-27 20:31:09,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:31:39] 2025-07-27 20:31:09,854 | INFO     | aborting loop
[2025-07-27 13:31:39] 2025-07-27 20:31:10,047 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:31:39] 2025-07-27 20:31:10,131 | INFO     | [data] control thread has finished
[2025-07-27 13:31:39] 2025-07-27 20:31:10,132 | INFO     | all payload control threads have been joined
[2025-07-27 13:31:39] 2025-07-27 20:31:10,133 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:31:39] 2025-07-27 20:31:10,178 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:31:39] 2025-07-27 20:31:10,455 | INFO     | [job] control thread has finished
[2025-07-27 13:31:39] 2025-07-27 20:31:10,692 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:31:39] 2025-07-27 20:31:10,860 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:31:39] 2025-07-27 20:31:10,967 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:31:39] 2025-07-27 20:31:11,048 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:31:39] 2025-07-27 20:31:11,137 | INFO     | [payload] control thread has finished
[2025-07-27 13:31:39] 2025-07-27 20:31:11,257 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:31:39] 2025-07-27 20:31:11,349 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:31:39] 2025-07-27 20:31:11,353 | INFO     | [job] validate thread has finished
[2025-07-27 13:31:39] 2025-07-27 20:31:11,492 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:31:39] 2025-07-27 20:31:11,533 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:31:39] 2025-07-27 20:31:11,817 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:31:39] 2025-07-27 20:31:12,823 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:31:39] 2025-07-27 20:31:15,354 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:31:39] 2025-07-27 20:31:15,881 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140154207041344)>', '<ExcThread(monitor, started 140153666381568)>']
[2025-07-27 13:31:39] 2025-07-27 20:31:20,906 | INFO     | all workflow threads have been joined
[2025-07-27 13:31:39] 2025-07-27 20:31:20,906 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:31:39] 2025-07-27 20:31:20,906 | INFO     | traces error code: 0
[2025-07-27 13:31:39] 2025-07-27 20:31:20,906 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:31:39] 2025-07-27 20:31:39,612 | INFO     | PID=1004130 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 13:31:39] 2025-07-27 20:31:39,613 | INFO     | .. there are 8 such processes running
[2025-07-27 13:31:39] 2025-07-27 20:31:39,613 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:31:39] 2025-07-27 20:31:39,613 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:31:39] 2025-07-27 20:31:39,613 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:31:39] 2025-07-27 20:31:39,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:31:39] 2025-07-27 20:31:39,613 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 13:31:39] 2025-07-27 20:31:39,613 | INFO     | [monitor] control thread has ended
[2025-07-27 13:31:39] 2025-07-27 20:31:39,734 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:31:39] 2025-07-27 20:31:39,736 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:31:39] 2025-07-27 20:31:39,738 [wrapper] pilotpid: 1004130
[2025-07-27 13:31:39] 2025-07-27 20:31:39,739 [wrapper] Pilot exit status: 0
[2025-07-27 13:31:39] 2025-07-27 20:31:39,746 [wrapper] pandaids: 6747578690
[2025-07-27 13:31:39] 2025-07-27 20:31:39,777 [wrapper] cleanup supervisor_pilot 1004136 1004131
[2025-07-27 13:31:39] 2025-07-27 20:31:39,780 [wrapper] Test setup, not cleaning
[2025-07-27 13:31:39] 2025-07-27 20:31:39,782 [wrapper] apfmon messages muted
[2025-07-27 13:31:39] 2025-07-27 20:31:39,784 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:31:39] 2025-07-27 20:31:39,786 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:31:39]  *** Error codes and diagnostics ***
[2025-07-27 13:31:39]     "exeErrorCode": 65,
[2025-07-27 13:31:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 13:31:39]     "pilotErrorCode": 1305,
[2025-07-27 13:31:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 13:31:39]  *** Listing of results directory ***
[2025-07-27 13:31:39] total 144252
[2025-07-27 13:31:39] -rw-r--r--. 1 boinc boinc    530466 Jul 27 10:39 pilot3.tar.gz
[2025-07-27 13:31:39] -rw-r--r--. 1 boinc boinc      5112 Jul 27 11:02 queuedata.json
[2025-07-27 13:31:39] -rwx------. 1 boinc boinc     36292 Jul 27 11:02 runpilot2-wrapper.sh
[2025-07-27 13:31:39] -rw-r--r--. 1 boinc boinc       100 Jul 27 13:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:31:39] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 13:28 run_atlas
[2025-07-27 13:31:39] -rw-r--r--. 1 boinc boinc       105 Jul 27 13:28 job.xml
[2025-07-27 13:31:39] -rw-r--r--. 2 boinc boinc 143653199 Jul 27 13:28 EVNT.45743347._002919.pool.root.1
[2025-07-27 13:31:39] -rw-r--r--. 2 boinc boinc     15095 Jul 27 13:28 start_atlas.sh
[2025-07-27 13:31:39] drwxrwx--x. 2 boinc boinc      4096 Jul 27 13:28 shared
[2025-07-27 13:31:39] -rw-r--r--. 2 boinc boinc    542894 Jul 27 13:28 input.tar.gz
[2025-07-27 13:31:39] -rw-r--r--. 1 boinc boinc      6596 Jul 27 13:28 init_data.xml
[2025-07-27 13:31:39] -rw-r--r--. 1 boinc boinc         0 Jul 27 13:28 boinc_lockfile
[2025-07-27 13:31:39] -rw-r--r--. 1 boinc boinc      2562 Jul 27 13:28 pandaJob.out
[2025-07-27 13:31:39] -rw-------. 1 boinc boinc    980109 Jul 27 13:28 agis_schedconf.cvmfs.json
[2025-07-27 13:31:39] -rw-------. 1 boinc boinc   1593052 Jul 27 13:28 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:31:39] drwx------. 4 boinc boinc      4096 Jul 27 13:28 pilot3
[2025-07-27 13:31:39] -rw-r--r--. 1 boinc boinc       521 Jul 27 13:28 boinc_task_state.xml
[2025-07-27 13:31:39] -rw-------. 1 boinc boinc       959 Jul 27 13:29 memory_monitor_summary.json
[2025-07-27 13:31:39] -rw-------. 1 boinc boinc     20390 Jul 27 13:29 log.45743349._053348.job.log.tgz.1
[2025-07-27 13:31:39] -rw-------. 1 boinc boinc      8378 Jul 27 13:31 heartbeat.json
[2025-07-27 13:31:39] -rw-r--r--. 1 boinc boinc        22 Jul 27 13:31 wrapper_checkpoint.txt
[2025-07-27 13:31:39] -rw-r--r--. 1 boinc boinc      8192 Jul 27 13:31 boinc_mmap_file
[2025-07-27 13:31:39] -rw-------. 1 boinc boinc       892 Jul 27 13:31 pilotlog.txt
[2025-07-27 13:31:39] -rw-------. 1 boinc boinc        95 Jul 27 13:31 pilot_heartbeat.json
[2025-07-27 13:31:39] -rw-------. 1 boinc boinc     74516 Jul 27 13:31 log.45743349._053348.job.log.1
[2025-07-27 13:31:39] -rw-------. 1 boinc boinc       188 Jul 27 13:31 output.list
[2025-07-27 13:31:39] -rw-r--r--. 1 boinc boinc       620 Jul 27 13:31 runtime_log
[2025-07-27 13:31:39] -rw-------. 1 boinc boinc    112640 Jul 27 13:31 result.tar.gz
[2025-07-27 13:31:39] -rw-r--r--. 1 boinc boinc      8485 Jul 27 13:31 runtime_log.err
[2025-07-27 13:31:39] -rw-------. 1 boinc boinc       644 Jul 27 13:31 MuILDmrsK07n9Rq4apOajLDm4fhM0noT9bVof3QYDm6s2KDmiGxX5m.diag
[2025-07-27 13:31:39] -rw-r--r--. 1 boinc boinc     21631 Jul 27 13:31 stderr.txt
[2025-07-27 13:31:39] No HITS result produced
[2025-07-27 13:31:39]  *** Contents of shared directory: ***
[2025-07-27 13:31:39] total 140948
[2025-07-27 13:31:39] -rw-r--r--. 2 boinc boinc 143653199 Jul 27 13:28 ATLAS.root_0
[2025-07-27 13:31:39] -rw-r--r--. 2 boinc boinc     15095 Jul 27 13:28 start_atlas.sh
[2025-07-27 13:31:39] -rw-r--r--. 2 boinc boinc    542894 Jul 27 13:28 input.tar.gz
[2025-07-27 13:31:39] -rw-------. 1 boinc boinc    112640 Jul 27 13:31 result.tar.gz
13:31:41 (1000557): run_atlas exited; CPU time 19.260459
13:31:41 (1000557): called boinc_finish(0)

</stderr_txt>
]]>

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