Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:15:57 (32263): wrapper (7.7.26015): starting
16:15:57 (32263): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 16:15:57] Arguments: --nthreads 12
[2025-07-27 16:15:57] Threads: 12
[2025-07-27 16:15:57] Checking for CVMFS
[2025-07-27 16:15:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 16:15:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 16:15:57] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 16:15:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 16:15:57] 2.11.2.0 2979 112470 104144 148823 1 56 15871162 20275200 1 130560 0 38516070 99.971 9532510 10584 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 16:15:57] CVMFS is ok
[2025-07-27 16:15:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 16:15:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 16:15:57] Further information can be found at the LHC@home message board.
[2025-07-27 16:15:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 16:15:57] Checking for apptainer binary...
[2025-07-27 16:15:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 16:15:57] Running /usr/bin/apptainer --version
[2025-07-27 16:15:57] apptainer version 1.3.2-1.el7
[2025-07-27 16:15:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 16:15:59] c-205-7.aglt2.org
[2025-07-27 16:15:59] apptainer works
[2025-07-27 16:15:59] Set ATHENA_PROC_NUMBER=12
[2025-07-27 16:15:59] Set ATHENA_CORE_NUMBER=12
[2025-07-27 16:15:59] Starting ATLAS job with PandaID=6747411010
[2025-07-27 16:15:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 17:38:16]  *** The last 200 lines of the pilot log: ***
[2025-07-27 17:38:16]  is_altstaged=None
[2025-07-27 17:38:16]  is_tar=False
[2025-07-27 17:38:16]  lfn=log.45743349._048289.job.log.tgz.1
[2025-07-27 17:38:16]  mtime=0
[2025-07-27 17:38:16]  protocol_id=None
[2025-07-27 17:38:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 17:38:16]  replicas=None
[2025-07-27 17:38:16]  scope=mc23_13p6TeV
[2025-07-27 17:38:16]  status=None
[2025-07-27 17:38:16]  status_code=0
[2025-07-27 17:38:16]  storage_token=
[2025-07-27 17:38:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747411010/log.45743349._048289.job.log.tgz.1
[2025-07-27 17:38:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/05/log.45743349._048289.job.log.tgz.1
[2025-07-27 17:38:16]  workdir=None
[2025-07-27 17:38:16] ]
[2025-07-27 17:38:16] 2025-07-27 21:37:36,715 | INFO     | transferring file log.45743349._048289.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747411010/log.45743349._048289.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 17:38:16] 2025-07-27 21:37:36,716 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747411010/log.45743349._048289.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._048289.job
[2025-07-27 17:38:16] 2025-07-27 21:37:36,738 | INFO     | adding to output.list: log.45743349._048289.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/05/log.45743349._048289.job.log.tg
[2025-07-27 17:38:16] 2025-07-27 21:37:36,739 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 17:38:16] 2025-07-27 21:37:36,739 | INFO     | summary of transferred files:
[2025-07-27 17:38:16] 2025-07-27 21:37:36,739 | INFO     |  -- lfn=log.45743349._048289.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 17:38:16] 2025-07-27 21:37:36,740 | INFO     | stage-out finished correctly
[2025-07-27 17:38:16] 2025-07-27 21:37:38,228 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 17:38:16] 2025-07-27 21:37:39,758 | INFO     | job 6747411010 has state=finished
[2025-07-27 17:38:16] 2025-07-27 21:37:39,758 | INFO     | preparing for final server update for job 6747411010 in state='finished'
[2025-07-27 17:38:16] 2025-07-27 21:37:39,759 | INFO     | this job has now completed (state=finished)
[2025-07-27 17:38:16] 2025-07-27 21:37:39,759 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 17:38:16] 2025-07-27 21:37:39,759 | INFO     | log transfer has been attempted: DONE
[2025-07-27 17:38:16] 2025-07-27 21:37:39,759 | INFO     | job 6747411010 has finished - writing final server update
[2025-07-27 17:38:16] 2025-07-27 21:37:39,760 | INFO     | total number of processed events: 400 (read)
[2025-07-27 17:38:16] 2025-07-27 21:37:39,760 | INFO     | executing command: lscpu
[2025-07-27 17:38:16] 2025-07-27 21:37:39,786 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 17:38:16] 2025-07-27 21:37:41,060 | WARNING  | process 10928 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 17:38:16] 2025-07-27 21:37:41,060 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747411010/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:38:16] 2025-07-27 21:37:41,149 | INFO     | number of running child processes to parent process 10928: 1
[2025-07-27 17:38:16] 2025-07-27 21:37:41,149 | INFO     | maximum number of monitored processes: 6
[2025-07-27 17:38:16] 2025-07-27 21:37:43,652 | INFO     | monitor loop #364: job 0:6747411010 is in state 'finished'
[2025-07-27 17:38:16] 2025-07-27 21:37:43,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:38:16] 2025-07-27 21:37:44,770 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 17:38:16] 2025-07-27 21:37:44,774 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-07-27 17:38:16] 2025-07-27 21:37:44,776 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747411010/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:38:16] 2025-07-27 21:37:44,777 | INFO     | extracted standard info from prmon json
[2025-07-27 17:38:16] 2025-07-27 21:37:44,777 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 17:38:16] 2025-07-27 21:37:44,777 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 17:38:16] 2025-07-27 21:37:44,777 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 17:38:16] 2025-07-27 21:37:44,778 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 17:38:16] 2025-07-27 21:37:44,779 | INFO     | fitting pss+swap vs Time
[2025-07-27 17:38:16] 2025-07-27 21:37:44,779 | INFO     | sum of square deviations: 120605052.0
[2025-07-27 17:38:16] 2025-07-27 21:37:44,780 | INFO     | sum of deviations: -7585456750.0
[2025-07-27 17:38:16] 2025-07-27 21:37:44,780 | INFO     | mean x: 1753649904.0
[2025-07-27 17:38:16] 2025-07-27 21:37:44,780 | INFO     | mean y: 2878958.506849315
[2025-07-27 17:38:16] 2025-07-27 21:37:44,780 | INFO     | -- intersect: 110298718816.30693
[2025-07-27 17:38:16] 2025-07-27 21:37:44,780 | INFO     | intersect: 110298718816.30693
[2025-07-27 17:38:16] 2025-07-27 21:37:44,780 | INFO     | chi2: 0.1131649665580279
[2025-07-27 17:38:16] 2025-07-27 21:37:44,781 | INFO     | -- intersect: 110298718816.30693
[2025-07-27 17:38:16] 2025-07-27 21:37:44,781 | INFO     | current memory leak: -62.90 B/s (using 73 data points, chi2=0.11)
[2025-07-27 17:38:16] 2025-07-27 21:37:44,781 | INFO     | could have reported an average CPU frequency of 2058 MHz (6 samples)
[2025-07-27 17:38:16] 2025-07-27 21:37:44,781 | INFO     | ..............................
[2025-07-27 17:38:16] 2025-07-27 21:37:44,781 | INFO     | . Timing measurements:
[2025-07-27 17:38:16] 2025-07-27 21:37:44,781 | INFO     | . get job = 0 s
[2025-07-27 17:38:16] 2025-07-27 21:37:44,781 | INFO     | . initial setup = 2 s
[2025-07-27 17:38:16] 2025-07-27 21:37:44,781 | INFO     | . payload setup = 9 s
[2025-07-27 17:38:16] 2025-07-27 21:37:44,782 | INFO     | . stage-in = 0 s
[2025-07-27 17:38:16] 2025-07-27 21:37:44,782 | INFO     | . payload execution = 4853 s
[2025-07-27 17:38:16] 2025-07-27 21:37:44,782 | INFO     | . stage-out = 0 s
[2025-07-27 17:38:16] 2025-07-27 21:37:44,782 | INFO     | . log creation = 0 s
[2025-07-27 17:38:16] 2025-07-27 21:37:44,782 | INFO     | ..............................
[2025-07-27 17:38:16] 2025-07-27 21:37:44,866 | INFO     | 
[2025-07-27 17:38:16] 2025-07-27 21:37:44,866 | INFO     | job summary report
[2025-07-27 17:38:16] 2025-07-27 21:37:44,867 | INFO     | --------------------------------------------------
[2025-07-27 17:38:16] 2025-07-27 21:37:44,867 | INFO     | PanDA job id: 6747411010
[2025-07-27 17:38:16] 2025-07-27 21:37:44,867 | INFO     | task id: 45743349
[2025-07-27 17:38:16] 2025-07-27 21:37:44,867 | INFO     | errors: (none)
[2025-07-27 17:38:16] 2025-07-27 21:37:44,867 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 17:38:16] 2025-07-27 21:37:44,867 | INFO     | pilot state: finished 
[2025-07-27 17:38:16] 2025-07-27 21:37:44,868 | INFO     | transexitcode: 0
[2025-07-27 17:38:16] 2025-07-27 21:37:44,868 | INFO     | exeerrorcode: 0
[2025-07-27 17:38:16] 2025-07-27 21:37:44,868 | INFO     | exeerrordiag: 
[2025-07-27 17:38:16] 2025-07-27 21:37:44,868 | INFO     | exitcode: 0
[2025-07-27 17:38:16] 2025-07-27 21:37:44,868 | INFO     | exitmsg: OK
[2025-07-27 17:38:16] 2025-07-27 21:37:44,868 | INFO     | cpuconsumptiontime: 53167 s
[2025-07-27 17:38:16] 2025-07-27 21:37:44,868 | INFO     | nevents: 400
[2025-07-27 17:38:16] 2025-07-27 21:37:44,869 | INFO     | neventsw: 0
[2025-07-27 17:38:16] 2025-07-27 21:37:44,869 | INFO     | pid: 10928
[2025-07-27 17:38:16] 2025-07-27 21:37:44,869 | INFO     | pgrp: 10928
[2025-07-27 17:38:16] 2025-07-27 21:37:44,869 | INFO     | corecount: 12
[2025-07-27 17:38:16] 2025-07-27 21:37:44,869 | INFO     | event service: False
[2025-07-27 17:38:16] 2025-07-27 21:37:44,869 | INFO     | sizes: {0: 2397361, 1: 2397503, 5: 2397765, 11: 2397821, 4867: 2424074, 4869: 2433072, 4870: 2433256, 4877: 2433450}
[2025-07-27 17:38:16] 2025-07-27 21:37:44,870 | INFO     | --------------------------------------------------
[2025-07-27 17:38:16] 2025-07-27 21:37:44,870 | INFO     | 
[2025-07-27 17:38:16] 2025-07-27 21:37:44,870 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 17:38:16] 2025-07-27 21:37:44,896 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,897 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,897 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,897 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,897 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,898 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,898 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,898 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,898 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,898 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,898 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,899 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,899 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,899 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,899 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,899 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,899 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,900 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 17:38:16] 2025-07-27 21:37:44,900 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,900 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 17:38:16] 2025-07-27 21:37:44,900 | INFO     | job 6747411010 has completed (purged errors)
[2025-07-27 17:38:16] 2025-07-27 21:37:44,900 | INFO     | overall cleanup function is called
[2025-07-27 17:38:16] 2025-07-27 21:37:45,909 | INFO     | --- collectZombieJob: --- 10, [10928]
[2025-07-27 17:38:16] 2025-07-27 21:37:45,909 | INFO     | zombie collector waiting for pid 10928
[2025-07-27 17:38:16] 2025-07-27 21:37:45,909 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 17:38:16] 2025-07-27 21:37:45,909 | INFO     | collected zombie processes
[2025-07-27 17:38:16] 2025-07-27 21:37:45,909 | INFO     | will attempt to kill all subprocesses of pid=10928
[2025-07-27 17:38:16] 2025-07-27 21:37:46,000 | INFO     | process IDs to be killed: [10928] (in reverse order)
[2025-07-27 17:38:16] 2025-07-27 21:37:46,052 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 17:38:16] 2025-07-27 21:37:46,053 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 17:38:16] 2025-07-27 21:37:46,056 | INFO     | did not find any defunct processes belonging to 10928
[2025-07-27 17:38:16] 2025-07-27 21:37:46,059 | INFO     | did not find any defunct processes belonging to 10928
[2025-07-27 17:38:16] 2025-07-27 21:37:46,059 | INFO     | ready for new job
[2025-07-27 17:38:16] 2025-07-27 21:37:46,059 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 17:38:16] 2025-07-27 21:37:46,060 | INFO     | ***************************************
[2025-07-27 17:38:16] 2025-07-27 21:37:46,060 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 17:38:16] 2025-07-27 21:37:46,060 | INFO     | ***************************************
[2025-07-27 17:38:16] 2025-07-27 21:37:46,060 | INFO     | 
[2025-07-27 17:38:16] 2025-07-27 21:37:46,061 | INFO     | architecture information:
[2025-07-27 17:38:16] 2025-07-27 21:37:46,061 | INFO     | executing command: cat /etc/os-release
[2025-07-27 17:38:16] 2025-07-27 21:37:46,077 | INFO     | cat /etc/os-release:
[2025-07-27 17:38:16] NAME="CentOS Linux"
[2025-07-27 17:38:16] VERSION="7 (Core)"
[2025-07-27 17:38:16] ID="centos"
[2025-07-27 17:38:16] ID_LIKE="rhel fedora"
[2025-07-27 17:38:16] VERSION_ID="7"
[2025-07-27 17:38:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 17:38:16] ANSI_COLOR="0;31"
[2025-07-27 17:38:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 17:38:16] HOME_URL="https://www.centos.org/"
[2025-07-27 17:38:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 17:38:16] 
[2025-07-27 17:38:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 17:38:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 17:38:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 17:38:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 17:38:16] 
[2025-07-27 17:38:16] 2025-07-27 21:37:46,077 | INFO     | ***************************************
[2025-07-27 17:38:16] 2025-07-27 21:37:46,580 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 17:38:16] 2025-07-27 21:37:46,595 | INFO     | sufficient remaining disk space (29507977216 B)
[2025-07-27 17:38:16] 2025-07-27 21:37:46,595 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 17:38:16] 2025-07-27 21:37:46,596 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 17:38:16] 2025-07-27 21:37:46,596 | INFO     | update_server=False
[2025-07-27 17:38:16] 2025-07-27 21:37:46,596 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 17:38:16] 2025-07-27 21:37:46,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:38:16] 2025-07-27 21:37:47,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:38:16] 2025-07-27 21:37:47,161 | INFO     | aborting loop
[2025-07-27 17:38:16] 2025-07-27 21:37:47,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 17:38:16] 2025-07-27 21:37:47,520 | INFO     | all job control threads have been joined
[2025-07-27 17:38:16] 2025-07-27 21:37:47,601 | INFO     | [job] retrieve thread has finished
[2025-07-27 17:38:16] 2025-07-27 21:37:47,602 | INFO     | [job] queue monitor thread has finished
[2025-07-27 17:38:16] 2025-07-27 21:37:47,668 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 17:38:16] 2025-07-27 21:37:47,677 | INFO     | all data control threads have been joined
[2025-07-27 17:38:16] 2025-07-27 21:37:47,776 | INFO     | [job] validate thread has finished
[2025-07-27 17:38:16] 2025-07-27 21:37:47,924 | INFO     | all payload control threads have been joined
[2025-07-27 17:38:16] 2025-07-27 21:37:47,949 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 17:38:16] 2025-07-27 21:37:48,166 | INFO     | [job] job monitor thread has finished
[2025-07-27 17:38:16] 2025-07-27 21:37:48,216 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 17:38:16] 2025-07-27 21:37:48,359 | INFO     | [data] copytool_in thread has finished
[2025-07-27 17:38:16] 2025-07-27 21:37:48,360 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 17:38:16] 2025-07-27 21:37:48,509 | INFO     | [payload] failed_post thread has finished
[2025-07-27 17:38:16] 2025-07-27 21:37:48,525 | INFO     | [job] control thread has finished
[2025-07-27 17:38:16] 2025-07-27 21:37:48,682 | INFO     | [data] control thread has finished
[2025-07-27 17:38:16] 2025-07-27 21:37:48,818 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 17:38:16] 2025-07-27 21:37:48,929 | INFO     | [payload] control thread has finished
[2025-07-27 17:38:16] 2025-07-27 21:37:49,187 | INFO     | [payload] validate_post thread has finished
[2025-07-27 17:38:16] 2025-07-27 21:37:49,346 | INFO     | [data] copytool_out thread has finished
[2025-07-27 17:38:16] 2025-07-27 21:37:52,824 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 17:38:16] 2025-07-27 21:37:53,557 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140648190289728)>', '<ExcThread(monitor, started 140647604406016)>']
[2025-07-27 17:38:16] 2025-07-27 21:37:58,581 | INFO     | all workflow threads have been joined
[2025-07-27 17:38:16] 2025-07-27 21:37:58,594 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 17:38:16] 2025-07-27 21:37:58,594 | INFO     | traces error code: 0
[2025-07-27 17:38:16] 2025-07-27 21:37:58,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 17:38:16] 2025-07-27 21:38:16,338 | INFO     | PID=3621 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 17:38:16] 2025-07-27 21:38:16,338 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 17:38:16] 2025-07-27 21:38:16,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 17:38:16] 2025-07-27 21:38:16,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 17:38:16] 2025-07-27 21:38:16,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 17:38:16] 2025-07-27 21:38:16,339 | INFO     | [monitor] control thread has ended
[2025-07-27 17:38:16] 2025-07-27 21:38:16,431 [wrapper] ==== pilot stdout END ====
[2025-07-27 17:38:16] 2025-07-27 21:38:16,434 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 17:38:16] 2025-07-27 21:38:16,438 [wrapper] pilotpid: 3621
[2025-07-27 17:38:16] 2025-07-27 21:38:16,441 [wrapper] Pilot exit status: 0
[2025-07-27 17:38:16] 2025-07-27 21:38:16,457 [wrapper] pandaids: 6747411010
[2025-07-27 17:38:16] 2025-07-27 21:38:16,499 [wrapper] cleanup supervisor_pilot 19900 3622
[2025-07-27 17:38:16] 2025-07-27 21:38:16,503 [wrapper] Test setup, not cleaning
[2025-07-27 17:38:16] 2025-07-27 21:38:16,507 [wrapper] apfmon messages muted
[2025-07-27 17:38:16] 2025-07-27 21:38:16,510 [wrapper] ==== wrapper stdout END ====
[2025-07-27 17:38:16] 2025-07-27 21:38:16,514 [wrapper] ==== wrapper stderr END ====
[2025-07-27 17:38:16]  *** Error codes and diagnostics ***
[2025-07-27 17:38:16]     "exeErrorCode": 0,
[2025-07-27 17:38:16]     "exeErrorDiag": "",
[2025-07-27 17:38:16]     "pilotErrorCode": 0,
[2025-07-27 17:38:16]     "pilotErrorDiag": "",
[2025-07-27 17:38:16]  *** Listing of results directory ***
[2025-07-27 17:38:16] total 356112
[2025-07-27 17:38:16] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 07:59 pilot3.tar.gz
[2025-07-27 17:38:16] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 08:24 queuedata.json
[2025-07-27 17:38:16] -rwx------ 1 boincer umatlas     36292 Jul 27 08:24 runpilot2-wrapper.sh
[2025-07-27 17:38:16] -rw-r--r-- 1 boincer umatlas       100 Jul 27 16:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 17:38:16] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 16:15 run_atlas
[2025-07-27 17:38:16] -rw-r--r-- 1 boincer umatlas       105 Jul 27 16:15 job.xml
[2025-07-27 17:38:16] -rw-r--r-- 2 boincer umatlas 150235050 Jul 27 16:15 EVNT.45743347._002675.pool.root.1
[2025-07-27 17:38:16] -rw-r--r-- 2 boincer umatlas    542897 Jul 27 16:15 input.tar.gz
[2025-07-27 17:38:16] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 16:15 start_atlas.sh
[2025-07-27 17:38:16] drwxrwx--x 2 boincer umatlas      4096 Jul 27 16:15 shared
[2025-07-27 17:38:16] -rw-r--r-- 1 boincer umatlas         0 Jul 27 16:15 boinc_lockfile
[2025-07-27 17:38:16] -rw-r--r-- 1 boincer umatlas      2563 Jul 27 16:15 pandaJob.out
[2025-07-27 17:38:16] -rw------- 1 boincer umatlas    980109 Jul 27 16:16 agis_schedconf.cvmfs.json
[2025-07-27 17:38:16] -rw------- 1 boincer umatlas   1593052 Jul 27 16:16 agis_ddmendpoints.agis.ALL.json
[2025-07-27 17:38:16] drwx------ 4 boincer umatlas      4096 Jul 27 16:16 pilot3
[2025-07-27 17:38:16] -rw-r--r-- 1 boincer umatlas      5867 Jul 27 17:27 init_data.xml
[2025-07-27 17:38:16] -rw------- 1 boincer umatlas 208884411 Jul 27 17:37 HITS.45743349._048289.pool.root.1
[2025-07-27 17:38:16] -rw------- 1 boincer umatlas      1049 Jul 27 17:37 memory_monitor_summary.json
[2025-07-27 17:38:16] -rw-r--r-- 1 boincer umatlas       529 Jul 27 17:37 boinc_task_state.xml
[2025-07-27 17:38:16] -rw------- 1 boincer umatlas    364770 Jul 27 17:37 log.45743349._048289.job.log.tgz.1
[2025-07-27 17:38:16] -rw------- 1 boincer umatlas      7851 Jul 27 17:37 heartbeat.json
[2025-07-27 17:38:16] -rw-r--r-- 1 boincer umatlas        27 Jul 27 17:38 wrapper_checkpoint.txt
[2025-07-27 17:38:16] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 17:38 boinc_mmap_file
[2025-07-27 17:38:16] -rw------- 1 boincer umatlas        95 Jul 27 17:38 pilot_heartbeat.json
[2025-07-27 17:38:16] -rw------- 1 boincer umatlas       744 Jul 27 17:38 pilotlog.txt
[2025-07-27 17:38:16] -rw------- 1 boincer umatlas    465062 Jul 27 17:38 log.45743349._048289.job.log.1
[2025-07-27 17:38:16] -rw------- 1 boincer umatlas       357 Jul 27 17:38 output.list
[2025-07-27 17:38:16] -rw-r--r-- 1 boincer umatlas       620 Jul 27 17:38 runtime_log
[2025-07-27 17:38:16] -rw------- 1 boincer umatlas    849920 Jul 27 17:38 result.tar.gz
[2025-07-27 17:38:16] -rw------- 1 boincer umatlas       658 Jul 27 17:38 TVSLDmQbF07n9Rq4apOajLDm4fhM0noT9bVof3QYDmmX2KDmrUS3Nn.diag
[2025-07-27 17:38:16] -rw-r--r-- 1 boincer umatlas      8657 Jul 27 17:38 runtime_log.err
[2025-07-27 17:38:16] -rw-r--r-- 1 boincer umatlas     21519 Jul 27 17:38 stderr.txt
[2025-07-27 17:38:16] HITS file was successfully produced:
[2025-07-27 17:38:16] -rw------- 1 boincer umatlas 208884411 Jul 27 17:37 shared/HITS.pool.root.1
[2025-07-27 17:38:16]  *** Contents of shared directory: ***
[2025-07-27 17:38:16] total 352092
[2025-07-27 17:38:16] -rw-r--r-- 2 boincer umatlas 150235050 Jul 27 16:15 ATLAS.root_0
[2025-07-27 17:38:16] -rw-r--r-- 2 boincer umatlas    542897 Jul 27 16:15 input.tar.gz
[2025-07-27 17:38:16] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 16:15 start_atlas.sh
[2025-07-27 17:38:16] -rw------- 1 boincer umatlas 208884411 Jul 27 17:37 HITS.pool.root.1
[2025-07-27 17:38:16] -rw------- 1 boincer umatlas    849920 Jul 27 17:38 result.tar.gz
17:38:18 (32263): run_atlas exited; CPU time 53149.416124
17:38:18 (32263): called boinc_finish(0)

</stderr_txt>
]]>

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