Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:10:09 (1655116): wrapper (7.7.26015): starting
17:10:09 (1655116): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 17:10:09] Arguments: --nthreads 12
[2025-07-27 17:10:09] Threads: 12
[2025-07-27 17:10:09] Checking for CVMFS
[2025-07-27 17:10:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:10:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:10:09] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:10:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:10:10] 2.13.1.0 407057 13970 305924 148823 1 615 40326401 40960001 9603 16776704 0 25136946 99.676 40852492 35337 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 17:10:10] CVMFS is ok
[2025-07-27 17:10:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:10:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:10:10] Further information can be found at the LHC@home message board.
[2025-07-27 17:10:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:10:10] Checking for apptainer binary...
[2025-07-27 17:10:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:10:10] Running /usr/bin/apptainer --version
[2025-07-27 17:10:10] apptainer version 1.4.1-1.el9
[2025-07-27 17:10:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:10:10] c-210-31-3.aglt2.org
[2025-07-27 17:10:10] apptainer works
[2025-07-27 17:10:10] Set ATHENA_PROC_NUMBER=12
[2025-07-27 17:10:10] Set ATHENA_CORE_NUMBER=12
[2025-07-27 17:10:10] Starting ATLAS job with PandaID=6747415830
[2025-07-27 17:10:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 18:20:59]  *** The last 200 lines of the pilot log: ***
[2025-07-27 18:20:59]  is_tar=False
[2025-07-27 18:20:59]  lfn=log.45743349._050334.job.log.tgz.1
[2025-07-27 18:20:59]  mtime=0
[2025-07-27 18:20:59]  protocol_id=None
[2025-07-27 18:20:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 18:20:59]  replicas=None
[2025-07-27 18:20:59]  scope=mc23_13p6TeV
[2025-07-27 18:20:59]  status=None
[2025-07-27 18:20:59]  status_code=0
[2025-07-27 18:20:59]  storage_token=
[2025-07-27 18:20:59]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747415830/log.45743349._050334.job.log.tgz.1
[2025-07-27 18:20:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/0e/log.45743349._050334.job.log.tgz.1
[2025-07-27 18:20:59]  workdir=None
[2025-07-27 18:20:59] ]
[2025-07-27 18:20:59] 2025-07-27 22:20:21,406 | INFO     | transferring file log.45743349._050334.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747415830/log.45743349._050334.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 18:20:59] 2025-07-27 22:20:21,406 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747415830/log.45743349._050334.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._050334.job
[2025-07-27 18:20:59] 2025-07-27 22:20:21,422 | INFO     | adding to output.list: log.45743349._050334.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/0e/log.45743349._050334.job.log.tg
[2025-07-27 18:20:59] 2025-07-27 22:20:21,423 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 18:20:59] 2025-07-27 22:20:21,423 | INFO     | summary of transferred files:
[2025-07-27 18:20:59] 2025-07-27 22:20:21,423 | INFO     |  -- lfn=log.45743349._050334.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 18:20:59] 2025-07-27 22:20:21,423 | INFO     | stage-out finished correctly
[2025-07-27 18:20:59] 2025-07-27 22:20:21,587 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 18:20:59] 2025-07-27 22:20:21,753 | WARNING  | process 1665636 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 18:20:59] 2025-07-27 22:20:21,753 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747415830/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:20:59] 2025-07-27 22:20:21,940 | INFO     | number of running child processes to parent process 1665636: 1
[2025-07-27 18:20:59] 2025-07-27 22:20:21,940 | INFO     | maximum number of monitored processes: 6
[2025-07-27 18:20:59] 2025-07-27 22:20:23,096 | INFO     | job 6747415830 has state=finished
[2025-07-27 18:20:59] 2025-07-27 22:20:23,096 | INFO     | preparing for final server update for job 6747415830 in state='finished'
[2025-07-27 18:20:59] 2025-07-27 22:20:23,096 | INFO     | this job has now completed (state=finished)
[2025-07-27 18:20:59] 2025-07-27 22:20:23,096 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 18:20:59] 2025-07-27 22:20:23,097 | INFO     | log transfer has been attempted: DONE
[2025-07-27 18:20:59] 2025-07-27 22:20:23,097 | INFO     | job 6747415830 has finished - writing final server update
[2025-07-27 18:20:59] 2025-07-27 22:20:23,097 | INFO     | total number of processed events: 400 (read)
[2025-07-27 18:20:59] 2025-07-27 22:20:23,097 | INFO     | executing command: lscpu
[2025-07-27 18:20:59] 2025-07-27 22:20:23,150 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 18:20:59] 2025-07-27 22:20:24,443 | INFO     | monitor loop #311: job 0:6747415830 is in state 'finished'
[2025-07-27 18:20:59] 2025-07-27 22:20:24,443 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:20:59] 2025-07-27 22:20:26,759 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 18:20:59] 2025-07-27 22:20:26,762 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2715.661982142857
[2025-07-27 18:20:59] 2025-07-27 22:20:26,771 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747415830/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:20:59] 2025-07-27 22:20:26,772 | INFO     | extracted standard info from prmon json
[2025-07-27 18:20:59] 2025-07-27 22:20:26,772 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 18:20:59] 2025-07-27 22:20:26,772 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 18:20:59] 2025-07-27 22:20:26,772 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 18:20:59] 2025-07-27 22:20:26,772 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 18:20:59] 2025-07-27 22:20:26,773 | INFO     | fitting pss+swap vs Time
[2025-07-27 18:20:59] 2025-07-27 22:20:26,773 | INFO     | sum of square deviations: 73882315.5
[2025-07-27 18:20:59] 2025-07-27 22:20:26,773 | INFO     | sum of deviations: 252277090.0
[2025-07-27 18:20:59] 2025-07-27 22:20:26,773 | INFO     | mean x: 1753652820.5
[2025-07-27 18:20:59] 2025-07-27 22:20:26,774 | INFO     | mean y: 2738262.5161290322
[2025-07-27 18:20:59] 2025-07-27 22:20:26,774 | INFO     | -- intersect: -5985249897.194869
[2025-07-27 18:20:59] 2025-07-27 22:20:26,774 | INFO     | intersect: -5985249897.194869
[2025-07-27 18:20:59] 2025-07-27 22:20:26,774 | INFO     | chi2: 0.013704880492631381
[2025-07-27 18:20:59] 2025-07-27 22:20:26,774 | INFO     | -- intersect: -5985249897.194869
[2025-07-27 18:20:59] 2025-07-27 22:20:26,774 | INFO     | current memory leak: 3.41 B/s (using 62 data points, chi2=0.01)
[2025-07-27 18:20:59] 2025-07-27 22:20:26,774 | INFO     | could have reported an average CPU frequency of 2759 MHz (6 samples)
[2025-07-27 18:20:59] 2025-07-27 22:20:26,774 | INFO     | ..............................
[2025-07-27 18:20:59] 2025-07-27 22:20:26,774 | INFO     | . Timing measurements:
[2025-07-27 18:20:59] 2025-07-27 22:20:26,774 | INFO     | . get job = 0 s
[2025-07-27 18:20:59] 2025-07-27 22:20:26,774 | INFO     | . initial setup = 2 s
[2025-07-27 18:20:59] 2025-07-27 22:20:26,774 | INFO     | . payload setup = 8 s
[2025-07-27 18:20:59] 2025-07-27 22:20:26,774 | INFO     | . stage-in = 0 s
[2025-07-27 18:20:59] 2025-07-27 22:20:26,774 | INFO     | . payload execution = 4166 s
[2025-07-27 18:20:59] 2025-07-27 22:20:26,775 | INFO     | . stage-out = 0 s
[2025-07-27 18:20:59] 2025-07-27 22:20:26,775 | INFO     | . log creation = 0 s
[2025-07-27 18:20:59] 2025-07-27 22:20:26,775 | INFO     | ..............................
[2025-07-27 18:20:59] 2025-07-27 22:20:26,908 | INFO     | 
[2025-07-27 18:20:59] 2025-07-27 22:20:26,908 | INFO     | job summary report
[2025-07-27 18:20:59] 2025-07-27 22:20:26,908 | INFO     | --------------------------------------------------
[2025-07-27 18:20:59] 2025-07-27 22:20:26,908 | INFO     | PanDA job id: 6747415830
[2025-07-27 18:20:59] 2025-07-27 22:20:26,908 | INFO     | task id: 45743349
[2025-07-27 18:20:59] 2025-07-27 22:20:26,908 | INFO     | errors: (none)
[2025-07-27 18:20:59] 2025-07-27 22:20:26,908 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 18:20:59] 2025-07-27 22:20:26,908 | INFO     | pilot state: finished 
[2025-07-27 18:20:59] 2025-07-27 22:20:26,909 | INFO     | transexitcode: 0
[2025-07-27 18:20:59] 2025-07-27 22:20:26,909 | INFO     | exeerrorcode: 0
[2025-07-27 18:20:59] 2025-07-27 22:20:26,909 | INFO     | exeerrordiag: 
[2025-07-27 18:20:59] 2025-07-27 22:20:26,909 | INFO     | exitcode: 0
[2025-07-27 18:20:59] 2025-07-27 22:20:26,909 | INFO     | exitmsg: OK
[2025-07-27 18:20:59] 2025-07-27 22:20:26,909 | INFO     | cpuconsumptiontime: 43376 s
[2025-07-27 18:20:59] 2025-07-27 22:20:26,909 | INFO     | nevents: 400
[2025-07-27 18:20:59] 2025-07-27 22:20:26,909 | INFO     | neventsw: 0
[2025-07-27 18:20:59] 2025-07-27 22:20:26,909 | INFO     | pid: 1665636
[2025-07-27 18:20:59] 2025-07-27 22:20:26,909 | INFO     | pgrp: 1665636
[2025-07-27 18:20:59] 2025-07-27 22:20:26,909 | INFO     | corecount: 12
[2025-07-27 18:20:59] 2025-07-27 22:20:26,909 | INFO     | event service: False
[2025-07-27 18:20:59] 2025-07-27 22:20:26,909 | INFO     | sizes: {0: 2397425, 1: 2397425, 6: 2397715, 11: 2397743, 4178: 2423583, 4180: 2432581, 4181: 2432765, 4186: 2432959}
[2025-07-27 18:20:59] 2025-07-27 22:20:26,909 | INFO     | --------------------------------------------------
[2025-07-27 18:20:59] 2025-07-27 22:20:26,909 | INFO     | 
[2025-07-27 18:20:59] 2025-07-27 22:20:26,909 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 18:20:59] 2025-07-27 22:20:26,926 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,927 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,927 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,927 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,927 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,927 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,927 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,927 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,927 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,927 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,927 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,927 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,928 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,928 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,928 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,928 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,928 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,928 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 18:20:59] 2025-07-27 22:20:26,928 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,928 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 18:20:59] 2025-07-27 22:20:26,928 | INFO     | job 6747415830 has completed (purged errors)
[2025-07-27 18:20:59] 2025-07-27 22:20:26,928 | INFO     | overall cleanup function is called
[2025-07-27 18:20:59] 2025-07-27 22:20:27,936 | INFO     | --- collectZombieJob: --- 10, [1665636]
[2025-07-27 18:20:59] 2025-07-27 22:20:27,936 | INFO     | zombie collector waiting for pid 1665636
[2025-07-27 18:20:59] 2025-07-27 22:20:27,936 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 18:20:59] 2025-07-27 22:20:27,936 | INFO     | collected zombie processes
[2025-07-27 18:20:59] 2025-07-27 22:20:27,937 | INFO     | will attempt to kill all subprocesses of pid=1665636
[2025-07-27 18:20:59] 2025-07-27 22:20:28,138 | INFO     | process IDs to be killed: [1665636] (in reverse order)
[2025-07-27 18:20:59] 2025-07-27 22:20:28,213 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 18:20:59] 2025-07-27 22:20:28,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 18:20:59] 2025-07-27 22:20:28,222 | INFO     | did not find any defunct processes belonging to 1665636
[2025-07-27 18:20:59] 2025-07-27 22:20:28,229 | INFO     | did not find any defunct processes belonging to 1665636
[2025-07-27 18:20:59] 2025-07-27 22:20:28,229 | INFO     | ready for new job
[2025-07-27 18:20:59] 2025-07-27 22:20:28,229 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 18:20:59] 2025-07-27 22:20:28,231 | INFO     | ***************************************
[2025-07-27 18:20:59] 2025-07-27 22:20:28,231 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 18:20:59] 2025-07-27 22:20:28,231 | INFO     | ***************************************
[2025-07-27 18:20:59] 2025-07-27 22:20:28,231 | INFO     | 
[2025-07-27 18:20:59] 2025-07-27 22:20:28,234 | INFO     | architecture information:
[2025-07-27 18:20:59] 2025-07-27 22:20:28,235 | INFO     | executing command: cat /etc/os-release
[2025-07-27 18:20:59] 2025-07-27 22:20:28,247 | INFO     | cat /etc/os-release:
[2025-07-27 18:20:59] NAME="CentOS Linux"
[2025-07-27 18:20:59] VERSION="7 (Core)"
[2025-07-27 18:20:59] ID="centos"
[2025-07-27 18:20:59] ID_LIKE="rhel fedora"
[2025-07-27 18:20:59] VERSION_ID="7"
[2025-07-27 18:20:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 18:20:59] ANSI_COLOR="0;31"
[2025-07-27 18:20:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 18:20:59] HOME_URL="https://www.centos.org/"
[2025-07-27 18:20:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 18:20:59] 
[2025-07-27 18:20:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 18:20:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 18:20:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 18:20:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 18:20:59] 
[2025-07-27 18:20:59] 2025-07-27 22:20:28,247 | INFO     | ***************************************
[2025-07-27 18:20:59] 2025-07-27 22:20:28,750 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 18:20:59] 2025-07-27 22:20:28,763 | INFO     | sufficient remaining disk space (75448188928 B)
[2025-07-27 18:20:59] 2025-07-27 22:20:28,764 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 18:20:59] 2025-07-27 22:20:28,764 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 18:20:59] 2025-07-27 22:20:28,764 | INFO     | update_server=False
[2025-07-27 18:20:59] 2025-07-27 22:20:28,764 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 18:20:59] 2025-07-27 22:20:28,764 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:20:59] 2025-07-27 22:20:28,764 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:20:59] 2025-07-27 22:20:28,765 | INFO     | aborting loop
[2025-07-27 18:20:59] 2025-07-27 22:20:28,778 | INFO     | all data control threads have been joined
[2025-07-27 18:20:59] 2025-07-27 22:20:28,789 | INFO     | all payload control threads have been joined
[2025-07-27 18:20:59] 2025-07-27 22:20:29,501 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 18:20:59] 2025-07-27 22:20:29,692 | INFO     | all job control threads have been joined
[2025-07-27 18:20:59] 2025-07-27 22:20:29,769 | INFO     | [job] retrieve thread has finished
[2025-07-27 18:20:59] 2025-07-27 22:20:29,770 | INFO     | [job] queue monitor thread has finished
[2025-07-27 18:20:59] 2025-07-27 22:20:29,770 | INFO     | [job] job monitor thread has finished
[2025-07-27 18:20:59] 2025-07-27 22:20:29,783 | INFO     | [data] control thread has finished
[2025-07-27 18:20:59] 2025-07-27 22:20:29,794 | INFO     | [payload] control thread has finished
[2025-07-27 18:20:59] 2025-07-27 22:20:29,826 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 18:20:59] 2025-07-27 22:20:30,004 | INFO     | [data] copytool_in thread has finished
[2025-07-27 18:20:59] 2025-07-27 22:20:30,031 | INFO     | [payload] validate_post thread has finished
[2025-07-27 18:20:59] 2025-07-27 22:20:30,255 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 18:20:59] 2025-07-27 22:20:30,426 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 18:20:59] 2025-07-27 22:20:30,438 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 18:20:59] 2025-07-27 22:20:30,697 | INFO     | [job] control thread has finished
[2025-07-27 18:20:59] 2025-07-27 22:20:31,115 | INFO     | [job] validate thread has finished
[2025-07-27 18:20:59] 2025-07-27 22:20:31,136 | INFO     | [payload] failed_post thread has finished
[2025-07-27 18:20:59] 2025-07-27 22:20:31,506 | INFO     | [data] copytool_out thread has finished
[2025-07-27 18:20:59] 2025-07-27 22:20:32,163 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 18:20:59] 2025-07-27 22:20:36,168 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 18:20:59] 2025-07-27 22:20:36,183 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705939920704)>', '<ExcThread(monitor, started 139705018480384)>']
[2025-07-27 18:20:59] 2025-07-27 22:20:41,208 | INFO     | all workflow threads have been joined
[2025-07-27 18:20:59] 2025-07-27 22:20:41,208 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 18:20:59] 2025-07-27 22:20:41,208 | INFO     | traces error code: 0
[2025-07-27 18:20:59] 2025-07-27 22:20:41,208 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 18:20:59] 2025-07-27 22:20:59,426 | INFO     | PID=1658884 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 18:20:59] 2025-07-27 22:20:59,426 | INFO     | .. there are 15 such processes running
[2025-07-27 18:20:59] 2025-07-27 22:20:59,427 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 18:20:59] 2025-07-27 22:20:59,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 18:20:59] 2025-07-27 22:20:59,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 18:20:59] 2025-07-27 22:20:59,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 18:20:59] 2025-07-27 22:20:59,427 | INFO     | [monitor] control thread has ended
[2025-07-27 18:20:59] 2025-07-27 22:20:59,533 [wrapper] ==== pilot stdout END ====
[2025-07-27 18:20:59] 2025-07-27 22:20:59,536 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 18:20:59] 2025-07-27 22:20:59,539 [wrapper] pilotpid: 1658884
[2025-07-27 18:20:59] 2025-07-27 22:20:59,542 [wrapper] Pilot exit status: 0
[2025-07-27 18:20:59] 2025-07-27 22:20:59,551 [wrapper] pandaids: 6747415830
[2025-07-27 18:20:59] 2025-07-27 22:20:59,598 [wrapper] cleanup supervisor_pilot 1820718 1658885
[2025-07-27 18:20:59] 2025-07-27 22:20:59,601 [wrapper] Test setup, not cleaning
[2025-07-27 18:20:59] 2025-07-27 22:20:59,604 [wrapper] apfmon messages muted
[2025-07-27 18:20:59] 2025-07-27 22:20:59,606 [wrapper] ==== wrapper stdout END ====
[2025-07-27 18:20:59] 2025-07-27 22:20:59,608 [wrapper] ==== wrapper stderr END ====
[2025-07-27 18:20:59]  *** Error codes and diagnostics ***
[2025-07-27 18:20:59]     "exeErrorCode": 0,
[2025-07-27 18:20:59]     "exeErrorDiag": "",
[2025-07-27 18:20:59]     "pilotErrorCode": 0,
[2025-07-27 18:20:59]     "pilotErrorDiag": "",
[2025-07-27 18:20:59]  *** Listing of results directory ***
[2025-07-27 18:20:59] total 348456
[2025-07-27 18:20:59] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 10:52 queuedata.json
[2025-07-27 18:20:59] -rwx------. 1 boincer umatlas     36292 Jul 27 10:53 runpilot2-wrapper.sh
[2025-07-27 18:20:59] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 10:53 pilot3.tar.gz
[2025-07-27 18:20:59] -rw-r--r--. 1 boincer umatlas       100 Jul 27 17:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 18:20:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 17:10 run_atlas
[2025-07-27 18:20:59] -rw-r--r--. 1 boincer umatlas       105 Jul 27 17:10 job.xml
[2025-07-27 18:20:59] -rw-r--r--. 2 boincer umatlas 143206097 Jul 27 17:10 EVNT.45743347._001882.pool.root.1
[2025-07-27 18:20:59] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:10 start_atlas.sh
[2025-07-27 18:20:59] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 17:10 shared
[2025-07-27 18:20:59] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 17:10 input.tar.gz
[2025-07-27 18:20:59] -rw-r--r--. 1 boincer umatlas         0 Jul 27 17:10 boinc_lockfile
[2025-07-27 18:20:59] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 17:10 pandaJob.out
[2025-07-27 18:20:59] -rw-------. 1 boincer umatlas    980109 Jul 27 17:10 agis_schedconf.cvmfs.json
[2025-07-27 18:20:59] -rw-------. 1 boincer umatlas   1593052 Jul 27 17:10 agis_ddmendpoints.agis.ALL.json
[2025-07-27 18:20:59] drwx------. 4 boincer umatlas      4096 Jul 27 17:10 pilot3
[2025-07-27 18:20:59] -rw-r--r--. 1 boincer umatlas      6841 Jul 27 18:11 init_data.xml
[2025-07-27 18:20:59] -rw-------. 1 boincer umatlas 208182980 Jul 27 18:19 HITS.45743349._050334.pool.root.1
[2025-07-27 18:20:59] -rw-r--r--. 1 boincer umatlas       529 Jul 27 18:19 boinc_task_state.xml
[2025-07-27 18:20:59] -rw-------. 1 boincer umatlas      1037 Jul 27 18:20 memory_monitor_summary.json
[2025-07-27 18:20:59] -rw-------. 1 boincer umatlas    354935 Jul 27 18:20 log.45743349._050334.job.log.tgz.1
[2025-07-27 18:20:59] -rw-------. 1 boincer umatlas      7823 Jul 27 18:20 heartbeat.json
[2025-07-27 18:20:59] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 18:20 boinc_mmap_file
[2025-07-27 18:20:59] -rw-r--r--. 1 boincer umatlas        27 Jul 27 18:20 wrapper_checkpoint.txt
[2025-07-27 18:20:59] -rw-------. 1 boincer umatlas        95 Jul 27 18:20 pilot_heartbeat.json
[2025-07-27 18:20:59] -rw-------. 1 boincer umatlas       823 Jul 27 18:20 pilotlog.txt
[2025-07-27 18:20:59] -rw-------. 1 boincer umatlas    423711 Jul 27 18:20 log.45743349._050334.job.log.1
[2025-07-27 18:20:59] -rw-------. 1 boincer umatlas       357 Jul 27 18:20 output.list
[2025-07-27 18:20:59] -rw-r--r--. 1 boincer umatlas       620 Jul 27 18:20 runtime_log
[2025-07-27 18:20:59] -rw-------. 1 boincer umatlas    798720 Jul 27 18:20 result.tar.gz
[2025-07-27 18:20:59] -rw-r--r--. 1 boincer umatlas      8672 Jul 27 18:20 runtime_log.err
[2025-07-27 18:20:59] -rw-------. 1 boincer umatlas       656 Jul 27 18:20 QMtNDmZvH07n9Rq4apOajLDm4fhM0noT9bVof3QYDmth2KDm3iSRZn.diag
[2025-07-27 18:20:59] -rw-r--r--. 1 boincer umatlas     21619 Jul 27 18:20 stderr.txt
[2025-07-27 18:20:59] HITS file was successfully produced:
[2025-07-27 18:20:59] -rw-------. 1 boincer umatlas 208182980 Jul 27 18:19 shared/HITS.pool.root.1
[2025-07-27 18:20:59]  *** Contents of shared directory: ***
[2025-07-27 18:20:59] total 344488
[2025-07-27 18:20:59] -rw-r--r--. 2 boincer umatlas 143206097 Jul 27 17:10 ATLAS.root_0
[2025-07-27 18:20:59] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:10 start_atlas.sh
[2025-07-27 18:20:59] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 17:10 input.tar.gz
[2025-07-27 18:20:59] -rw-------. 1 boincer umatlas 208182980 Jul 27 18:19 HITS.pool.root.1
[2025-07-27 18:20:59] -rw-------. 1 boincer umatlas    798720 Jul 27 18:20 result.tar.gz
18:21:00 (1655116): run_atlas exited; CPU time 43440.148883
18:21:00 (1655116): called boinc_finish(0)

</stderr_txt>
]]>

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