Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:04:50 (32196): wrapper (7.7.26015): starting
16:04:50 (32196): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 16:04:50] Arguments: --nthreads 8
[2025-07-27 16:04:50] Threads: 8
[2025-07-27 16:04:50] Checking for CVMFS
[2025-07-27 16:04:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 16:04:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 16:04:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 16:04:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 16:04:50] 2.11.2.0 1598 105779 117960 148822 0 188 20191251 20275201 917 130560 0 75193544 99.986 8201346 9295 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 16:04:50] CVMFS is ok
[2025-07-27 16:04:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 16:04:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 16:04:50] Further information can be found at the LHC@home message board.
[2025-07-27 16:04:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 16:04:50] Checking for apptainer binary...
[2025-07-27 16:04:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 16:04:50] Running /usr/bin/apptainer --version
[2025-07-27 16:04:50] apptainer version 1.3.2-1.el7
[2025-07-27 16:04:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 16:04:51] c-205-36.aglt2.org
[2025-07-27 16:04:51] apptainer works
[2025-07-27 16:04:51] Set ATHENA_PROC_NUMBER=8
[2025-07-27 16:04:51] Set ATHENA_CORE_NUMBER=8
[2025-07-27 16:04:51] Starting ATLAS job with PandaID=6747414794
[2025-07-27 16:04:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 17:23:33]  *** The last 200 lines of the pilot log: ***
[2025-07-27 17:23:33]  scope=mc23_13p6TeV
[2025-07-27 17:23:33]  status=None
[2025-07-27 17:23:33]  status_code=0
[2025-07-27 17:23:33]  storage_token=
[2025-07-27 17:23:33]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6747414794/log.45743349._050328.job.log.tgz.1
[2025-07-27 17:23:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/b0/log.45743349._050328.job.log.tgz.1
[2025-07-27 17:23:33]  workdir=None
[2025-07-27 17:23:33] ]
[2025-07-27 17:23:33] 2025-07-27 21:22:52,067 | INFO     | monitor loop #349: job 0:6747414794 is in state 'stageout'
[2025-07-27 17:23:33] 2025-07-27 21:22:52,072 | WARNING  | aborting job monitor tasks since payload process 10966 is not running
[2025-07-27 17:23:33] 2025-07-27 21:22:52,081 | INFO     | transferring file log.45743349._050328.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6747414794/log.45743349._050328.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 17:23:33] 2025-07-27 21:22:52,081 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6747414794/log.45743349._050328.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._050328.job
[2025-07-27 17:23:33] 2025-07-27 21:22:52,099 | INFO     | adding to output.list: log.45743349._050328.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/b0/log.45743349._050328.job.log.tg
[2025-07-27 17:23:33] 2025-07-27 21:22:52,101 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 17:23:33] 2025-07-27 21:22:52,101 | INFO     | summary of transferred files:
[2025-07-27 17:23:33] 2025-07-27 21:22:52,101 | INFO     |  -- lfn=log.45743349._050328.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 17:23:33] 2025-07-27 21:22:52,101 | INFO     | stage-out finished correctly
[2025-07-27 17:23:33] 2025-07-27 21:22:54,584 | INFO     | monitor loop #350: job 0:6747414794 is in state 'finished'
[2025-07-27 17:23:33] 2025-07-27 21:22:54,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:23:33] 2025-07-27 21:22:54,755 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 17:23:33] 2025-07-27 21:22:56,344 | INFO     | job 6747414794 has state=finished
[2025-07-27 17:23:33] 2025-07-27 21:22:56,344 | INFO     | preparing for final server update for job 6747414794 in state='finished'
[2025-07-27 17:23:33] 2025-07-27 21:22:56,409 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-27 17:23:33] 2025-07-27 21:22:56,409 | INFO     | this job has now completed (state=finished)
[2025-07-27 17:23:33] 2025-07-27 21:22:56,409 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 17:23:33] 2025-07-27 21:22:56,409 | INFO     | log transfer has been attempted: DONE
[2025-07-27 17:23:33] 2025-07-27 21:22:56,410 | INFO     | job 6747414794 has finished - writing final server update
[2025-07-27 17:23:33] 2025-07-27 21:22:56,410 | INFO     | total number of processed events: 400 (read)
[2025-07-27 17:23:33] 2025-07-27 21:22:56,411 | INFO     | executing command: lscpu
[2025-07-27 17:23:33] 2025-07-27 21:22:56,443 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 17:23:33] 2025-07-27 21:22:57,088 | INFO     | monitor loop #351: job 0:6747414794 is in state 'finished'
[2025-07-27 17:23:33] 2025-07-27 21:22:57,088 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:23:33] 2025-07-27 21:22:59,591 | INFO     | monitor loop #352: job 0:6747414794 is in state 'finished'
[2025-07-27 17:23:33] 2025-07-27 21:22:59,591 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:23:33] 2025-07-27 21:23:00,558 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 17:23:33] 2025-07-27 21:23:00,565 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2067.1594999999998
[2025-07-27 17:23:33] 2025-07-27 21:23:00,568 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747414794/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:23:33] 2025-07-27 21:23:00,569 | INFO     | extracted standard info from prmon json
[2025-07-27 17:23:33] 2025-07-27 21:23:00,569 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 17:23:33] 2025-07-27 21:23:00,569 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 17:23:33] 2025-07-27 21:23:00,570 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 17:23:33] 2025-07-27 21:23:00,570 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 17:23:33] 2025-07-27 21:23:00,571 | INFO     | fitting pss+swap vs Time
[2025-07-27 17:23:33] 2025-07-27 21:23:00,572 | INFO     | sum of square deviations: 106336877.5
[2025-07-27 17:23:33] 2025-07-27 21:23:00,572 | INFO     | sum of deviations: 1100206735.9999995
[2025-07-27 17:23:33] 2025-07-27 21:23:00,572 | INFO     | mean x: 1753649138.5
[2025-07-27 17:23:33] 2025-07-27 21:23:00,572 | INFO     | mean y: 2516155.685714286
[2025-07-27 17:23:33] 2025-07-27 21:23:00,572 | INFO     | -- intersect: -18141486565.837643
[2025-07-27 17:23:33] 2025-07-27 21:23:00,573 | INFO     | intersect: -18141486565.837643
[2025-07-27 17:23:33] 2025-07-27 21:23:00,573 | INFO     | chi2: 0.009894905436551856
[2025-07-27 17:23:33] 2025-07-27 21:23:00,573 | INFO     | -- intersect: -18141486565.837643
[2025-07-27 17:23:33] 2025-07-27 21:23:00,573 | INFO     | current memory leak: 10.35 B/s (using 70 data points, chi2=0.01)
[2025-07-27 17:23:33] 2025-07-27 21:23:00,574 | INFO     | could have reported an average CPU frequency of 2246 MHz (6 samples)
[2025-07-27 17:23:33] 2025-07-27 21:23:00,574 | INFO     | ..............................
[2025-07-27 17:23:33] 2025-07-27 21:23:00,574 | INFO     | . Timing measurements:
[2025-07-27 17:23:33] 2025-07-27 21:23:00,574 | INFO     | . get job = 0 s
[2025-07-27 17:23:33] 2025-07-27 21:23:00,574 | INFO     | . initial setup = 2 s
[2025-07-27 17:23:33] 2025-07-27 21:23:00,574 | INFO     | . payload setup = 7 s
[2025-07-27 17:23:33] 2025-07-27 21:23:00,574 | INFO     | . stage-in = 0 s
[2025-07-27 17:23:33] 2025-07-27 21:23:00,574 | INFO     | . payload execution = 4641 s
[2025-07-27 17:23:33] 2025-07-27 21:23:00,575 | INFO     | . stage-out = 0 s
[2025-07-27 17:23:33] 2025-07-27 21:23:00,575 | INFO     | . log creation = 0 s
[2025-07-27 17:23:33] 2025-07-27 21:23:00,575 | INFO     | ..............................
[2025-07-27 17:23:33] 2025-07-27 21:23:00,755 | INFO     | PID=3530 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 17:23:33] 2025-07-27 21:23:00,755 | INFO     | .. there are 2 such processes running
[2025-07-27 17:23:33] 2025-07-27 21:23:01,045 | INFO     | 
[2025-07-27 17:23:33] 2025-07-27 21:23:01,045 | INFO     | job summary report
[2025-07-27 17:23:33] 2025-07-27 21:23:01,045 | INFO     | --------------------------------------------------
[2025-07-27 17:23:33] 2025-07-27 21:23:01,045 | INFO     | PanDA job id: 6747414794
[2025-07-27 17:23:33] 2025-07-27 21:23:01,045 | INFO     | task id: 45743349
[2025-07-27 17:23:33] 2025-07-27 21:23:01,046 | INFO     | errors: (none)
[2025-07-27 17:23:33] 2025-07-27 21:23:01,046 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 17:23:33] 2025-07-27 21:23:01,046 | INFO     | pilot state: finished 
[2025-07-27 17:23:33] 2025-07-27 21:23:01,046 | INFO     | transexitcode: 0
[2025-07-27 17:23:33] 2025-07-27 21:23:01,046 | INFO     | exeerrorcode: 0
[2025-07-27 17:23:33] 2025-07-27 21:23:01,046 | INFO     | exeerrordiag: 
[2025-07-27 17:23:33] 2025-07-27 21:23:01,046 | INFO     | exitcode: 0
[2025-07-27 17:23:33] 2025-07-27 21:23:01,046 | INFO     | exitmsg: OK
[2025-07-27 17:23:33] 2025-07-27 21:23:01,046 | INFO     | cpuconsumptiontime: 33945 s
[2025-07-27 17:23:33] 2025-07-27 21:23:01,047 | INFO     | nevents: 400
[2025-07-27 17:23:33] 2025-07-27 21:23:01,047 | INFO     | neventsw: 0
[2025-07-27 17:23:33] 2025-07-27 21:23:01,047 | INFO     | pid: 10966
[2025-07-27 17:23:33] 2025-07-27 21:23:01,047 | INFO     | pgrp: 10966
[2025-07-27 17:23:33] 2025-07-27 21:23:01,047 | INFO     | corecount: 8
[2025-07-27 17:23:33] 2025-07-27 21:23:01,047 | INFO     | event service: False
[2025-07-27 17:23:33] 2025-07-27 21:23:01,047 | INFO     | sizes: {0: 2397425, 4: 2397687, 11: 2397715, 4652: 2424014, 4654: 2433012, 4657: 2433068, 4662: 2433390}
[2025-07-27 17:23:33] 2025-07-27 21:23:01,047 | INFO     | --------------------------------------------------
[2025-07-27 17:23:33] 2025-07-27 21:23:01,047 | INFO     | 
[2025-07-27 17:23:33] 2025-07-27 21:23:01,048 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 17:23:33] 2025-07-27 21:23:01,068 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,069 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,069 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,069 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,069 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,069 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,070 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,070 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,070 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,070 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,070 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,070 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,070 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,070 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,071 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,071 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,071 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 17:23:33] 2025-07-27 21:23:01,071 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,071 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 17:23:33] 2025-07-27 21:23:01,071 | INFO     | job 6747414794 has completed (purged errors)
[2025-07-27 17:23:33] 2025-07-27 21:23:01,072 | INFO     | overall cleanup function is called
[2025-07-27 17:23:33] 2025-07-27 21:23:02,080 | INFO     | --- collectZombieJob: --- 10, [10966]
[2025-07-27 17:23:33] 2025-07-27 21:23:02,080 | INFO     | zombie collector waiting for pid 10966
[2025-07-27 17:23:33] 2025-07-27 21:23:02,080 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 17:23:33] 2025-07-27 21:23:02,080 | INFO     | collected zombie processes
[2025-07-27 17:23:33] 2025-07-27 21:23:02,081 | INFO     | will attempt to kill all subprocesses of pid=10966
[2025-07-27 17:23:33] 2025-07-27 21:23:02,197 | INFO     | process IDs to be killed: [10966] (in reverse order)
[2025-07-27 17:23:33] 2025-07-27 21:23:02,252 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 17:23:33] 2025-07-27 21:23:02,252 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 17:23:33] 2025-07-27 21:23:02,256 | INFO     | did not find any defunct processes belonging to 10966
[2025-07-27 17:23:33] 2025-07-27 21:23:02,260 | INFO     | did not find any defunct processes belonging to 10966
[2025-07-27 17:23:33] 2025-07-27 21:23:02,260 | INFO     | ready for new job
[2025-07-27 17:23:33] 2025-07-27 21:23:02,260 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 17:23:33] 2025-07-27 21:23:02,262 | INFO     | ***************************************
[2025-07-27 17:23:33] 2025-07-27 21:23:02,262 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 17:23:33] 2025-07-27 21:23:02,263 | INFO     | ***************************************
[2025-07-27 17:23:33] 2025-07-27 21:23:02,263 | INFO     | 
[2025-07-27 17:23:33] 2025-07-27 21:23:02,264 | INFO     | architecture information:
[2025-07-27 17:23:33] 2025-07-27 21:23:02,264 | INFO     | executing command: cat /etc/os-release
[2025-07-27 17:23:33] 2025-07-27 21:23:02,278 | INFO     | cat /etc/os-release:
[2025-07-27 17:23:33] NAME="CentOS Linux"
[2025-07-27 17:23:33] VERSION="7 (Core)"
[2025-07-27 17:23:33] ID="centos"
[2025-07-27 17:23:33] ID_LIKE="rhel fedora"
[2025-07-27 17:23:33] VERSION_ID="7"
[2025-07-27 17:23:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 17:23:33] ANSI_COLOR="0;31"
[2025-07-27 17:23:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 17:23:33] HOME_URL="https://www.centos.org/"
[2025-07-27 17:23:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 17:23:33] 
[2025-07-27 17:23:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 17:23:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 17:23:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 17:23:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 17:23:33] 
[2025-07-27 17:23:33] 2025-07-27 21:23:02,279 | INFO     | ***************************************
[2025-07-27 17:23:33] 2025-07-27 21:23:02,782 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 17:23:33] 2025-07-27 21:23:02,799 | INFO     | sufficient remaining disk space (32887537664 B)
[2025-07-27 17:23:33] 2025-07-27 21:23:02,800 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 17:23:33] 2025-07-27 21:23:02,800 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 17:23:33] 2025-07-27 21:23:02,800 | INFO     | update_server=False
[2025-07-27 17:23:33] 2025-07-27 21:23:02,800 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 17:23:33] 2025-07-27 21:23:02,801 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 17:23:33] 2025-07-27 21:23:02,833 | INFO     | all data control threads have been joined
[2025-07-27 17:23:33] 2025-07-27 21:23:03,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:23:33] 2025-07-27 21:23:03,105 | INFO     | aborting loop
[2025-07-27 17:23:33] 2025-07-27 21:23:03,397 | INFO     | all payload control threads have been joined
[2025-07-27 17:23:33] 2025-07-27 21:23:03,805 | INFO     | [job] retrieve thread has finished
[2025-07-27 17:23:33] 2025-07-27 21:23:03,806 | INFO     | [payload] validate_post thread has finished
[2025-07-27 17:23:33] 2025-07-27 21:23:03,831 | INFO     | [data] copytool_in thread has finished
[2025-07-27 17:23:33] 2025-07-27 21:23:03,838 | INFO     | [data] control thread has finished
[2025-07-27 17:23:33] 2025-07-27 21:23:03,885 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 17:23:33] 2025-07-27 21:23:04,110 | INFO     | [job] job monitor thread has finished
[2025-07-27 17:23:33] 2025-07-27 21:23:04,180 | INFO     | all job control threads have been joined
[2025-07-27 17:23:33] 2025-07-27 21:23:04,210 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 17:23:33] 2025-07-27 21:23:04,347 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 17:23:33] 2025-07-27 21:23:04,403 | INFO     | [payload] control thread has finished
[2025-07-27 17:23:33] 2025-07-27 21:23:04,806 | INFO     | [data] copytool_out thread has finished
[2025-07-27 17:23:33] 2025-07-27 21:23:04,813 | INFO     | [payload] failed_post thread has finished
[2025-07-27 17:23:33] 2025-07-27 21:23:05,186 | INFO     | [job] control thread has finished
[2025-07-27 17:23:33] 2025-07-27 21:23:05,212 | INFO     | [job] validate thread has finished
[2025-07-27 17:23:33] 2025-07-27 21:23:05,258 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 17:23:33] 2025-07-27 21:23:05,348 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 17:23:33] 2025-07-27 21:23:05,644 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:23:33] 2025-07-27 21:23:06,650 | INFO     | [job] queue monitor thread has finished
[2025-07-27 17:23:33] 2025-07-27 21:23:09,354 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 17:23:33] 2025-07-27 21:23:10,031 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140425502234432)>', '<ExcThread(monitor, started 140425071412992)>']
[2025-07-27 17:23:33] 2025-07-27 21:23:15,057 | INFO     | all workflow threads have been joined
[2025-07-27 17:23:33] 2025-07-27 21:23:15,057 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 17:23:33] 2025-07-27 21:23:15,058 | INFO     | traces error code: 0
[2025-07-27 17:23:33] 2025-07-27 21:23:15,058 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 17:23:33] 2025-07-27 21:23:32,949 | INFO     | PID=3530 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 17:23:33] 2025-07-27 21:23:32,949 | INFO     | .. there are 2 such processes running
[2025-07-27 17:23:33] 2025-07-27 21:23:32,949 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 17:23:33] 2025-07-27 21:23:32,949 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 17:23:33] 2025-07-27 21:23:32,949 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 17:23:33] 2025-07-27 21:23:32,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 17:23:33] 2025-07-27 21:23:32,949 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 17:23:33] 2025-07-27 21:23:32,949 | INFO     | [monitor] control thread has ended
[2025-07-27 17:23:33] 2025-07-27 21:23:33,061 [wrapper] ==== pilot stdout END ====
[2025-07-27 17:23:33] 2025-07-27 21:23:33,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 17:23:33] 2025-07-27 21:23:33,068 [wrapper] pilotpid: 3530
[2025-07-27 17:23:33] 2025-07-27 21:23:33,072 [wrapper] Pilot exit status: 0
[2025-07-27 17:23:33] 2025-07-27 21:23:33,084 [wrapper] pandaids: 6747414794
[2025-07-27 17:23:33] 2025-07-27 21:23:33,119 [wrapper] cleanup supervisor_pilot 26209 3531
[2025-07-27 17:23:33] 2025-07-27 21:23:33,123 [wrapper] Test setup, not cleaning
[2025-07-27 17:23:33] 2025-07-27 21:23:33,127 [wrapper] apfmon messages muted
[2025-07-27 17:23:33] 2025-07-27 21:23:33,130 [wrapper] ==== wrapper stdout END ====
[2025-07-27 17:23:33] 2025-07-27 21:23:33,134 [wrapper] ==== wrapper stderr END ====
[2025-07-27 17:23:33]  *** Error codes and diagnostics ***
[2025-07-27 17:23:33]     "exeErrorCode": 0,
[2025-07-27 17:23:33]     "exeErrorDiag": "",
[2025-07-27 17:23:33]     "pilotErrorCode": 0,
[2025-07-27 17:23:33]     "pilotErrorDiag": "",
[2025-07-27 17:23:33]  *** Listing of results directory ***
[2025-07-27 17:23:33] total 348632
[2025-07-27 17:23:33] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 10:52 queuedata.json
[2025-07-27 17:23:33] -rwx------ 1 boincer umatlas     36292 Jul 27 10:53 runpilot2-wrapper.sh
[2025-07-27 17:23:33] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 10:53 pilot3.tar.gz
[2025-07-27 17:23:33] -rw-r--r-- 1 boincer umatlas       100 Jul 27 16:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 17:23:33] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 16:04 run_atlas
[2025-07-27 17:23:33] -rw-r--r-- 1 boincer umatlas       105 Jul 27 16:04 job.xml
[2025-07-27 17:23:33] -rw-r--r-- 2 boincer umatlas 142032762 Jul 27 16:04 EVNT.45743347._001933.pool.root.1
[2025-07-27 17:23:33] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 16:04 start_atlas.sh
[2025-07-27 17:23:33] drwxrwx--x 2 boincer umatlas      4096 Jul 27 16:04 shared
[2025-07-27 17:23:33] -rw-r--r-- 2 boincer umatlas    542901 Jul 27 16:04 input.tar.gz
[2025-07-27 17:23:33] -rw-r--r-- 1 boincer umatlas         0 Jul 27 16:04 boinc_lockfile
[2025-07-27 17:23:33] -rw-r--r-- 1 boincer umatlas      2563 Jul 27 16:04 pandaJob.out
[2025-07-27 17:23:33] -rw------- 1 boincer umatlas    980125 Jul 27 16:05 agis_schedconf.cvmfs.json
[2025-07-27 17:23:33] -rw------- 1 boincer umatlas   1593052 Jul 27 16:05 agis_ddmendpoints.agis.ALL.json
[2025-07-27 17:23:33] drwx------ 4 boincer umatlas      4096 Jul 27 16:05 pilot3
[2025-07-27 17:23:33] -rw-r--r-- 1 boincer umatlas      6048 Jul 27 17:20 init_data.xml
[2025-07-27 17:23:33] -rw------- 1 boincer umatlas 209555693 Jul 27 17:22 HITS.45743349._050328.pool.root.1
[2025-07-27 17:23:33] -rw-r--r-- 1 boincer umatlas       529 Jul 27 17:22 boinc_task_state.xml
[2025-07-27 17:23:33] -rw------- 1 boincer umatlas      1047 Jul 27 17:22 memory_monitor_summary.json
[2025-07-27 17:23:33] -rw------- 1 boincer umatlas    299768 Jul 27 17:22 log.45743349._050328.job.log.tgz.1
[2025-07-27 17:23:33] -rw------- 1 boincer umatlas      7830 Jul 27 17:23 heartbeat.json
[2025-07-27 17:23:33] -rw------- 1 boincer umatlas        95 Jul 27 17:23 pilot_heartbeat.json
[2025-07-27 17:23:33] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 17:23 boinc_mmap_file
[2025-07-27 17:23:33] -rw-r--r-- 1 boincer umatlas        27 Jul 27 17:23 wrapper_checkpoint.txt
[2025-07-27 17:23:33] -rw------- 1 boincer umatlas       889 Jul 27 17:23 pilotlog.txt
[2025-07-27 17:23:33] -rw------- 1 boincer umatlas    464943 Jul 27 17:23 log.45743349._050328.job.log.1
[2025-07-27 17:23:33] -rw------- 1 boincer umatlas       357 Jul 27 17:23 output.list
[2025-07-27 17:23:33] -rw-r--r-- 1 boincer umatlas       620 Jul 27 17:23 runtime_log
[2025-07-27 17:23:33] -rw------- 1 boincer umatlas    788480 Jul 27 17:23 result.tar.gz
[2025-07-27 17:23:33] -rw------- 1 boincer umatlas       658 Jul 27 17:23 tqfNDmZvH07n9Rq4apOajLDm4fhM0noT9bVof3QYDmnh2KDmvH28lm.diag
[2025-07-27 17:23:33] -rw-r--r-- 1 boincer umatlas      8660 Jul 27 17:23 runtime_log.err
[2025-07-27 17:23:33] -rw-r--r-- 1 boincer umatlas     21990 Jul 27 17:23 stderr.txt
[2025-07-27 17:23:33] HITS file was successfully produced:
[2025-07-27 17:23:33] -rw------- 1 boincer umatlas 209555693 Jul 27 17:22 shared/HITS.pool.root.1
[2025-07-27 17:23:33]  *** Contents of shared directory: ***
[2025-07-27 17:23:33] total 344676
[2025-07-27 17:23:33] -rw-r--r-- 2 boincer umatlas 142032762 Jul 27 16:04 ATLAS.root_0
[2025-07-27 17:23:33] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 16:04 start_atlas.sh
[2025-07-27 17:23:33] -rw-r--r-- 2 boincer umatlas    542901 Jul 27 16:04 input.tar.gz
[2025-07-27 17:23:33] -rw------- 1 boincer umatlas 209555693 Jul 27 17:22 HITS.pool.root.1
[2025-07-27 17:23:33] -rw------- 1 boincer umatlas    788480 Jul 27 17:23 result.tar.gz
17:23:34 (32196): run_atlas exited; CPU time 33946.763032
17:23:34 (32196): called boinc_finish(0)

</stderr_txt>
]]>

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