Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:40:17 (1518407): wrapper (7.7.26015): starting
17:40:17 (1518407): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 17:40:17] Arguments: --nthreads 12
[2025-07-27 17:40:17] Threads: 12
[2025-07-27 17:40:17] Checking for CVMFS
[2025-07-27 17:40:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:40:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:40:17] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:40:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:40:17] 2.13.1.0 5053 11305 198232 148825 3 387 31441159 40960000 9799 16776704 0 12808234 99.866 14701317 47914 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 17:40:17] CVMFS is ok
[2025-07-27 17:40:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:40:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:40:17] Further information can be found at the LHC@home message board.
[2025-07-27 17:40:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:40:17] Checking for apptainer binary...
[2025-07-27 17:40:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:40:17] Running /usr/bin/apptainer --version
[2025-07-27 17:40:17] apptainer version 1.4.1-1.el9
[2025-07-27 17:40:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:40:17] c-210-33-1.aglt2.org
[2025-07-27 17:40:17] apptainer works
[2025-07-27 17:40:17] Set ATHENA_PROC_NUMBER=12
[2025-07-27 17:40:17] Set ATHENA_CORE_NUMBER=12
[2025-07-27 17:40:17] Starting ATLAS job with PandaID=6744935393
[2025-07-27 17:40:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:08:00]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:08:00]  storage_token=
[2025-07-27 19:08:00]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6744935393/log.45743349._011238.job.log.tgz.1
[2025-07-27 19:08:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/63/8d/log.45743349._011238.job.log.tgz.1
[2025-07-27 19:08:00]  workdir=None
[2025-07-27 19:08:00] ]
[2025-07-27 19:08:00] 2025-07-27 23:07:13,658 | INFO     | transferring file log.45743349._011238.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6744935393/log.45743349._011238.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 19:08:00] 2025-07-27 23:07:13,658 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6744935393/log.45743349._011238.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._011238.job
[2025-07-27 19:08:00] 2025-07-27 23:07:13,679 | INFO     | adding to output.list: log.45743349._011238.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/63/8d/log.45743349._011238.job.log.tg
[2025-07-27 19:08:00] 2025-07-27 23:07:13,680 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 19:08:00] 2025-07-27 23:07:13,681 | INFO     | summary of transferred files:
[2025-07-27 19:08:00] 2025-07-27 23:07:13,681 | INFO     |  -- lfn=log.45743349._011238.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:08:00] 2025-07-27 23:07:13,681 | INFO     | stage-out finished correctly
[2025-07-27 19:08:00] 2025-07-27 23:07:13,703 | INFO     | monitor loop #379: job 0:6744935393 is in state 'finished'
[2025-07-27 19:08:00] 2025-07-27 23:07:13,714 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:08:00] 2025-07-27 23:07:16,235 | INFO     | monitor loop #380: job 0:6744935393 is in state 'finished'
[2025-07-27 19:08:00] 2025-07-27 23:07:16,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:08:00] 2025-07-27 23:07:16,493 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:08:00] 2025-07-27 23:07:18,647 | INFO     | job 6744935393 has state=finished
[2025-07-27 19:08:00] 2025-07-27 23:07:18,648 | INFO     | preparing for final server update for job 6744935393 in state='finished'
[2025-07-27 19:08:00] 2025-07-27 23:07:18,649 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:08:00] 2025-07-27 23:07:18,649 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:08:00] 2025-07-27 23:07:18,649 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:08:00] 2025-07-27 23:07:18,649 | INFO     | job 6744935393 has finished - writing final server update
[2025-07-27 19:08:00] 2025-07-27 23:07:18,650 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:08:00] 2025-07-27 23:07:18,652 | INFO     | executing command: lscpu
[2025-07-27 19:08:00] 2025-07-27 23:07:18,702 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:08:00] 2025-07-27 23:07:18,738 | INFO     | monitor loop #381: job 0:6744935393 is in state 'finished'
[2025-07-27 19:08:00] 2025-07-27 23:07:18,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:08:00] 2025-07-27 23:07:21,248 | INFO     | monitor loop #382: job 0:6744935393 is in state 'finished'
[2025-07-27 19:08:00] 2025-07-27 23:07:21,248 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:08:00] 2025-07-27 23:07:23,751 | INFO     | monitor loop #383: job 0:6744935393 is in state 'finished'
[2025-07-27 19:08:00] 2025-07-27 23:07:23,752 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:08:00] 2025-07-27 23:07:25,792 | INFO     | PID=1521996 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:08:00] 2025-07-27 23:07:25,793 | INFO     | .. there are 8 such processes running
[2025-07-27 19:08:00] 2025-07-27 23:07:26,257 | INFO     | monitor loop #384: job 0:6744935393 is in state 'finished'
[2025-07-27 19:08:00] 2025-07-27 23:07:26,257 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:08:00] 2025-07-27 23:07:26,788 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 19:08:00] 2025-07-27 23:07:26,799 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2462.518839285714
[2025-07-27 19:08:00] 2025-07-27 23:07:26,810 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744935393/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:08:00] 2025-07-27 23:07:26,811 | INFO     | extracted standard info from prmon json
[2025-07-27 19:08:00] 2025-07-27 23:07:26,811 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:08:00] 2025-07-27 23:07:26,811 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:08:00] 2025-07-27 23:07:26,811 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:08:00] 2025-07-27 23:07:26,812 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:08:00] 2025-07-27 23:07:26,814 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:08:00] 2025-07-27 23:07:26,814 | INFO     | sum of square deviations: 147131057.38461536
[2025-07-27 19:08:00] 2025-07-27 23:07:26,815 | INFO     | sum of deviations: -11604839303.307701
[2025-07-27 19:08:00] 2025-07-27 23:07:26,815 | INFO     | mean x: 1753655108.5384614
[2025-07-27 19:08:00] 2025-07-27 23:07:26,815 | INFO     | mean y: 2844069.935897436
[2025-07-27 19:08:00] 2025-07-27 23:07:26,815 | INFO     | -- intersect: 138320926531.71152
[2025-07-27 19:08:00] 2025-07-27 23:07:26,816 | INFO     | intersect: 138320926531.71152
[2025-07-27 19:08:00] 2025-07-27 23:07:26,816 | INFO     | chi2: 0.1333744473301105
[2025-07-27 19:08:00] 2025-07-27 23:07:26,816 | INFO     | -- intersect: 138320926531.71152
[2025-07-27 19:08:00] 2025-07-27 23:07:26,816 | INFO     | current memory leak: -78.87 B/s (using 78 data points, chi2=0.13)
[2025-07-27 19:08:00] 2025-07-27 23:07:26,817 | INFO     | could have reported an average CPU frequency of 2581 MHz (6 samples)
[2025-07-27 19:08:00] 2025-07-27 23:07:26,817 | INFO     | ..............................
[2025-07-27 19:08:00] 2025-07-27 23:07:26,817 | INFO     | . Timing measurements:
[2025-07-27 19:08:00] 2025-07-27 23:07:26,817 | INFO     | . get job = 0 s
[2025-07-27 19:08:00] 2025-07-27 23:07:26,817 | INFO     | . initial setup = 2 s
[2025-07-27 19:08:00] 2025-07-27 23:07:26,817 | INFO     | . payload setup = 6 s
[2025-07-27 19:08:00] 2025-07-27 23:07:26,817 | INFO     | . stage-in = 0 s
[2025-07-27 19:08:00] 2025-07-27 23:07:26,817 | INFO     | . payload execution = 5178 s
[2025-07-27 19:08:00] 2025-07-27 23:07:26,817 | INFO     | . stage-out = 0 s
[2025-07-27 19:08:00] 2025-07-27 23:07:26,817 | INFO     | . log creation = 0 s
[2025-07-27 19:08:00] 2025-07-27 23:07:26,818 | INFO     | ..............................
[2025-07-27 19:08:00] 2025-07-27 23:07:26,911 | INFO     | 
[2025-07-27 19:08:00] 2025-07-27 23:07:26,911 | INFO     | job summary report
[2025-07-27 19:08:00] 2025-07-27 23:07:26,912 | INFO     | --------------------------------------------------
[2025-07-27 19:08:00] 2025-07-27 23:07:26,912 | INFO     | PanDA job id: 6744935393
[2025-07-27 19:08:00] 2025-07-27 23:07:26,912 | INFO     | task id: 45743349
[2025-07-27 19:08:00] 2025-07-27 23:07:26,912 | INFO     | errors: (none)
[2025-07-27 19:08:00] 2025-07-27 23:07:26,912 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:08:00] 2025-07-27 23:07:26,912 | INFO     | pilot state: finished 
[2025-07-27 19:08:00] 2025-07-27 23:07:26,912 | INFO     | transexitcode: 0
[2025-07-27 19:08:00] 2025-07-27 23:07:26,912 | INFO     | exeerrorcode: 0
[2025-07-27 19:08:00] 2025-07-27 23:07:26,912 | INFO     | exeerrordiag: 
[2025-07-27 19:08:00] 2025-07-27 23:07:26,912 | INFO     | exitcode: 0
[2025-07-27 19:08:00] 2025-07-27 23:07:26,913 | INFO     | exitmsg: OK
[2025-07-27 19:08:00] 2025-07-27 23:07:26,913 | INFO     | cpuconsumptiontime: 49953 s
[2025-07-27 19:08:00] 2025-07-27 23:07:26,913 | INFO     | nevents: 400
[2025-07-27 19:08:00] 2025-07-27 23:07:26,913 | INFO     | neventsw: 0
[2025-07-27 19:08:00] 2025-07-27 23:07:26,913 | INFO     | pid: 1528383
[2025-07-27 19:08:00] 2025-07-27 23:07:26,913 | INFO     | pgrp: 1528383
[2025-07-27 19:08:00] 2025-07-27 23:07:26,913 | INFO     | corecount: 12
[2025-07-27 19:08:00] 2025-07-27 23:07:26,913 | INFO     | event service: False
[2025-07-27 19:08:00] 2025-07-27 23:07:26,913 | INFO     | sizes: {0: 2397302, 1: 2397501, 5: 2397763, 12: 2397819, 5189: 2424237, 5190: 2433235, 5192: 2433419, 5203: 2433613}
[2025-07-27 19:08:00] 2025-07-27 23:07:26,913 | INFO     | --------------------------------------------------
[2025-07-27 19:08:00] 2025-07-27 23:07:26,913 | INFO     | 
[2025-07-27 19:08:00] 2025-07-27 23:07:26,914 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 19:08:00] 2025-07-27 23:07:26,939 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,939 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,939 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,939 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,939 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,940 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,940 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,940 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,940 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,940 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,940 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,940 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,940 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,940 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,940 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,940 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,940 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,941 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:08:00] 2025-07-27 23:07:26,941 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,941 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:08:00] 2025-07-27 23:07:26,941 | INFO     | job 6744935393 has completed (purged errors)
[2025-07-27 19:08:00] 2025-07-27 23:07:26,941 | INFO     | overall cleanup function is called
[2025-07-27 19:08:00] 2025-07-27 23:07:27,949 | INFO     | --- collectZombieJob: --- 10, [1528383]
[2025-07-27 19:08:00] 2025-07-27 23:07:27,949 | INFO     | zombie collector waiting for pid 1528383
[2025-07-27 19:08:00] 2025-07-27 23:07:27,949 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:08:00] 2025-07-27 23:07:27,950 | INFO     | collected zombie processes
[2025-07-27 19:08:00] 2025-07-27 23:07:27,950 | INFO     | will attempt to kill all subprocesses of pid=1528383
[2025-07-27 19:08:00] 2025-07-27 23:07:28,244 | INFO     | process IDs to be killed: [1528383] (in reverse order)
[2025-07-27 19:08:00] 2025-07-27 23:07:28,328 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:08:00] 2025-07-27 23:07:28,329 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:08:00] 2025-07-27 23:07:28,341 | INFO     | did not find any defunct processes belonging to 1528383
[2025-07-27 19:08:00] 2025-07-27 23:07:28,356 | INFO     | did not find any defunct processes belonging to 1528383
[2025-07-27 19:08:00] 2025-07-27 23:07:28,356 | INFO     | ready for new job
[2025-07-27 19:08:00] 2025-07-27 23:07:28,356 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:08:00] 2025-07-27 23:07:28,358 | INFO     | ***************************************
[2025-07-27 19:08:00] 2025-07-27 23:07:28,358 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:08:00] 2025-07-27 23:07:28,358 | INFO     | ***************************************
[2025-07-27 19:08:00] 2025-07-27 23:07:28,358 | INFO     | 
[2025-07-27 19:08:00] 2025-07-27 23:07:28,362 | INFO     | architecture information:
[2025-07-27 19:08:00] 2025-07-27 23:07:28,362 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:08:00] 2025-07-27 23:07:28,384 | INFO     | cat /etc/os-release:
[2025-07-27 19:08:00] NAME="CentOS Linux"
[2025-07-27 19:08:00] VERSION="7 (Core)"
[2025-07-27 19:08:00] ID="centos"
[2025-07-27 19:08:00] ID_LIKE="rhel fedora"
[2025-07-27 19:08:00] VERSION_ID="7"
[2025-07-27 19:08:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:08:00] ANSI_COLOR="0;31"
[2025-07-27 19:08:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:08:00] HOME_URL="https://www.centos.org/"
[2025-07-27 19:08:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:08:00] 
[2025-07-27 19:08:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:08:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:08:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:08:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:08:00] 
[2025-07-27 19:08:00] 2025-07-27 23:07:28,384 | INFO     | ***************************************
[2025-07-27 19:08:00] 2025-07-27 23:07:28,887 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 19:08:00] 2025-07-27 23:07:28,908 | INFO     | sufficient remaining disk space (75353817088 B)
[2025-07-27 19:08:00] 2025-07-27 23:07:28,908 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:08:00] 2025-07-27 23:07:28,909 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:08:00] 2025-07-27 23:07:28,909 | INFO     | update_server=False
[2025-07-27 19:08:00] 2025-07-27 23:07:28,909 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:08:00] 2025-07-27 23:07:28,909 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:08:00] 2025-07-27 23:07:29,180 | INFO     | all payload control threads have been joined
[2025-07-27 19:08:00] 2025-07-27 23:07:29,209 | INFO     | all data control threads have been joined
[2025-07-27 19:08:00] 2025-07-27 23:07:29,330 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:08:00] 2025-07-27 23:07:29,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:08:00] 2025-07-27 23:07:29,767 | INFO     | aborting loop
[2025-07-27 19:08:00] 2025-07-27 23:07:29,792 | INFO     | all job control threads have been joined
[2025-07-27 19:08:00] 2025-07-27 23:07:29,914 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:08:00] 2025-07-27 23:07:29,915 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:08:00] 2025-07-27 23:07:29,915 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:08:00] 2025-07-27 23:07:30,186 | INFO     | [payload] control thread has finished
[2025-07-27 19:08:00] 2025-07-27 23:07:30,214 | INFO     | [data] control thread has finished
[2025-07-27 19:08:00] 2025-07-27 23:07:30,336 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:08:00] 2025-07-27 23:07:30,382 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:08:00] 2025-07-27 23:07:30,615 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:08:00] 2025-07-27 23:07:30,772 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:08:00] 2025-07-27 23:07:30,798 | INFO     | [job] control thread has finished
[2025-07-27 19:08:00] 2025-07-27 23:07:30,865 | INFO     | [job] validate thread has finished
[2025-07-27 19:08:00] 2025-07-27 23:07:30,954 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:08:00] 2025-07-27 23:07:31,336 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:08:00] 2025-07-27 23:07:31,512 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:08:00] 2025-07-27 23:07:31,629 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:08:00] 2025-07-27 23:07:35,635 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:08:00] 2025-07-27 23:07:39,693 | INFO     | job.realtimelogging is not enabled
[2025-07-27 19:08:00] 2025-07-27 23:07:40,699 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:08:00] 2025-07-27 23:07:41,081 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139891393480512)>', '<ExcThread(monitor, started 139890759030528)>']
[2025-07-27 19:08:00] 2025-07-27 23:07:46,105 | INFO     | all workflow threads have been joined
[2025-07-27 19:08:00] 2025-07-27 23:07:46,106 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:08:00] 2025-07-27 23:07:46,106 | INFO     | traces error code: 0
[2025-07-27 19:08:00] 2025-07-27 23:07:46,107 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:08:00] 2025-07-27 23:08:00,128 | INFO     | PID=1521996 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:08:00] 2025-07-27 23:08:00,129 | INFO     | .. there are 8 such processes running
[2025-07-27 19:08:00] 2025-07-27 23:08:00,129 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:08:00] 2025-07-27 23:08:00,129 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:08:00] 2025-07-27 23:08:00,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:08:00] 2025-07-27 23:08:00,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:08:00] 2025-07-27 23:08:00,129 | INFO     | [monitor] control thread has ended
[2025-07-27 19:08:00] 2025-07-27 23:08:00,345 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:08:00] 2025-07-27 23:08:00,349 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:08:00] 2025-07-27 23:08:00,354 [wrapper] pilotpid: 1521996
[2025-07-27 19:08:00] 2025-07-27 23:08:00,359 [wrapper] Pilot exit status: 0
[2025-07-27 19:08:00] 2025-07-27 23:08:00,377 [wrapper] pandaids: 6744935393
[2025-07-27 19:08:00] 2025-07-27 23:08:00,438 [wrapper] cleanup supervisor_pilot 1618110 1521997
[2025-07-27 19:08:00] 2025-07-27 23:08:00,445 [wrapper] Test setup, not cleaning
[2025-07-27 19:08:00] 2025-07-27 23:08:00,449 [wrapper] apfmon messages muted
[2025-07-27 19:08:00] 2025-07-27 23:08:00,453 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:08:00] 2025-07-27 23:08:00,457 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:08:00]  *** Error codes and diagnostics ***
[2025-07-27 19:08:00]     "exeErrorCode": 0,
[2025-07-27 19:08:00]     "exeErrorDiag": "",
[2025-07-27 19:08:00]     "pilotErrorCode": 0,
[2025-07-27 19:08:00]     "pilotErrorDiag": "",
[2025-07-27 19:08:00]  *** Listing of results directory ***
[2025-07-27 19:08:00] total 439456
[2025-07-27 19:08:00] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 18:04 pilot3.tar.gz
[2025-07-27 19:08:00] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 18:08 queuedata.json
[2025-07-27 19:08:00] -rwx------. 1 boincer umatlas     36292 Jul 24 18:08 runpilot2-wrapper.sh
[2025-07-27 19:08:00] -rw-r--r--. 1 boincer umatlas       100 Jul 27 17:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:08:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 17:40 run_atlas
[2025-07-27 19:08:00] -rw-r--r--. 1 boincer umatlas       105 Jul 27 17:40 job.xml
[2025-07-27 19:08:00] -rw-r--r--. 2 boincer umatlas 229863412 Jul 27 17:40 EVNT.45743347._000618.pool.root.1
[2025-07-27 19:08:00] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:40 start_atlas.sh
[2025-07-27 19:08:00] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 17:40 shared
[2025-07-27 19:08:00] -rw-r--r--. 2 boincer umatlas    542882 Jul 27 17:40 input.tar.gz
[2025-07-27 19:08:00] -rw-r--r--. 1 boincer umatlas         0 Jul 27 17:40 boinc_lockfile
[2025-07-27 19:08:00] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 17:40 pandaJob.out
[2025-07-27 19:08:00] -rw-------. 1 boincer umatlas    980117 Jul 27 17:40 agis_schedconf.cvmfs.json
[2025-07-27 19:08:00] -rw-------. 1 boincer umatlas   1593052 Jul 27 17:40 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:08:00] drwx------. 4 boincer umatlas      4096 Jul 27 17:40 pilot3
[2025-07-27 19:08:00] -rw-r--r--. 1 boincer umatlas      6840 Jul 27 19:01 init_data.xml
[2025-07-27 19:08:00] -rw-------. 1 boincer umatlas 214522753 Jul 27 19:06 HITS.45743349._011238.pool.root.1
[2025-07-27 19:08:00] -rw-r--r--. 1 boincer umatlas       529 Jul 27 19:06 boinc_task_state.xml
[2025-07-27 19:08:00] -rw-------. 1 boincer umatlas        95 Jul 27 19:07 pilot_heartbeat.json
[2025-07-27 19:08:00] -rw-------. 1 boincer umatlas      1034 Jul 27 19:07 memory_monitor_summary.json
[2025-07-27 19:08:00] -rw-------. 1 boincer umatlas    366397 Jul 27 19:07 log.45743349._011238.job.log.tgz.1
[2025-07-27 19:08:00] -rw-------. 1 boincer umatlas      7822 Jul 27 19:07 heartbeat.json
[2025-07-27 19:08:00] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:07 wrapper_checkpoint.txt
[2025-07-27 19:08:00] -rw-------. 1 boincer umatlas       822 Jul 27 19:08 pilotlog.txt
[2025-07-27 19:08:00] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:08 boinc_mmap_file
[2025-07-27 19:08:00] -rw-------. 1 boincer umatlas    505337 Jul 27 19:08 log.45743349._011238.job.log.1
[2025-07-27 19:08:00] -rw-------. 1 boincer umatlas       357 Jul 27 19:08 output.list
[2025-07-27 19:08:00] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:08 runtime_log
[2025-07-27 19:08:00] -rw-------. 1 boincer umatlas    890880 Jul 27 19:08 result.tar.gz
[2025-07-27 19:08:00] -rw-------. 1 boincer umatlas       655 Jul 27 19:08 Su9MDmBIJz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNwNLDmrHmbon.diag
[2025-07-27 19:08:00] -rw-r--r--. 1 boincer umatlas      8672 Jul 27 19:08 runtime_log.err
[2025-07-27 19:08:00] -rw-r--r--. 1 boincer umatlas     22345 Jul 27 19:08 stderr.txt
[2025-07-27 19:08:00] HITS file was successfully produced:
[2025-07-27 19:08:00] -rw-------. 1 boincer umatlas 214522753 Jul 27 19:06 shared/HITS.pool.root.1
[2025-07-27 19:08:00]  *** Contents of shared directory: ***
[2025-07-27 19:08:00] total 435396
[2025-07-27 19:08:00] -rw-r--r--. 2 boincer umatlas 229863412 Jul 27 17:40 ATLAS.root_0
[2025-07-27 19:08:00] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:40 start_atlas.sh
[2025-07-27 19:08:00] -rw-r--r--. 2 boincer umatlas    542882 Jul 27 17:40 input.tar.gz
[2025-07-27 19:08:00] -rw-------. 1 boincer umatlas 214522753 Jul 27 19:06 HITS.pool.root.1
[2025-07-27 19:08:00] -rw-------. 1 boincer umatlas    890880 Jul 27 19:08 result.tar.gz
19:08:01 (1518407): run_atlas exited; CPU time 50039.312665
19:08:01 (1518407): called boinc_finish(0)

</stderr_txt>
]]>

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