Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-27 16:52:52 (28631): Detected: vboxwrapper 26206
2025-07-27 16:52:52 (28631): Detected: BOINC client v7.9.3
2025-07-27 16:52:53 (28631): Detected: VirtualBox VboxManage Interface (Version: 6.0.8)
2025-07-27 16:52:54 (28631): Successfully copied 'init_data.xml' to the shared directory.
2025-07-27 16:52:54 (28631): Create VM. (boinc_1c1a767f8a694ba7, slot#5)
2025-07-27 16:52:55 (28631): Setting Memory Size for VM. (4600MB)
2025-07-27 16:52:56 (28631): Setting CPU Count for VM. (6)
2025-07-27 16:52:57 (28631): Setting Chipset Options for VM.
2025-07-27 16:52:58 (28631): Setting Graphics Controller Options for VM.
2025-07-27 16:52:59 (28631): Setting Boot Options for VM.
2025-07-27 16:53:00 (28631): Setting Network Configuration for NAT.
2025-07-27 16:53:01 (28631): Enabling VM Network Access.
2025-07-27 16:53:02 (28631): Disabling USB Support for VM.
2025-07-27 16:53:03 (28631): Disabling COM Port Support for VM.
2025-07-27 16:53:04 (28631): Disabling LPT Port Support for VM.
2025-07-27 16:53:04 (28631): Disabling Audio Support for VM.
2025-07-27 16:53:05 (28631): Disabling Clipboard Support for VM.
2025-07-27 16:53:06 (28631): Disabling Drag and Drop Support for VM.
2025-07-27 16:53:07 (28631): Adding storage controller(s) to VM.
2025-07-27 16:53:08 (28631): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-27 16:53:11 (28631): Adding VirtualBox Guest Additions to VM.
2025-07-27 16:53:12 (28631): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-27 16:53:13 (28631): forwarding host port 54563 to guest port 80
2025-07-27 16:53:14 (28631): Enabling remote desktop for VM.
2025-07-27 16:53:14 (28631): Required extension pack not installed, remote desktop not enabled.
2025-07-27 16:53:14 (28631): Enabling shared directory for VM.
2025-07-27 16:53:18 (28631): Starting VM using VBoxManage interface. (boinc_1c1a767f8a694ba7, slot#5)
2025-07-27 16:53:25 (28631): Successfully started VM. (PID = '29144')
2025-07-27 16:53:25 (28631): Reporting VM Process ID to BOINC.
2025-07-27 16:53:25 (28631): Guest Log: BIOS: VirtualBox 6.0.8
2025-07-27 16:53:25 (28631): Guest Log: CPUID EDX: 0x178bfbff
2025-07-27 16:53:25 (28631): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-27 16:53:25 (28631): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-27 16:53:25 (28631): Detected: Web Application Enabled (http://localhost:54563)
2025-07-27 16:53:25 (28631): Preference change detected
2025-07-27 16:53:25 (28631): Setting CPU throttle for VM. (100%)
2025-07-27 16:53:26 (28631): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-27 16:53:27 (28631): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-27 16:53:27 (28631): Guest Log: BIOS: Booting from Hard Disk...
2025-07-27 16:53:45 (28631): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-27 16:53:45 (28631): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-27 16:53:45 (28631): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-27 16:53:55 (28631): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-27 16:53:55 (28631): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-27 16:54:01 (28631): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-27 16:54:01 (28631): Guest Log: 00:00:00.000130 main     Log opened 2025-07-27T20:53:59.562220000Z
2025-07-27 16:54:01 (28631): Guest Log: 00:00:00.000201 main     OS Product: Linux
2025-07-27 16:54:01 (28631): Guest Log: 00:00:00.000223 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-27 16:54:01 (28631): Guest Log: 00:00:00.000240 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-27 16:54:01 (28631): Guest Log: 00:00:00.000257 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-27 16:54:01 (28631): Guest Log: 00:00:00.000257 main     Process ID: 1325
2025-07-27 16:54:01 (28631): Guest Log: 00:00:00.000258 main     Package type: LINUX_64BITS_GENERIC
2025-07-27 16:54:01 (28631): Guest Log: 00:00:00.001589 main     5.2.32 r132073 started. Verbose level = 0
2025-07-27 16:54:01 (28631): Guest Log: 00:00:00.002335 main     Error: Service 'control' failed to initialize: VERR_INVALID_FUNCTION
2025-07-27 16:54:01 (28631): Guest Log: 00:00:00.002426 main     Session 0 is about to close ...
2025-07-27 16:54:01 (28631): Guest Log: 00:00:00.002447 main     Stopping all guest processes ...
2025-07-27 16:54:01 (28631): Guest Log: 00:00:00.002465 main     Closing all guest files ...
2025-07-27 16:54:01 (28631): Guest Log: 00:00:00.002598 main     Ended.
2025-07-27 16:54:01 (28631): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-27 16:54:01 (28631): Guest Log: [INFO] Mounting shared directory
2025-07-27 16:54:01 (28631): Guest Log: [INFO] Checking for init_data.xml
2025-07-27 16:54:07 (28631): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-27 16:54:07 (28631): Guest Log: [INFO] Detected branch: prod
2025-07-27 16:54:08 (28631): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-27 16:54:08 (28631): Guest Log: Copying input files
2025-07-27 16:54:09 (28631): Guest Log: Copied input files into RunAtlas.
2025-07-27 16:54:09 (28631): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-27 16:54:09 (28631): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-27 16:54:09 (28631): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-27 16:54:09 (28631): Guest Log: Further information can be found at the LHC@home message board.
2025-07-27 16:54:20 (28631): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-27 16:54:20 (28631): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-27 16:54:20 (28631): Guest Log: 2.6.3.0 1618 0 30188 148823 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-27 16:54:21 (28631): Guest Log: copied the webapp to /var/www
2025-07-27 16:54:21 (28631): Guest Log: ATHENA_PROC_NUMBER=6
2025-07-27 16:54:21 (28631): Guest Log: ATHENA_CORE_NUMBER=6
2025-07-27 16:54:22 (28631): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-27 16:54:22 (28631): Guest Log:  *** Starting ATLAS job. (PandaID=6747413445 taskID=45743349) ***
2025-07-27 18:32:35 (28631): Status Report: Elapsed Time: '6000.000000'
2025-07-27 18:32:35 (28631): Status Report: CPU Time: '27183.810000'
2025-07-27 19:37:58 (28631): Guest Log:  *** Job finished ***
2025-07-27 19:37:58 (28631): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:45,403 | INFO     | [payload] failed_post thread has finished
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:46,221 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:50,248 | INFO     | [data] queue_monitor thread has finished
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:51,293 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140574677104448)>', '<ExcThread(monitor, started 140573851764480)>']
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:51,950 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:51,951 | INFO     | [monitor] control thread has ended
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:56,307 | INFO     | all workflow threads have been joined
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:56,307 | INFO     | end of generic workflow (traces error code: 0)
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:56,308 | INFO     | traces error code: 0
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:56,308 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:56,383 [wrapper] ==== pilot stdout END ====
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:56,389 [wrapper] ==== wrapper stdout RESUME ====
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:56,394 [wrapper] pilotpid: 5942
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:56,399 [wrapper] Pilot exit status: 0
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:56,652 [wrapper] pandaids: 6747413445
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:56,687 [wrapper] cleanup supervisor_pilot  8042 5943
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:56,692 [wrapper] Test setup, not cleaning
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:56,698 [wrapper] apfmon messages muted
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:56,703 [wrapper] ==== wrapper stdout END ====
2025-07-27 19:37:58 (28631): Guest Log: 2025-07-27 23:37:56,708 [wrapper] ==== wrapper stderr END ====
2025-07-27 19:37:58 (28631): Guest Log:  *** Error codes and diagnostics ***
2025-07-27 19:37:58 (28631): Guest Log:     "exeErrorCode": 0,
2025-07-27 19:37:58 (28631): Guest Log:     "exeErrorDiag": "",
2025-07-27 19:37:58 (28631): Guest Log:     "pilotErrorCode": 0,
2025-07-27 19:37:58 (28631): Guest Log:     "pilotErrorDiag": "",
2025-07-27 19:37:58 (28631): Guest Log:  *** Listing of results directory ***
2025-07-27 19:37:58 (28631): Guest Log: total 211748
2025-07-27 19:37:58 (28631): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 27 14:41 pilot3.tar.gz
2025-07-27 19:37:58 (28631): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 27 14:44 queuedata.json
2025-07-27 19:37:58 (28631): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 27 14:47 runpilot2-wrapper.sh
2025-07-27 19:37:58 (28631): Guest Log: -rw-r--r--. 1 atlas atlas      8703 Jul 27 20:54 init_data.xml
2025-07-27 19:37:58 (28631): Guest Log: -rw-r--r--. 1 atlas atlas    542894 Jul 27 20:54 input.tar.gz
2025-07-27 19:37:58 (28631): Guest Log: -rw-r--r--. 1 atlas atlas     15095 Jul 27 20:54 start_atlas.sh
2025-07-27 19:37:58 (28631): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 27 20:54 EVNT.45743347._002796.pool.root.1 -> /data/./ATLAS.root_0
2025-07-27 19:37:58 (28631): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Jul 27 20:54 pandaJob.out
2025-07-27 19:37:58 (28631): Guest Log: -rw-------. 1 atlas atlas    980109 Jul 27 20:55 agis_schedconf.cvmfs.json
2025-07-27 19:37:58 (28631): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 27 20:55 agis_ddmendpoints.agis.ALL.json
2025-07-27 19:37:58 (28631): Guest Log: drwx------. 4 atlas atlas      4096 Jul 27 20:55 pilot3
2025-07-27 19:37:58 (28631): Guest Log: -rw-------. 1 atlas atlas 210768797 Jul 27 23:36 HITS.45743349._050219.pool.root.1
2025-07-27 19:37:58 (28631): Guest Log: -rw-------. 1 atlas atlas        95 Jul 27 23:37 pilot_heartbeat.json
2025-07-27 19:37:58 (28631): Guest Log: -rw-------. 1 atlas atlas      1032 Jul 27 23:37 memory_monitor_summary.json
2025-07-27 19:37:58 (28631): Guest Log: -rw-------. 1 atlas atlas    310814 Jul 27 23:37 log.45743349._050219.job.log.tgz.1
2025-07-27 19:37:58 (28631): Guest Log: -rw-------. 1 atlas atlas      7820 Jul 27 23:37 heartbeat.json
2025-07-27 19:37:58 (28631): Guest Log: -rw-------. 1 atlas atlas      4540 Jul 27 23:37 pilotlog.txt
2025-07-27 19:37:58 (28631): Guest Log: -rw-------. 1 atlas atlas    812055 Jul 27 23:37 log.45743349._050219.job.log.1
2025-07-27 19:37:58 (28631): Guest Log: -rw-------. 1 atlas atlas       357 Jul 27 23:37 output.list
2025-07-27 19:37:58 (28631): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 27 23:37 runtime_log
2025-07-27 19:37:58 (28631): Guest Log: -rw-------. 1 atlas atlas   1146880 Jul 27 23:37 result.tar.gz
2025-07-27 19:37:58 (28631): Guest Log: -rw-r--r--. 1 atlas atlas      8590 Jul 27 23:37 runtime_log.err
2025-07-27 19:37:58 (28631): Guest Log: -rw-------. 1 atlas atlas       654 Jul 27 23:37 dHTLDmKqH07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCaVLDmg5Lihn.diag
2025-07-27 19:37:58 (28631): Guest Log: Looking for outputfile HITS.45743349._050219.pool.root.1
2025-07-27 19:37:58 (28631): Guest Log: HITS file was successfully produced
2025-07-27 19:37:58 (28631): Guest Log: -rw-------. 1 atlas atlas 210768797 Jul 27 23:36 /home/atlas/RunAtlas/HITS.45743349._050219.pool.root.1
2025-07-27 19:37:58 (28631): Guest Log: Successfully finished the ATLAS job!
2025-07-27 19:37:58 (28631): Guest Log: Copying the results back to the shared directory!
2025-07-27 19:37:58 (28631): Guest Log:  *** Contents of shared directory: ***
2025-07-27 19:37:58 (28631): Guest Log: total 144432
2025-07-27 19:37:58 (28631): Guest Log: -rw-r--r--. 1 root root 146172779 Jul 27 20:52 ATLAS.root_0
2025-07-27 19:37:58 (28631): Guest Log: -rw-r--r--. 1 root root      8703 Jul 27 20:52 init_data.xml
2025-07-27 19:37:58 (28631): Guest Log: -rw-r--r--. 1 root root    542894 Jul 27 20:52 input.tar.gz
2025-07-27 19:37:58 (28631): Guest Log: -rw-r--r--. 1 root root   1146880 Jul 27  2025 result.tar.gz
2025-07-27 19:37:58 (28631): Guest Log: -rw-r--r--. 1 root root     15095 Jul 27 20:52 start_atlas.sh
2025-07-27 19:37:58 (28631): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-27 19:37:58 (28631): VM Completion File Detected.
2025-07-27 19:37:58 (28631): Powering off VM.
2025-07-27 19:37:59 (28631): Successfully stopped VM.
2025-07-27 19:37:59 (28631): Deregistering VM. (boinc_1c1a767f8a694ba7, slot#5)
2025-07-27 19:37:59 (28631): Removing network bandwidth throttle group from VM.
2025-07-27 19:37:59 (28631): Removing VM from VirtualBox.
19:38:04 (28631): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN